Metagenome / Metatranscriptome Family F081557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081557
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	90 residues
Representative Sequence	HQSQLTQRDFATRHGLGLSTLSKWLRVENEAASPPVKFQEVTLPNMPLRYAVEVVSPQGWTVRLQNSSKIETLPQLLQALPC
Number of Associated Samples	85
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	81.58 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.596 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (9.649 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.474 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.91% β-sheet: 15.45% Coil/Unstructured: 53.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF05717	TnpB_IS66	63.16
PF13817	DDE_Tnp_IS66_C	4.39
PF03050	DDE_Tnp_IS66	4.39
PF02223	Thymidylate_kin	1.75
PF13186	SPASM	0.88
PF13243	SQHop_cyclase_C	0.88
PF00285	Citrate_synt	0.88
PF05488	PAAR_motif	0.88
PF00266	Aminotran_5	0.88
PF03739	LptF_LptG	0.88
PF01797	Y1_Tnp	0.88
PF01527	HTH_Tnp_1	0.88
PF13751	DDE_Tnp_1_6	0.88
PF00198	2-oxoacid_dh	0.88
PF01075	Glyco_transf_9	0.88
PF07940	Hepar_II_III	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	67.54
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	1.75
COG0372	Citrate synthase	Energy production and conversion [C]	0.88
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.88
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.88
COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG5360	Uncharacterized conserved protein, heparinase superfamily	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	28.07 %
Unclassified	root	N/A	11.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	28.07 %
Unclassified	root	N/A	11.40 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	21.93 %
Unclassified	root	N/A	11.40 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.75 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	21.93 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.75 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	21.05 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Mycetohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans	0.88 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	20.18 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.88 %
Mycetohabitans rhizoxinica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans → Mycetohabitans rhizoxinica	0.88 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	20.18 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Opitutaceae bacterium TSB47	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	0.88 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.88 %
Mycetohabitans rhizoxinica HKI 454	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans → Mycetohabitans rhizoxinica → Mycetohabitans rhizoxinica HKI 454	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10296952	Not Available	503	Open in IMG/M
3300003852\|Ga0031655_10289682	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300004067\|Ga0055485_10123630	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300004080\|Ga0062385_10156689	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300004080\|Ga0062385_10655554	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300004091\|Ga0062387_100539237	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300004092\|Ga0062389_100526301	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300004092\|Ga0062389_103239890	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300004092\|Ga0062389_104642570	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005439\|Ga0070711_100170510	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300005458\|Ga0070681_10219369	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300005541\|Ga0070733_10703886	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005591\|Ga0070761_10295745	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300006055\|Ga0097691_1175705	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006176\|Ga0070765_102005777	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006638\|Ga0075522_10001240	All Organisms → cellular organisms → Bacteria	19436	Open in IMG/M
3300009175\|Ga0073936_10628853	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009175\|Ga0073936_10689298	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009506\|Ga0118657_11591152	Not Available	768	Open in IMG/M
3300009549\|Ga0116137_1178262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	576	Open in IMG/M
3300009610\|Ga0105340_1162323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	926	Open in IMG/M
3300009640\|Ga0116126_1190592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans → Mycetohabitans rhizoxinica → Mycetohabitans rhizoxinica HKI 454	665	Open in IMG/M
3300010339\|Ga0074046_10444919	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300010341\|Ga0074045_10402819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300010341\|Ga0074045_10558696	Not Available	732	Open in IMG/M
3300010343\|Ga0074044_10247065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1178	Open in IMG/M
3300010343\|Ga0074044_10436894	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300010343\|Ga0074044_11089687	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010379\|Ga0136449_100457866	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300014151\|Ga0181539_1168197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	862	Open in IMG/M
3300014155\|Ga0181524_10145353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1236	Open in IMG/M
3300014155\|Ga0181524_10411745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	588	Open in IMG/M
3300014156\|Ga0181518_10459724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	607	Open in IMG/M
3300014158\|Ga0181521_10205864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1073	Open in IMG/M
3300014159\|Ga0181530_10215945	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300014161\|Ga0181529_10039259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	3482	Open in IMG/M
3300014162\|Ga0181538_10051460	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
3300014492\|Ga0182013_10102201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1932	Open in IMG/M
3300014498\|Ga0182019_10701939	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300014501\|Ga0182024_10351351	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300014501\|Ga0182024_10354576	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300014501\|Ga0182024_11543183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	756	Open in IMG/M
3300014501\|Ga0182024_11991982	Not Available	642	Open in IMG/M
3300014501\|Ga0182024_12482494	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300014502\|Ga0182021_11248887	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300014838\|Ga0182030_10093242	All Organisms → cellular organisms → Bacteria	4228	Open in IMG/M
3300014838\|Ga0182030_10227254	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300014838\|Ga0182030_11648550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	522	Open in IMG/M
3300014839\|Ga0182027_11867673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	579	Open in IMG/M
3300015206\|Ga0167644_1032136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2096	Open in IMG/M
3300017925\|Ga0187856_1296524	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300017931\|Ga0187877_1087470	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300017935\|Ga0187848_10036797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2432	Open in IMG/M
3300017988\|Ga0181520_10031866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	5501	Open in IMG/M
3300018002\|Ga0187868_1098071	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300018016\|Ga0187880_1089887	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300018016\|Ga0187880_1136942	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300018023\|Ga0187889_10176257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	997	Open in IMG/M
3300018024\|Ga0187881_10213412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	818	Open in IMG/M
3300018025\|Ga0187885_10282618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	753	Open in IMG/M
3300018033\|Ga0187867_10283289	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300018033\|Ga0187867_10824541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	502	Open in IMG/M
3300020021\|Ga0193726_1022584	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300021142\|Ga0214192_1003466	All Organisms → cellular organisms → Bacteria	7817	Open in IMG/M
3300022555\|Ga0212088_10041284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5213	Open in IMG/M
3300022555\|Ga0212088_10113558	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300022555\|Ga0212088_10855707	Not Available	516	Open in IMG/M
3300022850\|Ga0224552_1046934	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025862\|Ga0209483_1002676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12233	Open in IMG/M
3300025912\|Ga0207707_10406664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1168	Open in IMG/M
3300025916\|Ga0207663_10287834	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300025947\|Ga0210067_1026623	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300027737\|Ga0209038_10012711	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300027768\|Ga0209772_10206264	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300027803\|Ga0209910_10005225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	844	Open in IMG/M
3300027853\|Ga0209274_10213338	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300027854\|Ga0209517_10017264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7056	Open in IMG/M
3300027854\|Ga0209517_10269013	Not Available	1011	Open in IMG/M
3300027896\|Ga0209777_10054501	All Organisms → cellular organisms → Bacteria	3596	Open in IMG/M
3300027896\|Ga0209777_10104621	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300028573\|Ga0265334_10004554	All Organisms → cellular organisms → Bacteria	6147	Open in IMG/M
3300028573\|Ga0265334_10151786	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300028577\|Ga0265318_10153294	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300028800\|Ga0265338_10139492	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300028800\|Ga0265338_10199337	Not Available	1510	Open in IMG/M
3300029943\|Ga0311340_11458883	Not Available	538	Open in IMG/M
3300029952\|Ga0311346_11217374	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300030399\|Ga0311353_10660930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	907	Open in IMG/M
3300030503\|Ga0311370_10226003	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300030503\|Ga0311370_12446038	Not Available	504	Open in IMG/M
3300030520\|Ga0311372_12042938	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300030862\|Ga0265753_1009774	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300031234\|Ga0302325_10568821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1682	Open in IMG/M
3300031234\|Ga0302325_10866085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1261	Open in IMG/M
3300031234\|Ga0302325_13175002	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031241\|Ga0265325_10469725	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031261\|Ga0302140_11147057	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031524\|Ga0302320_10995069	Not Available	891	Open in IMG/M
3300031524\|Ga0302320_11365253	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031524\|Ga0302320_11723960	Not Available	602	Open in IMG/M
3300031525\|Ga0302326_13362951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300031708\|Ga0310686_100281561	Not Available	697	Open in IMG/M
3300031708\|Ga0310686_112986237	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031708\|Ga0310686_115788800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	702	Open in IMG/M
3300031711\|Ga0265314_10595539	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031726\|Ga0302321_101992876	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300032118\|Ga0315277_10002489	All Organisms → cellular organisms → Bacteria	25720	Open in IMG/M
3300032160\|Ga0311301_10570500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1645	Open in IMG/M
3300032256\|Ga0315271_11784082	Not Available	528	Open in IMG/M
3300032783\|Ga0335079_11977621	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300033158\|Ga0335077_11056459	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300033433\|Ga0326726_10613306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1047	Open in IMG/M
3300033486\|Ga0316624_12157908	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300034124\|Ga0370483_0118712	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.86%
Host-Associated	Host-Associated	6.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.39%
Aquatic	Environmental → Aquatic	39.47%
Plants	Host-Associated → Plants	6.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.47%
Freshwater	Environmental → Aquatic → Freshwater	35.96%
Peat	Environmental → Terrestrial → Peat	14.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.14%
Marine	Environmental → Aquatic → Marine	2.63%
Sediment	Environmental → Aquatic → Sediment	0.88%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.16%
Lake	Environmental → Aquatic → Freshwater → Lake	6.14%
Loam	Environmental → Terrestrial → Soil → Loam	6.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.14%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.51%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.51%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.75%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.88%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	6.14%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.26%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	4.39%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.39%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.51%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.63%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.75%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.88%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022850	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 1-5	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025947	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102969521	3300000567	Peatlands Soil	YGVGLSTLSKWSRCEDKATLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLQALPC*
Ga0031655_102896822	3300003852	Freshwater Lake Sediment	LLTRFHHNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWIVRLQNSSDVQMLPALLRALPC*
Ga0055485_101236301	3300004067	Natural And Restored Wetlands	QRAFAGRHGIGLSTLGKWLRAEGQATLPPVKFREVVLPNTPLRYAVEVVSPQGWIVRLQNSSEVQTLPQLLQALPC*
Ga0062385_101566891	3300004080	Bog Forest Soil	MISSKSSLVRRRLTPLQRQRLVVRFHKGQLTQRDFAARHGVGLSTLSKWLRVESETASPPVKFREVTLPNTPLRYAVEVVSPKGWTVRLQNSSDVVSMPQLLQALPC*
Ga0062385_106555542	3300004080	Bog Forest Soil	RFHQSQLTQRDFAGKHGVGLSTLSKWLRVENEAPSPPMKFQEVTLPKMSRRYAVEVVSPQGWTVRLQNGSDVQQLPALLQALPC*
Ga0062387_1005392371	3300004091	Bog Forest Soil	LTQRDFATRYGMGLSTLSKWLRVENEAASPPVKFQEVILPSAPMRYAVEVVSPQGWTVRLQNSSEIETVAQLLQALPC*
Ga0062389_1005263012	3300004092	Bog Forest Soil	LTQRDFANLHGVGLSTLSKWLRVESDASPPPVKFQEVTLPNMPLRYAVEVVSPQGWIVRLQNGSDVQQLPALLQALPC*
Ga0062389_1032398902	3300004092	Bog Forest Soil	MTQRDFAVRHGIGMSTLSKWLRVENEATPSPVKFQEVKLCNTPLRYAVEVVSPHGWTVRLQNSSEVESLPQLLQALPC*
Ga0062389_1046425702	3300004092	Bog Forest Soil	GMYSPKSGSVQRRRTPEQRQRLLARFHKSQMTQRDFSVRHGIGMSTLSKWLRVEVKPKQPRVKFQEVMMPNTPLRFAVEVVSPQGWIVRLHDGSDVQSLSSLLQALPC*
Ga0070711_1001705101	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MYSSKTGSVRRRKTSAERQKLLAHFHQSQMTQRDFATRHGVGLSTLSKWLRCEDKITLPPMKFHEVTLPHTPLRYSVELVSPQGWTVRLQNTSDIESLPQLLQALPC*
Ga0070681_102193693	3300005458	Corn Rhizosphere	MVSSKSNQVRRRLTSQQRQRLLARFHESQMTQRDFAIRHGVGLSTLSKWLQREDKTVMPPVKFQEVTLPHTPLRYAVELVSPKGWTVRLQNTSDIELLPQLLQALPC*
Ga0070733_107038863	3300005541	Surface Soil	VGLSTLSKWLRCEDKTSMPPVKFQEVTLPHTPLRYAVELVSPQGWTLRLQNASDIESLPQLLQAPPC*
Ga0070761_102957453	3300005591	Soil	KQRQRFLARFHQSQLTQRDFATRFGVGLSTLSKWLRVENEPTSPPVKFQEVTLPKISQCYAVEVVSPQGWTVRLQHSAEIKTLAEVLQSLPC*
Ga0097691_11757052	3300006055	Arctic Peat Soil	TGAGDFDCLLSLGLSTLSKWLRCEGKAPLPSVKFQEIVLPTMPLGYAVEVVSPQGWIVRLQNSAAVPSLPQLLQALPC*
Ga0070765_1020057771	3300006176	Soil	SQLTQRDFANHHGVGLSTLSKWLRVENEAASPPVKFQEVILPNAPMRYAVEVVSPQGWTVRLQNSSEIETLAQVLQSLPC*
Ga0075522_100012409	3300006638	Arctic Peat Soil	MYSSKSRPGRRRWTVKQRQRLLAGFHESQQRGFASRHGVGLSTLSKWLRVESETISPPVKFQEVTLPKMPPRYAVEVVSPQGWTVRLQSGSDVQQLAALLQALPC*
Ga0073936_106288531	3300009175	Freshwater Lake Hypolimnion	LLARYHKGQLTQRDFATRHGIGLSTFSKWLRCEDKTAIPPVKFHEVTLPHPPLRYAVELVSPQGWTVRLQSSSDIESLHELLQALPC*
Ga0073936_106892982	3300009175	Freshwater Lake Hypolimnion	MNYSKPVSARRRKTAQQRHRLVTRFHHSQLTQRQFAARHGIGLSTLSKWLRRESKQSLPPVKFQEMTLPSVTPRWAVEVVSPQGWVIRLQNSTEVPTLPQLLLAVPC*
Ga0118657_115911522	3300009506	Mangrove Sediment	MNTSKTGFVRQRKTPTERQRLVARFHESQMTQRDFATRHSIGLSTLGKWLRLESTAPSPRVKFKEVVLPNTSLRCAVEVVSPQGWIVRLHNSSETHTLSQVLQALPC*
Ga0116137_11782623	3300009549	Peatland	HQSQLTQRDFATRHGLGLSTLSKWLRVENEAASPPVKFQEVTLPNMPLRYAVEVVSPQGWTVRLQNSSKIETLPQLLQALPC*
Ga0105340_11623232	3300009610	Soil	LLARFQESQLTQRDFAGKHGVGLSTLSKWLRVESEAAPAPMKFQEVTLPKMPPRYQVEVVSPQGWIVRLQNNSEIETLAQLLQALPC*
Ga0116126_11905921	3300009640	Peatland	QSQLTQRDFAGRHGVGLSTLSKWLRVESTAVAPPVKFQEVVLPNPPLRYAVGVVSPQGWTVRLQNGSEIETLPQLLRALPC*
Ga0074046_104449191	3300010339	Bog Forest Soil	EMTQRDFATRYGVGLSTLSKWLRCGDKASLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIESLPQLLQALPC*
Ga0074045_104028192	3300010341	Bog Forest Soil	MTQRDFAVRHGIGMSTLSKWLRVEVTPKLPRVEFQEVVLPNTPLRYAVEVVSPHGWTVRLQNSSEVESLPQVLQ
Ga0074045_105586961	3300010341	Bog Forest Soil	MTQRDFAARHSIGLSTLSKWLRVELKPKAPRVLFQEVVVPNAPPRYAVEVVSPQGWTVRLQNGPEVQTLSQVLQALPC*
Ga0074044_102470653	3300010343	Bog Forest Soil	RRRTPEQRQRVLARFRKSQMTQRDFAVRHGIGMSTLSKWLRVEVKPRLPRVKFQEVVLPNTPLRYAVEVVSPHGWTVRLQNSSEVESLPQVLQALPC*
Ga0074044_104368941	3300010343	Bog Forest Soil	MKSWRHGFIKNGSGRRHWTSKQRQRLLTRFHQNEMTQRDFTTRYGVGLSTLSKWLGCEDKATLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNDSGIETLTQVLQALPC*
Ga0074044_110896871	3300010343	Bog Forest Soil	RHGIGMSTLSKWLRCEDKAASPPMKFQEVVLPNTPLRYVVEVVSPKGWTVRLQNGSDVESLSQLLQALPC*
Ga0136449_1004578663	3300010379	Peatlands Soil	MTQREFATCYGVGLSTLSKWLRCEDKASLPLVRFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQL
Ga0181539_11681973	3300014151	Bog	GRHGVGLSTLNKWLRVESETPSPPLKFQEVTLHNMPMRCAVEVVSPQGWTVRLQNGSEIETLPQLLRALPC*
Ga0181524_101453533	3300014155	Bog	LLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKATLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0181524_104117452	3300014155	Bog	HESQLTQRDFAGRHGVGLSTLNKWLRVESETPSPPLKFQEVTLHNMPMRCAVEVVSPQGWTVRLQNGSEIETLPQLLQALPC*
Ga0181518_104597242	3300014156	Bog	GRRRWTSKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKATLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0181521_102058642	3300014158	Bog	LTRRDFATRHGVGLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMLYAVEVGSTQGGTVRLQNSSEIETLAQLLQALPC*
Ga0181530_102159452	3300014159	Bog	VVAQAHTKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0181529_100392594	3300014161	Bog	MKYSKSGSGRRRLTDKQRQRLLARFHQSQSTQRDFAGRHGVGLSTLSKWLRVESDGPPSPVKFQEVTLPNMPQRYAVEVVSPQGWTVRLQNSSEIETLPQLLQALPC*
Ga0181538_100514603	3300014162	Bog	VVAQAHTKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNTSEIQGLPQLLRALPC*
Ga0182013_101022013	3300014492	Bog	MNSSKTGLVRRRKTSDERQRLVARFHESQMTQRDFAALHGIGLSTLSKWLRVEVKPKPPCVKFQEVVMPNTPLLYAVEVVSPQGWTVRLQNGSDVQMLPSVLRALPC*
Ga0182019_107019392	3300014498	Fen	LVARFRESQLNQRDFATRYGVGLSTLSKWLRIESETSPPSVKFQEVTLPNMPLRYQVEVVSPQGWTVRLQNGSDVQLLPALLRALPC*
Ga0182024_103513513	3300014501	Permafrost	MYSSKSGSGRRRRTVKQRRRLLARFHQSQLTQRDFARRHGVGLSTLSKWLRVENATDSPPVKFQEVTLPNVPLRYAVEMVSPQDWTVRLQNSSEIETLVQLLQALPC*
Ga0182024_103545763	3300014501	Permafrost	GRHGVGLSTLSKWLRVESETPPPPVKFQEVTLPKMPPRYAVEVVSPRGWTVRLQNGSDVQQLPALLQALPC*
Ga0182024_115431832	3300014501	Permafrost	MNFFKSGSGRRRRTAKQRQRLLARFHQSHLTQRDFATRHGVGLSTLSKWLRVEGETASPPMKFQEVVLPNMPPRYAVEVVSPQGWTVRLQNSSEIGALPKLLQALPC*
Ga0182024_119919821	3300014501	Permafrost	MTQRDFATRYGVGLSTLSKWLRVESTAVAPPVKFQEVALPTMPPRYPVEVVSPHGWIVRLQNGDSFQALSELLQALLC*
Ga0182024_124824942	3300014501	Permafrost	TQRDFANRHGVGLSTLSKWLRVESETPAPPVKFQEVRLPNTPSRYAVEVVSPQGWIVRLQNGSDVKSLPELLRALPC*
Ga0182021_112488872	3300014502	Fen	LVARFRESQLNQRDFATRYGVGLSTLSKWLRIESETSPPSVKFQEVTLPNMPLRYQVDVVSPQGWTVRLQNGSDVQQLPALLRALPC*
Ga0182030_100932421	3300014838	Bog	TSKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0182030_102272543	3300014838	Bog	MYSSKSGSGRRRRTVKQRQRLLARFHQSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEMTLPSMPPRYAVEVVSPQGWTVRLQNSSEIETLAQVLQSLPC*
Ga0182030_116485502	3300014838	Bog	VNSSKTGLVHRRKTSEERQRLLARFHESQMTQRDFAARHGIGMSTLSKWLRVEVKPKPPSVKFQEVVIPHTPLRYAVEVVSPQGWTVRLQNSSEIESLAQVLQALPC*
Ga0182027_118676732	3300014839	Fen	LTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLQALPC*
Ga0167644_10321362	3300015206	Glacier Forefield Soil	MISSKNGLVRRRLTPQQRQRVLARFHKDQLTQRDFATRHGIGLSTLSKWLRCEDKTAVPPVKFQEVTLPHTPLRYAVELVSPQGWTIRLQNPSDIESLTQLLQALPC*
Ga0187856_12965242	3300017925	Peatland	ARFHQSQLTQRDFANRHGVGLSTLSKWLRVENEATSPPVKFQEVTLPNMPMRYAVEVVSPHGWTVRLQKSSEIETLAQVLQALPC
Ga0187877_10874702	3300017931	Peatland	LLARFHQRQLTQQDFAGRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187848_100367971	3300017935	Peatland	RHGVGLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMRYAVEVVSPQGWTVRLQNSSEIETLAQLLQALPC
Ga0181520_100318666	3300017988	Bog	MKYSKSGSGRRRLTDKQRQRLLARFHQSQSTQRDFAGRHGVGLSTLSKWLRVESDGPPSPVKFQEVTLPNMPQRYAVEVVSPQGWTVRLQNSSEIETLPQLLQALPC
Ga0187868_10980713	3300018002	Peatland	VKQRQQLLARFHQSQLTQRDFANRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187880_10898873	3300018016	Peatland	RLHQSQLTQRDFAGRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187880_11369423	3300018016	Peatland	GLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMRYAVEVVSPQGWTVRLQNSSEIETLAQLLQALPC
Ga0187889_101762573	3300018023	Peatland	TQRDFAGRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187881_102134123	3300018024	Peatland	LSTLSKWLRVRGHAVPPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187885_102826182	3300018025	Peatland	VTRFHQSQLTQRDFAARHGIGLSTLGKWLRCESKTTLPSVKFQEVGLPNAAPRWAVEVVSPQGWIVRLHNSSELQTLLQLLRALPC
Ga0187867_102832891	3300018033	Peatland	QLTQRDFATRHGGGLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMRYAVEVVSPQGWTVRLQNSSEIETLAQLLQALPC
Ga0187867_108245411	3300018033	Peatland	MYSSKSGSERRRWTAKQRQRLLTRFHESQLTRRDSATRHGVGLSTQSKWLRVESEAASPPVKFQEVTLPNTPLRYAVKVISPQGWTIRLPNSSETEALPELLRALPC
Ga0193726_10225844	3300020021	Soil	MISSDSSSVRRRLTPQQRQRLLARFHKGHLTQRDFASRHGVGLSTLSKWLRCEDKRAMPPVKFQEVTLPHTPLRYAVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0214192_10034667	3300021142	Freshwater	MISSKNRSVSRRLTPQQRQRLLARFRKGQLTQRDFASRHGVGLSTLSKWLRCEGTTALPPVKFQEVTLPHTPLRCAVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0212088_100412846	3300022555	Freshwater Lake Hypolimnion	MNYSKPVSARRRKTAQQRHRLVTRFHHSQLTQRQFAARHGIGLSTLSKWLRRESKQSLPPVKFQEMTLPSVTPRWAVEVVSPQGWVIRLQNSTEVPTLPQLLLAVPC
Ga0212088_101135583	3300022555	Freshwater Lake Hypolimnion	MNSSKPVSVRRRKTTQQRHRLVTRFHHSQLTQRQFATRHGIGLSTLSKWLRHESKQSSPPVKFQEVALPSVTSRWAVEVVSPQGWVIRLQNGSEVQALPQLLRAVPC
Ga0212088_108557071	3300022555	Freshwater Lake Hypolimnion	MISSKSRSVRRRLTPQQRQRLLARYHKGQLTQRDFATRHGIGLSTFSKWLRCEDKTAIPPVKFHEVTLPHPPLRYAVELVSPQGWTVRLQSSSDIESLHELLQALPC
Ga0224552_10469341	3300022850	Soil	RRRRTVKQRQRLLARFHKSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEVTLPSMPPRYAVEVVSPQGWTVRLQNSSEIEALAQVLQSLPC
Ga0209483_100267610	3300025862	Arctic Peat Soil	MYSSKSRPGRRRWTVKQRQRLLAGFHESQQRGFASRHGVGLSTLSKWLRVESETISPPVKFQEVTLPKMPPRYAVEVVSPQGWTVRLQSGSDVQQLAALLQALPC
Ga0207707_104066642	3300025912	Corn Rhizosphere	MVSSKSNQVRRRLTSQQRQRLLARFHESQMTQRDFAIRHGVGLSTLSKWLQREDKTVMPPVKFQEVTLPHTPLRYAVELVSPKGWTVRLQNTSDIELLPQLLQALPC
Ga0207663_102878343	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SAERQKLLAHFHQSQMTQRDFATRHGVGLSTLSKWLRCEDKITLPPMKFHEVTLPHTPLRYSVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0210067_10266233	3300025947	Natural And Restored Wetlands	RAFAGRHGIGLSTLGKWLRAEGQATLPPVKFREVVLPNTPLRYAVEVVSPQGWIVRLQNSSEVQTLPQLLQALPC
Ga0209038_100127111	3300027737	Bog Forest Soil	MISSKSSLVRRRLTPLQRQRLVVRFHKGQLTQRDFAARHGVGLSTLSKWLRVESETASPPVKFREVTLPNTPLRYAVEVVSPKGWTVRLQNSSDVVSMPQLLQALPC
Ga0209772_102062642	3300027768	Bog Forest Soil	TLSKWLRVENETPSPPVNFQEVILPNTPMRYAVEVVSPQGWTVRLQNSAEIHNLPQLLQALPC
Ga0209910_100052252	3300027803	Thawing Permafrost	MYSSKSGSGRRRRTVKQRQRLLARFHQSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEMTLPSMPPRYAVEVVSPQGWTVRLQNSSEIETLAQVLQSLPC
Ga0209274_102133381	3300027853	Soil	WTAKQRQRFLALFHQSQLTQRDFASRHGVGLSTLSKWLRVESEAVSPSVKFQEMTLPSMPPRYALEVVSPQGWTVRLQNSSEIETLAQVLQALPC
Ga0209517_1001726411	3300027854	Peatlands Soil	MTQRDFATRYGVGLSTLSKWSRCEDKATLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLQALPC
Ga0209517_102690132	3300027854	Peatlands Soil	MNSSKSGSGHRRWTAKQRQRLLARFRQSEMTQRDFATRYSVGLSTSSKWLRVESTAAAPPVKFQEVVLPNALLHYPVEVVSPHGWIVRLQNDTAVQALSELLQALPC
Ga0209777_100545014	3300027896	Freshwater Lake Sediment	RHGIGLSTLSKWLRVESEAPSPPVKFQEVTLPNIPLRYAVEVVSPQGWTVRLQNGSDVQRLPALLQALPC
Ga0209777_101046211	3300027896	Freshwater Lake Sediment	MDYSKTGSGRRRWTSKQRQRLLTRFHHNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWIVRLQNSSDVQMLPALLRALPC
Ga0265334_100045542	3300028573	Rhizosphere	MVSSKSNQVRRRLTSQQRQRLLARFHESQMTQRDFATRHGVGLSTLSKWLRCEDKTAMPPVKFHEVTLPHTPLRYAMELVSPKGWTVRLQNSSDVESLTQLLQALPC
Ga0265334_101517862	3300028573	Rhizosphere	MISSKSRSVRRRLTLQQRQRLLARFHKGQLTQRDFASRQGVGLSTLSKWLRWEDKTTLPPMKFQEVTLPHTPLRYSVELVSPQGWTVRLQNASDIESLPQLLQALPC
Ga0265318_101532941	3300028577	Rhizosphere	RDFATRHGVGLSTLSKWLRCEDKTAMPPVKFHEVTLPHTPLRYAMELVSPKGWTVRLQNSSDVESLTQLLQALPC
Ga0265338_101394923	3300028800	Rhizosphere	LSKWLRCEDKTTIPLMQFQEVSLPHTPLRYSVELVSPQGWTVRLHNASHIDFLPQLLQALPC
Ga0265338_101993373	3300028800	Rhizosphere	MTQRDFAVRHGIGMSTLSKWLGCGDKADLAPVKFREVVLPNTPLRFTVEVVSPQGWIVRLQNGSDVQMLPD
Ga0311340_114588832	3300029943	Palsa	MNYSKSGSGRRRWTSKQRQRLLARFHKSQLTQRDFAGLHGIGLSTLSKWLRVESETPSPPVKFQEVTLPNMPPRYPVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0311346_112173741	3300029952	Bog	QSQLTQRDFAGRHGVGLSTLSKWLRVESEAAPPPVKFQEVTLPNMPPRYTVEVVSPQGWTVRLHNSSEIETLPKVLQALPC
Ga0311353_106609302	3300030399	Palsa	MISSKNGLVRRRLTPQQRKRLLVRFDKGQLTQRDFATRHGIGLSTLSKWLRCEDKTVMPPVKFQEVTLPHTPLRYSVEVVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0311370_102260033	3300030503	Palsa	GLSTLSKWLRVEGEAASPPVKFQEVVLPNMSPRYAVEVVSPQGWTVRLQNSSEIEALPHLLQALPC
Ga0311370_124460381	3300030503	Palsa	MTQRDFAVRHSIGLSTLSKWLRVEAKSKPPSVKFQKVVMPNAPLRFAMDVVSPKGWTVRLQNGSDVESLPQLLQALPC
Ga0311372_120429382	3300030520	Palsa	SQLTQGDFANRHGIGLSTLSKWLRVASETPVPAVKFQELTLPQMPQRFPVEVVSPQGWTVRLQNGSEIETLSQLLQALPC
Ga0265753_10097742	3300030862	Soil	LTQRDFASRHGVGLSTLSKWLRDESETTSPPLKFQEVILPDTAVRYVVEVVSPQGWTVRLQNTSEIETLAQLLQALPC
Ga0302325_105688213	3300031234	Palsa	LARFHESQLTQRDFAGRHGVGLSTLSKWLRVESEAASPPVKFQEVTLPNMRQRYAVEVVSPQGWTVRLQNGSG
Ga0302325_108660851	3300031234	Palsa	MTQRDFAVHHGIGMSTLSKWLRAEVKPKPPRVKFQEVVLPNTPLRYAVEVVSPHGWTVRLQSSSEVQTLSQVLQALPC
Ga0302325_131750022	3300031234	Palsa	KQRQRLLARFHKSQLTQRDFAGLHGIGLSTLSKWLRVESETPSPPVKFQEVTLPNMPPRYPVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0265325_104697251	3300031241	Rhizosphere	NRHGVGLSTLSKWLRVESEAAPPPVKFQEVTLANMPLRHAVEVVSPQGWIVRLQNGSEIETLAQVLQALPC
Ga0302140_111470571	3300031261	Bog	RLLARFHESPLTQRDFATRHGVGLSTLSKWLRVESEAAPAPMKFQEVTLPKLPPRYPVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0302320_109950691	3300031524	Bog	MISSKNGLVRRRLTPQQRQRLLARFHKDQLTQRDFSNRHGIGLSTLSKWLRCEDKTTLPPVKFREVTLPHTPLRYAVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0302320_113652532	3300031524	Bog	MYSSKSGSGRRRRTVKQRQRLLARFHKSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEVTLPSMPPRYAVEVVSPQGWTVRLQNSSEIEALAQVLQSLPC
Ga0302320_117239602	3300031524	Bog	MISSKSGSVRRRLTSQQRQLLLARFRKGQLTQRDFASRHGVGLSTLSKWLRCEDKTTMPPVKFQEVTLPHTPLRYPVELVSPQGWTVRLQNASDIESL
Ga0302326_133629511	3300031525	Palsa	MTQRDFATRYGVGLSTLSKWLRVESKAAEPPVQFQEVVVPNMPMRYAVEVVSPQGWTVRLQNGSDVQELPALLRAL
Ga0310686_1002815611	3300031708	Soil	MYSSKSGSGRRRRTVKQRRRLLARFHQSQLTQRDFARRHGVGLSTMSKWLRVENATDSPPVKFQEVTLPNVPLRYAVEMVSPQDWTVRLQNSSEIETLVQLLQALPC
Ga0310686_1129862372	3300031708	Soil	QRDFANRHGVGLYTLSKWLRVESETPSPPVKFQEVTLPNMPLRYAVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0310686_1157888002	3300031708	Soil	MNSSKTGLVRRRKTSEERQRLLARFHESQMTQRDFAARHGIGMSTLSKWLRVEVKPKPPRVKFQEVVMPNTPLRYAVEVVSPQGWTVRLQNGSDVLILPSVLRTLPC
Ga0265314_105955392	3300031711	Rhizosphere	HKGQLTQRDFASRQGVGLSTLSKWLRWEDKTTLPPMKFQEVTLPHTPLRYSVELVSPQGWTVRLQNASDIESLPQLLQALPC
Ga0302321_1019928762	3300031726	Fen	MKFSESGLVRRRKTPAERQRLVARFRESQMTQREFAARHGMGLSTLGKWLRGAGQSNPSPVNFQEVVLPNTALRYAVEVVNPQGWIVRLQDASAVEPLPTLLRALPC
Ga0315277_1000248921	3300032118	Sediment	MNVSKNGQVRRRKTFEQRQRLLARFHQSQLTQRDFAARHGIGLSTLGKWLPVESTATLPPVNFNEVVLPHTPRRYAVEVVSPQGWIVQLQVGSEVQMLPQLLQALRC
Ga0311301_105705001	3300032160	Peatlands Soil	KSGSGRRRWTAKQRQRLLARFRQSEMTQRDFATRYSVGLSTSSKWLRVESTAAAPPVKFQEVVLPNALLHYPVEVVSPHGWIVRLQNDTAVQALSELLQALPC
Ga0315271_117840822	3300032256	Sediment	MDSFKTGSGRRRWTSKERHQLLARFHQSQLTQRAFAARHGIGLSTLGKWLRVQAQATLPLVKFQEVVLPNTPLRYAVEVVSPQGWIVRLQHSSEVQTLPPLLQALPC
Ga0335079_119776212	3300032783	Soil	DFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC
Ga0335077_110564591	3300033158	Soil	VGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC
Ga0326726_106133063	3300033433	Peat Soil	NGLVRRRRTSKQRRRLLACFHESQLTQQDFAARHGIGLSTLGKWLRVESKATLPPVEFEEVILPNTQLRYAVEVVSSRGWIVRLQNSSEVHTLPQLLQALPC
Ga0316624_121579081	3300033486	Soil	RDFAARHGIGLSTLGKWLRLESTAPSPPVKFTEVVLPNTSLRYPVEVISPQGWVVRLQNGSELHTLSEVLQALPC
Ga0370483_0118712_365_688	3300034124	Untreated Peat Soil	MYSPKSGSVRRRRTPEQRQRVLARFRKSQMTQRDFAVRHGIGMSTLSKWLRVESEAAPSPVKFQEVKLPNMPLRYAIEVVSPQGWTVRLQNGADVESLPQLLQALPC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences