Metagenome / Metatranscriptome Family F081624

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081624
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	76 residues
Representative Sequence	MVTGAAQRGRGRWRRAKSRRKLEKVAKNQGRNTLAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSATAAS
Number of Associated Samples	94
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.42 %
% of genes near scaffold ends (potentially truncated)	35.09 %
% of genes from short scaffolds (< 2000 bps)	79.82 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (32.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.123 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.86% β-sheet: 0.00% Coil/Unstructured: 37.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01339	CheB_methylest	11.40
PF13426	PAS_9	4.39
PF13489	Methyltransf_23	2.63
PF13649	Methyltransf_25	2.63
PF13188	PAS_8	1.75
PF05991	NYN_YacP	1.75
PF08241	Methyltransf_11	0.88
PF12200	DUF3597	0.88
PF08448	PAS_4	0.88
PF13596	PAS_10	0.88
PF03167	UDG	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	22.81
COG3688	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain	Translation, ribosomal structure and biogenesis [J]	1.75
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.88
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.88
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	85.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	85.09 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	81.58 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.58 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.58 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.58 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.58 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.58 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17470380	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300000955\|JGI1027J12803_100951090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1467	Open in IMG/M
3300000955\|JGI1027J12803_103811244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300002126\|JGI24035J26624_1015148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300004081\|Ga0063454_100144728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1244	Open in IMG/M
3300004114\|Ga0062593_101120390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M
3300004114\|Ga0062593_101609576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300004156\|Ga0062589_100544053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300004156\|Ga0062589_100704685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	897	Open in IMG/M
3300004157\|Ga0062590_100280099	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300004157\|Ga0062590_101752184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300004479\|Ga0062595_100705343	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300004479\|Ga0062595_102034764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300004480\|Ga0062592_102368487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005093\|Ga0062594_101533536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300005164\|Ga0066815_10024028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300005168\|Ga0066809_10101230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300005288\|Ga0065714_10390012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300005293\|Ga0065715_10336242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	919	Open in IMG/M
3300005294\|Ga0065705_10067996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300005329\|Ga0070683_100060142	All Organisms → cellular organisms → Bacteria	3530	Open in IMG/M
3300005329\|Ga0070683_100102542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2695	Open in IMG/M
3300005330\|Ga0070690_100446768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	958	Open in IMG/M
3300005344\|Ga0070661_101477846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300005347\|Ga0070668_100019113	All Organisms → cellular organisms → Bacteria	5151	Open in IMG/M
3300005355\|Ga0070671_100727753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	862	Open in IMG/M
3300005365\|Ga0070688_100597759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	844	Open in IMG/M
3300005367\|Ga0070667_101859999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300005435\|Ga0070714_100244041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1658	Open in IMG/M
3300005436\|Ga0070713_100066832	All Organisms → cellular organisms → Bacteria	3024	Open in IMG/M
3300005437\|Ga0070710_11347006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005458\|Ga0070681_10454108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1194	Open in IMG/M
3300005530\|Ga0070679_100474318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1195	Open in IMG/M
3300005535\|Ga0070684_100933380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	813	Open in IMG/M
3300005544\|Ga0070686_100694650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300006175\|Ga0070712_100171605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1683	Open in IMG/M
3300006175\|Ga0070712_100769048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300006603\|Ga0074064_10226767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300006844\|Ga0075428_100482969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1326	Open in IMG/M
3300006881\|Ga0068865_100194261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1572	Open in IMG/M
3300009098\|Ga0105245_11854044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300009156\|Ga0111538_12987044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300009177\|Ga0105248_11369016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300010042\|Ga0126314_10288359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1170	Open in IMG/M
3300010375\|Ga0105239_12701831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300012212\|Ga0150985_101810273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300012212\|Ga0150985_106078587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1458	Open in IMG/M
3300012469\|Ga0150984_113036934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300012496\|Ga0157353_1040768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012519\|Ga0157352_1074655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300012915\|Ga0157302_10009018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2337	Open in IMG/M
3300012916\|Ga0157310_10154799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300012951\|Ga0164300_10075736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1412	Open in IMG/M
3300012957\|Ga0164303_10034899	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2104	Open in IMG/M
3300012960\|Ga0164301_10282462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1108	Open in IMG/M
3300012961\|Ga0164302_11413631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300012989\|Ga0164305_12106204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300013104\|Ga0157370_11018555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300015371\|Ga0132258_10741324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2474	Open in IMG/M
3300015371\|Ga0132258_10972132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2145	Open in IMG/M
3300015371\|Ga0132258_12833212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1207	Open in IMG/M
3300015372\|Ga0132256_101343864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300015372\|Ga0132256_102159225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300015373\|Ga0132257_100820530	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300015373\|Ga0132257_102532908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300015374\|Ga0132255_100168301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3075	Open in IMG/M
3300015374\|Ga0132255_101380844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1064	Open in IMG/M
3300015374\|Ga0132255_103548821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300015374\|Ga0132255_105083072	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300018067\|Ga0184611_1040916	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300018072\|Ga0184635_10001504	All Organisms → cellular organisms → Bacteria	6814	Open in IMG/M
3300018433\|Ga0066667_10162181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1594	Open in IMG/M
3300018465\|Ga0190269_10351570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	887	Open in IMG/M
3300019362\|Ga0173479_10129325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	980	Open in IMG/M
3300019876\|Ga0193703_1000710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4705	Open in IMG/M
3300019877\|Ga0193722_1001932	All Organisms → cellular organisms → Bacteria	4937	Open in IMG/M
3300019880\|Ga0193712_1031627	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300019881\|Ga0193707_1049677	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300019882\|Ga0193713_1028346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1646	Open in IMG/M
3300019883\|Ga0193725_1007208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3190	Open in IMG/M
3300019886\|Ga0193727_1000909	All Organisms → cellular organisms → Bacteria	12018	Open in IMG/M
3300019996\|Ga0193693_1000293	All Organisms → cellular organisms → Bacteria	9569	Open in IMG/M
3300020002\|Ga0193730_1048649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1225	Open in IMG/M
3300020005\|Ga0193697_1151928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300020016\|Ga0193696_1007487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2998	Open in IMG/M
3300020062\|Ga0193724_1013959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1707	Open in IMG/M
3300021475\|Ga0210392_10643520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	788	Open in IMG/M
3300022901\|Ga0247788_1028333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999	Open in IMG/M
3300023058\|Ga0193714_1002026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3356	Open in IMG/M
3300025271\|Ga0207666_1002714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2143	Open in IMG/M
3300025315\|Ga0207697_10010775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3894	Open in IMG/M
3300025912\|Ga0207707_10147203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2059	Open in IMG/M
3300025915\|Ga0207693_10151005	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300025929\|Ga0207664_10234037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1597	Open in IMG/M
3300025930\|Ga0207701_10117820	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300025930\|Ga0207701_11321497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300025933\|Ga0207706_10242526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1575	Open in IMG/M
3300025935\|Ga0207709_10592570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300025938\|Ga0207704_10613512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300026088\|Ga0207641_11582393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300028768\|Ga0307280_10003150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4176	Open in IMG/M
3300028807\|Ga0307305_10541812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300030844\|Ga0075377_11564225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300030945\|Ga0075373_11539360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300031122\|Ga0170822_11170006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300031231\|Ga0170824_108239427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300031231\|Ga0170824_108923265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300031231\|Ga0170824_110368589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300031231\|Ga0170824_126550603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300031446\|Ga0170820_12362012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300031446\|Ga0170820_13769941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300031474\|Ga0170818_101820826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300032017\|Ga0310899_10390525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300032074\|Ga0308173_11093381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.05%
Host-Associated	Host-Associated	28.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.30%
Plants	Host-Associated → Plants	28.95%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.16%
Sediment	Environmental → Aquatic → Sediment	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.39%
Loam	Environmental → Terrestrial → Soil → Loam	14.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.02%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01929070	2088090014	Soil	MVTGAARRGRGRWRTAKSRRKLERAAKDQGRNRVAANESXGCDPPDRLLLSALKYWEVGRDLIEGGLDTMRSTTAAS
JGI1027J12803_1009510902	3300000955	Soil	MVTGAARRGRGRWRRAKSRRKLEKVAKNQGRKTMAGNESVGCDPPDRLLLSALKYWEVERDLIEERLTAMRSATAAS*
JGI1027J12803_1038112443	3300000955	Soil	MVTGAAPRGRGRWKRAKSRRKLERVAKDQGRNTVAANGSVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAF*
JGI24035J26624_10151482	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPXDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0063454_1001447281	3300004081	Soil	MVTGRRGRGRWRRGKSRRKLEKVAKNQGRNTTTESAGGDPPDKLLLSALKYWEVERDLIEERMASMRSATAAS*
Ga0062593_1011203901	3300004114	Soil	MRIKGRENKGTMVTGAAPRGRGRWKRAKSRRKLERVAKDQGRNTVAANGSVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAF*
Ga0062593_1016095761	3300004114	Soil	TKEGTMVTGAARRGHGRWRRAKSRRKLERAGKNQGRKTMPANESVGCDPPDRLLLPALNYWEVERDLIEDRLATMRSATATS*
Ga0062589_1005440532	3300004156	Soil	MVTGAGQRGRGRWKRAKSRRKLERVAKDQGRNTVAANGSVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAF*
Ga0062589_1007046851	3300004156	Soil	MVTGAARRGRGRWRTAKSRRKLERAAKDQGRNRVAANESLGCDPPDRLLLSALKYWEVERDLIEGGLDTMRS
Ga0062590_1002800991	3300004157	Soil	APRGRGRWKRAKSRRKLERVAKDQGRNTLAANESVGGDPPDKLLLSALKYWEVERDLIEERLDTMRSATAAS*
Ga0062590_1017521841	3300004157	Soil	MVTGARRGRGRWRRAKSTRKVEKGAKNQGRNTIGGNDSVGCDPPDKLLLSALKYWEVERDLIEERLASMRSA
Ga0062595_1007053432	3300004479	Soil	MVTGAGQRGRERWRRAKSRRKLDRVAKSQGRNNEAVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAS*
Ga0062595_1020347641	3300004479	Soil	MVTGAAQRGRGRWRRTKSRRKLERVAKSQGRNNEAVGSDPPDKLLLSALKYWEVERDLIEERIATMRSAAAAS*
Ga0062592_1023684871	3300004480	Soil	QRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0062594_1015335361	3300005093	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS*
Ga0066815_100240283	3300005164	Soil	MVTGAAQRGRGRWRRAKSRRKLERVAKDQARNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERMATMRSATAAS*
Ga0066809_101012302	3300005168	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQERNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLAMRSAAAAS*
Ga0065714_103900122	3300005288	Miscanthus Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0065715_103362421	3300005293	Miscanthus Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRSASPAF*
Ga0065705_100679961	3300005294	Switchgrass Rhizosphere	GRWKRAKSRRKLERVAKDQGRNTLAANESVGGDPPDKLLLSALKYWEVERDLIEERLDTMRSATAAS*
Ga0070683_1000601423	3300005329	Corn Rhizosphere	NRTKEGTMVTGAAQRGRGRWRRTKSRRKLERVAKSQGRNNEAVGSDPPDKLLLSALKYWEVERDLIEERIATMRSAAAAS*
Ga0070683_1001025421	3300005329	Corn Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVSKHQGRNTMTANESAGGDPPDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0070690_1004467682	3300005330	Switchgrass Rhizosphere	MVTGAAQRGRGRWRRTKSRRKLEKVAKSQGGNNQAVGSDPPDKLLLSALKYWEVERDLIEERMATMRSAAAAS*
Ga0070661_1014778461	3300005344	Corn Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0070668_1000191138	3300005347	Switchgrass Rhizosphere	MVTGAAQRGRGRWKKAKSRRKLEKVAKNQERNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLAMRSAAAAS*
Ga0070671_1007277532	3300005355	Switchgrass Rhizosphere	MVTGAAQRGRGRWRRTKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0070688_1005977593	3300005365	Switchgrass Rhizosphere	RTKEGTMVTGAAQRGRGRWRRAKSRRKLEKVVKSQGRNNEAVGSDPPDKLLLSALKYWEVERDLIEERMATMRSAPAAS*
Ga0070667_1018599991	3300005367	Switchgrass Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRS
Ga0070714_1002440412	3300005435	Agricultural Soil	MVTGAAQRGRGRWRKAKSRRKLERVAKNQARNTMATNSVGCDPPDKLLLSALKYWEVERDLIEERLDTMRSAPAAS*
Ga0070713_1000668326	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAAQRGRGRWRKAKSRRKLERVAKNQARNTMATNGSVGCDPPDKLLLSALKYWEVERDLIEERLDTMRSAPAAS*
Ga0070710_113470061	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RWRRAKSRRKVEKVAKDQGRNTMAANGSVGSDPPDKLLLSALKYWEVERDLIEERLDSMRSASAAY*
Ga0070681_104541082	3300005458	Corn Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEE
Ga0070679_1004743183	3300005530	Corn Rhizosphere	MVTGAAQRGRGRWRRTKSRRKLEKVAKSQGGNNQAVGSDPPDKLLLSALKYWEVERDLIEERIATMRSAAAAS*
Ga0070684_1009333802	3300005535	Corn Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRRSAPAY*
Ga0070686_1006946502	3300005544	Switchgrass Rhizosphere	MVTGAAQRARGRWRRTKSRRKLEKVAKSQGGNNQAVGSDPPDKLLLSALKYWEVERDLIEERMATMRSAAAAS*
Ga0070712_1001716054	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAARRGRGRWRRVKSTRKLERTAKNRGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLDTMRSATAAS*
Ga0070712_1007690481	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAGQRGRGRWRRAKSKRKLEKVAKDQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLDSMRSATAAS*
Ga0074064_102267671	3300006603	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLDTMRSATAAF*
Ga0075428_1004829692	3300006844	Populus Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLGRVANNQGRNTAANGSAGCDPPDRLLLSALKYWEVERDLIEERLATMRSATAAS*
Ga0068865_1001942613	3300006881	Miscanthus Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQERNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS*
Ga0105245_118540442	3300009098	Miscanthus Rhizosphere	RRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0111538_129870441	3300009156	Populus Rhizosphere	MVTGAAQRGQRRWRRAKSRHKLERVAKNQGCNTMAANGSVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAS*
Ga0105248_113690162	3300009177	Switchgrass Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPADKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0126314_102883592	3300010042	Serpentine Soil	MVIRIKDEQTKEGIMVTGAARRGRGRWRRGKSRRKLEKVGKNQGRNTTTESAGGDPPDKLLLSALKYWEVERDLIEERMASMRSATAAS*
Ga0105239_127018311	3300010375	Corn Rhizosphere	MVTGAAQRGRGRWRRTKSRRKLERVAKSQGRNNEAVGSDPPDKLLLSALKYWEVERDLIEERMATMRSAPAAS*
Ga0150985_1018102731	3300012212	Avena Fatua Rhizosphere	MVIRIKDKQTREGTMVTGAARRGRGRWRRGKSRRKLEKVAKNQGRNTTTESAGGDPPDKLLLSALKYWEVERDLIEERMASMRSATAA
Ga0150985_1060785872	3300012212	Avena Fatua Rhizosphere	MVIRIKDKQTKEGIMVTGRRGRGRWRRGKSRRKLEKVAKNQGRNTTTEAAGGDPPDKLLLSALKYWEVERDLIEERMASMRSATAAS*
Ga0150984_1130369342	3300012469	Avena Fatua Rhizosphere	MLTGAAGRGRGRWPRGKSKRKLDRVAKNQGHNTIAANGSVRSDSPDKLLLSALKYWEVERDLIEERLATMRSVTAAS*
Ga0157353_10407681	3300012496	Unplanted Soil	NRTKEGTMVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLAAMRSAAAAS*
Ga0157352_10746552	3300012519	Unplanted Soil	MVTGAAQRGRGRWRRAKSRRKLERVATDQGRNTLARNESVGGDPPDKLLLSALKYWEVERDLIEERLDTMRSAT
Ga0157302_100090183	3300012915	Soil	MVTGAARRGRGRWRTAKSRRKLERAAKDQGRNRVAANESLGCNPPDRLLLSALKYWEVERDLIEGGLDTMRSTTAAS*
Ga0157310_101547991	3300012916	Soil	MVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEARLASMRSASPAF*
Ga0164300_100757362	3300012951	Soil	MVTGAGQRGRGRWKRAKSRRKLERVAKDQGRNTVAANESVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAF*
Ga0164303_100348994	3300012957	Soil	MVTGAARRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS*
Ga0164301_102824622	3300012960	Soil	MVTGAAQRGRGRWRKAKSRRKLERVAKNQARNAMARNESVGGDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS*
Ga0164302_114136312	3300012961	Soil	GRGRWRRTKSRRKLEKVAKSQGGNNQAVGSDPPDKLLLSALKYWEVERDLIEERMATMRSAAAAS*
Ga0164305_121062041	3300012989	Soil	MVTGAGQRGQGRWRRAKSKRKLEKVAKDQVRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLDSMRSATAAS*
Ga0157370_110185551	3300013104	Corn Rhizosphere	RTKSRRKLERVAKSQGRNNEAVGSDPPDKLLLSALKYWEVERDLIEERIATMRSAAAAS*
Ga0132258_107413243	3300015371	Arabidopsis Rhizosphere	MVTGAARRGRGRWRKVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS*
Ga0132258_109721324	3300015371	Arabidopsis Rhizosphere	MVMRIKGKQNKEGTMVTGAAQRGRGRWRRTKSKRRLEKIAKNQGGNTMAANGSVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAF*
Ga0132258_128332121	3300015371	Arabidopsis Rhizosphere	CESRANRTKEGTMVTGAAQRGRGRWRRTKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0132256_1013438641	3300015372	Arabidopsis Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLERVAKDQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS*
Ga0132256_1021592252	3300015372	Arabidopsis Rhizosphere	GAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA*
Ga0132257_1008205301	3300015373	Arabidopsis Rhizosphere	TKKGTMVTGAAQRGRGRWKRAKSRRKLERVAKDQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS*
Ga0132257_1025329081	3300015373	Arabidopsis Rhizosphere	MVTGAARRGRGRWRKVKSRRKLERTAKNQGGKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLDTMRSATAAS*
Ga0132255_1001683011	3300015374	Arabidopsis Rhizosphere	RANRTKEGTMVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERVASMRSASPAF*
Ga0132255_1013808442	3300015374	Arabidopsis Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGGNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLAAMRSAAAAS*
Ga0132255_1035488212	3300015374	Arabidopsis Rhizosphere	GRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS*
Ga0132255_1050830721	3300015374	Arabidopsis Rhizosphere	KRTKSRRKLERVAKDQGRNTMARNESVGSDPPDKLLLSALKYWEVERDLIEERLDSMRSASAAY*
Ga0184611_10409164	3300018067	Groundwater Sediment	MEQMVTGAARRGRGRWRRAKSRPKLERAAKDQGRNRMAANESVGCDPPDRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0184635_100015043	3300018072	Groundwater Sediment	MVTGAARRGRGRWRRAKSRPKLERAAKDQGRNRMAANESVGCDPPDRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0066667_101621811	3300018433	Grasslands Soil	KEGIMVTGAARRGRGRWRRGKSRRKLEKVAKNQGRNTTTESAGGDPPDKLLLSALKYWEVERDLIEERMASMRSATAAS
Ga0190269_103515702	3300018465	Soil	GRGRWRRAKSRRKLERAAKNQGRKTMAANESVGCDPPDRLLLSALKYWEVERDLIEERLDATRSAPAAS
Ga0173479_101293251	3300019362	Soil	RRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRSASPAF
Ga0193703_10007103	3300019876	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVAKDQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSASAAF
Ga0193722_10019325	3300019877	Soil	MVTGAARRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLDTMRSATAAS
Ga0193712_10316271	3300019880	Soil	EQKERTMVTGAARRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0193707_10496773	3300019881	Soil	MVTGAARRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0193713_10283461	3300019882	Soil	AVARRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0193725_10072084	3300019883	Soil	MVTGAARRGRGRWRRVKSRRKLERTAKNQGGDTMARNESVGCDPPDKLLLSALKYWEVERDLIEERVATMRSATATS
Ga0193727_10009093	3300019886	Soil	MVTGAGQRGRGRWRRAKSRRKLERVAKNQVRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0193693_10002932	3300019996	Soil	MVTGAAPRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSAAAAS
Ga0193730_10486492	3300020002	Soil	MVTGAAPRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0193697_11519281	3300020005	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0193696_10074872	3300020016	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAAS
Ga0193724_10139593	3300020062	Soil	MVTAAARRGRGRWRRVKSRRKLERTAKNQGEKTLECDEPLQGDQADRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0210392_106435202	3300021475	Soil	MEGTMVTGAGQRGRGRWRKAKPRRKLEKVAKDQARNTMAANGSVGGDPPDKLLLSALKYWEVERDLIEERMATMRSATAAS
Ga0247788_10283332	3300022901	Soil	MVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRSASPAF
Ga0193714_10020263	3300023058	Soil	MVTGAAQRGRGRWKRAKSRRKLERVAKNQGRNAMARNESVGGDPPDKLLLSALKYWEVERDLIEERLATMRSATAAF
Ga0207666_10027143	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRRSATPA
Ga0207697_100107754	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQERNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLAMRSAAAAS
Ga0207707_101472033	3300025912	Corn Rhizosphere	MVTGAAQRGRGRWRRTKSRRKLERVAKSQGRNNEAVGSDPPDKLLLSALKYWEVERDLIEERIATMRSAAAAS
Ga0207693_101510054	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLEKVAKNQGRNTLAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0207664_102340372	3300025929	Agricultural Soil	MVTGAAQRGRGRWRKAKSRRKLERVAKNQARNTMATNSVGCDPPDKLLLSALKYWEVERDLIEERLDTMRSAPAAS
Ga0207701_101178203	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TGAAQRGRGRWRRAKSRRKLDKVSKHQGRNTMTANESAGGDPPDKLLLSALKYWEVERDLIEERLASMRRSATPA
Ga0207701_113214972	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	KEGTMVTGAAQRGRGRWRRAKSRRKLDKVSKNQGRNTMRANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRSASPAF
Ga0207706_102425261	3300025933	Corn Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVSKHQGRNTMTANESAGGDPPDKLLLSALKYWEVERDLIEERLASMRRSATPA
Ga0207709_105925702	3300025935	Miscanthus Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLAMRSAAAAS
Ga0207704_106135121	3300025938	Miscanthus Rhizosphere	MVTGAAQRGRGRWKRAKSRRKLEKVAKNQERNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAAAA
Ga0207641_115823931	3300026088	Switchgrass Rhizosphere	MVTGAAQRGRGRWRRAKSRRKLDKVLKNQGRNTVRANQSVGGEPTDKLLLSALKYWEVERDLIEERLASMRR
Ga0307280_100031505	3300028768	Soil	MVTGAARRGRGRWRRAKSTRKLEKAAKNQGRKTMEAKGSGGCDAPDRLLLSALKYWEVERDLIEERLTAMRSATAAS
Ga0307305_105418121	3300028807	Soil	MVTGAAQRGRGRWKRAKSRRKLEKVSKNQGRNTMTANESVGGDPPDKLLLSALKYWEVERDLIEERLASMRSATPAF
Ga0075377_115642251	3300030844	Soil	MVTGATQRGRGRWKRAKSRRKLEKVAKNQGRNTMAANGSVGCDPPDKLLLSALKYWEVERDLIEERLATMRSAT
Ga0075373_115393601	3300030945	Soil	MVTGATQRGRGRWKRAKSRRKLERVAKDQERNTLARNESVGGDPPDKLLLSALKYWEVERDLIEERLDTVRSATAAF
Ga0170822_111700062	3300031122	Forest Soil	MVTGAAQRGRGRWRRTKSRRKLEKVAKNQGGNTMAANGSVAADPPDKLLLSALKYWEVERDLIEERLATMRSATPAF
Ga0170824_1082394272	3300031231	Forest Soil	MVTGATQRGRGRWKRAKSRRKLERVAKDQERNTLARNESVGGDPPDKLLLSALKYWEVERDLIEERLD
Ga0170824_1089232652	3300031231	Forest Soil	GRWKRAKSRRKLERVAKDQGRNTMARNESVGGEPPDKLLLSALKYWEVERDLIEERLATMRSASAAF
Ga0170824_1103685891	3300031231	Forest Soil	MVTGTARRGRGRWRRAKSRCKLERAAKNQGRKTMAANESVGCDPPDRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0170824_1265506032	3300031231	Forest Soil	MRIKADRTKKGTMVTGAGRRGRGRWRRAKSRRKVEKVAKDQGRNTMAANGSVGGDPPDKLLLSALKYWEVERDLIEERLDSMRSATAAY
Ga0170820_123620122	3300031446	Forest Soil	MVTGAARRGRGRWRRVKSRRKLERTAKNQGEKTLERDEPLQGDQADRLLLSALKYWEVERDLIEERLDTMRSA
Ga0170820_137699411	3300031446	Forest Soil	RAKSRRKLEKVAKNQGRNTMEANGSFGCDPPDKLLLSALKYWEVERDLIEERLDTMRSATAAS
Ga0170818_1018208261	3300031474	Forest Soil	TKSRRKLERAAKDQGRNTMAANESIGCDPPDRLLLSALNYWEVKQDLIEERLSAIRSATVAS
Ga0310899_103905251	3300032017	Soil	MVTGAAQRGRGRWKRAKSRRKLGRVANNQGRNTAANGSAGCDPPDRLLLSALKYWEVERDLIEERLATMRSATAAS
Ga0308173_110933812	3300032074	Soil	MVTGAGQRGRGRWRRTKSRRKLEKVAKSQGRNNQAVGSDPPDKLLLSALKYWEVERDLIEERM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081624

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences