NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081610

Metagenome / Metatranscriptome Family F081610

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081610
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 107 residues
Representative Sequence MDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG
Number of Associated Samples 90
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.53 %
% of genes near scaffold ends (potentially truncated) 35.09 %
% of genes from short scaffolds (< 2000 bps) 84.21 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.965 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(26.316 % of family members)
Environment Ontology (ENVO) Unclassified
(47.368 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.895 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.25%    β-sheet: 0.00%    Coil/Unstructured: 42.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF05193Peptidase_M16_C 24.56
PF00034Cytochrom_C 22.81
PF03401TctC 3.51
PF00589Phage_integrase 2.63
PF00472RF-1 1.75
PF08264Anticodon_1 0.88
PF01252Peptidase_A8 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 3.51
COG0216Protein chain release factor RF1Translation, ribosomal structure and biogenesis [J] 1.75
COG0597Lipoprotein signal peptidaseCell wall/membrane/envelope biogenesis [M] 1.75
COG1186Protein chain release factor PrfBTranslation, ribosomal structure and biogenesis [J] 1.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.96 %
UnclassifiedrootN/A14.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10171705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria878Open in IMG/M
3300004152|Ga0062386_100300798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1279Open in IMG/M
3300004479|Ga0062595_100181524All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300004633|Ga0066395_10126719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1267Open in IMG/M
3300005332|Ga0066388_100034026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4872Open in IMG/M
3300005332|Ga0066388_102040895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1029Open in IMG/M
3300005363|Ga0008090_15181283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria686Open in IMG/M
3300005436|Ga0070713_100864782All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300005437|Ga0070710_10152418All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300005764|Ga0066903_100038667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5580Open in IMG/M
3300005764|Ga0066903_104947093All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005764|Ga0066903_106247231All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300005764|Ga0066903_108918298Not Available508Open in IMG/M
3300006052|Ga0075029_100840544Not Available627Open in IMG/M
3300006057|Ga0075026_100337961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria832Open in IMG/M
3300006102|Ga0075015_100177110All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300006162|Ga0075030_100554313All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300006175|Ga0070712_100706349All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300006354|Ga0075021_10675822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria662Open in IMG/M
3300006804|Ga0079221_10404565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium847Open in IMG/M
3300006806|Ga0079220_10661040Not Available758Open in IMG/M
3300006854|Ga0075425_100419152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1542Open in IMG/M
3300007076|Ga0075435_100903470All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300009792|Ga0126374_10105985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1607Open in IMG/M
3300010046|Ga0126384_11514709Not Available629Open in IMG/M
3300010048|Ga0126373_10154721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2183Open in IMG/M
3300010361|Ga0126378_11849319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales687Open in IMG/M
3300012971|Ga0126369_10119066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2429Open in IMG/M
3300012971|Ga0126369_11347290Not Available804Open in IMG/M
3300015371|Ga0132258_10094400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B127027Open in IMG/M
3300016294|Ga0182041_10111963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2030Open in IMG/M
3300016294|Ga0182041_10360419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1225Open in IMG/M
3300016319|Ga0182033_10407397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1151Open in IMG/M
3300016341|Ga0182035_10132496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B121884Open in IMG/M
3300016341|Ga0182035_10457365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1083Open in IMG/M
3300016371|Ga0182034_10387089All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1144Open in IMG/M
3300016371|Ga0182034_11282506Not Available639Open in IMG/M
3300016387|Ga0182040_10115405All Organisms → cellular organisms → Bacteria1852Open in IMG/M
3300016404|Ga0182037_10573402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales955Open in IMG/M
3300016404|Ga0182037_10950681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales747Open in IMG/M
3300016422|Ga0182039_10462543All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300016422|Ga0182039_10491287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1059Open in IMG/M
3300016445|Ga0182038_10490186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1047Open in IMG/M
3300016445|Ga0182038_10872461All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300017939|Ga0187775_10115420All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales919Open in IMG/M
3300017959|Ga0187779_10150148All Organisms → cellular organisms → Bacteria1436Open in IMG/M
3300017994|Ga0187822_10103407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria872Open in IMG/M
3300018058|Ga0187766_10013889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B124595Open in IMG/M
3300020580|Ga0210403_10486740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1003Open in IMG/M
3300020581|Ga0210399_10317131All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300021171|Ga0210405_10512424All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300021405|Ga0210387_10739806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium871Open in IMG/M
3300021560|Ga0126371_10150161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2391Open in IMG/M
3300021560|Ga0126371_10313020All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1699Open in IMG/M
3300021560|Ga0126371_11736197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales747Open in IMG/M
3300025915|Ga0207693_10033597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B124047Open in IMG/M
3300025928|Ga0207700_10271209All Organisms → cellular organisms → Bacteria1456Open in IMG/M
3300025929|Ga0207664_10113845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B122253Open in IMG/M
3300027039|Ga0207855_1010450All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300027050|Ga0209325_1003507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1567Open in IMG/M
3300027070|Ga0208365_1034844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria667Open in IMG/M
3300027576|Ga0209003_1063715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860670Open in IMG/M
3300027703|Ga0207862_1085455All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales949Open in IMG/M
3300027812|Ga0209656_10468404Not Available555Open in IMG/M
3300027874|Ga0209465_10117863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1308Open in IMG/M
3300027911|Ga0209698_10415974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1049Open in IMG/M
3300031057|Ga0170834_102719970All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1385Open in IMG/M
3300031231|Ga0170824_128500744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria720Open in IMG/M
3300031446|Ga0170820_16156346All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300031679|Ga0318561_10309960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales864Open in IMG/M
3300031718|Ga0307474_10072669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2555Open in IMG/M
3300031719|Ga0306917_10552836All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae905Open in IMG/M
3300031744|Ga0306918_10012978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4802Open in IMG/M
3300031744|Ga0306918_10400044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1070Open in IMG/M
3300031753|Ga0307477_10249882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1229Open in IMG/M
3300031754|Ga0307475_10719671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria795Open in IMG/M
3300031768|Ga0318509_10835528Not Available509Open in IMG/M
3300031771|Ga0318546_10618789Not Available762Open in IMG/M
3300031781|Ga0318547_10669446All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300031796|Ga0318576_10389518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria659Open in IMG/M
3300031819|Ga0318568_10127804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1542Open in IMG/M
3300031833|Ga0310917_10123261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1689Open in IMG/M
3300031833|Ga0310917_10265849All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300031835|Ga0318517_10178391Not Available955Open in IMG/M
3300031879|Ga0306919_10135081All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1782Open in IMG/M
3300031879|Ga0306919_10390574All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300031879|Ga0306919_10402707All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1050Open in IMG/M
3300031880|Ga0318544_10402920Not Available532Open in IMG/M
3300031912|Ga0306921_10184018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2449Open in IMG/M
3300031912|Ga0306921_11695663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
3300031912|Ga0306921_12393365Not Available551Open in IMG/M
3300031941|Ga0310912_10292139All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300031941|Ga0310912_10456887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria996Open in IMG/M
3300031945|Ga0310913_10275315All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1185Open in IMG/M
3300031946|Ga0310910_10274523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1322Open in IMG/M
3300031946|Ga0310910_10733294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria780Open in IMG/M
3300031954|Ga0306926_10834735All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1108Open in IMG/M
3300031962|Ga0307479_10058543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3713Open in IMG/M
3300031981|Ga0318531_10297099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria730Open in IMG/M
3300032001|Ga0306922_10008659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B129874Open in IMG/M
3300032001|Ga0306922_10188644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2211Open in IMG/M
3300032025|Ga0318507_10207242All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300032043|Ga0318556_10722689Not Available518Open in IMG/M
3300032055|Ga0318575_10536375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria594Open in IMG/M
3300032065|Ga0318513_10269650Not Available826Open in IMG/M
3300032066|Ga0318514_10123441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1329Open in IMG/M
3300032076|Ga0306924_10014699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B128159Open in IMG/M
3300032091|Ga0318577_10487680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus yangtzensis588Open in IMG/M
3300032094|Ga0318540_10603633All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300032261|Ga0306920_101793064Not Available866Open in IMG/M
3300032261|Ga0306920_103192502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria614Open in IMG/M
3300032261|Ga0306920_103825187Not Available550Open in IMG/M
3300032892|Ga0335081_10016875All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B1211828Open in IMG/M
3300033289|Ga0310914_11393790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria604Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil26.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.39%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.51%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.51%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.63%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.63%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.75%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.88%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.88%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.88%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027039Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)EnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1017170513300003505Forest SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG*
Ga0062386_10030079823300004152Bog Forest SoilMDQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPIGLFLLLGGIAGRGQHVVRARSALFVGGGTLFIVVAFLIFQHIANSMGGLGLG*
Ga0062595_10018152413300004479SoilMDRAGITASPITASPRLRASFFAVAASMLFLWGWSLIPLIENWNNPQEDGFSAVPAFYGTLICLPTGLLLLTGGIAPRGQRVVRARYALFVGGGTLFIVAAFLIFQQVANSMGGLGLG*
Ga0066395_1012671923300004633Tropical Forest SoilALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG*
Ga0066388_10003402643300005332Tropical Forest SoilMDRTGITASSRLRVIFFAVSASMLFLWGWSLIPLIENWNNPREDGFSAVPAFYGTLVCLPTGLFLLIGGIAPRGQHVVRARSALFVGGGTLFIVVAFLIFQQIADSRGG*
Ga0066388_10204089523300005332Tropical Forest SoilMDQAGITASPQLRIIFLVVAALMLLLWGWSLIPPIENWNNPNEDGFSYVPAFYASLICLPAGLFLLIGAIAGHGQQVVRARSALFVGAGTLFIVVAFLIFQRIADSMDWG*
Ga0008090_1518128313300005363Tropical Rainforest SoilMLMLWGWSLIPRIENWNNPYEDGFSYVGVFYASIICLPAGMLLLIGAIAGHGRHVARARSALFVGGATLFIVVAFLIFQHIANSMGGLGLG*
Ga0070713_10086478213300005436Corn, Switchgrass And Miscanthus RhizosphereMDQAGIIASPRLRVIFLAVAAAMLFLWGWSLVPPIENWNNPYDDGFSCVGVFYATLICLPVGLLLLIGGISGRGQHVARARPALFVGGGTLFIVVAFLIFQQIA
Ga0070710_1015241823300005437Corn, Switchgrass And Miscanthus RhizosphereMDRAGITASPITASPRLRASFFAVAASMLFLWGWSLIPLIENWNNPQEDGFSAVPAFYGTLICLPTGLLLLTGGIAPRGQRVVRARYALFVGGGTL
Ga0066903_10003866733300005764Tropical Forest SoilMDQAGITASPQRRIIFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVPAFYASIICLPAGLFLLIGAIAGHGRHVVRARSALFVAAGTLFIVVAFLIFQRIANSMGGLGLG*
Ga0066903_10494709323300005764Tropical Forest SoilMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG*
Ga0066903_10624723113300005764Tropical Forest SoilDPLRRKRGSRMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG
Ga0066903_10891829813300005764Tropical Forest SoilMDRTGITASSRLRVIFFAVSASMLFLWGWSLIPLIENWNNPREDGFSAVPAFYGTLVCLPTGLLLLSGGISPRGQRVARARAALYVGAGTLVIVVAFLIFQQIANSMGG*
Ga0075029_10084054413300006052WatershedsMDQVGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG*
Ga0075026_10033796123300006057WatershedsFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFPLLGGIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG*
Ga0075015_10017711023300006102WatershedsMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGGIAGRGQHVVRARSALFVGGGTLFIVVAFLIFQHIANSMGGLGLG*
Ga0075030_10055431313300006162WatershedsMDQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGGIAGRGQHVVRARSALFVGGGTLFIVVAFLIFQHIANSMGGLGLG*
Ga0070712_10070634913300006175Corn, Switchgrass And Miscanthus RhizosphereMDRAGITASPRLRVIFLTVSASMLFLWGWSLIPLIENWNNPREDGFSAVPAFYGTLICLPTGLFLLIGGIAPRGQHVVRARSALYVGGGTLFIVVAFLIFQQIANSMDG
Ga0075021_1067582213300006354WatershedsMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG*
Ga0079221_1040456523300006804Agricultural SoilMGQAGIIASPRLRVIFLAVAAAMLFLWGWSLVPPIENWNNPYDDGFSYVGLFYATLICLPVGLLLLIGGISGRGQHVARARPALFVGGGTLFIVVAFLIFQQIAN*
Ga0079220_1066104013300006806Agricultural SoilMNHSEMASPKLRRVFAVVAASMFVLWGWSLIPPIENWNNPNEDGFSFVPTFYATLICLPVGIFLLAGAIAGRDRHLARARPALFIGAATLFVVVAFLIFQYIANSMGGL*
Ga0075425_10041915223300006854Populus RhizosphereMDQAGIIASPRLRVIFLAVAAAMLFLWGWSLVPPIENWNNPYDDGFSCVGVFYATLICLPVGLLLLIGGISGRGQHVARARPALFVGGGTLFIVVAFLIFQQIAN*
Ga0075435_10090347023300007076Populus RhizosphereMGQAGIIASPRLRVIFLAVAAAMLFLWGWRLVPPIENWNNPYDDGFSCVGVFYATLICLPVGLLLLIGGISGRGQHVARARPALFVGGGTLFIVVAFLIFQQIAN*
Ga0126374_1010598523300009792Tropical Forest SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLCVGDAMGWG*
Ga0126384_1151470923300010046Tropical Forest SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG*
Ga0126373_1015472123300010048Tropical Forest SoilMDQAGITALPRLRVSFLAVAALMFLLWGWSLVPPIENWNNPYDDGFSYVGVFYASIICLPTGLLLLVGGVTGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG*
Ga0126378_1184931923300010361Tropical Forest SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPNEDGFSYVPAFYASLICLPAGLFLLIGAIAGHGQQVVRARSALFVGAGTLFIVVAFLIFQRIADSMDWG*
Ga0126369_1011906633300012971Tropical Forest SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWLLSALSQFLHFF*
Ga0126369_1134729023300012971Tropical Forest SoilMDQAGITASPQRRIIFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVPAFYASLICLPAGLFLLIGAIAGHGQQVVRARSALFVGAGTLFIVVAFLIFQHIGDSMGWG*
Ga0132258_1009440053300015371Arabidopsis RhizosphereMDRRGITASSRLRVIFFAVSASMLFLWGWSLIPLIENWNNPREDGFSAVPAFYGTLVCLPTGLFLLIGGIAPRGQHVVRARSALFVGGGTLFIVAAFLIFQQIADSMGG*
Ga0182041_1011196323300016294SoilMDQAEITASPRLRVAFLVVAALMLPLWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQPIG
Ga0182041_1036041923300016294SoilMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0182033_1040739723300016319SoilMLLHWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0182035_1013249613300016341SoilMDQAEITASPRLRVAFLVVAALMLLIWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLFIVVGFLIFQHIANSMGGLGLG
Ga0182035_1045736523300016341SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLVPAIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0182034_1038708913300016371SoilRVLPRPSRTSFYRPRSATAEEKGSRVDQVEITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIARHGRHVARARPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0182034_1128250613300016371SoilMLRATFVVMAASMLALWGWSLVPPIENWNNPNEDGFSYVPAFYATIVRLPTGLFLLAGAIAGRGRHLERAHLALLVGAVTLFIVVTFLIFQYIADSMPGLGLS
Ga0182040_1011540523300016387SoilMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0182037_1057340223300016404SoilMDQAEITVSPRPRLAFLVVAALMLLLWGWSLVPAIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0182037_1095068123300016404SoilMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENLNNLYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0182039_1046254313300016422SoilMDQAEITASPRLRVAFLVVAALMLPLWGLSLVPPIENWNNPYEEGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQQAGALRKARKTDGLWRQWAVSGQRR
Ga0182039_1049128723300016422SoilLAFLVVAALMLLLWGWSLVPAIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0182038_1049018623300016445SoilAGFCVEQAELNLYRPRSATAEEKGSRMDQAEITASPRLRVAFLVVAALMLLIWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQHIANSMGGLGLG
Ga0182038_1087246123300016445SoilFLVVAALMLLLWGWSLVPAIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0187775_1011542023300017939Tropical PeatlandMFLLWGWSLIPPIENWNNPYEDGFSYVGVFYASIVCLPTGLLLLIGAIAVHGAHVVRARSAFSVDVGILVIVVAFLIFQSIANSMGGLGLG
Ga0187779_1015014823300017959Tropical PeatlandMDQEGTTASPQLRVIFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIGCLPTGLFLLIGAIAGHGQHVARARPALFVGIGTLAIVVAFLIFQRIANSMGGLGLS
Ga0187822_1010340723300017994Freshwater SedimentMDEAGITASPKLRVIFFVVAALMLLLWSWSLIPPIESWDNPYEDGFSYVPIFYASIVCLPAGLFLVIGAIAGHGRHVVRPRSALFVGGGTLFIVVAFLIFQRVANSMGGLGLG
Ga0187766_1001388913300018058Tropical PeatlandMDQEGTTASPQLRVIFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIGCLPAGLFLLIGAIAGHGQHVARARPALLVGIGTLAIVAAFLI
Ga0210403_1048674013300020580SoilRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG
Ga0210399_1031713123300020581SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVV
Ga0210405_1051242423300021171SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPHEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQ
Ga0210387_1073980623300021405SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG
Ga0126371_1015016123300021560Tropical Forest SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG
Ga0126371_1031302033300021560Tropical Forest SoilMDQAGITALPRLRVSFLAVAALMFLLWGWSLVPPIENWNNPYDDGFSYVGVFYASIICLPTGLLLLVGGVTGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0126371_1173619723300021560Tropical Forest SoilMDRTGITASPRLRVIFLAVAASMLFLWGWSLIPLIENWNNPREDGFSAVPAFYGTLVCLPTGLFLLIGGVAPRGQNVVRARSALFVGGGTLFIVVAFLIFQQIADSMGG
Ga0207693_1003359743300025915Corn, Switchgrass And Miscanthus RhizosphereMDQAGIAASPSLRVIFLAIAASMLFLWGWSLIPPIENWNNPYDDGFSYVGVFYATMICRPTSLFLLIGAIAGSGRHVARARSALFVGGGTLFIVVAFLIFQQIAN
Ga0207700_1027120923300025928Corn, Switchgrass And Miscanthus RhizosphereMDRAGITASPITASPRLRASFFAVAASMLFLWGWSLIPLMENWNPQEDGFSAVPAFYGTLICLPTGLLLLTGGIAPRGQRVVRARYALFVGGGTLFIVAAFLIFQQVANSMGGLGLG
Ga0207664_1011384533300025929Agricultural SoilMDRAGITASPITASPRLRASFFAVAASMLFLWGWSLIPLMENWNNPQEDGFSAVPAFYGTLICLPTGLLLLTGGIAPRGQRVVRAVMRCSWAAGRFSLWRRF
Ga0207855_101045023300027039Tropical Forest SoilMAEEKGSRMDQAGTTASPQLRVIFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIVCLPTGLFLLIGAIAGHGQHVARARPALLVGIGTLAIVVAFLIFQRIANSMGGLGL
Ga0209325_100350723300027050Forest SoilMGQAGIIASPRLRVIFLAVAAAMLFLWGWSLVPPIENWNNPYDDGFSYVGLFYATLICLPVGLLLLIGGISGRGQHVARARPALFVGGGTLFIVVAFLIFQQIAN
Ga0208365_103484423300027070Forest SoilIFLALAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG
Ga0209003_106371523300027576Forest SoilMGQAGIIASPRLRVIFLAVAAAMLFLRGWSLVPPIENWNNPYDDGFSYVGLFYATLICLPVGLLLLIGGISGRGQHVARARPALFVGGG
Ga0207862_108545523300027703Tropical Forest SoilMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIVCLPTGLFLLIGAIAGHGQHVARARPALFVGIGTLAIVVAFLIFQRVANSMGGLGLS
Ga0209656_1046840423300027812Bog Forest SoilMDQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPIGLFLLLGGIAGRGQHVVRARSALFVGGGTLFIVVAFLIFQHIANSMGGLGLG
Ga0209465_1011786313300027874Tropical Forest SoilLLLWGWSLIPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGCHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG
Ga0209698_1041597423300027911WatershedsMDQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGGIAGRGQHVVRARSALFVGGGTLFIVVAFLIFQHIANSMGGLGLG
Ga0170834_10271997013300031057Forest SoilMDQAGITASPRLRVIFLAVAAAMLFLGGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARPALFVGGGTLFIVVAFLIFQQIANSMGGLGLG
Ga0170824_12850074413300031231Forest SoilMNQAGIAASPRLRIIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGGIAGRGQDVVRARSALFVGGVTLFIVVAFLIFQQIANSMGGLGLG
Ga0170820_1615634613300031446Forest SoilMDQGGITASPRLRVIFLAVAAAMLFLWGWSLIPPIENWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGGIAGRGQYVARARSALFVGGVTLFIVVAFLIFQQIANSMGGLGLG
Ga0318561_1030996023300031679SoilMDPAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNLYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0307474_1007266933300031718Hardwood Forest SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARSALFVGGGTLIIVVAFLIFQQIANSMGGLGLG
Ga0306917_1055283613300031719SoilMLRATFVVMAASMLALWGWSLVPPIENWNNPNEDGFSYVPAFYATIVCLPTGLFLLAGAIAGRGRHLERAHSALLVSAATLFIVVAFLIFQYIADSMPVLGLS
Ga0306918_1001297843300031744SoilMDQAEITASPRLRVAFLVVAALMLLIWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQPIG
Ga0306918_1040004413300031744SoilRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0307477_1024988223300031753Hardwood Forest SoilPSATAEEKGSRMNQAEITASPRLRLIFLAVAAAMLFLWSWSLIPPIKNWNNPYEDGFSYVGVFYASIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVAFLIFRQIANSMGGLGLG
Ga0307475_1071967113300031754Hardwood Forest SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIAGRGQHVVRARAALFVGGGTLFIVVTFLIFQQIANSMGGLGLG
Ga0318509_1083552813300031768SoilGFYRPRSATAEEKGSRMDQAEITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPAPFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0318546_1061878913300031771SoilMDQAGITALPRLRVSFLAVAALMFLLWGWSLVPPIDNWNNPYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0318547_1066944613300031781SoilKQGSRMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0318576_1038951813300031796SoilRSATAEEKGSRMDQAEITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGW
Ga0318568_1012780413300031819SoilRSATAEEKGSRVDQVEITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLFIVVAFLIFQRVGDAMGW
Ga0310917_1012326113300031833SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLVPAIENWNKPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0310917_1026584923300031833SoilMDQAEITASPRLRVAFLVVAALMLPLWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQHIANSMGGLGLG
Ga0318517_1017839113300031835SoilMDPAGITASPRLRVSFLVVAALMFLLWGWSLVPPIDNWNNPYDDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0306919_1013508123300031879SoilRLRVAFLVVAALMLLIWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQPIG
Ga0306919_1039057413300031879SoilVDQVEITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLFIVVAFLIFQRVGDAMRWDGVERACYPNFCIFF
Ga0306919_1040270723300031879SoilLAFLVVAALMLLLWGWSLVPVIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0318544_1040292023300031880SoilTASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0306921_1018401823300031912SoilMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNLYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0306921_1169566313300031912SoilMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0306921_1239336513300031912SoilMDQAEITASPRLRLAFLVVAALMLLLWGWSLIPPIENWNNPYDDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLFLVVAFLIFQRIGDAMGWG
Ga0310912_1029213923300031941SoilMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNLYEDGFSYVGVFYASIICLPTGLFLMLVGGVTGRGRHVARARPARFVGAGTLFIAN
Ga0310912_1045688723300031941SoilMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0310913_1027531533300031945SoilMLLLWGWSLVPAIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0310910_1027452323300031946SoilMFLLWGWSLVPPIENWNNLYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0310910_1073329413300031946SoilLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0306926_1083473523300031954SoilMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0307479_1005854333300031962Hardwood Forest SoilMNQAGITASPRLRVIFLAVAAAMLFLWGWSLIPPIKNWNNPYEDGFSYVGVFYATIVCLPTGLFLLLGAIGGRGQHVVRARAALFVGGGTLFIVVAFLIFQQIANSMGGLGLG
Ga0318531_1029709923300031981SoilLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0306922_1000865973300032001SoilMDQAEITASPRLRVAFLVVAALMLLIWGLSLVPPIENWNNPYEDGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQHIANSMGGLGLG
Ga0306922_1018864413300032001SoilRMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNLYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0318507_1020724223300032025SoilDQAELGFYRPRSATAEEKGSRMDQAEITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0318556_1072268913300032043SoilMDQAEITVSPRPRLAFLVVAALMLLLWGWSLVPAIENWNKPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0318575_1053637523300032055SoilMLLLWGWSLVPPIENWNNPYEDGFSYVGGFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0318513_1026965013300032065SoilWSLVPAIENWNKPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPVLFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0318514_1012344113300032066SoilSRTDSHRPRLLRRKKQGSRMDQAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNLYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0306924_1001469983300032076SoilMDPAGITASPRLRVSFLVVAALMFLLWGWSLVPPIENWNNPYEDGFSYVGVFYASIICLPTGLLLLVGGVAGRGRHVARARPALFVGAGTLFIVVAFLIFQHIANSMGGLGLG
Ga0318577_1048768023300032091SoilRSATAEEKGSRMDQAGITASPRLRLAFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGW
Ga0318540_1060363313300032094SoilALMLPLWGLSLVPPIENWNNPYEEGFSYVGVFYASLICLPTGLFLLMGGIAGHGQHVARARPALFVGGGTLLIVVAFLIFQHIANSMGGLGLG
Ga0306920_10179306413300032261SoilLHYSQCPGLIFRAAKWKLRHYLMLRATFVVMAASMLALWGWSLVPPIENWNNPNEDGFSYVPAFYATIVCLPTGLFLLAGAIAGRGRHLERAHSALLVSAATLFIVVAFLIFQYIADSMPVLGLS
Ga0306920_10319250213300032261SoilIFLVVAALMLLLWGWSLVPPIENWNNPYEDGFSYVPAFYASIICLPAGLFLLIGAIAGHGRHVVRARSALFVAAGTLFIVVAFLIFQRIANSMGGLGLG
Ga0306920_10382518723300032261SoilRTSFYRPRSATAEEKGSRMDQAEITVSPRPRLAFLVVAALMLLLWGWSLVPAIENWNKPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARARPALFVGVGTLFIVVAFLIFQRVGDAMGWG
Ga0335081_1001687573300032892SoilMLLLWSRSLIPPIESWDNPYEDGFSCVPAFYASIVCLPAGLFLVIGAIAGHGRHVVRARSALFVGGGTLFIVVAFLIFQRVANSMGGLGLG
Ga0310914_1139379013300033289SoilMDQAEITVSPRPRLAFLVVAALMLLLWGWSLVPAIENWNNPYEDGFSYVGVFYASLICLPAGLFLLIGAIAGHGRHVARAGPALFVGVGTLFIVVAFLIFQRVGDAMGWG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.