NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081628

Metagenome / Metatranscriptome Family F081628

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081628
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 87 residues
Representative Sequence MIDWWSETEHAVVECLASAGPMSPQDLARRVGISEGEAIAFLCMLVREQKVAIQLVGLTAAPPSRPARGAGRHREKAPAVPEPAYAGGH
Number of Associated Samples 90
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.96 %
% of genes near scaffold ends (potentially truncated) 22.81 %
% of genes from short scaffolds (< 2000 bps) 77.19 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (69.298 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(22.807 % of family members)
Environment Ontology (ENVO) Unclassified
(42.982 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.368 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.62%    β-sheet: 0.00%    Coil/Unstructured: 68.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF02142MGS 13.16
PF00106adh_short 12.28
PF00296Bac_luciferase 11.40
PF14026DUF4242 2.63
PF02771Acyl-CoA_dh_N 1.75
PF13191AAA_16 1.75
PF13374TPR_10 1.75
PF08028Acyl-CoA_dh_2 0.88
PF08546ApbA_C 0.88
PF00144Beta-lactamase 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 11.40
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 2.63
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.88
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.88
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.88
COG2367Beta-lactamase class ADefense mechanisms [V] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms69.30 %
UnclassifiedrootN/A30.70 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459012|GOYVCMS01EBZRPNot Available518Open in IMG/M
2228664022|INPgaii200_c1019053Not Available858Open in IMG/M
3300003994|Ga0055435_10029895All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300003995|Ga0055438_10251131Not Available548Open in IMG/M
3300004268|Ga0066398_10102878All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300004281|Ga0066397_10077222All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300004479|Ga0062595_101203172All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300004479|Ga0062595_101385974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans640Open in IMG/M
3300004633|Ga0066395_10025111All Organisms → cellular organisms → Bacteria2419Open in IMG/M
3300004633|Ga0066395_10056133All Organisms → cellular organisms → Bacteria1763Open in IMG/M
3300005172|Ga0066683_10140981All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300005332|Ga0066388_102165067All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300005332|Ga0066388_102513126All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300005332|Ga0066388_103233370All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005332|Ga0066388_103721250All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005367|Ga0070667_100936845All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300005440|Ga0070705_100534554All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300005445|Ga0070708_100406456All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300005445|Ga0070708_101589056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans609Open in IMG/M
3300005446|Ga0066686_10177442All Organisms → cellular organisms → Bacteria1420Open in IMG/M
3300005468|Ga0070707_101126723All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005526|Ga0073909_10409401All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300005546|Ga0070696_101191470All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300005558|Ga0066698_10464947All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300005764|Ga0066903_107006500All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005983|Ga0081540_1050171All Organisms → cellular organisms → Bacteria2075Open in IMG/M
3300006046|Ga0066652_101135876All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria740Open in IMG/M
3300006175|Ga0070712_100031995All Organisms → cellular organisms → Bacteria3549Open in IMG/M
3300006796|Ga0066665_11155290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia590Open in IMG/M
3300006852|Ga0075433_10429414All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300006854|Ga0075425_100010578All Organisms → cellular organisms → Bacteria9837Open in IMG/M
3300006903|Ga0075426_10178314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales1538Open in IMG/M
3300006904|Ga0075424_100009773All Organisms → cellular organisms → Bacteria9466Open in IMG/M
3300006904|Ga0075424_101187830All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300006914|Ga0075436_101277335All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300009101|Ga0105247_10635529Not Available796Open in IMG/M
3300009162|Ga0075423_11423762All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium742Open in IMG/M
3300009553|Ga0105249_10499711All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300010043|Ga0126380_10507251All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300010043|Ga0126380_11183500Not Available658Open in IMG/M
3300010046|Ga0126384_10200322All Organisms → cellular organisms → Bacteria1580Open in IMG/M
3300010046|Ga0126384_11085013All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300010046|Ga0126384_11622580Not Available609Open in IMG/M
3300010047|Ga0126382_10005401All Organisms → cellular organisms → Bacteria5753Open in IMG/M
3300010048|Ga0126373_11864380Not Available664Open in IMG/M
3300010154|Ga0127503_10616594Not Available508Open in IMG/M
3300010304|Ga0134088_10178413Not Available1015Open in IMG/M
3300010358|Ga0126370_10679114All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300010358|Ga0126370_10744634All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300010358|Ga0126370_12530053Not Available512Open in IMG/M
3300010358|Ga0126370_12594063Not Available507Open in IMG/M
3300010359|Ga0126376_11840029Not Available644Open in IMG/M
3300010360|Ga0126372_11856383Not Available647Open in IMG/M
3300010361|Ga0126378_10083810Not Available3096Open in IMG/M
3300010361|Ga0126378_12226195All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300010362|Ga0126377_10338066All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300010366|Ga0126379_11444193Not Available794Open in IMG/M
3300010376|Ga0126381_101862727All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300010376|Ga0126381_103108140All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300010398|Ga0126383_11636321All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300010398|Ga0126383_13265344Not Available530Open in IMG/M
3300011271|Ga0137393_10529291All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300012202|Ga0137363_10019758All Organisms → cellular organisms → Bacteria4493Open in IMG/M
3300012203|Ga0137399_10728597Not Available835Open in IMG/M
3300012204|Ga0137374_10102990All Organisms → cellular organisms → Bacteria2684Open in IMG/M
3300012206|Ga0137380_10298423All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300012207|Ga0137381_10004710All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9903Open in IMG/M
3300012353|Ga0137367_10423226Not Available943Open in IMG/M
3300012519|Ga0157352_1061583Not Available585Open in IMG/M
3300012532|Ga0137373_10017142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7312Open in IMG/M
3300012532|Ga0137373_10089798All Organisms → cellular organisms → Bacteria2714Open in IMG/M
3300012922|Ga0137394_10788370All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300012929|Ga0137404_10266221All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300012944|Ga0137410_10794739All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300012948|Ga0126375_12095139Not Available502Open in IMG/M
3300012971|Ga0126369_10324737All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300012971|Ga0126369_11691591All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300012971|Ga0126369_11767455Not Available707Open in IMG/M
3300013297|Ga0157378_11908443Not Available643Open in IMG/M
3300013306|Ga0163162_12674890Not Available574Open in IMG/M
3300015371|Ga0132258_10032411All Organisms → cellular organisms → Bacteria11697Open in IMG/M
3300017659|Ga0134083_10270876All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium714Open in IMG/M
3300021560|Ga0126371_10819700All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300025549|Ga0210094_1021601Not Available1038Open in IMG/M
3300025551|Ga0210131_1085032Not Available543Open in IMG/M
3300025910|Ga0207684_10908113All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium740Open in IMG/M
3300025936|Ga0207670_10511040All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300025961|Ga0207712_10758783Not Available850Open in IMG/M
3300025986|Ga0207658_11018290All Organisms → cellular organisms → Bacteria → Proteobacteria756Open in IMG/M
3300026537|Ga0209157_1126209Not Available1178Open in IMG/M
3300027527|Ga0209684_1000479All Organisms → cellular organisms → Bacteria → Proteobacteria7484Open in IMG/M
3300027527|Ga0209684_1001333All Organisms → cellular organisms → Bacteria4375Open in IMG/M
3300027646|Ga0209466_1011390Not Available1879Open in IMG/M
3300027874|Ga0209465_10008987All Organisms → cellular organisms → Bacteria4413Open in IMG/M
3300028047|Ga0209526_10585262Not Available717Open in IMG/M
3300031720|Ga0307469_10061632All Organisms → cellular organisms → Bacteria2428Open in IMG/M
3300031720|Ga0307469_11669149All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300031740|Ga0307468_100115242All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300031740|Ga0307468_100405453Not Available1042Open in IMG/M
3300031782|Ga0318552_10164470Not Available1118Open in IMG/M
3300031820|Ga0307473_10019418All Organisms → cellular organisms → Bacteria2728Open in IMG/M
3300031959|Ga0318530_10210230Not Available799Open in IMG/M
3300032059|Ga0318533_10164908All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300032174|Ga0307470_10004908All Organisms → cellular organisms → Bacteria5191Open in IMG/M
3300032174|Ga0307470_10329176Not Available1050Open in IMG/M
3300032205|Ga0307472_100014546All Organisms → cellular organisms → Bacteria4089Open in IMG/M
3300032205|Ga0307472_101492257All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300032829|Ga0335070_10008588All Organisms → cellular organisms → Bacteria11982Open in IMG/M
3300032897|Ga0335071_10136187All Organisms → cellular organisms → Bacteria2408Open in IMG/M
3300033432|Ga0326729_1044362Not Available689Open in IMG/M
3300033433|Ga0326726_10031843All Organisms → cellular organisms → Bacteria4595Open in IMG/M
3300033502|Ga0326731_1000936All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7754Open in IMG/M
3300034090|Ga0326723_0024864All Organisms → cellular organisms → Bacteria2459Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil22.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil11.40%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.53%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.14%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.14%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.51%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil3.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.75%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.88%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.88%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.88%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.88%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.88%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.88%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025551Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027527Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033502Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fractionEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N56_066213302170459012Grass SoilMIDWWSETEHAVVECLASAGPLEPARSGGPPRPFQGETIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRGKAPARPEPAYAGGH
INPgaii200_101905332228664022SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMQLVGLTAAPSGRPARGAGRHRAKAPARPEPAYAGGH
Ga0055435_1002989523300003994Natural And Restored WetlandsMIDWWSETEQAVIECLASMGPMSPQDLARRVDMSEGEAVSFLCMLAREKKVAIQLVGLTGAPPSRPARGHARRDKASAVPEPAYSGGH*
Ga0055438_1025113113300003995Natural And Restored WetlandsEQAVIECLASMGPMSPQDLARRVDMSEGEAVSFLCMLAREKKVAIQLVGLTGAPPSRPARGHARRDKASAVPEPAYSGGH*
Ga0066398_1010287823300004268Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPSRVGRRAGRHRERAPILPEPAHAGGH*
Ga0066397_1007722223300004281Tropical Forest SoilMIDWWSETEHAVVDALASAGSMSPQDLAQRIGISEGETIVYLCMLARERKVAIQLVGLTPSMKRAGRAVGRPRERTRVRAEPAYTGGH*
Ga0062595_10120317223300004479SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMQLVGLTAAPSGRPARGAGRHRAKAPARPEPAY
Ga0062595_10138597413300004479SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRSKAPARPEPAYAGGH*
Ga0066395_1002511143300004633Tropical Forest SoilMIDWWSKTEHDVVDALASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTSSMNRPGRVAGRPREKTPVRAKPAPVGGY*
Ga0066395_1005613323300004633Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0066683_1014098123300005172SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSDGETIAFLCMLVREQKVAMRLVGLTAAPSGRPARESGRHRAKAPARPEPAYAGGH*
Ga0066388_10216506723300005332Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQELAQRVGISEGEAIAYLCMLAREKKVAIQLVGLTSASPGRGGRRTGRHREKAPVLPEPACAGGH*
Ga0066388_10251312623300005332Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPRRVGRRAGRHREKALVLSEPA*
Ga0066388_10323337013300005332Tropical Forest SoilMIDWWSDTEHAVIDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRRAGRHREKALILPEPAYAGGH*
Ga0066388_10372125023300005332Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLAQRIGLSEGETIAYLCMLARERKVAIQLVGLTPSMDRPCRVAGRPREKTPGRAEPASVGRH*
Ga0070667_10093684523300005367Switchgrass RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAVPSGRPARVGGRHRSKAPARPEPAYAGGH*
Ga0070705_10053455423300005440Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREQKVTMQLVGLTAAPSGRPAREAGRHRAKAPARPEPAYAGGH*
Ga0070708_10040645623300005445Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVTMQLVGLTAAPSGRPAREAGRHRAKAPARPEPAYAGGH*
Ga0070708_10158905613300005445Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPARVSGRHRSKSPARPEPAYAGGH*
Ga0066686_1017744223300005446SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMRLVGLTAAPSGRPARESGRHRAKAPARPEPAYAGGH*
Ga0070707_10112672323300005468Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAAPSGRPTRVGGRHRSKAPARPEPAYAGGH*
Ga0073909_1040940123300005526Surface SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRGKAPARPEPAYAGGH*
Ga0070696_10119147013300005546Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRSKSPARPEPAYAGGH*
Ga0066698_1046494713300005558SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVRELKVAMRLVGLTAAPSGRPARESGRHRAKAPARPEPAYAGGH*
Ga0066903_10700650013300005764Tropical Forest SoilMIDWWSETEHDVVDALASAGPMSPQDLAERIGMSEAEAIAYLSMMARERKVAIQLVGLTPSMNRPGRVAGRPREKTPMRAEPASVGGH*
Ga0081540_105017113300005983Tabebuia Heterophylla RhizosphereMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPSRVGRRAGRHREKAPVLPEPAYAGGH*
Ga0066652_10113587623300006046SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSDGETIAFLCMLVREQKVAMRLVGLTAAPSGRPARESGRHRAKAPARPGPAYAGGH*
Ga0070712_10003199553300006175Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAAPSGRPARVSGRHRSKSPARPEPAYAGGH*
Ga0066665_1115529023300006796SoilMIDWWSDTEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMRLVGLTAAPSGRPARESGRHRAKA
Ga0075433_1042941413300006852Populus RhizosphereMIDWWSETEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLSSPSPSRGSRGAGRHREQARRSFPSPPTRVGTER
Ga0075425_10001057893300006854Populus RhizosphereMIDWWSETEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLSSPSPSRGSRGAGRHREQARRSFPSPPTRVGTERPVG*
Ga0075426_1017831413300006903Populus RhizosphereMIDWWSETEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLSSPSPSRGSRGAGRHRELAPVLPEPAYAGGH*
Ga0075424_10000977323300006904Populus RhizosphereMIDWWSETEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLSSPSPSRGSRGAGRHREQAPVLPEPAYAGGH*
Ga0075424_10118783013300006904Populus RhizosphereMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMQLVGLTAAPSGRPAREAGRHRAKAPARPEPAYAGGH*
Ga0075436_10127733523300006914Populus RhizosphereMIDWWSETEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLSSPSPSRGSRGAGRHRE
Ga0105247_1063552923300009101Switchgrass RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRSKAPARPEPAYAGGH*
Ga0075423_1142376223300009162Populus RhizosphereMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMQLVGLTAAPSGRPAREAGRHRAKSPARPEPAYAGGH*
Ga0105249_1049971123300009553Switchgrass RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTPAPSGRPARVGGRHRSKAPARPEPAYAGGH*
Ga0126380_1050725113300010043Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLAQRIGISEGEVIAYLCMLARERKVAIQLVALTPSMNRPRRVVGRHREKTPVRAEPAYVGGP*
Ga0126380_1118350023300010043Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKERKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0126384_1020032223300010046Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQELAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRRTGRHREKAPVLPEPACAGGH*
Ga0126384_1108501323300010046Tropical Forest SoilQTEHDVVDALASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTSSMNRPGRVAGRPREKTPVRAKPAPVGGY*
Ga0126384_1162258023300010046Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLAERVGISEGEAIAYLCMLAKEQKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0126382_1000540133300010047Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPSRVGRRAGRHRERAPILPEPAYAGGH*
Ga0126373_1186438013300010048Tropical Forest SoilMIDWWSATEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEEKVAIQLVGLTSSSSRRVGRGTGRHREKALVLTEPVYAGGH*
Ga0127503_1061659413300010154SoilVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAASSGRPARVDGRHRSKSPARPEPAYAGGH*
Ga0134088_1017841313300010304Grasslands SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQRVAMQLVGLTAAPSGRPAREAGRHRAKSPARPEPAYAGGH*
Ga0126370_1067911423300010358Tropical Forest SoilDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0126370_1074463423300010358Tropical Forest SoilMIDWWSDTEHAVVDALASTGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRRAGRHREKAPILPEPAYAGGH*
Ga0126370_1253005313300010358Tropical Forest SoilMIDWWSDTEHAVVDALACAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPARGGRRTGRHRDKAPVLPEPACAGGR*
Ga0126370_1259406313300010358Tropical Forest SoilMIDWWSATEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEEKVAIQLVGLTSSSSRRVGRGTGRHREKALCLTEPVYAGGH*
Ga0126376_1184002923300010359Tropical Forest SoilMIDWWSDTEHAVIDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPARGGRRTGRHRDKAPVLPEPACAGGR*
Ga0126372_1185638313300010360Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEEEAIAYLCMLAKEKKVAIQLVGLTSPSPSRGGRGAGRHREKAPVLPEPAYA
Ga0126378_1008381023300010361Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEMKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0126378_1222619513300010361Tropical Forest SoilVDALASAGPMSPQDLAQRIGISEGEVIAYLCMLARERKVAIQLVALTPSMNRPRRVVGRHREKTPVRAEPAYVGGP*
Ga0126377_1033806623300010362Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRVGRRAGRHREKAPVLAEPAYAGGH*
Ga0126379_1144419313300010366Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEEEAIAYLCMLAKEKKVAIQLVGLTSPSPSRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0126381_10186272723300010376Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSLQELAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRRTGRHREKAPVLPEPACAGGH*
Ga0126381_10310814013300010376Tropical Forest SoilMIDWWSETEHDVVDALASAGPMSPQDLAERIGMSEGEAIAYLCMLARERKVAIQLVGLTPSMNRPGRVAGRPREKTPMRAEPASVGGH*
Ga0126383_1163632123300010398Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSASPGRGGRGAGRHREKAPVLPGPAYAGGH*
Ga0126383_1326534413300010398Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLAERVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH*
Ga0137393_1052929113300011271Vadose Zone SoilRGGLAMIDWWSETEHAVVECLATAGPMSPQDLARRVGISEGEAIAFVCMLVREQKVAIQLVGLTAAPPSRPARGAGRQREKTPAVPAPAYAGGH*
Ga0137458_108607313300011436SoilMSPQDLAHRIGISEGEAIAFLCMLAREKKVAIRLVGLTDAPASRSARGVGRHRDKGSVGQAPAFAGGR*
Ga0137363_1001975853300012202Vadose Zone SoilMIDWWSETEHAVVECLATAGPMSPQDLARRVGISEGEAIAFVCMLVREQKVAIQLVGLTAAPPSRPARGAGRQREKTPAVPAPAYAGGH*
Ga0137399_1072859713300012203Vadose Zone SoilMIDWWSETEHAMVECLSSAGPMSPQELAHRVGISEGEAISFLCMLAREKKVATQLVGLTGAPSSKPARGHARHRDKARVVQEPAYAGGH*
Ga0137374_1010299023300012204Vadose Zone SoilMIDWWSETEHAVVECLASAGPMSPQDLARRVGISEGEAIAFLCMLVREQKVAIQLVGLTAAPPSRPARGAGRHREKAPAVPEPAYAGGH*
Ga0137380_1029842323300012206Vadose Zone SoilMIDWWSETEHAVVQCLASAGPMSPQDLARRVGISKGEAIAFLCMLAREQKVAIQLVGLTAAPPSRPARGAGRHREKAPAVPEPAYAGGH*
Ga0137381_1000471033300012207Vadose Zone SoilMIDWWSETEHAVVQCLASAGPMSPQDLARRVGISEGEAIAFLCMLAREQKVAIQLVGLTAAPPSRPARGAGRHREKAPAVPEPAYAGGH*
Ga0137367_1042322613300012353Vadose Zone SoilMIDWWSETEHAVVECLASAGPMSPQDLARRVGISEGEAIAFLCMLVREQKVAIQLVGLTAAPPSRPARGAGRHREKALAVPEPAYAG
Ga0157352_106158323300012519Unplanted SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTATPSGRPARVGGRHRGKAPARPEPAYAGGH*
Ga0137373_1001714213300012532Vadose Zone SoilMIDWWSETEHAVVECLASAGPMSPQDLARRVGISEGEAIAFLCMLVREQKVAIQLVGLTAAPPSRPARGAGRHREKALAVPEPAYAGGH*
Ga0137373_1008979843300012532Vadose Zone SoilMIDWWSETEHAVVQCLASAGPMSPQDLARRVGISEGEAIAFLCMLVREQKVTIQLVGLTAAPPSRPARGAGRHREKAPAVPEPAYAGGH*
Ga0137394_1078837023300012922Vadose Zone SoilMIDWWSETEHAMVECLSSAGPMSPQELAHRVGISEGEAISFLCMLAREKKVAIQLVGLTGAPSSKPARGHARHRDKARVVQEPAYAGGH*
Ga0137404_1026622123300012929Vadose Zone SoilMIDWWSETEHAVVECLASAGPMSPQDLARRVGISEGEAIAFVCMLVREQKVAIQLVGLTAAPPSRPARGAGRQREKTPAVPAPAYAGGH*
Ga0137410_1079473933300012944Vadose Zone SoilRHRLAGGETEHAVVECLASAGPMSPQDLARRVGISEGEAIAFVCMLVREQKVAIQLVGLTAAPPSRPARGAGRQREKTPAVPAPAYAGGH*
Ga0126375_1209513913300012948Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLARRVGISEGEAIAYLCMLAKEKKVVIQLVGLSSPSRSRGGRGAGRHREPAPVLPEPAYAGGH*
Ga0126369_1032473713300012971Tropical Forest SoilMIDWWSKTEHDVVDTLASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTSSMNRPGRVAGRPREKTPVRAKPAPMGGYSA
Ga0126369_1169159123300012971Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLAQRIGFSEGETIAYLCMLARERKVAIQLVGLTPSMDRPGRVAGRPREKTPGRAEPASVGRH*
Ga0126369_1176745513300012971Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEMKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEP
Ga0157378_1190844323300013297Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREQKVAMQLVALTAAPSGRPARVGGRHRSKSPARPEPAYAGGH*
Ga0163162_1267489013300013306Switchgrass RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPTRVGGRHRSKAPARPEPAYAGGH*
Ga0132258_10032411133300015371Arabidopsis RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCILVREKKVAMQLVGLTAAPSGRPARVGGRHRGKAPARPEPAYAGGH*
Ga0134083_1027087613300017659Grasslands SoilMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQRVAMQLVGLTAAPSGRPAREAGRHRAKSPARPEPAYAGGH
Ga0126371_1081970023300021560Tropical Forest SoilMIDWWSDTEHAMVDALASAGPMSPRDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSSPPGRGGRRAGRHREKAPVLPEPAYAGGH
Ga0210094_102160113300025549Natural And Restored WetlandsMIDWWSETEQAVIECLASMGPMSPQDLARRVDMSEGEAVSFLCMLAREKKVAIQLVGLTGAPPSRPARGHARRDKASAVPEPAYSGGH
Ga0210131_108503213300025551Natural And Restored WetlandsGPLSPRDLAHRVGLSEGEAISFLCMLAREGKVAIELVGSTGAPPSRPARGHARRGKAPAVPEPAYSGGH
Ga0207684_1090811333300025910Corn, Switchgrass And Miscanthus RhizosphereMIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVTMQLVGLTAAPSGRPAREAGRHRAKAPARPEPAYAGGH
Ga0207670_1051104013300025936Switchgrass RhizosphereVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAAPSGRPARVSGRHRSKSPARPEPAYAGGH
Ga0207712_1075878323300025961Switchgrass RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTPAPSGRPARVGGRHRSKAPARPEPAYAGGH
Ga0207658_1101829023300025986Switchgrass RhizosphereMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAVPSGRPARVGGRHRSKAPA
Ga0209157_112620923300026537SoilIDWWSETEHAVVECLASAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMRLVGLTAAPSGRPARESGRHRAKAPARPEPAYAGGH
Ga0209684_100047923300027527Tropical Forest SoilMIDWWSDTEHAVVDALASAGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPARGGRRTGRHRDKAPVLPEPACAGGR
Ga0209684_100133323300027527Tropical Forest SoilMIDWWSKTEHDVVDALASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTSSMKRPGRVAGRPREKTPVRAKPAPVGGY
Ga0209466_101139033300027646Tropical Forest SoilMIDWWSETEHAVVDALASAGPMSPQDLAQRIGISEGEVIAYLCMLARERKVAIKLVGLTSSMNRPGRVAGRPREKTRVRTEPAYARGH
Ga0209465_1000898723300027874Tropical Forest SoilMIDWWSDTEHAVVDALASTGPMSPQDLAQRVGISEGEAIAYLCMLAKEKKVAIQLVGLTSPSPGRGGRGAGRHREKAPVLPEPAYAGGH
Ga0209526_1058526223300028047Forest SoilMIDWWSETEHAMVECLSSAGPMSPQELAHRVGISEGEAISFLCMLAREEKVAIQLVGLTGAPPSKPARGHARHRDKARVVQEPAYAGGH
Ga0307469_1006163243300031720Hardwood Forest SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRSKAPARPEPAYAGGH
Ga0307469_1166914913300031720Hardwood Forest SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAVPSGRPARVGGRHRSKAPARPEPAYAGGH
Ga0307468_10011524213300031740Hardwood Forest SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGETIAFLCMLVREKKVAMQLVGLTAVPSGRPARVGGRHRSKAPARPE
Ga0307468_10040545313300031740Hardwood Forest SoilMVDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRSKSPARPEPAYAGGH
Ga0318552_1016447013300031782SoilMIDWWSKTEHDVVDALASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTFSMNRPGRVAGRPREKTPVRAKPAPVGGYS
Ga0307473_1001941823300031820Hardwood Forest SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTAAPSGRPARVGGRHRSKSPARPEPAYAGGH
Ga0318530_1021023023300031959SoilMIDWWSKTEHDVVDALASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTFSMNRPGRVAGRPREKTPVRAKPAPVGGYSA
Ga0318533_1016490833300032059SoilMIDWWSKTEHDVVDALASAGPMSPQDLAQRIGMSEGETIAYLCMLARERKVAIKLVGLTFSMNRPGRVAGRPRE
Ga0307470_1000490823300032174Hardwood Forest SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLTPAPSGRPARVGGRHRSKAPARPEPAYAGGH
Ga0307470_1032917623300032174Hardwood Forest SoilIDWWSETEHAVVECLASAGPLSPRDLARRLGLSEGETIAFLCMLVREQKVAMQLVGLTAAPSGRPAREAGRHRGKGPARPEPAYAGGH
Ga0307472_10001454623300032205Hardwood Forest SoilMIDWWSETEHAVVECLASAGPLSPQDLARRLGLSEGEAIAFLCMLVREKKVAMQLVGLAAAPSGRPARVGGRHRSKAPARPEPAYAGGH
Ga0307472_10149225713300032205Hardwood Forest SoilCLGSAGPMSPQDLARRLGLSEGETIAFLCMLVREQKVAMQLVGLTPAPSGRPPRETGRHRAKAPARPEPAYAGGH
Ga0335070_1000858853300032829SoilMIDWWSETELAVIECLASMGPMSPQDLARRVGMSEGEAISFLCMFAREKKVAIQLVGLTGAPPSKPARGQARRDKARAVPEPAYSGGH
Ga0335071_1013618713300032897SoilSMGPMSPQDLARRVGMSEGEAISFLCMFAREKKVAIQLVGLTGAPPSKPARGQARRDKARAVPEPAYSGGH
Ga0326729_104436213300033432Peat SoilMIDWWSESEQAVIECLASMGPMSPPDLARRVGMSEGEAISFLCMLAREKKVTIQLVGLTGAPPSKPARGQARRDKGRAVPEPAYSGGH
Ga0326726_1003184353300033433Peat SoilMIDWWSESEQAVIECLASMGPMSPPDLARRVGMSEGEAISFLCMLAREKKVTIQLVGLTGAPPSKPARGHARRDKAPAVPEPAHSGGH
Ga0326731_100093653300033502Peat SoilMIDWWSESEQAVIECLASMGPMSPPDLARRVGMSEGEAISFLCMLAREKKVAIQLVGLTGAPPSKPVRGQARRDKGRAVPEPAYSGGH
Ga0326723_0024864_538_8043300034090Peat SoilMIDWWSESEQAVIECLASMGPMSPPDLARRVGMSEGEAISFLCMLAREKKVTIQIVGLTGAPPSRPARGHARRDKAPAVPEPAHSGGH

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.