Metagenome / Metatranscriptome Family F081557

Basic Information
Family ID	F081557
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	90 residues
Representative Sequence	HQSQLTQRDFATRHGLGLSTLSKWLRVENEAASPPVKFQEVTLPNMPLRYAVEVVSPQGWTVRLQNSSKIETLPQLLQALPC
Number of Associated Samples	85
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	81.58 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (88.596 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (9.649 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.474 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 1JGI12270J11330_102969521 2Ga0031655_102896822 3Ga0055485_101236301 4Ga0062385_101566891 5Ga0062385_106555542 6Ga0062387_1005392371 7Ga0062389_1005263012 8Ga0062389_1032398902 9Ga0062389_1046425702 10Ga0070711_1001705101 11Ga0070681_102193693 12Ga0070733_107038863 13Ga0070761_102957453 14Ga0097691_11757052 15Ga0070765_1020057771 16Ga0075522_100012409 17Ga0073936_106288531 18Ga0073936_106892982 19Ga0118657_115911522 20Ga0116137_11782623 21Ga0105340_11623232 22Ga0116126_11905921 23Ga0074046_104449191 24Ga0074045_104028192 25Ga0074045_105586961 26Ga0074044_102470653 27Ga0074044_104368941 28Ga0074044_110896871 29Ga0136449_1004578663 30Ga0181539_11681973 31Ga0181524_101453533 32Ga0181524_104117452 33Ga0181518_104597242 34Ga0181521_102058642 35Ga0181530_102159452 36Ga0181529_100392594 37Ga0181538_100514603 38Ga0182013_101022013 39Ga0182019_107019392 40Ga0182024_103513513 41Ga0182024_103545763 42Ga0182024_115431832 43Ga0182024_119919821 44Ga0182024_124824942 45Ga0182021_112488872 46Ga0182030_100932421 47Ga0182030_102272543 48Ga0182030_116485502 49Ga0182027_118676732 50Ga0167644_10321362 51Ga0187856_12965242 52Ga0187877_10874702 53Ga0187848_100367971 54Ga0181520_100318666 55Ga0187868_10980713 56Ga0187880_10898873 57Ga0187880_11369423 58Ga0187889_101762573 59Ga0187881_102134123 60Ga0187885_102826182 61Ga0187867_102832891 62Ga0187867_108245411 63Ga0193726_10225844 64Ga0214192_10034667 65Ga0212088_100412846 66Ga0212088_101135583 67Ga0212088_108557071 68Ga0224552_10469341 69Ga0209483_100267610 70Ga0207707_104066642 71Ga0207663_102878343 72Ga0210067_10266233 73Ga0209038_100127111 74Ga0209772_102062642 75Ga0209910_100052252 76Ga0209274_102133381 77Ga0209517_1001726411 78Ga0209517_102690132 79Ga0209777_100545014 80Ga0209777_101046211 81Ga0265334_100045542 82Ga0265334_101517862 83Ga0265318_101532941 84Ga0265338_101394923 85Ga0265338_101993373 86Ga0311340_114588832 87Ga0311346_112173741 88Ga0311353_106609302 89Ga0311370_102260033 90Ga0311370_124460381 91Ga0311372_120429382 92Ga0265753_10097742 93Ga0302325_105688213 94Ga0302325_108660851 95Ga0302325_131750022 96Ga0265325_104697251 97Ga0302140_111470571 98Ga0302320_109950691 99Ga0302320_113652532 100Ga0302320_117239602 101Ga0302326_133629511 102Ga0310686_1002815611 103Ga0310686_1129862372 104Ga0310686_1157888002 105Ga0265314_105955392 106Ga0302321_1019928762 107Ga0315277_1000248921 108Ga0311301_105705001 109Ga0315271_117840822 110Ga0335079_119776212 111Ga0335077_110564591 112Ga0326726_106133063 113Ga0316624_121579081 114Ga0370483_0118712_365_688
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 1JGI12270J11330_102969521 2Ga0031655_102896822 3Ga0055485_101236301 4Ga0062385_101566891 5Ga0062385_106555542 6Ga0062387_1005392371 7Ga0062389_1046425702 8Ga0070711_1001705101 9Ga0070761_102957453 10Ga0097691_11757052 11Ga0075522_100012409 12Ga0073936_106288531 13Ga0073936_106892982 14Ga0118657_115911522 15Ga0074045_104028192 16Ga0074045_105586961 17Ga0074044_102470653 18Ga0074044_104368941 19Ga0181539_11681973 20Ga0181529_100392594 21Ga0182013_101022013 22Ga0182024_119919821 23Ga0182024_124824942 24Ga0182021_112488872 25Ga0187877_10874702 26Ga0187881_102134123 27Ga0187885_102826182 28Ga0187867_108245411 29Ga0209772_102062642 30Ga0209517_102690132 31Ga0265318_101532941 32Ga0265338_101394923 33Ga0265338_101993373 34Ga0311372_120429382 35Ga0302325_105688213 36Ga0302320_117239602 37Ga0302321_1019928762 38Ga0315277_1000248921 39Ga0315271_117840822 40Ga0326726_106133063
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82 1Ga0116137_11782623 2Ga0055485_101236301 3Ga0062385_101566891 4Ga0062385_106555542 5Ga0062387_1005392371 6Ga0062389_1005263012 7Ga0062389_1032398902 8Ga0062389_1046425702 9Ga0070711_1001705101 10Ga0070681_102193693 11Ga0070761_102957453 12Ga0097691_11757052 13Ga0075522_100012409 14Ga0073936_106288531 15Ga0073936_106892982 16Ga0118657_115911522 17Ga0105340_11623232 18Ga0116126_11905921 19Ga0074045_105586961 20Ga0074044_102470653 21Ga0074044_104368941 22Ga0074044_110896871 23Ga0181524_101453533 24Ga0181524_104117452 25Ga0182013_101022013 26Ga0182024_103513513 27Ga0182024_115431832 28Ga0182024_119919821 29Ga0182024_124824942 30Ga0182021_112488872 31Ga0182030_116485502 32Ga0187856_12965242 33Ga0187877_10874702 34Ga0181520_100318666 35Ga0187885_102826182 36Ga0187867_102832891 37Ga0187867_108245411 38Ga0193726_10225844 39Ga0212088_101135583 40Ga0224552_10469341 41Ga0209772_102062642 42Ga0209274_102133381 43Ga0209517_102690132 44Ga0209777_101046211 45Ga0265334_100045542 46Ga0265334_101517862 47Ga0265338_101394923 48Ga0265338_101993373 49Ga0311340_114588832 50Ga0311346_112173741 51Ga0311370_124460381 52Ga0311372_120429382 53Ga0265753_10097742 54Ga0302325_105688213 55Ga0302325_108660851 56Ga0265325_104697251 57Ga0302140_111470571 58Ga0302320_109950691 59Ga0302326_133629511 60Ga0302321_1019928762 61Ga0315277_1000248921 62Ga0315271_117840822 63Ga0326726_106133063 64Ga0316624_121579081 65Ga0370483_0118712_365_688
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.91% β-sheet: 15.45% Coil/Unstructured: 53.64%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF05717	TnpB_IS66	63.16
PF13817	DDE_Tnp_IS66_C	4.39
PF03050	DDE_Tnp_IS66	4.39
PF02223	Thymidylate_kin	1.75
PF13186	SPASM	0.88
PF13243	SQHop_cyclase_C	0.88
PF00285	Citrate_synt	0.88
PF05488	PAAR_motif	0.88
PF00266	Aminotran_5	0.88
PF03739	LptF_LptG	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	67.54
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	1.75
COG0372	Citrate synthase	Energy production and conversion [C]	0.88
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.88
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.88
COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG5360	Uncharacterized conserved protein, heparinase superfamily	General function prediction only [R]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	28.07 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	28.07 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.75 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.88 %
Unclassified	root	N/A	11.40 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.63 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	21.93 %

Name	Rank	Taxonomy	Distribution
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.75 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.88 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	21.93 %

Name	Rank	Taxonomy	Distribution
Mycetohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans	0.88 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.88 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	21.05 %

Name	Rank	Taxonomy	Distribution
Mycetohabitans rhizoxinica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans → Mycetohabitans rhizoxinica	0.88 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.88 %
Unclassified	root	N/A	11.40 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	0.88 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	20.18 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %

Name	Rank	Taxonomy	Distribution
Mycetohabitans rhizoxinica HKI 454	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Mycetohabitans → Mycetohabitans rhizoxinica → Mycetohabitans rhizoxinica HKI 454	0.88 %
Opitutaceae bacterium TSB47	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	0.88 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.88 %
Unclassified	root	N/A	11.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.63 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	20.18 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10296952	Not Available	503	Open in IMG/M
3300003852\|Ga0031655_10289682	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300004067\|Ga0055485_10123630	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300004080\|Ga0062385_10156689	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300004080\|Ga0062385_10655554	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300004091\|Ga0062387_100539237	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300004092\|Ga0062389_100526301	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300004092\|Ga0062389_103239890	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300004092\|Ga0062389_104642570	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005439\|Ga0070711_100170510	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M

Showing 1 to 10 of 114 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.86%
Host-Associated	Host-Associated	6.14%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	39.47%
Plants	Host-Associated → Plants	6.14%
Terrestrial	Environmental → Terrestrial	54.39%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	35.96%
Marine	Environmental → Aquatic → Marine	2.63%
Peat	Environmental → Terrestrial → Peat	14.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.14%
Sediment	Environmental → Aquatic → Sediment	0.88%
Soil	Environmental → Terrestrial → Soil	39.47%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	6.14%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.51%
Loam	Environmental → Terrestrial → Soil → Loam	6.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.18%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.63%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.56%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.75%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.89%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.39%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.51%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.02%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.63%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.88%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	4.39%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.63%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.88%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	4.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	6.14%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M

Showing 1 to 10 of 85 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102969521	3300000567	Peatlands Soil	YGVGLSTLSKWSRCEDKATLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLQALPC*
Ga0031655_102896822	3300003852	Freshwater Lake Sediment	LLTRFHHNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWIVRLQNSSDVQMLPALLRALPC*
Ga0055485_101236301	3300004067	Natural And Restored Wetlands	QRAFAGRHGIGLSTLGKWLRAEGQATLPPVKFREVVLPNTPLRYAVEVVSPQGWIVRLQNSSEVQTLPQLLQALPC*
Ga0062385_101566891	3300004080	Bog Forest Soil	MISSKSSLVRRRLTPLQRQRLVVRFHKGQLTQRDFAARHGVGLSTLSKWLRVESETASPPVKFREVTLPNTPLRYAVEVVSPKGWTVRLQNSSDVVSMPQLLQALPC*
Ga0062385_106555542	3300004080	Bog Forest Soil	RFHQSQLTQRDFAGKHGVGLSTLSKWLRVENEAPSPPMKFQEVTLPKMSRRYAVEVVSPQGWTVRLQNGSDVQQLPALLQALPC*
Ga0062387_1005392371	3300004091	Bog Forest Soil	LTQRDFATRYGMGLSTLSKWLRVENEAASPPVKFQEVILPSAPMRYAVEVVSPQGWTVRLQNSSEIETVAQLLQALPC*
Ga0062389_1005263012	3300004092	Bog Forest Soil	LTQRDFANLHGVGLSTLSKWLRVESDASPPPVKFQEVTLPNMPLRYAVEVVSPQGWIVRLQNGSDVQQLPALLQALPC*
Ga0062389_1032398902	3300004092	Bog Forest Soil	MTQRDFAVRHGIGMSTLSKWLRVENEATPSPVKFQEVKLCNTPLRYAVEVVSPHGWTVRLQNSSEVESLPQLLQALPC*
Ga0062389_1046425702	3300004092	Bog Forest Soil	GMYSPKSGSVQRRRTPEQRQRLLARFHKSQMTQRDFSVRHGIGMSTLSKWLRVEVKPKQPRVKFQEVMMPNTPLRFAVEVVSPQGWIVRLHDGSDVQSLSSLLQALPC*
Ga0070711_1001705101	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MYSSKTGSVRRRKTSAERQKLLAHFHQSQMTQRDFATRHGVGLSTLSKWLRCEDKITLPPMKFHEVTLPHTPLRYSVELVSPQGWTVRLQNTSDIESLPQLLQALPC*
Ga0070681_102193693	3300005458	Corn Rhizosphere	MVSSKSNQVRRRLTSQQRQRLLARFHESQMTQRDFAIRHGVGLSTLSKWLQREDKTVMPPVKFQEVTLPHTPLRYAVELVSPKGWTVRLQNTSDIELLPQLLQALPC*
Ga0070733_107038863	3300005541	Surface Soil	VGLSTLSKWLRCEDKTSMPPVKFQEVTLPHTPLRYAVELVSPQGWTLRLQNASDIESLPQLLQAPPC*
Ga0070761_102957453	3300005591	Soil	KQRQRFLARFHQSQLTQRDFATRFGVGLSTLSKWLRVENEPTSPPVKFQEVTLPKISQCYAVEVVSPQGWTVRLQHSAEIKTLAEVLQSLPC*
Ga0097691_11757052	3300006055	Arctic Peat Soil	TGAGDFDCLLSLGLSTLSKWLRCEGKAPLPSVKFQEIVLPTMPLGYAVEVVSPQGWIVRLQNSAAVPSLPQLLQALPC*
Ga0070765_1020057771	3300006176	Soil	SQLTQRDFANHHGVGLSTLSKWLRVENEAASPPVKFQEVILPNAPMRYAVEVVSPQGWTVRLQNSSEIETLAQVLQSLPC*
Ga0075522_100012409	3300006638	Arctic Peat Soil	MYSSKSRPGRRRWTVKQRQRLLAGFHESQQRGFASRHGVGLSTLSKWLRVESETISPPVKFQEVTLPKMPPRYAVEVVSPQGWTVRLQSGSDVQQLAALLQALPC*
Ga0073936_106288531	3300009175	Freshwater Lake Hypolimnion	LLARYHKGQLTQRDFATRHGIGLSTFSKWLRCEDKTAIPPVKFHEVTLPHPPLRYAVELVSPQGWTVRLQSSSDIESLHELLQALPC*
Ga0073936_106892982	3300009175	Freshwater Lake Hypolimnion	MNYSKPVSARRRKTAQQRHRLVTRFHHSQLTQRQFAARHGIGLSTLSKWLRRESKQSLPPVKFQEMTLPSVTPRWAVEVVSPQGWVIRLQNSTEVPTLPQLLLAVPC*
Ga0118657_115911522	3300009506	Mangrove Sediment	MNTSKTGFVRQRKTPTERQRLVARFHESQMTQRDFATRHSIGLSTLGKWLRLESTAPSPRVKFKEVVLPNTSLRCAVEVVSPQGWIVRLHNSSETHTLSQVLQALPC*
Ga0116137_11782623	3300009549	Peatland	HQSQLTQRDFATRHGLGLSTLSKWLRVENEAASPPVKFQEVTLPNMPLRYAVEVVSPQGWTVRLQNSSKIETLPQLLQALPC*
Ga0105340_11623232	3300009610	Soil	LLARFQESQLTQRDFAGKHGVGLSTLSKWLRVESEAAPAPMKFQEVTLPKMPPRYQVEVVSPQGWIVRLQNNSEIETLAQLLQALPC*
Ga0116126_11905921	3300009640	Peatland	QSQLTQRDFAGRHGVGLSTLSKWLRVESTAVAPPVKFQEVVLPNPPLRYAVGVVSPQGWTVRLQNGSEIETLPQLLRALPC*
Ga0074046_104449191	3300010339	Bog Forest Soil	EMTQRDFATRYGVGLSTLSKWLRCGDKASLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIESLPQLLQALPC*
Ga0074045_104028192	3300010341	Bog Forest Soil	MTQRDFAVRHGIGMSTLSKWLRVEVTPKLPRVEFQEVVLPNTPLRYAVEVVSPHGWTVRLQNSSEVESLPQVLQ
Ga0074045_105586961	3300010341	Bog Forest Soil	MTQRDFAARHSIGLSTLSKWLRVELKPKAPRVLFQEVVVPNAPPRYAVEVVSPQGWTVRLQNGPEVQTLSQVLQALPC*
Ga0074044_102470653	3300010343	Bog Forest Soil	RRRTPEQRQRVLARFRKSQMTQRDFAVRHGIGMSTLSKWLRVEVKPRLPRVKFQEVVLPNTPLRYAVEVVSPHGWTVRLQNSSEVESLPQVLQALPC*
Ga0074044_104368941	3300010343	Bog Forest Soil	MKSWRHGFIKNGSGRRHWTSKQRQRLLTRFHQNEMTQRDFTTRYGVGLSTLSKWLGCEDKATLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNDSGIETLTQVLQALPC*
Ga0074044_110896871	3300010343	Bog Forest Soil	RHGIGMSTLSKWLRCEDKAASPPMKFQEVVLPNTPLRYVVEVVSPKGWTVRLQNGSDVESLSQLLQALPC*
Ga0136449_1004578663	3300010379	Peatlands Soil	MTQREFATCYGVGLSTLSKWLRCEDKASLPLVRFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQL
Ga0181539_11681973	3300014151	Bog	GRHGVGLSTLNKWLRVESETPSPPLKFQEVTLHNMPMRCAVEVVSPQGWTVRLQNGSEIETLPQLLRALPC*
Ga0181524_101453533	3300014155	Bog	LLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKATLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0181524_104117452	3300014155	Bog	HESQLTQRDFAGRHGVGLSTLNKWLRVESETPSPPLKFQEVTLHNMPMRCAVEVVSPQGWTVRLQNGSEIETLPQLLQALPC*
Ga0181518_104597242	3300014156	Bog	GRRRWTSKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKATLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0181521_102058642	3300014158	Bog	LTRRDFATRHGVGLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMLYAVEVGSTQGGTVRLQNSSEIETLAQLLQALPC*
Ga0181530_102159452	3300014159	Bog	VVAQAHTKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0181529_100392594	3300014161	Bog	MKYSKSGSGRRRLTDKQRQRLLARFHQSQSTQRDFAGRHGVGLSTLSKWLRVESDGPPSPVKFQEVTLPNMPQRYAVEVVSPQGWTVRLQNSSEIETLPQLLQALPC*
Ga0181538_100514603	3300014162	Bog	VVAQAHTKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNIPLRYAVEVVSPQGWTVRLQNTSEIQGLPQLLRALPC*
Ga0182013_101022013	3300014492	Bog	MNSSKTGLVRRRKTSDERQRLVARFHESQMTQRDFAALHGIGLSTLSKWLRVEVKPKPPCVKFQEVVMPNTPLLYAVEVVSPQGWTVRLQNGSDVQMLPSVLRALPC*
Ga0182019_107019392	3300014498	Fen	LVARFRESQLNQRDFATRYGVGLSTLSKWLRIESETSPPSVKFQEVTLPNMPLRYQVEVVSPQGWTVRLQNGSDVQLLPALLRALPC*
Ga0182024_103513513	3300014501	Permafrost	MYSSKSGSGRRRRTVKQRRRLLARFHQSQLTQRDFARRHGVGLSTLSKWLRVENATDSPPVKFQEVTLPNVPLRYAVEMVSPQDWTVRLQNSSEIETLVQLLQALPC*
Ga0182024_103545763	3300014501	Permafrost	GRHGVGLSTLSKWLRVESETPPPPVKFQEVTLPKMPPRYAVEVVSPRGWTVRLQNGSDVQQLPALLQALPC*
Ga0182024_115431832	3300014501	Permafrost	MNFFKSGSGRRRRTAKQRQRLLARFHQSHLTQRDFATRHGVGLSTLSKWLRVEGETASPPMKFQEVVLPNMPPRYAVEVVSPQGWTVRLQNSSEIGALPKLLQALPC*
Ga0182024_119919821	3300014501	Permafrost	MTQRDFATRYGVGLSTLSKWLRVESTAVAPPVKFQEVALPTMPPRYPVEVVSPHGWIVRLQNGDSFQALSELLQALLC*
Ga0182024_124824942	3300014501	Permafrost	TQRDFANRHGVGLSTLSKWLRVESETPAPPVKFQEVRLPNTPSRYAVEVVSPQGWIVRLQNGSDVKSLPELLRALPC*
Ga0182021_112488872	3300014502	Fen	LVARFRESQLNQRDFATRYGVGLSTLSKWLRIESETSPPSVKFQEVTLPNMPLRYQVDVVSPQGWTVRLQNGSDVQQLPALLRALPC*
Ga0182030_100932421	3300014838	Bog	TSKQRQRLLTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC*
Ga0182030_102272543	3300014838	Bog	MYSSKSGSGRRRRTVKQRQRLLARFHQSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEMTLPSMPPRYAVEVVSPQGWTVRLQNSSEIETLAQVLQSLPC*
Ga0182030_116485502	3300014838	Bog	VNSSKTGLVHRRKTSEERQRLLARFHESQMTQRDFAARHGIGMSTLSKWLRVEVKPKPPSVKFQEVVIPHTPLRYAVEVVSPQGWTVRLQNSSEIESLAQVLQALPC*
Ga0182027_118676732	3300014839	Fen	LTRFHQNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLQALPC*
Ga0167644_10321362	3300015206	Glacier Forefield Soil	MISSKNGLVRRRLTPQQRQRVLARFHKDQLTQRDFATRHGIGLSTLSKWLRCEDKTAVPPVKFQEVTLPHTPLRYAVELVSPQGWTIRLQNPSDIESLTQLLQALPC*
Ga0187856_12965242	3300017925	Peatland	ARFHQSQLTQRDFANRHGVGLSTLSKWLRVENEATSPPVKFQEVTLPNMPMRYAVEVVSPHGWTVRLQKSSEIETLAQVLQALPC
Ga0187877_10874702	3300017931	Peatland	LLARFHQRQLTQQDFAGRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187848_100367971	3300017935	Peatland	RHGVGLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMRYAVEVVSPQGWTVRLQNSSEIETLAQLLQALPC
Ga0181520_100318666	3300017988	Bog	MKYSKSGSGRRRLTDKQRQRLLARFHQSQSTQRDFAGRHGVGLSTLSKWLRVESDGPPSPVKFQEVTLPNMPQRYAVEVVSPQGWTVRLQNSSEIETLPQLLQALPC
Ga0187868_10980713	3300018002	Peatland	VKQRQQLLARFHQSQLTQRDFANRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187880_10898873	3300018016	Peatland	RLHQSQLTQRDFAGRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187880_11369423	3300018016	Peatland	GLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMRYAVEVVSPQGWTVRLQNSSEIETLAQLLQALPC
Ga0187889_101762573	3300018023	Peatland	TQRDFAGRHGVGLSTLSKWLRVESDAPAPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187881_102134123	3300018024	Peatland	LSTLSKWLRVRGHAVPPPVKFQEVMLANTPPRYAVEVVSPQGWIVRLQNSSEVETLPQVLQALPC
Ga0187885_102826182	3300018025	Peatland	VTRFHQSQLTQRDFAARHGIGLSTLGKWLRCESKTTLPSVKFQEVGLPNAAPRWAVEVVSPQGWIVRLHNSSELQTLLQLLRALPC
Ga0187867_102832891	3300018033	Peatland	QLTQRDFATRHGGGLSTLSKWLRVGNEAGSPPMKFQEVILPNTPMRYAVEVVSPQGWTVRLQNSSEIETLAQLLQALPC
Ga0187867_108245411	3300018033	Peatland	MYSSKSGSERRRWTAKQRQRLLTRFHESQLTRRDSATRHGVGLSTQSKWLRVESEAASPPVKFQEVTLPNTPLRYAVKVISPQGWTIRLPNSSETEALPELLRALPC
Ga0193726_10225844	3300020021	Soil	MISSDSSSVRRRLTPQQRQRLLARFHKGHLTQRDFASRHGVGLSTLSKWLRCEDKRAMPPVKFQEVTLPHTPLRYAVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0214192_10034667	3300021142	Freshwater	MISSKNRSVSRRLTPQQRQRLLARFRKGQLTQRDFASRHGVGLSTLSKWLRCEGTTALPPVKFQEVTLPHTPLRCAVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0212088_100412846	3300022555	Freshwater Lake Hypolimnion	MNYSKPVSARRRKTAQQRHRLVTRFHHSQLTQRQFAARHGIGLSTLSKWLRRESKQSLPPVKFQEMTLPSVTPRWAVEVVSPQGWVIRLQNSTEVPTLPQLLLAVPC
Ga0212088_101135583	3300022555	Freshwater Lake Hypolimnion	MNSSKPVSVRRRKTTQQRHRLVTRFHHSQLTQRQFATRHGIGLSTLSKWLRHESKQSSPPVKFQEVALPSVTSRWAVEVVSPQGWVIRLQNGSEVQALPQLLRAVPC
Ga0212088_108557071	3300022555	Freshwater Lake Hypolimnion	MISSKSRSVRRRLTPQQRQRLLARYHKGQLTQRDFATRHGIGLSTFSKWLRCEDKTAIPPVKFHEVTLPHPPLRYAVELVSPQGWTVRLQSSSDIESLHELLQALPC
Ga0224552_10469341	3300022850	Soil	RRRRTVKQRQRLLARFHKSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEVTLPSMPPRYAVEVVSPQGWTVRLQNSSEIEALAQVLQSLPC
Ga0209483_100267610	3300025862	Arctic Peat Soil	MYSSKSRPGRRRWTVKQRQRLLAGFHESQQRGFASRHGVGLSTLSKWLRVESETISPPVKFQEVTLPKMPPRYAVEVVSPQGWTVRLQSGSDVQQLAALLQALPC
Ga0207707_104066642	3300025912	Corn Rhizosphere	MVSSKSNQVRRRLTSQQRQRLLARFHESQMTQRDFAIRHGVGLSTLSKWLQREDKTVMPPVKFQEVTLPHTPLRYAVELVSPKGWTVRLQNTSDIELLPQLLQALPC
Ga0207663_102878343	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SAERQKLLAHFHQSQMTQRDFATRHGVGLSTLSKWLRCEDKITLPPMKFHEVTLPHTPLRYSVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0210067_10266233	3300025947	Natural And Restored Wetlands	RAFAGRHGIGLSTLGKWLRAEGQATLPPVKFREVVLPNTPLRYAVEVVSPQGWIVRLQNSSEVQTLPQLLQALPC
Ga0209038_100127111	3300027737	Bog Forest Soil	MISSKSSLVRRRLTPLQRQRLVVRFHKGQLTQRDFAARHGVGLSTLSKWLRVESETASPPVKFREVTLPNTPLRYAVEVVSPKGWTVRLQNSSDVVSMPQLLQALPC
Ga0209772_102062642	3300027768	Bog Forest Soil	TLSKWLRVENETPSPPVNFQEVILPNTPMRYAVEVVSPQGWTVRLQNSAEIHNLPQLLQALPC
Ga0209910_100052252	3300027803	Thawing Permafrost	MYSSKSGSGRRRRTVKQRQRLLARFHQSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEMTLPSMPPRYAVEVVSPQGWTVRLQNSSEIETLAQVLQSLPC
Ga0209274_102133381	3300027853	Soil	WTAKQRQRFLALFHQSQLTQRDFASRHGVGLSTLSKWLRVESEAVSPSVKFQEMTLPSMPPRYALEVVSPQGWTVRLQNSSEIETLAQVLQALPC
Ga0209517_1001726411	3300027854	Peatlands Soil	MTQRDFATRYGVGLSTLSKWSRCEDKATLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLQALPC
Ga0209517_102690132	3300027854	Peatlands Soil	MNSSKSGSGHRRWTAKQRQRLLARFRQSEMTQRDFATRYSVGLSTSSKWLRVESTAAAPPVKFQEVVLPNALLHYPVEVVSPHGWIVRLQNDTAVQALSELLQALPC
Ga0209777_100545014	3300027896	Freshwater Lake Sediment	RHGIGLSTLSKWLRVESEAPSPPVKFQEVTLPNIPLRYAVEVVSPQGWTVRLQNGSDVQRLPALLQALPC
Ga0209777_101046211	3300027896	Freshwater Lake Sediment	MDYSKTGSGRRRWTSKQRQRLLTRFHHNEMTQRDFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWIVRLQNSSDVQMLPALLRALPC
Ga0265334_100045542	3300028573	Rhizosphere	MVSSKSNQVRRRLTSQQRQRLLARFHESQMTQRDFATRHGVGLSTLSKWLRCEDKTAMPPVKFHEVTLPHTPLRYAMELVSPKGWTVRLQNSSDVESLTQLLQALPC
Ga0265334_101517862	3300028573	Rhizosphere	MISSKSRSVRRRLTLQQRQRLLARFHKGQLTQRDFASRQGVGLSTLSKWLRWEDKTTLPPMKFQEVTLPHTPLRYSVELVSPQGWTVRLQNASDIESLPQLLQALPC
Ga0265318_101532941	3300028577	Rhizosphere	RDFATRHGVGLSTLSKWLRCEDKTAMPPVKFHEVTLPHTPLRYAMELVSPKGWTVRLQNSSDVESLTQLLQALPC
Ga0265338_101394923	3300028800	Rhizosphere	LSKWLRCEDKTTIPLMQFQEVSLPHTPLRYSVELVSPQGWTVRLHNASHIDFLPQLLQALPC
Ga0265338_101993373	3300028800	Rhizosphere	MTQRDFAVRHGIGMSTLSKWLGCGDKADLAPVKFREVVLPNTPLRFTVEVVSPQGWIVRLQNGSDVQMLPD
Ga0311340_114588832	3300029943	Palsa	MNYSKSGSGRRRWTSKQRQRLLARFHKSQLTQRDFAGLHGIGLSTLSKWLRVESETPSPPVKFQEVTLPNMPPRYPVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0311346_112173741	3300029952	Bog	QSQLTQRDFAGRHGVGLSTLSKWLRVESEAAPPPVKFQEVTLPNMPPRYTVEVVSPQGWTVRLHNSSEIETLPKVLQALPC
Ga0311353_106609302	3300030399	Palsa	MISSKNGLVRRRLTPQQRKRLLVRFDKGQLTQRDFATRHGIGLSTLSKWLRCEDKTVMPPVKFQEVTLPHTPLRYSVEVVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0311370_102260033	3300030503	Palsa	GLSTLSKWLRVEGEAASPPVKFQEVVLPNMSPRYAVEVVSPQGWTVRLQNSSEIEALPHLLQALPC
Ga0311370_124460381	3300030503	Palsa	MTQRDFAVRHSIGLSTLSKWLRVEAKSKPPSVKFQKVVMPNAPLRFAMDVVSPKGWTVRLQNGSDVESLPQLLQALPC
Ga0311372_120429382	3300030520	Palsa	SQLTQGDFANRHGIGLSTLSKWLRVASETPVPAVKFQELTLPQMPQRFPVEVVSPQGWTVRLQNGSEIETLSQLLQALPC
Ga0265753_10097742	3300030862	Soil	LTQRDFASRHGVGLSTLSKWLRDESETTSPPLKFQEVILPDTAVRYVVEVVSPQGWTVRLQNTSEIETLAQLLQALPC
Ga0302325_105688213	3300031234	Palsa	LARFHESQLTQRDFAGRHGVGLSTLSKWLRVESEAASPPVKFQEVTLPNMRQRYAVEVVSPQGWTVRLQNGSG
Ga0302325_108660851	3300031234	Palsa	MTQRDFAVHHGIGMSTLSKWLRAEVKPKPPRVKFQEVVLPNTPLRYAVEVVSPHGWTVRLQSSSEVQTLSQVLQALPC
Ga0302325_131750022	3300031234	Palsa	KQRQRLLARFHKSQLTQRDFAGLHGIGLSTLSKWLRVESETPSPPVKFQEVTLPNMPPRYPVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0265325_104697251	3300031241	Rhizosphere	NRHGVGLSTLSKWLRVESEAAPPPVKFQEVTLANMPLRHAVEVVSPQGWIVRLQNGSEIETLAQVLQALPC
Ga0302140_111470571	3300031261	Bog	RLLARFHESPLTQRDFATRHGVGLSTLSKWLRVESEAAPAPMKFQEVTLPKLPPRYPVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0302320_109950691	3300031524	Bog	MISSKNGLVRRRLTPQQRQRLLARFHKDQLTQRDFSNRHGIGLSTLSKWLRCEDKTTLPPVKFREVTLPHTPLRYAVELVSPQGWTVRLQNTSDIESLPQLLQALPC
Ga0302320_113652532	3300031524	Bog	MYSSKSGSGRRRRTVKQRQRLLARFHKSQLTQRDFASRHGVGLSTLSKWLRVESETTLPPVKFQEVTLPSMPPRYAVEVVSPQGWTVRLQNSSEIEALAQVLQSLPC
Ga0302320_117239602	3300031524	Bog	MISSKSGSVRRRLTSQQRQLLLARFRKGQLTQRDFASRHGVGLSTLSKWLRCEDKTTMPPVKFQEVTLPHTPLRYPVELVSPQGWTVRLQNASDIESL
Ga0302326_133629511	3300031525	Palsa	MTQRDFATRYGVGLSTLSKWLRVESKAAEPPVQFQEVVVPNMPMRYAVEVVSPQGWTVRLQNGSDVQELPALLRAL
Ga0310686_1002815611	3300031708	Soil	MYSSKSGSGRRRRTVKQRRRLLARFHQSQLTQRDFARRHGVGLSTMSKWLRVENATDSPPVKFQEVTLPNVPLRYAVEMVSPQDWTVRLQNSSEIETLVQLLQALPC
Ga0310686_1129862372	3300031708	Soil	QRDFANRHGVGLYTLSKWLRVESETPSPPVKFQEVTLPNMPLRYAVEVVSPQGWTVRLQNGSDVQQLPALLQALPC
Ga0310686_1157888002	3300031708	Soil	MNSSKTGLVRRRKTSEERQRLLARFHESQMTQRDFAARHGIGMSTLSKWLRVEVKPKPPRVKFQEVVMPNTPLRYAVEVVSPQGWTVRLQNGSDVLILPSVLRTLPC
Ga0265314_105955392	3300031711	Rhizosphere	HKGQLTQRDFASRQGVGLSTLSKWLRWEDKTTLPPMKFQEVTLPHTPLRYSVELVSPQGWTVRLQNASDIESLPQLLQALPC
Ga0302321_1019928762	3300031726	Fen	MKFSESGLVRRRKTPAERQRLVARFRESQMTQREFAARHGMGLSTLGKWLRGAGQSNPSPVNFQEVVLPNTALRYAVEVVNPQGWIVRLQDASAVEPLPTLLRALPC
Ga0315277_1000248921	3300032118	Sediment	MNVSKNGQVRRRKTFEQRQRLLARFHQSQLTQRDFAARHGIGLSTLGKWLPVESTATLPPVNFNEVVLPHTPRRYAVEVVSPQGWIVQLQVGSEVQMLPQLLQALRC
Ga0311301_105705001	3300032160	Peatlands Soil	KSGSGRRRWTAKQRQRLLARFRQSEMTQRDFATRYSVGLSTSSKWLRVESTAAAPPVKFQEVVLPNALLHYPVEVVSPHGWIVRLQNDTAVQALSELLQALPC
Ga0315271_117840822	3300032256	Sediment	MDSFKTGSGRRRWTSKERHQLLARFHQSQLTQRAFAARHGIGLSTLGKWLRVQAQATLPLVKFQEVVLPNTPLRYAVEVVSPQGWIVRLQHSSEVQTLPPLLQALPC
Ga0335079_119776212	3300032783	Soil	DFATRYGVGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC
Ga0335077_110564591	3300033158	Soil	VGLSTLSKWLRCEDKVTLPPVKFKEVVLPNMPLRYAVEVVSPQGWTVRLQNTSEIQSLPQLLRALPC
Ga0326726_106133063	3300033433	Peat Soil	NGLVRRRRTSKQRRRLLACFHESQLTQQDFAARHGIGLSTLGKWLRVESKATLPPVEFEEVILPNTQLRYAVEVVSSRGWIVRLQNSSEVHTLPQLLQALPC
Ga0316624_121579081	3300033486	Soil	RDFAARHGIGLSTLGKWLRLESTAPSPPVKFTEVVLPNTSLRYPVEVISPQGWVVRLQNGSELHTLSEVLQALPC
Ga0370483_0118712_365_688	3300034124	Untreated Peat Soil	MYSPKSGSVRRRRTPEQRQRVLARFRKSQMTQRDFAVRHGIGMSTLSKWLRVESEAAPSPVKFQEVKLPNMPLRYAIEVVSPQGWTVRLQNGADVESLPQLLQALPC

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences