Metagenome / Metatranscriptome Family F081639

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081639
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	70 residues
Representative Sequence	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAQEENANFAVK
Number of Associated Samples	82
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.35 %
% of genes near scaffold ends (potentially truncated)	17.54 %
% of genes from short scaffolds (< 2000 bps)	77.19 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.439 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.684 % of family members)
Environment Ontology (ENVO)	Unclassified (28.947 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.06% β-sheet: 0.00% Coil/Unstructured: 46.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF05589	DUF768	8.77
PF04964	Flp_Fap	8.77
PF03401	TctC	7.89
PF01408	GFO_IDH_MocA	3.51
PF04392	ABC_sub_bind	1.75
PF00400	WD40	1.75
PF01494	FAD_binding_3	1.75
PF03924	CHASE	1.75
PF02129	Peptidase_S15	0.88
PF06026	Rib_5-P_isom_A	0.88
PF01479	S4	0.88
PF00296	Bac_luciferase	0.88
PF13469	Sulfotransfer_3	0.88
PF09140	MipZ	0.88
PF01872	RibD_C	0.88
PF00881	Nitroreductase	0.88
PF00857	Isochorismatase	0.88
PF13557	Phenol_MetA_deg	0.88
PF02894	GFO_IDH_MocA_C	0.88
PF13518	HTH_28	0.88
PF12796	Ank_2	0.88
PF01522	Polysacc_deac_1	0.88
PF09933	DUF2165	0.88
PF01636	APH	0.88
PF01042	Ribonuc_L-PSP	0.88
PF00440	TetR_N	0.88
PF06627	DUF1153	0.88
PF14437	MafB19-deam	0.88
PF13458	Peripla_BP_6	0.88
PF00072	Response_reg	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	8.77
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	7.89
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.51
COG3614	Extracytoplasmic sensor domain CHASE1 (specificity unknown)	Signal transduction mechanisms [T]	1.75
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.75
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.75
COG3452	Extracellular (periplasmic) sensor domain CHASE (specificity unknown)	Signal transduction mechanisms [T]	1.75
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.75
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.88
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.88
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.88
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.44 %
Unclassified	root	N/A	23.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.54 %
Unclassified	root	N/A	23.68 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.14 %
Unclassified	root	N/A	23.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.02 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	28.95 %
Unclassified	root	N/A	23.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.79 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	7.02 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	28.95 %
Unclassified	root	N/A	23.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.02 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.14 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.88 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	28.95 %
Unclassified	root	N/A	23.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.02 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.39 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	28.95 %
Unclassified	root	N/A	23.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.02 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	28.95 %
Unclassified	root	N/A	23.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.02 %
Bradyrhizobium sp. dw_411	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_411	0.88 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10102412	Not Available	1242	Open in IMG/M
3300001593\|JGI12635J15846_10409276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300001593\|JGI12635J15846_10624349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300002245\|JGIcombinedJ26739_101128846	Not Available	671	Open in IMG/M
3300003505\|JGIcombinedJ51221_10473266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300004080\|Ga0062385_10113132	Not Available	1338	Open in IMG/M
3300004082\|Ga0062384_100045609	All Organisms → cellular organisms → Bacteria → Proteobacteria	2088	Open in IMG/M
3300004091\|Ga0062387_100062070	Not Available	1849	Open in IMG/M
3300004635\|Ga0062388_100737320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300005591\|Ga0070761_10020922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3642	Open in IMG/M
3300005591\|Ga0070761_10474177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300005602\|Ga0070762_10017798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3666	Open in IMG/M
3300005602\|Ga0070762_10432952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300006059\|Ga0075017_100147361	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1674	Open in IMG/M
3300006059\|Ga0075017_100329081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300006174\|Ga0075014_100410165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300006176\|Ga0070765_100020947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4888	Open in IMG/M
3300006176\|Ga0070765_100557217	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300006176\|Ga0070765_101308390	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300006176\|Ga0070765_102031189	Not Available	537	Open in IMG/M
3300006354\|Ga0075021_10717984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300006893\|Ga0073928_10335299	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300006893\|Ga0073928_10798104	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300006893\|Ga0073928_11028530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300009520\|Ga0116214_1168297	Not Available	819	Open in IMG/M
3300009521\|Ga0116222_1244257	Not Available	774	Open in IMG/M
3300009522\|Ga0116218_1338289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300009523\|Ga0116221_1044682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2099	Open in IMG/M
3300009523\|Ga0116221_1504246	Not Available	530	Open in IMG/M
3300009525\|Ga0116220_10407086	Not Available	609	Open in IMG/M
3300010379\|Ga0136449_104020526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010379\|Ga0136449_104121753	Not Available	540	Open in IMG/M
3300011120\|Ga0150983_11250434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300011120\|Ga0150983_14636329	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300014165\|Ga0181523_10530857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300014489\|Ga0182018_10044808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2734	Open in IMG/M
3300014489\|Ga0182018_10342021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300014492\|Ga0182013_10000028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	161731	Open in IMG/M
3300014493\|Ga0182016_10054786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3073	Open in IMG/M
3300014501\|Ga0182024_10098552	Not Available	4267	Open in IMG/M
3300014501\|Ga0182024_10106660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4057	Open in IMG/M
3300014501\|Ga0182024_12703451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300014654\|Ga0181525_10525587	Not Available	656	Open in IMG/M
3300017933\|Ga0187801_10191576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300017948\|Ga0187847_10095751	Not Available	1641	Open in IMG/M
3300017948\|Ga0187847_10821847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300017970\|Ga0187783_10257049	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300018042\|Ga0187871_10049006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. dw_411	2549	Open in IMG/M
3300018042\|Ga0187871_10667896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300018046\|Ga0187851_10521099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300019888\|Ga0193751_1053351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1728	Open in IMG/M
3300020579\|Ga0210407_10861938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300020579\|Ga0210407_11403775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300020579\|Ga0210407_11424437	Not Available	513	Open in IMG/M
3300020582\|Ga0210395_10327546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1152	Open in IMG/M
3300021168\|Ga0210406_10472857	Not Available	995	Open in IMG/M
3300021170\|Ga0210400_10038580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3706	Open in IMG/M
3300021171\|Ga0210405_10059733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3009	Open in IMG/M
3300021171\|Ga0210405_10167124	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300021178\|Ga0210408_10066366	All Organisms → cellular organisms → Bacteria → Proteobacteria	2818	Open in IMG/M
3300021180\|Ga0210396_10000185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	104034	Open in IMG/M
3300021180\|Ga0210396_10034494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4671	Open in IMG/M
3300021180\|Ga0210396_10391196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1223	Open in IMG/M
3300021181\|Ga0210388_11175444	Not Available	652	Open in IMG/M
3300021401\|Ga0210393_10565092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300021401\|Ga0210393_10973636	Not Available	687	Open in IMG/M
3300021403\|Ga0210397_10059975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2465	Open in IMG/M
3300021406\|Ga0210386_11671776	Not Available	527	Open in IMG/M
3300021407\|Ga0210383_10223100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1614	Open in IMG/M
3300021420\|Ga0210394_10310857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1383	Open in IMG/M
3300021420\|Ga0210394_11118572	Not Available	679	Open in IMG/M
3300021474\|Ga0210390_10811523	Not Available	774	Open in IMG/M
3300021474\|Ga0210390_11384800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300021477\|Ga0210398_10066741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2931	Open in IMG/M
3300021477\|Ga0210398_10203031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1615	Open in IMG/M
3300021479\|Ga0210410_10105166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2494	Open in IMG/M
3300021479\|Ga0210410_10416270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1203	Open in IMG/M
3300021479\|Ga0210410_10631380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	950	Open in IMG/M
3300022518\|Ga0224548_1012486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300022557\|Ga0212123_10177622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1607	Open in IMG/M
3300025509\|Ga0208848_1108670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300027625\|Ga0208044_1061134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300027696\|Ga0208696_1021283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2442	Open in IMG/M
3300027783\|Ga0209448_10000593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11665	Open in IMG/M
3300027853\|Ga0209274_10396580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300027854\|Ga0209517_10285821	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300027884\|Ga0209275_10002079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8287	Open in IMG/M
3300027889\|Ga0209380_10140276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1410	Open in IMG/M
3300027895\|Ga0209624_10048796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2708	Open in IMG/M
3300027908\|Ga0209006_10047028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3882	Open in IMG/M
3300027908\|Ga0209006_10489753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300027911\|Ga0209698_11082516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300028047\|Ga0209526_10179576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1473	Open in IMG/M
3300028906\|Ga0308309_11105967	Not Available	685	Open in IMG/M
3300030524\|Ga0311357_10974817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300030617\|Ga0311356_11798690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300030706\|Ga0310039_10170213	Not Available	872	Open in IMG/M
3300030707\|Ga0310038_10365690	Not Available	635	Open in IMG/M
3300030763\|Ga0265763_1000217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3157	Open in IMG/M
3300030862\|Ga0265753_1072992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300031057\|Ga0170834_103476397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	985	Open in IMG/M
3300031090\|Ga0265760_10035980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1468	Open in IMG/M
3300031128\|Ga0170823_15834194	Not Available	817	Open in IMG/M
3300031231\|Ga0170824_120957004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1407	Open in IMG/M
3300031231\|Ga0170824_128613582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300031234\|Ga0302325_10914859	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300031446\|Ga0170820_13721984	Not Available	962	Open in IMG/M
3300031595\|Ga0265313_10085901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1421	Open in IMG/M
3300031708\|Ga0310686_106940130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1876	Open in IMG/M
3300031708\|Ga0310686_114228194	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300031708\|Ga0310686_114368060	Not Available	1520	Open in IMG/M
3300031718\|Ga0307474_10399212	Not Available	1070	Open in IMG/M
3300032160\|Ga0311301_11508116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300034065\|Ga0334827_059565	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.82%
Aquatic	Environmental → Aquatic	19.30%
Plants	Host-Associated → Plants	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.44%
Freshwater	Environmental → Aquatic → Freshwater	11.40%
Sediment	Environmental → Aquatic → Sediment	4.39%
Peat	Environmental → Terrestrial → Peat	4.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.12%
Loam	Environmental → Terrestrial → Soil → Loam	19.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.39%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.39%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.16%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.39%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.51%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.75%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101024122	3300000567	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSASEENTE*
JGI12635J15846_104092763	3300001593	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPERSTQEENANFAVK*
JGI12635J15846_106243492	3300001593	Forest Soil	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSVLPQQSASDEDSKSLVKRRAVSS*
JGIcombinedJ26739_1011288463	3300002245	Forest Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSALEESAQASLIS*
JGIcombinedJ51221_104732661	3300003505	Forest Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTEEIRTMMR*
Ga0062385_101131322	3300004080	Bog Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLATGSILPLPPVSERHAGFAVK*
Ga0062384_1000456094	3300004082	Bog Forest Soil	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYVFDAWFLLAVGTVLPQSPASERIRNDGR*
Ga0062387_1000620701	3300004091	Bog Forest Soil	VNNWESLVLRAPNIALFVITGCLAMLGVLAALPISLPIPGLAGNSAWYIFTAWFLLAAGSIAPQGSAPEENIGR*
Ga0062388_1007373202	3300004635	Bog Forest Soil	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSVLPQSSSSEEITEGNIPRCPT*
Ga0070761_100209225	3300005591	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSGPEENTEEIRTMMR*
Ga0070761_104741772	3300005591	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPSAQEENAHFAVK*
Ga0070762_100177983	3300005602	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQRSAQEENTHFAVK*
Ga0070762_104329521	3300005602	Soil	LFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPSAQEENAHFAVK*
Ga0075017_1001473612	3300006059	Watersheds	MLRAPNIAVFVMSGCLAMMGILSAMPISLPIPGLAGASAWYIFDAWFLLAVGSLLPQRSAPEENTSKKDDDALGDGHVEDFA*
Ga0075017_1003290811	3300006059	Watersheds	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPSAQVENANFAVK*
Ga0075014_1004101652	3300006174	Watersheds	MLRGPNIAVFVMSGCLAMMGILSASPISLPMPGLAGASAWYIFDAWFLLAVGSLLPQRSAPEENTGKLGR*
Ga0070765_1000209475	3300006176	Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQPALEESAQASLIS*
Ga0070765_1005572171	3300006176	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTGSRLISRTTGLSRYSTLGQD*
Ga0070765_1013083901	3300006176	Soil	ITHCAANDRESLMLRAPNIALFVMSGCLAMMGILSALPISLPIPGLSEASAWYIFDAWFLLAVGSILPQPSAQEENAHFAVK*
Ga0070765_1020311891	3300006176	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQRSA
Ga0075021_107179841	3300006354	Watersheds	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPERSAQEDNAKFAVK*
Ga0073928_103352994	3300006893	Iron-Sulfur Acid Spring	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQRAAQEENTHFAVK*
Ga0073928_107981041	3300006893	Iron-Sulfur Acid Spring	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAQQENTNFAVK*
Ga0073928_110285302	3300006893	Iron-Sulfur Acid Spring	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSILPQRSAQEENTNFAMK*
Ga0116214_11682972	3300009520	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAPEENAHFAVK*
Ga0116222_12442572	3300009521	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAQEENAHFAVK*
Ga0116218_13382891	3300009522	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSAQEENTE*
Ga0116221_10446821	3300009523	Peatlands Soil	IALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSASEENTE
Ga0116221_15042462	3300009523	Peatlands Soil	IALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSAQEENTE
Ga0116220_104070861	3300009525	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAPEEN
Ga0136449_1040205261	3300010379	Peatlands Soil	MLRAPNIAVFVMSGCLAMMGILSASPISLPMPGLAGASAWYIFDAWFLLAVGSLLPQRSAPEENTSKIGR*
Ga0136449_1041217531	3300010379	Peatlands Soil	MLRAPNIALFVMSGCLAIMGILSALPISLPIPGLAGASAWYVFDAWFLLAVGSILPQRSAPEENTERLGR*
Ga0150983_112504342	3300011120	Forest Soil	GITSCAANDWESFMLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSILPQRSAPEENTNFAVK*
Ga0150983_146363292	3300011120	Forest Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSTPEENTEEIRTMMR*
Ga0181523_105308572	3300014165	Bog	MLRAPNIALFVMSGCLAMMGVLSASPIGLPIPGLAGASAWYIFDAWFLLAAGSVLPQAPARSLQQRV*
Ga0182018_100448081	3300014489	Palsa	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSILPQPSAPQENTHFAVK*
Ga0182018_103420211	3300014489	Palsa	MLRAPNIALFVVSGCLAMMGVLSALPISLPMPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTQARLIS*
Ga0182013_10000028153	3300014492	Bog	MLRAPNIALFVVSGCLAMMGVLSALPIELPIPGLAGASAWYIYDAWFLLAVGSVLPQDSEAEENPNRQRGVALTRA*
Ga0182016_100547862	3300014493	Bog	MLRAPNIALFVTSGCLAMMGVLSALPIGLPIPGIASLNGASAWYIFDAWFLLAIGSVLPERSAPEPRYSHAR*
Ga0182024_100985525	3300014501	Permafrost	MLRAPNIALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSVLPQRSAPEENTGSRLISRTTGLSR*
Ga0182024_101066601	3300014501	Permafrost	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTQARLIS*
Ga0182024_127034512	3300014501	Permafrost	MLRAPNIALFVVSGCLAMMGVLSASPIALQIPGLAGGSAWYIFDAWFLLSAGSVLPQGSAAKEIANR*
Ga0181525_105255872	3300014654	Bog	MLRAPNVALFVVSGCLAMMGVLSALPILLPIPGLAGASAWYIFDAWFLLALGSVLPQQSAPTENAQFVVK*
Ga0187801_101915762	3300017933	Freshwater Sediment	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAAGSILPQRSAPEGNTERLNGDALTSALRR
Ga0187847_100957512	3300017948	Peatland	MLRAPNIALFVVSGCLAMIGVLSALPISLPIPGVVGASGWYIFDAWFLLALGSVLPQQSAPE
Ga0187847_108218471	3300017948	Peatland	MLRAPNIALFVTSGCLAMMGVLSALPIGLPIPGIASLNGASAWYIFDAWFLLAIGSVLPERSAPEPRYSHAR
Ga0187783_102570493	3300017970	Tropical Peatland	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFEAWFLLAVGSILPAESPPKESANPDRVRAGA
Ga0187871_100490063	3300018042	Peatland	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAIGSVLPQQPAPEENSDLLAKRRAVSS
Ga0187871_106678962	3300018042	Peatland	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSVLPQQSAPDENSKSLVKRIALSS
Ga0187851_105210992	3300018046	Peatland	MLRAPNIALFVVAGCLAMLGVLSASPIALPIPGLSDASAWYIFDAWFLLAVGSVLPQEPAAAEIEKARAMLR
Ga0193751_10533513	3300019888	Soil	MLRAPNIALFVVSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPERSAQEENANFAVK
Ga0210407_108619381	3300020579	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFPLALGSVLPQRSGPEENTEEIRTMMR
Ga0210407_114037751	3300020579	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPSAQEENAHFAVK
Ga0210407_114244372	3300020579	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQRSAQDENARFAVK
Ga0210395_103275463	3300020582	Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEE
Ga0210406_104728573	3300021168	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSALEESAQA
Ga0210400_100385803	3300021170	Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQPALEESAQASLIS
Ga0210405_100597334	3300021171	Soil	MSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQPAAQEENTHFAVE
Ga0210405_101671241	3300021171	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTEEIRTMMR
Ga0210408_100663663	3300021178	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPSAQEENANFAVK
Ga0210396_1000018534	3300021180	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQPAAQEENTHFAVE
Ga0210396_100344942	3300021180	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSTPEENTEEIRTMMR
Ga0210396_103911963	3300021180	Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSALEESAQASLIS
Ga0210388_111754441	3300021181	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQPALEESAQASLIS
Ga0210393_105650922	3300021401	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTGSRLISRTTGLSRYSTLGQD
Ga0210393_109736361	3300021401	Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSALKESAQASLIS
Ga0210397_100599755	3300021403	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPTPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTGSRLISR
Ga0210386_116717761	3300021406	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSILPQPSAQEENVHFAVK
Ga0210383_102231001	3300021407	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSALKESAQ
Ga0210394_103108572	3300021420	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPERSTQEENANFAVK
Ga0210394_111185721	3300021420	Soil	MLRAPNVALFVVSGCLAMTGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTEEIRTMMR
Ga0210390_108115232	3300021474	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSALKESAQASLIS
Ga0210390_113848001	3300021474	Soil	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSVLPQQSASDEDSKSLVKRRAVS
Ga0210398_100667413	3300021477	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSGPEENTEEIRTMMR
Ga0210398_102030312	3300021477	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQRSAQEENAHLAVK
Ga0210410_101051663	3300021479	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAQEENSNFAVK
Ga0210410_104162701	3300021479	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPSAQEENAHYAVK
Ga0210410_106313803	3300021479	Soil	MLRAPNIALFVMSGCLAMMGSLSALPISLPIPGLADASAWYIFDAWFLLALGSILPQPAAQEENTHFAVE
Ga0224548_10124861	3300022518	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSILPQRSAQEENTNFAVK
Ga0212123_101776221	3300022557	Iron-Sulfur Acid Spring	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAQQENTNFAVK
Ga0208848_11086701	3300025509	Arctic Peat Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSILPQRSAQEENTNF
Ga0208044_10611342	3300027625	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSAQEENTE
Ga0208696_10212832	3300027696	Peatlands Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSASEENTE
Ga0209448_100005937	3300027783	Bog Forest Soil	VNNWESLVLRAPNIALFVITGCLAMLGVLAALPISLPIPGLAGNSAWYIFTAWFLLAAGSIAPQGSAPEENIGR
Ga0209274_103965802	3300027853	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPERSTQEENANFAVK
Ga0209517_102858211	3300027854	Peatlands Soil	MLRAPNIALFVVSGCLAMMGVLAASPIALPIPGLAGASAWYIFDAWFLLAVGSVVPQQLAPEENTEKIRMMIR
Ga0209275_100020793	3300027884	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQRSAQEENTHFAVK
Ga0209380_101402762	3300027889	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEENTGSRLISRTTGLSRYSTLGQD
Ga0209624_100487962	3300027895	Forest Soil	MLRAPNIALFVMSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLAVGSVLPQRSAPDENSKSLVKRRAVSS
Ga0209006_100470282	3300027908	Forest Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEANTEKIRTMMR
Ga0209006_104897532	3300027908	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPRRSAQEENTLRSNLSISAR
Ga0209698_110825162	3300027911	Watersheds	MLRAPNIAVFVMSGCLAMMGILSAMPISLPIPGLAGASAWYIFDAWFLLAVGSLLPQRSAPEENTS
Ga0209526_101795761	3300028047	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLAVGSILPQPAAQEENTHFAVE
Ga0308309_111059671	3300028906	Soil	LFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQPAAQEENTHFAVE
Ga0311357_109748172	3300030524	Palsa	MLRAPNIALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEWKYRRD
Ga0311356_117986902	3300030617	Palsa	MLRAPNIALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSAPEW
Ga0310039_101702132	3300030706	Peatlands Soil	MTCCAANNWESFMLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSASEENTE
Ga0310038_103656902	3300030707	Peatlands Soil	NIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLAVGSTLPQRSAQEENT
Ga0265763_10002172	3300030763	Soil	MSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQGATQEEGNTHFAVE
Ga0265753_10729922	3300030862	Soil	VLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPERSAQEENAHFAVE
Ga0170834_1034763972	3300031057	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPEQSAQEENANFAVK
Ga0265760_100359802	3300031090	Soil	MLRAPNIALFVVSGCLAMMGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQQSAPE
Ga0170823_158341942	3300031128	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLADASAWYIFDAWFLLALGSILPQRSAQEENANFAVK
Ga0170824_1209570043	3300031231	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPERSAQEENANFAVK
Ga0170824_1286135822	3300031231	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLSEASAWYIFDAWFLLAVGSILPQPAAQEENAHFAVK
Ga0302325_109148592	3300031234	Palsa	MLRAPNIALFVMSGCLAMMGVLSALPIGLPIPGIASLNGASAWYIFDAWFLLAVGSVLPQGSAPEHSFGQAR
Ga0170820_137219842	3300031446	Forest Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAQEENANFAVK
Ga0265313_100859013	3300031595	Rhizosphere	MLRAPNIALFVVSGCLAMMGILSALPISLPIPGLAEASAWYIFDAWFLLALGSVLPQRLAQEVNANFAVK
Ga0310686_1069401301	3300031708	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAPEENTNFAAK
Ga0310686_1142281943	3300031708	Soil	MLRAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQPSAQEENANFAVK
Ga0310686_1143680602	3300031708	Soil	MLRAPNVALFVVSGCLAMIGVLSALPISLPIPGLAGASAWYIFDAWFLLALGSVLPQRSASEENTGSRLISRTTGLSR
Ga0307474_103992122	3300031718	Hardwood Forest Soil	MLRPPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRAAREENSNFAVK
Ga0311301_115081162	3300032160	Peatlands Soil	RAPNIALFVMSGCLAMMGILSALPISLPIPGLAGASAWYIFDAWFLLALGSILPQRSAPEENAHFAVK
Ga0334827_059565_1200_1373	3300034065	Soil	MLRAPNIALFVVSGCLAMMGVLSALPIELPIPGLAGASAWYIYDAWFLLAVGSVLPQD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081639

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences