Metagenome Family F081527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081527
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	55 residues
Representative Sequence	MIKITTTALVAVAMLTASSAFAGDKACCAKGASKADAMACVNLATLNLTPDQKTK
Number of Associated Samples	101
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.49 %
% of genes near scaffold ends (potentially truncated)	98.25 %
% of genes from short scaffolds (< 2000 bps)	92.98 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.789 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.579 % of family members)
Environment Ontology (ENVO)	Unclassified (52.632 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.404 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.51% β-sheet: 0.00% Coil/Unstructured: 73.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00291	PALP	63.16
PF13414	TPR_11	7.89
PF13432	TPR_16	7.02
PF14559	TPR_19	2.63
PF00534	Glycos_transf_1	1.75
PF13439	Glyco_transf_4	1.75
PF00578	AhpC-TSA	1.75
PF10417	1-cysPrx_C	1.75
PF06167	Peptidase_M90	0.88
PF13424	TPR_12	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3228	Mlc titration factor MtfA, regulates ptsG expression	Signal transduction mechanisms [T]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.79 %
Unclassified	root	N/A	34.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.79 %
Unclassified	root	N/A	34.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.79 %
Unclassified	root	N/A	34.21 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	35.09 %
Unclassified	root	N/A	34.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.77 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	35.09 %
Unclassified	root	N/A	34.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	25.44 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	5.26 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.44 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	5.26 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.44 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	4.39 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.88 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	4.39 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.88 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.21 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	4.39 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	0.88 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000044\|ARSoilOldRDRAFT_c028441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100489394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300000550\|F24TB_10176198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300001431\|F14TB_101236216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300004479\|Ga0062595_102284833	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005167\|Ga0066672_10527984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300005171\|Ga0066677_10161949	Not Available	1232	Open in IMG/M
3300005172\|Ga0066683_10259416	Not Available	1078	Open in IMG/M
3300005174\|Ga0066680_10279405	Not Available	1064	Open in IMG/M
3300005179\|Ga0066684_10530512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300005181\|Ga0066678_11084596	Not Available	516	Open in IMG/M
3300005186\|Ga0066676_10166961	Not Available	1394	Open in IMG/M
3300005187\|Ga0066675_10549136	Not Available	866	Open in IMG/M
3300005353\|Ga0070669_101112513	Not Available	680	Open in IMG/M
3300005367\|Ga0070667_101186157	Not Available	714	Open in IMG/M
3300005436\|Ga0070713_101266438	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005444\|Ga0070694_100885476	Not Available	736	Open in IMG/M
3300005446\|Ga0066686_10309247	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005451\|Ga0066681_10219011	Not Available	1144	Open in IMG/M
3300005458\|Ga0070681_11467467	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005467\|Ga0070706_101141728	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005540\|Ga0066697_10197640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1195	Open in IMG/M
3300005552\|Ga0066701_10047373	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300005555\|Ga0066692_10041389	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300005556\|Ga0066707_10877317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300005569\|Ga0066705_10107439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1667	Open in IMG/M
3300005569\|Ga0066705_10880150	Not Available	532	Open in IMG/M
3300005587\|Ga0066654_10011431	All Organisms → cellular organisms → Bacteria → Proteobacteria	3337	Open in IMG/M
3300005598\|Ga0066706_11127011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005764\|Ga0066903_103538824	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300006028\|Ga0070717_11088356	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006034\|Ga0066656_10362248	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300006195\|Ga0075366_10691286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	633	Open in IMG/M
3300006794\|Ga0066658_10314270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	837	Open in IMG/M
3300006800\|Ga0066660_10387422	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300006854\|Ga0075425_102636435	Not Available	555	Open in IMG/M
3300006871\|Ga0075434_102556272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300009012\|Ga0066710_103332704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300009012\|Ga0066710_103607953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300009089\|Ga0099828_11729931	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009137\|Ga0066709_100252780	All Organisms → cellular organisms → Bacteria → Proteobacteria	2361	Open in IMG/M
3300009137\|Ga0066709_102204118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300010303\|Ga0134082_10044649	All Organisms → cellular organisms → Bacteria → Proteobacteria	1692	Open in IMG/M
3300010304\|Ga0134088_10014812	All Organisms → cellular organisms → Bacteria → Proteobacteria	3381	Open in IMG/M
3300010304\|Ga0134088_10502749	Not Available	597	Open in IMG/M
3300010321\|Ga0134067_10042072	Not Available	1449	Open in IMG/M
3300010321\|Ga0134067_10307718	Not Available	613	Open in IMG/M
3300010322\|Ga0134084_10399095	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300010322\|Ga0134084_10443431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300010325\|Ga0134064_10072655	Not Available	1091	Open in IMG/M
3300010333\|Ga0134080_10709787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300010335\|Ga0134063_10512948	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300011003\|Ga0138514_100036737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	949	Open in IMG/M
3300012199\|Ga0137383_10203895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1449	Open in IMG/M
3300012201\|Ga0137365_10848133	Not Available	667	Open in IMG/M
3300012201\|Ga0137365_11234029	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012202\|Ga0137363_11296906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300012205\|Ga0137362_10319987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1343	Open in IMG/M
3300012209\|Ga0137379_11016290	Not Available	734	Open in IMG/M
3300012285\|Ga0137370_10435262	Not Available	797	Open in IMG/M
3300012349\|Ga0137387_10648357	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012356\|Ga0137371_10464518	Not Available	979	Open in IMG/M
3300012948\|Ga0126375_11418294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	590	Open in IMG/M
3300012975\|Ga0134110_10320687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300012976\|Ga0134076_10194513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	848	Open in IMG/M
3300013296\|Ga0157374_10882659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	912	Open in IMG/M
3300014157\|Ga0134078_10246438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300014157\|Ga0134078_10318437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300014166\|Ga0134079_10072596	Not Available	1260	Open in IMG/M
3300014166\|Ga0134079_10213972	Not Available	815	Open in IMG/M
3300015357\|Ga0134072_10015764	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300015359\|Ga0134085_10205473	Not Available	849	Open in IMG/M
3300018027\|Ga0184605_10038979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1989	Open in IMG/M
3300018052\|Ga0184638_1228756	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300018071\|Ga0184618_10064364	Not Available	1367	Open in IMG/M
3300018431\|Ga0066655_10320297	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300018433\|Ga0066667_10924061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300019875\|Ga0193701_1032797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1065	Open in IMG/M
3300019878\|Ga0193715_1008236	All Organisms → cellular organisms → Bacteria → Proteobacteria	2230	Open in IMG/M
3300019881\|Ga0193707_1161737	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300019882\|Ga0193713_1109600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300019997\|Ga0193711_1021376	Not Available	820	Open in IMG/M
3300019999\|Ga0193718_1098073	Not Available	604	Open in IMG/M
3300020018\|Ga0193721_1060217	Not Available	994	Open in IMG/M
3300020170\|Ga0179594_10311433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300022694\|Ga0222623_10053573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1553	Open in IMG/M
3300022756\|Ga0222622_10069505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2067	Open in IMG/M
3300025912\|Ga0207707_11250395	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025928\|Ga0207700_10465229	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300026310\|Ga0209239_1357981	Not Available	511	Open in IMG/M
3300026314\|Ga0209268_1148927	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026324\|Ga0209470_1285089	Not Available	626	Open in IMG/M
3300026326\|Ga0209801_1047837	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300026327\|Ga0209266_1213546	Not Available	678	Open in IMG/M
3300026327\|Ga0209266_1224378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300026330\|Ga0209473_1102487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1195	Open in IMG/M
3300026333\|Ga0209158_1063400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1473	Open in IMG/M
3300026523\|Ga0209808_1125525	Not Available	1044	Open in IMG/M
3300026528\|Ga0209378_1108970	Not Available	1210	Open in IMG/M
3300026532\|Ga0209160_1232004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300026536\|Ga0209058_1313926	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300026538\|Ga0209056_10722094	Not Available	505	Open in IMG/M
3300026547\|Ga0209156_10211669	Not Available	920	Open in IMG/M
3300026547\|Ga0209156_10288258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300026548\|Ga0209161_10165534	Not Available	1264	Open in IMG/M
3300028814\|Ga0307302_10306297	Not Available	781	Open in IMG/M
3300031474\|Ga0170818_100754278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300031474\|Ga0170818_106364334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300031573\|Ga0310915_10210637	Not Available	1361	Open in IMG/M
3300031820\|Ga0307473_10644910	Not Available	737	Open in IMG/M
3300031890\|Ga0306925_11520857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300032180\|Ga0307471_102555187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300033412\|Ga0310810_11291916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.86%
Host-Associated	Host-Associated	6.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.47%
Plants	Host-Associated → Plants	6.14%
Aquatic	Environmental → Aquatic	4.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	4.39%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.88%
Roots	Host-Associated → Plants → Roots	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.07%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.88%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.88%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.88%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilOldRDRAFT_0284411	3300000044	Arabidopsis Rhizosphere	MIKITTTALVAVAMLTASSAFAGDKACCAKGVSKADSMACVNLATL
INPhiseqgaiiFebDRAFT_1004893942	3300000364	Soil	MIKITSTALVAVAMLAASSAFAGDKACCAKGASNTGSMTCLNLATLNLTPDQKAKI
F24TB_101761982	3300000550	Soil	MIKITTTALVAVAMLTASSAFAGDKACCANGVSKANSMACVNLATLNLTPDQKTKIETWQAECMK
F14TB_1012362161	3300001431	Soil	MIKITTTALVAVAMLTASSAFAGDKACCANGVSKANSMACVNLATLNLT
Ga0062595_1022848332	3300004479	Soil	MNKIITTFLVAAVMLAASSAFAGDKACCAKGAANAHSMACVNL
Ga0066672_105279841	3300005167	Soil	MRVSAFTMIKITVSTLVAVAMLIASSAFAGDKACCAKGVSNTEKTACADLAALNLTPDQQSKIEAWQ
Ga0066677_101619491	3300005171	Soil	MIKITTTALVAVAMLTASSAFAGDKACCAKGASKADAMACVNLAT
Ga0066683_102594162	3300005172	Soil	MIKITITALVATAMLIASSVFAGDKACCVKGVSNTDKTACVDLATLNLTPEQKAKIEAWQ
Ga0066680_102794052	3300005174	Soil	MIKITTTALVAAAMLMASSAFAGDKACCVKGVSNTDKTAC
Ga0066684_105305121	3300005179	Soil	MRVSAFTMIKITVSTLVAAAMLVASSAFAGDKACCVKGVSNTEKTACADLTALNLTPDQKTKIEAWQ
Ga0066678_110845962	3300005181	Soil	MIKITTTALVAAAMLMASSAFAGDKACCGASKANSMACLNLATLKLTSDQKTKIE
Ga0066676_101669611	3300005186	Soil	MIKITTTALVAAAMLIASSAFAGDKACCANGAAKSNSMACVNLATL
Ga0066675_105491362	3300005187	Soil	MRVSAFIMIKITVSALVAAAMLVASSAFAGDKACCVKGVSNTEKTACADLAALNLTPDQKTKIEAWQAEC
Ga0070669_1011125131	3300005353	Switchgrass Rhizosphere	MIKITTTALVAAAMLIASNAFAGDKACCAGGVSHTGKTACADLATL
Ga0070667_1011861571	3300005367	Switchgrass Rhizosphere	MIKITTTALVAAAMLIASNAFAGDKACCAGGVSHTGKTACADLATLILTPDQKAKIE
Ga0070713_1012664381	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIKITTIALVAVAMLTASSAFAGDKACCARGASNKSSMSCANLATLNLTPDQKAKIEAWQ
Ga0070694_1008854762	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIKITTTALVAVAMLTASSAFAGDKACCATGVSKANSMACVNLATLNLTPDQ
Ga0066686_103092471	3300005446	Soil	MMKITTTVLVVAAVLTASSAFAGEHACCAKGASNRSSVACVNLA
Ga0066681_102190111	3300005451	Soil	MIKITTAALVAAAMFISSSAFAGDKACCAKGVSNTEKAACLDLATLNLTPDQKAKIE
Ga0070681_114674672	3300005458	Corn Rhizosphere	VHRGYLSIHMNKIITTVLVAGAMLAASSAFAGDKACCAKGAANAHSMACVNL
Ga0070706_1011417282	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSKIITTAFVAAAMLTASSAFAGDHACCAKGAANAHSMECINLASLNLAPDQKT
Ga0066697_101976403	3300005540	Soil	MIKITTAALVAVAMFISSSAFAGDKACCAKGVSNTEKAACLDLATLNLTPDQKAKIET
Ga0066701_100473734	3300005552	Soil	MIKITTTALIAVAMLAASSAFAGDKACCAKGASNNASMSCVNLATLNLT
Ga0066692_100413893	3300005555	Soil	MIKITTIALLAVGMLMASSAFAGDKACCAKGAANAGVACVNLAT
Ga0066707_108773171	3300005556	Soil	MIKITTTALLAVGMLMASSAFAGDKACCSRGAANAGVACVNLATLNLTADQKTKIETWQ
Ga0066705_101074391	3300005569	Soil	MIKITTTALVAAAMLVASSAFAGDKACCAKGASNTGSVACVDLATLNLTSDQKAKIEAWQADC
Ga0066705_108801501	3300005569	Soil	MIKITTIALVAVAVLTASSAFAGGKACCAKDASNKSSMSCVNLATLN
Ga0066654_100114315	3300005587	Soil	MIKITTTALVAAAMFLASSAFAGDKACCAKGASNTGSVACVDLATLNLTSDQKAKIEAWQADC
Ga0066706_111270112	3300005598	Soil	MIKITTTALVAAAMLIASSAFAGDKACCANGAAKSNSMACVKLATLNLTPDQKTKIEAWQAE
Ga0066903_1035388241	3300005764	Tropical Forest Soil	MIKITTIALVAVAVLTASSAFAGGKACCAKDASNKSSMSCVNLATLNLTPDQKA
Ga0066903_1041499411	3300005764	Tropical Forest Soil	MIKIATTALVAAAMLAASSAFAGDHAYCAKGTANWRSMAVR*
Ga0070717_110883561	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIRITTTALVAAALLTASSAFAGDKACCANGASKSMACVNLATLNLTSDQKTKIQAWQAE
Ga0066656_103622482	3300006034	Soil	MIKITTTVLVMAAMLMASSSFAGEHACCAKGASNKGSMA
Ga0075366_106912861	3300006195	Populus Endosphere	MIRITTTALVAIAMLMAFNAFGGDHACCAKGASKADAAACVNLATLNLTADQTTKIEAWQADCMKSG
Ga0066658_103142702	3300006794	Soil	MIKITVSGLVAAAMLVASSAFAGDKACCTKGVSNTEKTACADLATLNLTPDQKSKIEAWQ
Ga0066660_103874221	3300006800	Soil	MIKITTTALVMAGMLMASSAFAGEHACCAKGASNSGSMACVHLATLNLTPDQKAKIEAWQAECMK
Ga0075425_1026364351	3300006854	Populus Rhizosphere	MIKITTTAVVMAATMLTSSSAFAGDKACCARGTANAGSTACVNLATLNLTPDQKAKIEAW
Ga0075434_1025562721	3300006871	Populus Rhizosphere	MIKITTTALVAAAMLTASAAFAGDKANCASHSNSMACVNLATLNLTPDQKSKIEAWQAECMK
Ga0066710_1033327042	3300009012	Grasslands Soil	MIKITTTALVAVAMLMASNAFAGDKACCAKGVSKADSMACVNLATLNLTPDQKTKIDGWQ
Ga0066710_1036079532	3300009012	Grasslands Soil	MIKITTTALVAVAMLMASSAFAGDKACCAKGVSKADSMACVNLATLNLTPDQKTKIDGWQ
Ga0099828_117299312	3300009089	Vadose Zone Soil	MIKITTTALVMAGMLMASSAFAGDKACCAKGASNTGSLACVNLATLNLTPDQKAKIEAWQAE
Ga0066709_1002527804	3300009137	Grasslands Soil	MIKITTTALVAIAMLTASSAFAGDKACCARGAANAGSMACVNLATLNLT
Ga0066709_1022041182	3300009137	Grasslands Soil	MIKITVSVLVAAAMLVASSAFAGDKTCCVKGVSNTEKTACADLAALNLTPDQKTKIEAWQAE
Ga0134082_100446491	3300010303	Grasslands Soil	MIKITVSVLVAAAMLVASSAFAGDKTCCVKGVSNTEKTACADLAALNLTPDQKTKIEA
Ga0134088_100148125	3300010304	Grasslands Soil	MIKITTTTLVAVAMLMASSAFGGDKACCANGASNASSARVNFATLNLTADQKAKIETWQS
Ga0134088_105027491	3300010304	Grasslands Soil	MIKITITALVATAMFIASSAFAGDKACCVKGVSNTDKTACVDLATLNLTP
Ga0134067_100420721	3300010321	Grasslands Soil	MIKITVSTLVAAAMLVASSAFTGDKACCVKGVSNTEKTACADLTALNLTPDQKTKIEAW
Ga0134067_103077181	3300010321	Grasslands Soil	MIKITVSVLVAAAMLVASSAFAGDKTCCVKGVSNTEKTACADLAALNLTPDQKTKIEAWQ
Ga0134084_103990952	3300010322	Grasslands Soil	MIKITVSALVAAAMLLASNAFAGDKACCAKGVSNTEKTACADLAALNLTPDQKTKIEAWQ
Ga0134084_104434312	3300010322	Grasslands Soil	MIKITVSALVAAAMLIASSAFAGDKDKACCAKGVSNTEKTACVDLATLNLTPDQKTKIEA
Ga0134064_100726552	3300010325	Grasslands Soil	MIKFTTTALVAAAMLVASSAFAGDRACCVKGVSNTDKTACVDLTTLNLTPDQKAKIEAWQ
Ga0134080_107097872	3300010333	Grasslands Soil	MIKITSIVLVAAATLIASSAFAGDKACCAKGVSHTDKTACADLAVLNLTPDQKAKIEAWQADCMKA
Ga0134063_105129482	3300010335	Grasslands Soil	MIKITVSTLVAAAMLVASSAFAGDKACCVKGVSNTEKTACADLTALNLTPDQKTKIEAWQAECMK
Ga0138514_1000367372	3300011003	Soil	MIKITTTTLVAAAMLTASSAFAGDKACCANGVSKANSMACVNLATLNLTPDQKTKIEAWQAE
Ga0137383_102038951	3300012199	Vadose Zone Soil	MIKITTTALLAVGMLMASSAFAGDKACCAKGAANAGVACVNLATLNLTADQKTKIEAW
Ga0137365_108481332	3300012201	Vadose Zone Soil	MIKITGTALVAAAVIIASSAFAGDKACCVKGVSNTEKTACADLTALNLTPDQKTKIEAWQAECV
Ga0137365_112340291	3300012201	Vadose Zone Soil	MIKITVSTLVAAAMLIASSAFAGDKACCAKGVSNTEKTACADLAALNLTPDQKTKI
Ga0137363_112969061	3300012202	Vadose Zone Soil	MIRITTTALVAIAMLTVSTAFAGDKACRAKGASKANSMACVNLATLNLTP
Ga0137362_103199873	3300012205	Vadose Zone Soil	MIKITTTALLAVGMLMASSAFAGDKACCAKGTANAGVACVN
Ga0137379_110162902	3300012209	Vadose Zone Soil	MIKITISALVAAAMLISSSAFAGDKACCVKGVSNTEKAACVDLTTLNLTPDQQSK
Ga0137370_104352622	3300012285	Vadose Zone Soil	MIKINTPALVAIAMLTASSAFAGDKASCANGASKANSMACVNLATLNLTPDQKTKIE
Ga0137387_106483571	3300012349	Vadose Zone Soil	MKITTTAFVVAAMLTASSAFAGDKACCAKGASNKGSMSCVSLATLNLTADQKAKIDAW
Ga0137371_104645182	3300012356	Vadose Zone Soil	MRVSAFTMIKITVSTLVAAAMLVASSAFAGDKACCAKGVSNTEKTACADLAALNLTPDQK
Ga0126375_114182942	3300012948	Tropical Forest Soil	MSKIIITALVAAAMLTTSSAFAGDKACCAKSAANTGVACVNLATLNLTPDQKAKIETWQAECM
Ga0134110_103206871	3300012975	Grasslands Soil	MIKITTTALVAVAMLTASSAFAGDKACCAKGASKADAMACVNLATLNLTPDQKTKIETWQAECVKAG
Ga0134076_101945132	3300012976	Grasslands Soil	MIKIATTLVAVAMLIASSAFGGDKACCANGASNASSTCVNFATLNLTADQKAKIETWQSECM
Ga0157374_108826591	3300013296	Miscanthus Rhizosphere	MIKITTTALFAVAMLTASSVFAGDKACCAKGVSKADAMACVNLA
Ga0134078_102464381	3300014157	Grasslands Soil	MIKITTTALVAVAMLTASSAFAGDKACCAKGASKADAMACVNLATLNLTPDQKTK
Ga0134078_103184371	3300014157	Grasslands Soil	MIKITTTALIAVALFTASSAFAGDKACCGASKSNSMACVNLATLKLTSDQKTKIVAWQAE
Ga0134079_100725961	3300014166	Grasslands Soil	MIKITVSTLVAAAMLVASGAFAGDKACCVKGVSNTEKTACADLTALNLTPDQKTKIEAWQAEC
Ga0134079_102139721	3300014166	Grasslands Soil	MIKITGTALVAAAMLLASSAFAGDKACCAKGVSNTEKTACADLAALNLTPDQKTKIEAWQ
Ga0134072_100157641	3300015357	Grasslands Soil	MIKFTTTALVAAAMLVASSAFAGDRACCVKGVSNTDKTACVDLTTLNLTPDQKAKIEAWQAECVK
Ga0134085_102054732	3300015359	Grasslands Soil	MIKITITALVATAMLIASSVFAGDKACCVKGVSNTDKTACVDLATLNLTPDQKEKIEAWQAECVK
Ga0184605_100389791	3300018027	Groundwater Sediment	MIKITTTALVAVAMLTASSAFAGDKACCAKGVSKAD
Ga0184638_12287561	3300018052	Groundwater Sediment	MIKTVTTLVAAAMLAALSAFAGDHACCAKGAVNAHSMEC
Ga0184618_100643641	3300018071	Groundwater Sediment	MIKITVSALVAAAMLISSGAFAGDKACCVKGVSNTEKTACVDLTTLNLTPDQQSKIEAWQAECMK
Ga0066655_103202972	3300018431	Grasslands Soil	MIKITTTALLAVGMLMASTAFAGDKACCAKGAANAGVACVNLATLNLTADQ
Ga0066667_109240612	3300018433	Grasslands Soil	MIKITTTALIAVAMLTASSAFAGDKACCAKGASKADAMACVNLATLNLTPDQKTKIE
Ga0193701_10327971	3300019875	Soil	MIKITTTALVAVAMLTASSAFAGDKACCAKGVSKADAMACVNLATLNLT
Ga0193715_10082364	3300019878	Soil	MIKIIVSGLVAAAMLTASSAFAGDKACCAKGVSNTEKTACVDLATLNLTPDQKSK
Ga0193707_11617372	3300019881	Soil	MIKITTTALVAVAMLMASSAFAGDKACCAKGASKADSMACANLATLNLTPDQKTKIGTWQAECV
Ga0193713_11096002	3300019882	Soil	MIKITVSGLVAAAMLVASSAFAGDKACCAKGVSNTEKTACVDLATLNLTPDQKSK
Ga0193711_10213761	3300019997	Soil	MIKITNIALVAVAMVISSSAFAGDKACCAKGVSHTDRTACADLAALNLTPDQK
Ga0193718_10980731	3300019999	Soil	MIKITTTALVAVAMLMASSAFAGDKACCANGASKANSMACV
Ga0193721_10602171	3300020018	Soil	MIKITTTALVAAAMLVASSAFAGDKACCVKGVSNPDKMACADLTTLNLTPDQ
Ga0179594_103114332	3300020170	Vadose Zone Soil	MIKITVSGLVAAAMLVASSAFAGDKACCVKGVSNTEKAACVDLTTLNLTPDQQSKIEAW
Ga0222623_100535731	3300022694	Groundwater Sediment	MAAATLIASSAFAGDKACCAKGASHTDKTACADLAALNLTPDQKAKIEAWQAEC
Ga0222622_100695051	3300022756	Groundwater Sediment	MIKITTTALVAAAMLIASNAFAGDKACCAGGVSHTGKTACADLATLNLTPDQKAKIE
Ga0207707_112503951	3300025912	Corn Rhizosphere	MNKIITTVLVAGAMLAASSAFAGDKACCAKGAANAHSMACV
Ga0207700_104652293	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIKITTIALVAVAMLTASSAFAGDKACCARGASNKSSMSCANLATLNLTPDQKAKIEAWQADC
Ga0209239_13579811	3300026310	Grasslands Soil	MMKITTTVLVAAAMLTASSAFAGDHACCAKGASNRSSVACVNLASLNLTADQ
Ga0209268_11489271	3300026314	Soil	MIKITTTALLAVGMLMASSAFAGDKACCAKGAANAGVACVNLATLNLT
Ga0209470_12850891	3300026324	Soil	MIKITTTALVAITMLTASSVFAGDKACCAKGVSKADAM
Ga0209801_10478373	3300026326	Soil	MRVSAFTMIKITVSTLVAAAMLVASSAFAGDKACCVKGVSNTEKTACADLTALNLTPDQKTKIEAWQAEC
Ga0209266_12135462	3300026327	Soil	MIKIISTALVAIAMLMASSAFAGDKACCAKGVSKADSMACVNLATLNLTSD
Ga0209266_12243781	3300026327	Soil	MIKITITTLVAIAMLTASSAFAGGKACSAKGATDPRSMACVDLATLNLTPDQKAKIEAWQADCMKA
Ga0209473_11024871	3300026330	Soil	MIKITTTALIAVALFTASSAFAGDKACCGASKSNSMACVNLATLKL
Ga0209158_10634002	3300026333	Soil	MIKITTTALVMAGMLMASSAFAGDKACCAKGASNTGSMACVNLATLNLTPDQKAKIEAWQ
Ga0209808_11255251	3300026523	Soil	MIKITTTALVAAAMLASSAFAGDKACCAKGAANTNSTACVNLATLNLTPDQKGKIEAWQAECM
Ga0209378_11089701	3300026528	Soil	MIKITTTALVAAAMLMASSAFAGDKACCVKGVSNTDKTACVDLTTLNLTPDQKA
Ga0209160_12320041	3300026532	Soil	MIKITTTALVAIAMLTASSAFAGDKACCARGAANAGSMACVNLATLNLTSHQKAKVEAWQAEYMK
Ga0209058_13139261	3300026536	Soil	MIKITTTALLAVGMLMASSAFAGDKACCAKGAANAGVACVN
Ga0209056_107220941	3300026538	Soil	MIKITTAALVAAAMFISSSAFAGDKACCAKGVSNTEKAACLDLATLNLTPDQKAK
Ga0209156_102116692	3300026547	Soil	MIKITVSALVAAAMLLASNAFAGDKACCAKGVSNTEKTACADLATLNLTPDQKSKIE
Ga0209156_102882581	3300026547	Soil	MIKITTTALIAVAMLTASSAFAGDKACCAKGASKADAMACVNLATLNLTPN
Ga0209161_101655342	3300026548	Soil	MIKIITTCVVMAAILTASSAFAGDKACCARGAANAGSMACVNLATLNLTPHQKAK
Ga0307302_103062971	3300028814	Soil	LQARRVSAITMIKITTTALVAVAMLIASSGFAGDKACCAKGVSNTEKTACADLAALNLTPDQKAKIEAWQT
Ga0170818_1007542782	3300031474	Forest Soil	MIKITATALLAVGMLMTSSAFAGDKACCAKGAANASVACVNLATLNLT
Ga0170818_1063643341	3300031474	Forest Soil	MIKITVSALVAAAMLVASSAFAGDKACCAKGVSNTEKSACVDLTTLNLTPDQKSKIEAWQAECMK
Ga0310915_102106373	3300031573	Soil	MIKTTTTIALVAAAMLTASSAFAGNKACCTKGAANTGSMACLNLATLNLTPDQKAKIEAWQA
Ga0307473_106449102	3300031820	Hardwood Forest Soil	MIKITTTALVAAAMLTASSAFAGDKACCANGASKANSMACVNLATLNLA
Ga0306925_115208571	3300031890	Soil	MIKITTIALLAVGMLMASSAFAGDKACCSKGAANASVGCVNLATLNLTADQKTKIEAWQ
Ga0307471_1025551871	3300032180	Hardwood Forest Soil	MIKITTTALVAVAMLMACSAFAGDKACCATGVSKADSMACANLATLNLTPDQKTKIETW
Ga0310810_112919162	3300033412	Soil	MIKITTTALVAIAMLTASGVFAGDKACCAKGASKADSMACVNLATL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081527

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences