Metagenome Family F081519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081519
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	77 residues
Representative Sequence	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD
Number of Associated Samples	84
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.86 %
% of genes near scaffold ends (potentially truncated)	30.70 %
% of genes from short scaffolds (< 2000 bps)	73.68 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.526 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (23.684 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.105 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.88% β-sheet: 0.00% Coil/Unstructured: 44.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13602	ADH_zinc_N_2	14.91
PF00989	PAS	2.63
PF00583	Acetyltransf_1	2.63
PF12840	HTH_20	1.75
PF01872	RibD_C	1.75
PF11716	MDMPI_N	1.75
PF08327	AHSA1	1.75
PF00486	Trans_reg_C	1.75
PF01636	APH	1.75
PF03948	Ribosomal_L9_C	1.75
PF00772	DnaB	1.75
PF01979	Amidohydro_1	1.75
PF01257	2Fe-2S_thioredx	0.88
PF06772	LtrA	0.88
PF12867	DinB_2	0.88
PF03747	ADP_ribosyl_GH	0.88
PF10009	DUF2252	0.88
PF13238	AAA_18	0.88
PF08241	Methyltransf_11	0.88
PF14329	DUF4386	0.88
PF07676	PD40	0.88
PF00436	SSB	0.88
PF00248	Aldo_ket_red	0.88
PF03476	MOSC_N	0.88
PF04191	PEMT	0.88
PF03473	MOSC	0.88
PF13565	HTH_32	0.88
PF13207	AAA_17	0.88
PF01243	Putative_PNPOx	0.88
PF01641	SelR	0.88
PF12695	Abhydrolase_5	0.88
PF13847	Methyltransf_31	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.75
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.75
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	1.75
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.75
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.88
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1905	NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)	Energy production and conversion [C]	0.88
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.88
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.88
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.28 %
Unclassified	root	N/A	37.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.40 %
Unclassified	root	N/A	37.72 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.53 %
Unclassified	root	N/A	37.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.40 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.63 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8682264	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300000890\|JGI11643J12802_10240422	Not Available	839	Open in IMG/M
3300003911\|JGI25405J52794_10050275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	893	Open in IMG/M
3300004463\|Ga0063356_100907830	Not Available	1245	Open in IMG/M
3300004479\|Ga0062595_100777632	Not Available	784	Open in IMG/M
3300005093\|Ga0062594_100417498	Not Available	1093	Open in IMG/M
3300005093\|Ga0062594_101005710	Not Available	802	Open in IMG/M
3300005168\|Ga0066809_10111432	Not Available	679	Open in IMG/M
3300005294\|Ga0065705_10259578	Not Available	1166	Open in IMG/M
3300005295\|Ga0065707_10810734	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005366\|Ga0070659_100789944	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005937\|Ga0081455_10012651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8402	Open in IMG/M
3300005937\|Ga0081455_10019883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6340	Open in IMG/M
3300005937\|Ga0081455_10232913	All Organisms → cellular organisms → Archaea	1358	Open in IMG/M
3300006049\|Ga0075417_10020008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2654	Open in IMG/M
3300006058\|Ga0075432_10115765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1003	Open in IMG/M
3300006196\|Ga0075422_10051728	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300006844\|Ga0075428_100124955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2800	Open in IMG/M
3300006844\|Ga0075428_100126848	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300006845\|Ga0075421_100365425	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300006845\|Ga0075421_100831827	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300006847\|Ga0075431_101972068	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006852\|Ga0075433_11816109	Not Available	524	Open in IMG/M
3300006865\|Ga0073934_10225812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300006865\|Ga0073934_10477235	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300006871\|Ga0075434_100036826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4839	Open in IMG/M
3300006969\|Ga0075419_10304598	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300009081\|Ga0105098_10058049	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300009081\|Ga0105098_10109943	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300009094\|Ga0111539_10196898	Not Available	2350	Open in IMG/M
3300009094\|Ga0111539_12057233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300009100\|Ga0075418_10043250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4856	Open in IMG/M
3300009100\|Ga0075418_11035055	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300009100\|Ga0075418_11229767	Not Available	812	Open in IMG/M
3300009146\|Ga0105091_10115455	Not Available	1240	Open in IMG/M
3300009146\|Ga0105091_10527227	Not Available	602	Open in IMG/M
3300009147\|Ga0114129_10450002	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1689	Open in IMG/M
3300009156\|Ga0111538_10307971	Not Available	2004	Open in IMG/M
3300009157\|Ga0105092_10090287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
3300009157\|Ga0105092_10400660	Not Available	781	Open in IMG/M
3300009162\|Ga0075423_13102734	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009168\|Ga0105104_10336708	Not Available	833	Open in IMG/M
3300009789\|Ga0126307_10000098	All Organisms → cellular organisms → Bacteria	49060	Open in IMG/M
3300009811\|Ga0105084_1010600	Not Available	1412	Open in IMG/M
3300009837\|Ga0105058_1030333	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1168	Open in IMG/M
3300010029\|Ga0105074_1003521	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300010038\|Ga0126315_10013172	All Organisms → cellular organisms → Bacteria	3977	Open in IMG/M
3300010040\|Ga0126308_10002020	All Organisms → cellular organisms → Bacteria	8464	Open in IMG/M
3300010041\|Ga0126312_10092597	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300010042\|Ga0126314_10441680	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300010362\|Ga0126377_11688497	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300010375\|Ga0105239_11755172	Not Available	719	Open in IMG/M
3300012159\|Ga0137344_1092909	Not Available	557	Open in IMG/M
3300013308\|Ga0157375_12222386	All Organisms → cellular organisms → Bacteria → Terrabacteria group	654	Open in IMG/M
3300015371\|Ga0132258_12376692	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300015372\|Ga0132256_100040473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4279	Open in IMG/M
3300015372\|Ga0132256_100764416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300015373\|Ga0132257_100423185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1622	Open in IMG/M
3300015373\|Ga0132257_100742350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1222	Open in IMG/M
3300017997\|Ga0184610_1005324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3046	Open in IMG/M
3300017997\|Ga0184610_1277567	Not Available	554	Open in IMG/M
3300018028\|Ga0184608_10069846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1422	Open in IMG/M
3300018031\|Ga0184634_10008524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3568	Open in IMG/M
3300018052\|Ga0184638_1032633	Not Available	1881	Open in IMG/M
3300018052\|Ga0184638_1044242	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300018053\|Ga0184626_10053202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300018053\|Ga0184626_10234285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	773	Open in IMG/M
3300018056\|Ga0184623_10302700	Not Available	722	Open in IMG/M
3300018056\|Ga0184623_10407409	Not Available	597	Open in IMG/M
3300018067\|Ga0184611_1166776	All Organisms → cellular organisms → Bacteria → Terrabacteria group	782	Open in IMG/M
3300018072\|Ga0184635_10004679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4370	Open in IMG/M
3300018072\|Ga0184635_10378400	Not Available	539	Open in IMG/M
3300018073\|Ga0184624_10082383	Not Available	1356	Open in IMG/M
3300018075\|Ga0184632_10058593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1669	Open in IMG/M
3300018078\|Ga0184612_10200666	Not Available	1036	Open in IMG/M
3300018078\|Ga0184612_10304274	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300018465\|Ga0190269_10671531	Not Available	717	Open in IMG/M
3300018466\|Ga0190268_11960623	Not Available	536	Open in IMG/M
3300018469\|Ga0190270_10041068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3125	Open in IMG/M
3300018469\|Ga0190270_11374533	Not Available	751	Open in IMG/M
3300018469\|Ga0190270_12040278	Not Available	632	Open in IMG/M
3300018469\|Ga0190270_12756227	Not Available	554	Open in IMG/M
3300018481\|Ga0190271_13604545	Not Available	518	Open in IMG/M
3300019377\|Ga0190264_12319582	Not Available	504	Open in IMG/M
3300019458\|Ga0187892_10018507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7014	Open in IMG/M
3300019487\|Ga0187893_10011421	All Organisms → cellular organisms → Bacteria	12906	Open in IMG/M
3300021081\|Ga0210379_10219865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300025904\|Ga0207647_10557045	All Organisms → cellular organisms → Bacteria → Terrabacteria group	635	Open in IMG/M
3300026535\|Ga0256867_10099374	Not Available	1123	Open in IMG/M
3300026973\|Ga0207479_103034	Not Available	578	Open in IMG/M
3300027006\|Ga0209896_1002493	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1747	Open in IMG/M
3300027006\|Ga0209896_1038761	Not Available	548	Open in IMG/M
3300027379\|Ga0209842_1055930	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300027561\|Ga0209887_1024981	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1407	Open in IMG/M
3300027722\|Ga0209819_10058361	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300027743\|Ga0209593_10062116	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300027743\|Ga0209593_10170249	Not Available	776	Open in IMG/M
3300027873\|Ga0209814_10022566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2562	Open in IMG/M
3300027873\|Ga0209814_10032234	Not Available	2160	Open in IMG/M
3300027880\|Ga0209481_10232990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300027900\|Ga0209253_10066418	All Organisms → cellular organisms → Bacteria	2977	Open in IMG/M
3300027909\|Ga0209382_10284246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1869	Open in IMG/M
3300027909\|Ga0209382_10451496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1424	Open in IMG/M
3300027956\|Ga0209820_1044411	Not Available	1170	Open in IMG/M
3300028878\|Ga0307278_10009157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4667	Open in IMG/M
3300030006\|Ga0299907_10035731	All Organisms → cellular organisms → Bacteria	3884	Open in IMG/M
3300030006\|Ga0299907_10080096	All Organisms → Viruses → Predicted Viral	2654	Open in IMG/M
3300030006\|Ga0299907_10085426	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300030006\|Ga0299907_10147629	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1944	Open in IMG/M
3300030619\|Ga0268386_10412033	Not Available	947	Open in IMG/M
3300030620\|Ga0302046_11469831	Not Available	528	Open in IMG/M
3300031228\|Ga0299914_11599194	Not Available	505	Open in IMG/M
3300031852\|Ga0307410_11898327	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.79%
Host-Associated	Host-Associated	34.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	35.96%
Plants	Host-Associated → Plants	34.21%
Aquatic	Environmental → Aquatic	29.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	34.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.32%
Sediment	Environmental → Aquatic → Sediment	15.79%
Freshwater	Environmental → Aquatic → Freshwater	12.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.75%
Cave	Environmental → Terrestrial → Cave	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.53%
Sand	Environmental → Terrestrial → Soil → Sand	6.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.63%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.53%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.05%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	14.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.51%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.51%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.63%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.88%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026973	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-C (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02808080	2088090015	Soil	LWKARSSYTATVTKKPDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSVPHGVGLRTYMLAAIIILGTVVGVIGLIALLLNLD
JGI11643J12802_102404222	3300000890	Soil	VTKKPDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSVPHGVGLRTYMLAAIIILGTVVGVIGLIALLLNLD*
JGI25405J52794_100502751	3300003911	Tabebuia Heterophylla Rhizosphere	VTKKPDRDRDIVQELREDAQWSGWTNTFGRQRGWGRPRALARGVGVRTYMLAAVIIVGIVAAAIGLIALLLNFD*
Ga0063356_1009078302	3300004463	Arabidopsis Thaliana Rhizosphere	LWKARSSYTATVTKKPDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSVPHGVGLRTYMLAAIIILGTVVGVIGLIALLLNLD*
Ga0062595_1007776322	3300004479	Soil	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLRYGPGLRTYMLAAVLILGTVVAVIALIALLLNLD*
Ga0062594_1004174981	3300005093	Soil	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLRYGPGLRTYMVAAVLILGTVVAVIGLIALLL
Ga0062594_1010057102	3300005093	Soil	VTKKRDRHRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIILGTVVAAIGLIALLLNLD*
Ga0066809_101114321	3300005168	Soil	VTKKRDRERDIVREHQEDAKWSMWTNTLGRQRGWGRPRSLPYGPGLRTYMLAAVLILGIVVAVIGLIALLLNLN*
Ga0065705_102595782	3300005294	Switchgrass Rhizosphere	VTTKRDGERDIVWELQEDAKWSMWTNTFGRQRGWGRPRSLPYGPGLRTYMLAAVLILGTVVAVIGLIALLLNLD*
Ga0065707_108107342	3300005295	Switchgrass Rhizosphere	ATVTTKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPYGPGLRTYMLAAVLILGTVVAVIGLIALLLEVGQREDVEQLSSGSGAECV*
Ga0070659_1007899441	3300005366	Corn Rhizosphere	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLRYGPGLRTYMVAAVLILGTVVAVIGLIALLLNLN*
Ga0081455_1001265110	3300005937	Tabebuia Heterophylla Rhizosphere	VAKKRDRGGDVVRELRQDADWSMWTNTYGRQRGWGRPRSLPYGVGLRTYMLAAVLVVGAVLAVIGLIALLVNLD*
Ga0081455_100198835	3300005937	Tabebuia Heterophylla Rhizosphere	VTKKRDRDRDIVQELQEDAQWSMWTNTFGRHRGWGRPRSLSNGVGLGTYMLAAVIILGTVAAVVGLIALLLNLD*
Ga0081455_102329132	3300005937	Tabebuia Heterophylla Rhizosphere	VTKKRNRDRDLIQELQEDAQWSGWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAAVGLIALLLNLD*
Ga0075417_100200084	3300006049	Populus Rhizosphere	VTKKPDRDRDIVQELQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLGTYMLAAVIILGTVGAVIGLIALLLNLD*
Ga0075432_101157653	3300006058	Populus Rhizosphere	LQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLGTYMLAAVIILGTVGAVIGLIALLLNLD
Ga0075422_100517282	3300006196	Populus Rhizosphere	VTKKPDRDRDIVQELQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLETYMLAAVIILGTVGAVIGLIVLLLNLD*
Ga0075428_1001249553	3300006844	Populus Rhizosphere	VTKKRDRERDVVRELQEDAKWSMWTNTFGRQRGWGRPRSVPYGPGLRTYMLAAVLILGTVVAVIGLVALLLNPD*
Ga0075428_1001268484	3300006844	Populus Rhizosphere	VTKKRDRDRDIVQELREDAQWSAWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAAVGLIALLLNLD*
Ga0075421_1003654252	3300006845	Populus Rhizosphere	MAGQSYTATVTKKRDRDRDIVRELQEDAEWSMWTNTFGRQRGWGRPRSLPHGAGLRTYMLAAIIIFGTVVAVIGLIALLLNLD*
Ga0075421_1008318272	3300006845	Populus Rhizosphere	VRRPPAKAHVEERRQSYTATVTKKRDRDRDIVQELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMVAAIIVLGTVVAVIGLIALLLNLG*
Ga0075431_1019720681	3300006847	Populus Rhizosphere	VTKKRDRDRDIVQELQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLGTYMLAAVIILGTVGAVIGLIALLLNLD*
Ga0075433_118161091	3300006852	Populus Rhizosphere	VRAQAGARLELFGSLAKPLSRATSSYTADVTKKPDRDVVRELQDDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYLLAALVILGSVAAVIGLIALLLTLD*
Ga0073934_102258121	3300006865	Hot Spring Sediment	TMTRKRDRERDIVQELHEDAKWSSWTNTFARQRGWGRGSLPRDPGLRTFMLAAVLSLGGVAAVIGIIALINNLG*
Ga0073934_104772351	3300006865	Hot Spring Sediment	SYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLLNLD*
Ga0075434_1000368266	3300006871	Populus Rhizosphere	EDRGPTLRSRSYTAAVTKKPDRDRDIVQELQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLGTYMLAAVIILGTVGAVIGLIALLLNLD*
Ga0075419_103045982	3300006969	Populus Rhizosphere	VRRPPAKAHVEERRQSYTATVTKKRDRDRDIVQELQEDAKWSMWTNTFGRQRGWGRPHSLPHGVGLRTYMLAAIIILGTVVAAIGLIALILNLD*
Ga0105098_100580492	3300009081	Freshwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD*
Ga0105098_101099431	3300009081	Freshwater Sediment	LRSAGPPYTATVTKKRDRDRDIVRELQEDANWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAIIILVTAVAAIALIALLLNLD*
Ga0111539_101968984	3300009094	Populus Rhizosphere	VTKKRDRNRDIVRELQEDANWSMWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIILGTVVAAIGLIALLLNLD*
Ga0111539_120572332	3300009094	Populus Rhizosphere	VRAQAGARLELFGSLAKPLSRATSSYTADVTKKPDRDVVRELQDDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYLLAALVILGSVAAVIGLVALLLNPD*
Ga0075418_100432504	3300009100	Populus Rhizosphere	VTKKRDRDRDIVQELREDAQWSAWTNTFGRQRGWGRPSSLPHGVGLRTYMLAAVIILGTVVAAVGLIALLLNLD*
Ga0075418_110350552	3300009100	Populus Rhizosphere	VEAVEDRGPTLRSRSYTAAVTKKPDRDRDIVQELQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLGTYMLAAVIILGTVGAVIGLIALLLNLD*
Ga0075418_112297672	3300009100	Populus Rhizosphere	MAGQSYTATVTKKRDRDRDIVRELQEDAEWSMWTNTFGRQRGWGRPSSLPHGAGLRTYMLAAIIIFGTVVAVIGLIALLLNLD*
Ga0105091_101154552	3300009146	Freshwater Sediment	VTKKRDRDRDIVRELQEDANWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAIIILVTAVAAIALIALLLNLD*
Ga0105091_105272271	3300009146	Freshwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGWQRGWGRPHSLPHGVWLRTYMLAAVIIFGTVVAVIGLIAPLLNLD*
Ga0114129_104500021	3300009147	Populus Rhizosphere	VTRKRDRNRDIVQELQEDAKWSMWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIILGTV
Ga0111538_103079711	3300009156	Populus Rhizosphere	MRSAGNAPIYTATVTKKRDCNRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIILGTVVAAIGLIALLLNLD*
Ga0105092_100902873	3300009157	Freshwater Sediment	KKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIAVLLNLD*
Ga0105092_104006602	3300009157	Freshwater Sediment	LRSAGQSYTATVTKKRDRDRDIVQELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAIIILGTVVAAIGLIALLLNLD*
Ga0075423_131027342	3300009162	Populus Rhizosphere	VTKKPDRDVVRELQDDAEWSGWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIIL
Ga0113563_116243791	3300009167	Freshwater Wetlands	VTRKRDERDIVQELQEDAKWSSWTNTFVRHRGWGRGSPPRDPGWRTFMLAAVLVLGTVAAVVGIIALLLSLR*
Ga0105104_103367081	3300009168	Freshwater Sediment	LRSAGQSYTATVTKKRDRDRDIVQELQEDAKWSMWTNTFGRQRGWGRPRSLSHGVGLRTYMLAAIIILGAVVAAIGLIALLLNLD*
Ga0126307_1000009815	3300009789	Serpentine Soil	MTKRDRDRDIVREFQEDAKWSMWTNTFGRQRGWGRPRSLAHGVGVRTYMLAAIIILGAVFAVIGIIALLLDLD*
Ga0105084_10106002	3300009811	Groundwater Sand	VTKKRDREQDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPYGPGLRTYMLAAVLILGTVVAVIGLIALLLNLD*
Ga0105058_10303332	3300009837	Groundwater Sand	VTKKRDGERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD*
Ga0105074_10035212	3300010029	Groundwater Sand	LHSARSFYTATVTKKRDREPDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLAYGPGLRTYMLAVVLILGMVVSVLGFIALLLNLD*
Ga0126315_100131721	3300010038	Serpentine Soil	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRFLPYGVGLRTYMLAAVLILGIVVGVIGLIALVLNVN*
Ga0126308_100020203	3300010040	Serpentine Soil	MTKRDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLAHGVGVRTYMLAAIIILGAVFAVIGIIALLLDLD*
Ga0126312_100925973	3300010041	Serpentine Soil	VTKKRDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLAHGVGIRTYMLAAIIILGAVVALIGIIALLLNLD*
Ga0126314_104416802	3300010042	Serpentine Soil	VTKKRDGDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLAHGVGIRTYMLAAIIILGAVFAVIGIIALLLDLD*
Ga0126377_116884972	3300010362	Tropical Forest Soil	VTKKRDRERDVVRELQEDAKWSMWTNTVARQRGWGRPRSLPHGVGLRTYMLAAILIVGSAVAVIGLIALLVNLD*
Ga0105239_117551721	3300010375	Corn Rhizosphere	VTKKRDRERDVVRELQEDAKWSMWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIILGTVVAAIGLIALLLNLD*
Ga0137344_10929092	3300012159	Soil	ATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIAVLLNLD*
Ga0157375_122223861	3300013308	Miscanthus Rhizosphere	QRRSSLTANVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLRYGPGLRTYMVAAVLILGTVVAVIGLIALLLNLN*
Ga0132258_123766922	3300015371	Arabidopsis Rhizosphere	VTKKRDQDVVRELQEDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYMLAALIILGTVAAVIGAIALLLALD*
Ga0132256_1000404731	3300015372	Arabidopsis Rhizosphere	VTKKPDRDVVRELQDDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYMLAALIILGS
Ga0132256_1007644161	3300015372	Arabidopsis Rhizosphere	VTKKRDQDVVRELQEDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYMLAAVIILGTVAAVIGLIALLLTLD*
Ga0132257_1004231854	3300015373	Arabidopsis Rhizosphere	MRPDPSTKPLSRATSSYTADVTKKRDQDVVRELQEDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYMLAALIILGTVAAVIGAIALLLALD*
Ga0132257_1007423501	3300015373	Arabidopsis Rhizosphere	TSSYTADVTKKPDRDVVRELQDDAEWSGWTNTFGRQRGWGRPRSLRYGVGVRTYMLAALVILGSVAAVIGLIALLLTLD*
Ga0184610_10053242	3300017997	Groundwater Sediment	LWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLLNLD
Ga0184610_12775672	3300017997	Groundwater Sediment	MTRRRDRQRDIVQELQEDAKWSAWTNTFERHRGWGRGSLPRDPGWRTFMLSAVVIVGIVVAVIGLIVLALTLD
Ga0184608_100698462	3300018028	Groundwater Sediment	LWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIAVLLNLD
Ga0184634_100085243	3300018031	Groundwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLLNLD
Ga0184638_10326332	3300018052	Groundwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRFLPYGVGLRTYMLAVVLILGIVVGVIGLIALVLNVN
Ga0184638_10442422	3300018052	Groundwater Sediment	AGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLLNLD
Ga0184626_100532023	3300018053	Groundwater Sediment	ALWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLLNLD
Ga0184626_102342852	3300018053	Groundwater Sediment	LCTAASYTLTVTRRRDRERDIVEELQEDAKWSSWTNTFARQRGWGRGSLPRDPGLRTYMLAAVLVLGTVVAVIGLIVVLLNLD
Ga0184623_103027002	3300018056	Groundwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPYGVGLRTYMLAVVLILGIVVGVIGLIALVLNVN
Ga0184623_104074092	3300018056	Groundwater Sediment	LWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLL
Ga0184611_11667762	3300018067	Groundwater Sediment	VTKKRDRDRDIVQELQEDANWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLTAIIILGTVVAVIGLIALLLNLD
Ga0184635_100046791	3300018072	Groundwater Sediment	LWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFG
Ga0184635_103784001	3300018072	Groundwater Sediment	VTTKRDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPHSLPHGVGLRTYMLAAIIILGTVVAVIGLIALLLNLD
Ga0184624_100823834	3300018073	Groundwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLRNLD
Ga0184632_100585931	3300018075	Groundwater Sediment	HRERGHALWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIAVLLNLD
Ga0184612_102006662	3300018078	Groundwater Sediment	VTKKRDREPDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPYGPGLRTYMLAAVLILGIVVAVIGLIALLLNLD
Ga0184612_103042741	3300018078	Groundwater Sediment	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFG
Ga0190269_106715312	3300018465	Soil	VSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYILAAVIILGTVVAVIGLIALLLNLD
Ga0190268_119606231	3300018466	Soil	VQGPSYTATVTKKRDHRDIVRELHEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAIIILVTAVAAIALIALLLNLD
Ga0190270_100410685	3300018469	Soil	LRSAGPPYTATVTKKRDRDRDIVRELQEDANWSMWTNTFGRQRGWGRPRSVPDGVGLRTYMLAAIIILGTVVAVIGLIALLLNLD
Ga0190270_113745331	3300018469	Soil	ATVTKKRDRDRDIVQELQEDAKWSMWTNTFGRQRGWGRPRSVPHSVGLRTYMLAAIIILGTVVAAIGLIALLLNLD
Ga0190270_120402782	3300018469	Soil	ALWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD
Ga0190270_127562271	3300018469	Soil	LQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIALLLNLD
Ga0190271_136045451	3300018481	Soil	ELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAITILGTVVAVIGLIALLLNL
Ga0190264_123195821	3300019377	Soil	VSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTY
Ga0187892_100185077	3300019458	Bio-Ooze	LERRVVLHCDCDEERRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVLILGTVVAVIGLIALLLNLD
Ga0187893_1001142111	3300019487	Microbial Mat On Rocks	VTKRRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVLILGTVVAVIGLIALLLNLD
Ga0210379_102198652	3300021081	Groundwater Sediment	RELQEDAKWSMWTNTFGRQRGWGRPRDLSYGPGLRTYTLAAVLILGTVVAVIGLIALLLNLD
Ga0207647_105570452	3300025904	Corn Rhizosphere	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLRYGPGLRTYMVAAVLILGTVVAVIGLIALLLNLN
Ga0256867_100993741	3300026535	Soil	VTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIAPLLNLD
Ga0207479_1030342	3300026973	Soil	VTKNRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPYGPGLRTYMLAAVLILGTVVAVIALIALLLNLD
Ga0209896_10024932	3300027006	Groundwater Sand	VTKKRDGERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD
Ga0209896_10387612	3300027006	Groundwater Sand	VTKKRDREQDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPYGPGLRTYMLAAVLILGTVVAVIGLIALLLNLD
Ga0209842_10559302	3300027379	Groundwater Sand	LRSAGPPYTATVTKKRDRDRDIVRELQEDANWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAIIILVTAVAAIALIALL
Ga0209887_10249812	3300027561	Groundwater Sand	VTKKRDREQDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLAYGPGLRTYMLAVVLILGMVVSVLGFIALLLNLD
Ga0209819_100583612	3300027722	Freshwater Sediment	KRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLTALLLNPD
Ga0209593_100621161	3300027743	Freshwater Sediment	AGPPYTSTVTKKRDRDRDIVRELQEDANWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAIIILVTAVAAIALIALLLNLD
Ga0209593_101702491	3300027743	Freshwater Sediment	DRERGRALRSAGPSYTATVTKKRDRDRDIAQELQEDANWSMWTNTFGRQRGWGRPRSLPHGGGLRTYMLAAIIILGTVVAVIGLIALLLNLD
Ga0209814_100225662	3300027873	Populus Rhizosphere	VTKKPDRDRDIVQELQEDAQWSMWTNTFGRRRGWGRPRSLPHGVGLGTYMLAAVIILGTVGAVIGLIALLLNLD
Ga0209814_100322344	3300027873	Populus Rhizosphere	NRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSVPNGVGLRTYMLAAIIILGTVVAAIGLIALLLNLD
Ga0209481_102329903	3300027880	Populus Rhizosphere	VTKKRDRDRDIVQELREDAQWSAWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAAVGLIALLLNLD
Ga0209253_100664181	3300027900	Freshwater Lake Sediment	VTRKRDERDIVQELQEDAKWSSWTNTFVRHRGWGRGSLPRDPGWRTFMLAAVLVLGTVAAVIGIIALLLSLR
Ga0209382_102842464	3300027909	Populus Rhizosphere	VRRPPAKAHVEERRQSYTATVTKKRDRDRDIVQELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMVAAIIVLGTVVAVIGLIALLLNLG
Ga0209382_104514964	3300027909	Populus Rhizosphere	VTKKRDRERDVVRELQEDAKWSMWTNTFGRQRGWGRPRSVPYGPGLRTYMLAAVLILGTVVAVIGLV
Ga0209820_10444112	3300027956	Freshwater Sediment	RERGRALRSAGPPYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD
Ga0307278_100091577	3300028878	Soil	LWKAGSSYTATVTKKPDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGVRTYMLAAIIILGTVVGVIGLIALLLNLD
Ga0299907_100357315	3300030006	Soil	LWSAGSSYTATVTKKRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIIFGTVVAVIGLIAPLLNLD
Ga0299907_100800962	3300030006	Soil	LTKKRDRDRDIVRELQEDANWSMWTNTFGRQRGWGRPRSLPHGVGFRTYMLAAITILGTVVAVIGLIALLLNLD
Ga0299907_100854262	3300030006	Soil	VRRPRARARFERRRAVLTATVTKKRDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPDGVGLRTYMLAAIIILGTVVAVIGLIALLFNLD
Ga0299907_101476291	3300030006	Soil	LWSAGSSYTATVTKRRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVALIGLIALLLNLD
Ga0268386_104120332	3300030619	Soil	LWSAGSSYTASVTKRRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVALIGLIAPLLNLD
Ga0302046_114698311	3300030620	Soil	VTRRRDRERDIVQELQEDAKWSSFTNTFTRHRGWGRSLPRDPGVRTYMLAAVLIGGVVV
Ga0299914_115991941	3300031228	Soil	LWSAGSSYTATVTKRRDRERDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLPHGVGLRTYMLAAVIILGTVVAVIGLIALLLNLD
Ga0307410_118983271	3300031852	Rhizosphere	MTKRDRDRDIVRELQEDAKWSMWTNTFGRQRGWGRPRSLAHGVGIRTYMLAAIIILGAVFAVIGIIALLLDLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences