Metagenome / Metatranscriptome Family F081623

Basic Information
Family ID	F081623
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	55 residues
Representative Sequence	SIVDVLGEFVATVAPVPGGPEGPEPTAATQADRILASAVSDTDDDACLVAVRIR
Number of Associated Samples	105
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	92.98 %
% of genes from short scaffolds (< 2000 bps)	94.74 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (71.930 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.930 % of family members)
Environment Ontology (ENVO)	Unclassified (21.053 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.368 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.93% β-sheet: 0.00% Coil/Unstructured: 67.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00294	PfkB	20.18
PF00171	Aldedh	18.42
PF00534	Glycos_transf_1	15.79
PF07332	Phage_holin_3_6	8.77
PF12277	DUF3618	6.14
PF01814	Hemerythrin	3.51
PF13579	Glyco_trans_4_4	2.63
PF01740	STAS	2.63
PF13524	Glyco_trans_1_2	2.63
PF00196	GerE	0.88
PF14417	MEDS	0.88
PF07228	SpoIIE	0.88
PF00005	ABC_tran	0.88
PF00909	Ammonium_transp	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	18.42
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	18.42
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	18.42
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.81 %
Unclassified	root	N/A	27.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.81 %
Unclassified	root	N/A	27.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.93 %
Unclassified	root	N/A	27.19 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.28 %
Unclassified	root	N/A	27.19 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.28 %
Unclassified	root	N/A	27.19 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53.51 %
Unclassified	root	N/A	27.19 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.19 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	20.18 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.75 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.19 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	20.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.75 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.19 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	20.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.75 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.19 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	20.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.75 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003352\|JGI26345J50200_1015257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300004091\|Ga0062387_101224965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300004091\|Ga0062387_101417700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300004153\|Ga0063455_100933771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300005337\|Ga0070682_101325436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300005343\|Ga0070687_100490837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300005347\|Ga0070668_101968214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300005355\|Ga0070671_100756790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300005436\|Ga0070713_101664018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300005553\|Ga0066695_10839819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300005574\|Ga0066694_10598492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300005610\|Ga0070763_10416380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M
3300005712\|Ga0070764_11036478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300005764\|Ga0066903_108187565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300005921\|Ga0070766_11309917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300005983\|Ga0081540_1140174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	972	Open in IMG/M
3300006175\|Ga0070712_100260150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1390	Open in IMG/M
3300006573\|Ga0074055_11658505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300006755\|Ga0079222_12453672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300006806\|Ga0079220_10536208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300009137\|Ga0066709_100066415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4203	Open in IMG/M
3300009525\|Ga0116220_10187830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	893	Open in IMG/M
3300009624\|Ga0116105_1133847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	646	Open in IMG/M
3300009698\|Ga0116216_10301023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	977	Open in IMG/M
3300009792\|Ga0126374_11587806	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300010152\|Ga0126318_10348205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	895	Open in IMG/M
3300010337\|Ga0134062_10685714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300010371\|Ga0134125_12451767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300010379\|Ga0136449_102942693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300010397\|Ga0134124_11774425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300010877\|Ga0126356_10163986	Not Available	1038	Open in IMG/M
3300011003\|Ga0138514_100120862	Not Available	576	Open in IMG/M
3300012207\|Ga0137381_11305086	Not Available	619	Open in IMG/M
3300012502\|Ga0157347_1039990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300012923\|Ga0137359_11639790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	531	Open in IMG/M
3300014325\|Ga0163163_11206626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	819	Open in IMG/M
3300014838\|Ga0182030_10744063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	909	Open in IMG/M
3300016357\|Ga0182032_10321242	Not Available	1229	Open in IMG/M
3300016371\|Ga0182034_11592623	Not Available	573	Open in IMG/M
3300016404\|Ga0182037_10855481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300017961\|Ga0187778_10205425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1256	Open in IMG/M
3300019240\|Ga0181510_1092657	Not Available	528	Open in IMG/M
3300020580\|Ga0210403_10797451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	751	Open in IMG/M
3300020581\|Ga0210399_10497362	All Organisms → cellular organisms → Archaea	1014	Open in IMG/M
3300021374\|Ga0213881_10502796	Not Available	549	Open in IMG/M
3300021405\|Ga0210387_10231897	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300021477\|Ga0210398_11237182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	589	Open in IMG/M
3300021478\|Ga0210402_11096147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	723	Open in IMG/M
3300021479\|Ga0210410_10708776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300022467\|Ga0224712_10312117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	737	Open in IMG/M
3300022529\|Ga0242668_1060387	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300025320\|Ga0209171_10149321	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300025905\|Ga0207685_10305563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	789	Open in IMG/M
3300025928\|Ga0207700_11841157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300025929\|Ga0207664_10205655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1701	Open in IMG/M
3300025929\|Ga0207664_11173126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	685	Open in IMG/M
3300025938\|Ga0207704_11210071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300025949\|Ga0207667_10646690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1063	Open in IMG/M
3300027168\|Ga0208239_1015779	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300027882\|Ga0209590_10379041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	913	Open in IMG/M
3300027905\|Ga0209415_10491660	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300028768\|Ga0307280_10190364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300028775\|Ga0302231_10338695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300028906\|Ga0308309_10619569	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300029943\|Ga0311340_10518286	Not Available	1061	Open in IMG/M
3300029943\|Ga0311340_10590819	Not Available	972	Open in IMG/M
3300029951\|Ga0311371_12444196	Not Available	534	Open in IMG/M
3300029999\|Ga0311339_11597386	Not Available	576	Open in IMG/M
3300029999\|Ga0311339_11652389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	563	Open in IMG/M
3300030013\|Ga0302178_10442232	Not Available	574	Open in IMG/M
3300030043\|Ga0302306_10426912	Not Available	506	Open in IMG/M
3300030058\|Ga0302179_10485258	Not Available	543	Open in IMG/M
3300030509\|Ga0302183_10361483	Not Available	558	Open in IMG/M
3300030524\|Ga0311357_10721149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300030580\|Ga0311355_11795762	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300030618\|Ga0311354_10458842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1270	Open in IMG/M
3300030631\|Ga0210279_10207391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	701	Open in IMG/M
3300031543\|Ga0318516_10685166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	582	Open in IMG/M
3300031572\|Ga0318515_10419791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300031708\|Ga0310686_101100118	Not Available	579	Open in IMG/M
3300031708\|Ga0310686_118800497	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300031713\|Ga0318496_10832695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	508	Open in IMG/M
3300031718\|Ga0307474_10750827	Not Available	771	Open in IMG/M
3300031719\|Ga0306917_10392493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1083	Open in IMG/M
3300031723\|Ga0318493_10208916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300031740\|Ga0307468_101608761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300031751\|Ga0318494_10093875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1646	Open in IMG/M
3300031764\|Ga0318535_10514804	Not Available	531	Open in IMG/M
3300031782\|Ga0318552_10698305	Not Available	517	Open in IMG/M
3300031831\|Ga0318564_10471797	Not Available	546	Open in IMG/M
3300031832\|Ga0318499_10129713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	981	Open in IMG/M
3300031879\|Ga0306919_10304149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300031879\|Ga0306919_11113662	Not Available	602	Open in IMG/M
3300031880\|Ga0318544_10046677	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031890\|Ga0306925_10921006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	897	Open in IMG/M
3300031896\|Ga0318551_10313709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300031908\|Ga0310900_11652712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300032008\|Ga0318562_10916283	Not Available	500	Open in IMG/M
3300032067\|Ga0318524_10457558	Not Available	668	Open in IMG/M
3300032089\|Ga0318525_10667785	Not Available	529	Open in IMG/M
3300032090\|Ga0318518_10324526	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300032261\|Ga0306920_101710100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300032892\|Ga0335081_10969353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300032954\|Ga0335083_10646384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300033134\|Ga0335073_10437205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1517	Open in IMG/M
3300033134\|Ga0335073_11278888	Not Available	728	Open in IMG/M
3300033134\|Ga0335073_11984248	Not Available	533	Open in IMG/M
3300033290\|Ga0318519_10793789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	582	Open in IMG/M
3300034124\|Ga0370483_0206696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.98%
Host-Associated	Host-Associated	7.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.84%
Plants	Host-Associated → Plants	7.02%
Aquatic	Environmental → Aquatic	6.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.81%
Peat	Environmental → Terrestrial → Peat	12.28%
Freshwater	Environmental → Aquatic → Freshwater	5.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.63%
Roots	Host-Associated → Plants → Roots	1.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.88%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.88%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.63%
Loam	Environmental → Terrestrial → Soil → Loam	13.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.02%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.88%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.02%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.51%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.88%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030631	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO086SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26345J50200_10152571	3300003352	Bog Forest Soil	RRGDSIEDVLGEFVAGLAPGAGGRPEAGDLTAAAQADQILAGADSDTGDDACLVAVRIR*
Ga0062387_1012249651	3300004091	Bog Forest Soil	EFVATVTAGDSGSTPDGGELTAAARADQVLASAVSDTGDDACLVVVRIR*
Ga0062387_1014177002	3300004091	Bog Forest Soil	IERRGDSIEDVLGEFVAGLAPGAGGRPEAGDLTAAAQADQILAGADSDTGDDACLVAVRIR*
Ga0063455_1009337712	3300004153	Soil	FVTTVAPSPPGPGGAQPTAAAQADRILAAAVSDTDDDACLVAVRIR*
Ga0070682_1013254361	3300005337	Corn Rhizosphere	IVDVLREFVATVAPVPAGQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR*
Ga0070687_1004908372	3300005343	Switchgrass Rhizosphere	ESIVDVLREFVATVAPVPAGQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR*
Ga0070668_1019682141	3300005347	Switchgrass Rhizosphere	REFVATVAPVPAGQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR*
Ga0070671_1007567902	3300005355	Switchgrass Rhizosphere	VATVAPVPAGQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR*
Ga0070713_1016640182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TDGLIEQRGESIVDVLADFVATVAPAPGTGDGADGGTEPGAGPTAAEQADRILASAVSDTDDDACLVAVRIR*
Ga0066695_108398191	3300005553	Soil	ESIVDVLGEFVTSVAPVPGELEGPESTAAAQADRILATAVSDTDDDARLVAVRIR*
Ga0066694_105984922	3300005574	Soil	VDVLREFVATVAPVPAGQEGPEPTAAAQADRILAAAVSDTDDDACLVAVRIR*
Ga0070763_104163802	3300005610	Soil	DVLAEFVAGLGPGAAGGPAAPNLTGPNLTAAAQADQILASAVSDTGDDACLVAVRIR*
Ga0070764_110364782	3300005712	Soil	SIVDVLKEFVATLGLPHGQELTAAAQADQILANAVSDTEDDACLVAVRIR*
Ga0066903_1081875652	3300005764	Tropical Forest Soil	DGLIEQRGESIVDVLADFVATVAPAPGTGDGTGGTEPGAGPTAAEQADRILASAASDTDDDACLVAVRIR*
Ga0070766_113099172	3300005921	Soil	ESIVDVLGEFVATVAPVPGGPEGPEPTAATQADRILASAVSDTDDDACLVAVRIR*
Ga0081540_11401741	3300005983	Tabebuia Heterophylla Rhizosphere	IEQRDESIVDVLREFVATVAPVPEGQEGAQPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0070712_1002601501	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SIVDVLGEFVATVAPVPGGPEGPEPTAATQADRILASAVSDTDDDACLVAVRIR*
Ga0074055_116585052	3300006573	Soil	IVDVLREFVATVAPVPAGQEGSQPTAGAQADRILATSVSDTDDDACLVAVRIR*
Ga0079222_124536722	3300006755	Agricultural Soil	QRGESIVDVLADFVATVAPAPGPGDGAAGGAEPGAGPTAAEQADRILASAVSDTDDDACLVAVRIR*
Ga0079220_105362081	3300006806	Agricultural Soil	IERRGESIVDVLGEFVTTVAPGPEDRDGPEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0066709_1000664155	3300009137	Grasslands Soil	VDVLGEFVATVAPVPGGPEGPEPTAATQADRILASAVSDTDDDACLVAVRIR*
Ga0116220_101878302	3300009525	Peatlands Soil	EFVATLGPGEMTAAAQADQILANAVSDTEDDACLVAVRIR*
Ga0116105_11338472	3300009624	Peatland	SIIDVLEEFVAVVTAQIPAAGVGPVGPADPAEDRPELTAAAQADRILASAVSDTGDDACLVAVRIR*
Ga0116216_103010232	3300009698	Peatlands Soil	LIERRGDSIVDVLKEFVATLGPEEMTAAAQADQVLANAVSDTEDDACLVVVRIR*
Ga0126374_115878062	3300009792	Tropical Forest Soil	RGESIVDVLGEFVATVAPVPGGRDGPEATAAAQADRILATTVSDTDDDACLVAVRIR*
Ga0126318_103482051	3300010152	Soil	DGLIEQRGESIVDVLADFVATVAPGQGTGESAAGGDEPGAEPTAAEQADRILASAVSDTDDDACLVAVRIR*
Ga0134062_106857141	3300010337	Grasslands Soil	SERRGESIVDVLGEFVTSVAPVPGELEGPESTAAAQADRILASAVSDTDDDACLVAVRIR
Ga0134125_124517672	3300010371	Terrestrial Soil	ESIVDVLGEFVTSVAPVPGELEGPESTAAAQADRILASAVSDTDDDACLVAVRIR*
Ga0136449_1029426932	3300010379	Peatlands Soil	LFTDGLIERRGDSIEDVLAEFVAGLVPGAAGRPEAPDLTGPDLTGPDLTGPDLTGPDLTAAAQADQILASAVSDTGDDACLVAVRIR*
Ga0134124_117744252	3300010397	Terrestrial Soil	LIEQRGESIVDVLREFVATVAPVPAGQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR*
Ga0126356_101639862	3300010877	Boreal Forest Soil	LIERRGDSIEDVLEEFVAGLGPGAAGGPAAGDLTAAAQADQILASAVSDTGDDACLVAVRIR*
Ga0138514_1001208622	3300011003	Soil	IVDVLTDFVATLGSPGGPGPAAAGPEPTAAAQADRILARAVSDTEDDACLVAVRIR*
Ga0137381_113050863	3300012207	Vadose Zone Soil	IERRGESIIDVLGEFVATVAPVPGGQEGPGSTAAAQADRILASAVSDTDDDACLVAVRIR
Ga0157347_10399902	3300012502	Arabidopsis Rhizosphere	GESIVDVLREFVATVAPVPAGQEGSQPTAAAQADRILATAFSDTDDDACLVAVRIR*
Ga0137359_116397902	3300012923	Vadose Zone Soil	SIEDVLGEFVAGLGPGAAGRPAAGDLTAAAQADQILASAVSDTGDDACLVAVRIR*
Ga0163163_112066262	3300014325	Switchgrass Rhizosphere	IEQRGESIVDVLADFVATVAPASGTGDGAAGGAEPGAGPTAAEQADRILASAVSDTDDDACLVAVRIR*
Ga0182030_107440632	3300014838	Bog	DVLEEFVVAVTPRRAGEPGGAGLSAAAQADRILASAVSDTGDDACLVAVRIR*
Ga0182032_103212421	3300016357	Soil	VLGEFVTTVAPVPAGQQAPEPTAAAQADRILATSVSDTDDDACLVAVRIR
Ga0182034_115926232	3300016371	Soil	DVLGEFVTAVAPVPDGRQGPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0182037_108554812	3300016404	Soil	FVATVAVGGPGVGSDDCELTAAARADEILASAVSDTGDDACLVAVHLH
Ga0187778_102054251	3300017961	Tropical Peatland	DVLGEFVATLIPAAPTAGGLELTAAAQADQVLASTVSDTGDDACLVVVRIC
Ga0181510_10926572	3300019240	Peatland	DGLIERRGDSIEDVLEEFVANVAAGPDESRASDLTAAAQADRVLASRASDTGDDACLVVVRIR
Ga0210403_107974511	3300020580	Soil	EDVLGEFVAGLRPEAAAAGPGAGEPTAAAQADQVLASAVSDTGDDACLVVVRIR
Ga0210399_104973622	3300020581	Soil	LGPGAAGGPAAPNLTGPNLTAAAQADQILASAVSDTGDDACLLAVRIG
Ga0213881_105027962	3300021374	Exposed Rock	ESIVDVLGEFVATVASDPEGQGGPEPTAAAQADRIMAAAVSDTDDDACLVAVRIR
Ga0210393_112262331	3300021401	Soil	DVLEEFVAALPTGSGEPTAAIQADQIMASATSDTGDDACLVVVRIG
Ga0210387_102318971	3300021405	Soil	RGDSIEDVLAEFVAGLGPGAAGQPEAGDLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0210398_112371821	3300021477	Soil	GESIVDVLKEFVATLGMPHGQELTAAAQADQILANAVSDTEDDACLVAVRIR
Ga0210402_110961471	3300021478	Soil	ERRDESIVDVLGDFVMTVAPVPAGPQGPEPTAAAQADRILAAAVSDTNDDACLVAVRIR
Ga0210410_107087761	3300021479	Soil	FVTSVAPIPEGHEGPEPTAAAQADRILASAVSDTDDDACLVAVRIR
Ga0224712_103121171	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	TDGLIEQRGESIVDVLADFVATVAPAPGTGDGAAGEAGPGAGPTAAEQADRILASAVSDTDDDACLVAVRIR
Ga0242668_10603871	3300022529	Soil	AEFVAGLGPGAAGGPAAPNLTGPNLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0228598_10417221	3300024227	Rhizosphere	RRGESIEDVLGDFVAALPSGSAELPAAAQADQVLAAAVSDTGDDACLVVVRIR
Ga0209171_101493211	3300025320	Iron-Sulfur Acid Spring	LGPGAAGQPRTPNLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0207685_103055632	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	FVATVAPVPGGPEGPEPTAATQADRILASAVSDTDDDACLVAVRIR
Ga0207700_118411571	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	IVDVLREFVATVAPVPAGQEGPQPTAAAQADRILAAAVSDTDDDACLVAVRIR
Ga0207664_102056552	3300025929	Agricultural Soil	ADFVATVAPAQGTGESAAGGAEPGAEPTAAEQADRILATAVSDTDDDACLVAVRIR
Ga0207664_111731261	3300025929	Agricultural Soil	DGLIEQRGESIVDVLADFVATVAPAPGTGDGADGGTEPGAGPTAAEQADRILASAVSDTDDDACLVAVRIR
Ga0207704_112100712	3300025938	Miscanthus Rhizosphere	RGESIVDVLREFVATVAPVPAWQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0207667_106466902	3300025949	Corn Rhizosphere	QRGESIVDVLREFVATVAPVPAGQEGSQPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0208239_10157792	3300027168	Forest Soil	GLIERRGDSIEDVLAEFVAGLGPGAAGRPEAGDLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0209590_103790411	3300027882	Vadose Zone Soil	EFVANVAPTPAGPGEPEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0209415_104916601	3300027905	Peatlands Soil	IERRGDSIEDVLEEFVANVAAGPDESPASDLTAAAQADRVLASRASDTGDDACLVVVRIR
Ga0307280_101903642	3300028768	Soil	ESIIDVLREFVATVAPVPAGQEGSQPTAAAQADRILASAVSDTDDDACLVAVRIR
Ga0302231_103386951	3300028775	Palsa	VATVTPGAPGGPRRPGAQGDPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0308309_106195691	3300028906	Soil	RRGDSIEDVLAEFVAGLSPGAAGQPEAGDLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0311340_105182862	3300029943	Palsa	MRDKSIEDVLNDFVAVAAEPGDGVGELTAAVQADRIMASAVSDTGDDACLVAVRIR
Ga0311340_105908192	3300029943	Palsa	RDKSIEDVLDDFVAVAAEPGDGAGELTAAVQADRIMASAVSDTGDDACLVAVRIR
Ga0311371_124441962	3300029951	Palsa	GGPRRPGAQGDPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0311339_102589673	3300029999	Palsa	ERRGESIVDVLEEFVAAVTPKAPKAPKTPGAPSAPGGPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0311339_115973861	3300029999	Palsa	ESIVDVLEEFVAAVTPRTPRGSGGPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0311339_116523891	3300029999	Palsa	EDFVAAVTPGGPDGPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0302178_104422321	3300030013	Palsa	IIDVLEDFVVAVTPGGPAGAALSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0302306_104269121	3300030043	Palsa	EEFVAAVTPGAPRRPGAPGGPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0302179_104852581	3300030058	Palsa	RGESIGDVLEEFVAAVTPRAPEAPEAPGEPGGTGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0302183_103614831	3300030509	Palsa	VAAVTPGAPRRPGAPGGPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0311357_107211493	3300030524	Palsa	EEVLSDFVATVADVGQAAGPDGAEQTAAVQADRILASAVSDTDDDACLVAVRVR
Ga0311355_117957622	3300030580	Palsa	ERRGDSIEDVLREFVAGLGPGDGERPEAPNRTGADLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0311354_104588421	3300030618	Palsa	RRGESIIDVLEEFVATVTPGAPGGPRRPGAQGDPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0210279_102073911	3300030631	Soil	EEFVAAVTPGGPEGPGRAGLSAAAQADRILASAVSDTGDDACLVAVRIR
Ga0310038_101536752	3300030707	Peatlands Soil	FVATLGPEEMTAAAQADQVLANAVSDTEDDACLVVVRIR
Ga0318516_106851662	3300031543	Soil	LGEFVATVAIGDQGTRPDDGELTAAAQADEVLASAVSDTGDDACLVVVRIR
Ga0318515_104197912	3300031572	Soil	LIERRSESIEDVLGEFVATVAVGDPGIGSDDGELTAAVRADEILASAVSDTGDDACLVVVRIR
Ga0310686_1011001182	3300031708	Soil	LEEFVATVAPPPPGSGGRGAELTAAAQADRILARAVSDTGDDACLVAVRIR
Ga0310686_1188004972	3300031708	Soil	DSIEDVLAEFVAGLGPGAAGQPQAGDLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0318496_108326951	3300031713	Soil	EFVAGLGPVGLGAAAAGPGAGEPTAAAQADQVLASAVSDTGDDACLVVVRIR
Ga0307474_107508272	3300031718	Hardwood Forest Soil	LIERRGDSIEDVLAEFVAGLGPGAAGRPEAGDLTAAAQADQILASAVSDTGDDACLVAVRIR
Ga0306917_103924931	3300031719	Soil	ESIVDVLGEFVTTVAPAPEDRDGPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0318493_102089163	3300031723	Soil	IQRRGESIVDVLGEFVTAVAPVPDGQQRPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0307468_1016087611	3300031740	Hardwood Forest Soil	EQRGESIVDVLREFVATVAPVPDGQEGAEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0318494_100938752	3300031751	Soil	VLGEFVTTVAPVPDDQDKPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0318535_105148041	3300031764	Soil	LIERRGESIVDVLGEFVTTVAPVPGEQDGPEPTAAAQADRILATAVSDTEDDACLVAVRI
Ga0318552_106983051	3300031782	Soil	ESIVDVLGEFVTAVAPVPDGQQRPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0318564_104717972	3300031831	Soil	IVDVLGEFVATLGPVSGPGGQELTAAAQADQILASAASDTDDDACLVAVRIR
Ga0318499_101297131	3300031832	Soil	SIVDVLGEFVTTVAPVPDDQDKPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0306919_103041491	3300031879	Soil	LGEFVTTVAPVPEGRDGPEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0306919_111136622	3300031879	Soil	LIERRGESIVDVLGEFVTTVAPAPEDRDGPEPTAAAQADRILATAVSDTEDDACLVAVRI
Ga0318544_100466771	3300031880	Soil	VTTVAPVPEGRDGPEGRDGPEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0306925_109210061	3300031890	Soil	LGEFVATVAVGGPGVGSDDGELTAAARADEILASAVSDTGDDACLVVVRIR
Ga0318551_103137091	3300031896	Soil	DVLGEFVTTVAPVPGEQDGPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0310900_116527122	3300031908	Soil	ATVAPVPAWQEGSQPTAAAQADRIHATAVSDTDDDACLVAVRIR
Ga0318562_109162832	3300032008	Soil	SIIDVLGEFVMTVAPIPDGQDGPEPTAAAQADRILATAVSDTDDDACLVAVRIADRRGARRDV
Ga0318524_104575581	3300032067	Soil	FVATIGPVSGPGGEELTAAAQADQVLANAVSDTEDDACLVAVRIR
Ga0318525_106677851	3300032089	Soil	VTTVAPVPEDHDGPEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0318518_103245261	3300032090	Soil	FVTTVAPVPEGRDGPEPTAAAQADRILATAVSDTDDDACLVAVRIR
Ga0311301_103464881	3300032160	Peatlands Soil	LEEFVAMLGPEEMTAAAQADQVLANAVSDTEDDACLVVVRIR
Ga0306920_1017101001	3300032261	Soil	AVLAEFVTAVAPVPDGQQRPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0335081_109693532	3300032892	Soil	ERRSESIVDVLGEFVATVAPAREGAGLTAAAQADRILATAVSDTEDDACLVAVRVR
Ga0335083_106463841	3300032954	Soil	FVTSVAPVPGELEGSESTAAVQADRILASTVSDTDDDACLVAVRIR
Ga0335073_104372051	3300033134	Soil	VLGEFVTTVAPGPGGQDGPEPTAAAQADRILATAVSDTEDDACLVAVRIR
Ga0335073_112788883	3300033134	Soil	VLGEFVATVAADPQSPGGPAPTAAAQADRIMAAAVSDTDDDACLVAVRIRELAGSPT
Ga0335073_119842481	3300033134	Soil	VDVLGEFVTTVAPGPEDRDEPEPTAAAQADRILAAAVSDTDDDACLVAVRIR
Ga0318519_107937891	3300033290	Soil	DGLIEQRGKSITDVLGEFVATLGPATAPGGQELTAAAQADRVLANAVSDTEDDACLVAVRIR
Ga0370483_0206696_1_141	3300034124	Untreated Peat Soil	VTPRAPGGPDGPGEAGLSAAAQADRILASAVSDTGDDACLVAVRIR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081623

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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