Metagenome / Metatranscriptome Family F081512

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081512
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	92 residues
Representative Sequence	EDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVIVTGTAALADSGERPLIDQAAFEEDWPADVRTSVICLPLNTVEGFELRDP
Number of Associated Samples	97
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.58 %
% of genes near scaffold ends (potentially truncated)	71.05 %
% of genes from short scaffolds (< 2000 bps)	84.21 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.579 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.561 % of family members)
Environment Ontology (ENVO)	Unclassified (28.947 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.56% β-sheet: 24.79% Coil/Unstructured: 72.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00106	adh_short	63.16
PF12724	Flavodoxin_5	3.51
PF16320	Ribosomal_L12_N	2.63
PF12900	Pyridox_ox_2	1.75
PF01658	Inos-1-P_synth	0.88
PF04997	RNA_pol_Rpb1_1	0.88
PF04563	RNA_pol_Rpb2_1	0.88
PF04565	RNA_pol_Rpb2_3	0.88
PF13474	SnoaL_3	0.88
PF00542	Ribosomal_L12	0.88
PF01471	PG_binding_1	0.88
PF00466	Ribosomal_L10	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0085	DNA-directed RNA polymerase, beta subunit/140 kD subunit	Transcription [K]	1.75
COG0086	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	Transcription [K]	0.88
COG0222	Ribosomal protein L7/L12	Translation, ribosomal structure and biogenesis [J]	0.88
COG0244	Ribosomal protein L10	Translation, ribosomal structure and biogenesis [J]	0.88
COG1260	Myo-inositol-1-phosphate synthase	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.58 %
Unclassified	root	N/A	18.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.58 %
Unclassified	root	N/A	18.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.58 %
Unclassified	root	N/A	18.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.75 %
Unclassified	root	N/A	18.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.88 %
Unclassified	root	N/A	18.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.72 %
Unclassified	root	N/A	18.42 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.42 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	10.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	10.53 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.63 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.63 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.42 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	10.53 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	9.65 %
Paraconexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae	2.63 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.63 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.42 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	8.77 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	8.77 %
Paraconexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter	2.63 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.63 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	1.75 %
unclassified Pseudonocardiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae	1.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.42 %
Microlunatus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	8.77 %
Saccharopolyspora erythraea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea	8.77 %
Paraconexibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	2.63 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	2.63 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	1.75 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	1.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.42 %
Saccharopolyspora erythraea NRRL 2338	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	8.77 %
Microlunatus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	8.77 %
Streptomyces sp. ERV7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ERV7	2.63 %
Paraconexibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	2.63 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1.75 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	1.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_2497_length_1968_cov_10.371443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2000	Open in IMG/M
3300000550\|F24TB_10665935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1430	Open in IMG/M
3300004643\|Ga0062591_102568599	Not Available	536	Open in IMG/M
3300005164\|Ga0066815_10023226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300005337\|Ga0070682_101022132	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005354\|Ga0070675_101502094	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005441\|Ga0070700_100796943	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005578\|Ga0068854_100440423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ERV7	1086	Open in IMG/M
3300005718\|Ga0068866_10690023	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006058\|Ga0075432_10505869	Not Available	539	Open in IMG/M
3300006196\|Ga0075422_10552126	Not Available	528	Open in IMG/M
3300006577\|Ga0074050_11168588	Not Available	651	Open in IMG/M
3300006581\|Ga0074048_11912913	Not Available	631	Open in IMG/M
3300006847\|Ga0075431_101329012	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006880\|Ga0075429_100152570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	2023	Open in IMG/M
3300006881\|Ga0068865_100236447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1436	Open in IMG/M
3300006894\|Ga0079215_10054272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1572	Open in IMG/M
3300006953\|Ga0074063_10362457	Not Available	629	Open in IMG/M
3300006969\|Ga0075419_10288210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1105	Open in IMG/M
3300007004\|Ga0079218_10348850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1231	Open in IMG/M
3300009081\|Ga0105098_10307809	Not Available	763	Open in IMG/M
3300009093\|Ga0105240_10726922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1081	Open in IMG/M
3300009094\|Ga0111539_10015805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9375	Open in IMG/M
3300009094\|Ga0111539_11857762	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300009100\|Ga0075418_10078680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3508	Open in IMG/M
3300009100\|Ga0075418_11748045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	676	Open in IMG/M
3300009147\|Ga0114129_11347399	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300009148\|Ga0105243_11829760	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009156\|Ga0111538_10213151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2448	Open in IMG/M
3300009162\|Ga0075423_10172450	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300009551\|Ga0105238_11059353	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009789\|Ga0126307_10012192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6295	Open in IMG/M
3300009789\|Ga0126307_10023373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4696	Open in IMG/M
3300009789\|Ga0126307_10505034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	976	Open in IMG/M
3300009840\|Ga0126313_10373229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	1128	Open in IMG/M
3300009840\|Ga0126313_11561260	Not Available	549	Open in IMG/M
3300010036\|Ga0126305_10131179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1541	Open in IMG/M
3300010036\|Ga0126305_10141373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	1490	Open in IMG/M
3300010036\|Ga0126305_10250622	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300010037\|Ga0126304_10007360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5844	Open in IMG/M
3300010037\|Ga0126304_11029513	Not Available	562	Open in IMG/M
3300010037\|Ga0126304_11253317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	509	Open in IMG/M
3300010041\|Ga0126312_10118612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1820	Open in IMG/M
3300010042\|Ga0126314_10707981	Not Available	738	Open in IMG/M
3300010044\|Ga0126310_10019937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3338	Open in IMG/M
3300010045\|Ga0126311_10243690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1331	Open in IMG/M
3300010166\|Ga0126306_10221030	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300010166\|Ga0126306_10361403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	1129	Open in IMG/M
3300010373\|Ga0134128_11754975	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300011000\|Ga0138513_100006691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1339	Open in IMG/M
3300011003\|Ga0138514_100041247	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012491\|Ga0157329_1011416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	711	Open in IMG/M
3300012884\|Ga0157300_1008791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1165	Open in IMG/M
3300012891\|Ga0157305_10184799	Not Available	587	Open in IMG/M
3300012905\|Ga0157296_10240627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	601	Open in IMG/M
3300012907\|Ga0157283_10140555	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012911\|Ga0157301_10060236	Not Available	1009	Open in IMG/M
3300012915\|Ga0157302_10099856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	914	Open in IMG/M
3300012938\|Ga0162651_100058862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	617	Open in IMG/M
3300012939\|Ga0162650_100003444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1730	Open in IMG/M
3300012941\|Ga0162652_100107573	Not Available	504	Open in IMG/M
3300014745\|Ga0157377_11395045	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300015077\|Ga0173483_10338871	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300015371\|Ga0132258_11097930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2011	Open in IMG/M
3300018031\|Ga0184634_10064473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1544	Open in IMG/M
3300018031\|Ga0184634_10483265	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300018056\|Ga0184623_10061027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300018072\|Ga0184635_10302480	Not Available	626	Open in IMG/M
3300018465\|Ga0190269_11468493	Not Available	559	Open in IMG/M
3300018466\|Ga0190268_11875351	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300019767\|Ga0190267_10371062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	783	Open in IMG/M
3300019767\|Ga0190267_10558258	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300019767\|Ga0190267_10634505	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300019767\|Ga0190267_10965333	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300019869\|Ga0193705_1020380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1442	Open in IMG/M
3300019884\|Ga0193741_1045004	Not Available	1139	Open in IMG/M
3300019884\|Ga0193741_1129970	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300020020\|Ga0193738_1004795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	4743	Open in IMG/M
3300021078\|Ga0210381_10000389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	8942	Open in IMG/M
3300021510\|Ga0222621_1005971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2167	Open in IMG/M
3300022195\|Ga0222625_1395939	Not Available	537	Open in IMG/M
3300022694\|Ga0222623_10418191	Not Available	509	Open in IMG/M
3300022756\|Ga0222622_10923766	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300024055\|Ga0247794_10180029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300024055\|Ga0247794_10342335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	510	Open in IMG/M
3300025899\|Ga0207642_10533193	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025901\|Ga0207688_10213875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ERV7	1159	Open in IMG/M
3300025924\|Ga0207694_10625798	Not Available	906	Open in IMG/M
3300026023\|Ga0207677_11701363	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026142\|Ga0207698_11263524	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300028380\|Ga0268265_10278396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1496	Open in IMG/M
3300028380\|Ga0268265_11169177	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300028381\|Ga0268264_11983514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	591	Open in IMG/M
3300028720\|Ga0307317_10025803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1815	Open in IMG/M
3300028721\|Ga0307315_10157803	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300028782\|Ga0307306_10199536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300028784\|Ga0307282_10013973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3273	Open in IMG/M
3300028790\|Ga0307283_10026551	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1262	Open in IMG/M
3300028802\|Ga0307503_10100761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1230	Open in IMG/M
3300028814\|Ga0307302_10632860	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300030903\|Ga0308206_1158657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	550	Open in IMG/M
3300030904\|Ga0308198_1023958	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031094\|Ga0308199_1065317	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031170\|Ga0307498_10010564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300031824\|Ga0307413_10085621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2035	Open in IMG/M
3300031908\|Ga0310900_11428572	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031943\|Ga0310885_10508495	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300032002\|Ga0307416_100480487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	1302	Open in IMG/M
3300032126\|Ga0307415_100760931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	880	Open in IMG/M
3300032205\|Ga0307472_100615769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ERV7	961	Open in IMG/M
3300034113\|Ga0364937_009759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	1441	Open in IMG/M
3300034151\|Ga0364935_0150635	Not Available	735	Open in IMG/M
3300034690\|Ga0364923_0007680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora erythraea → Saccharopolyspora erythraea NRRL 2338	2315	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.18%
Host-Associated	Host-Associated	29.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.40%
Plants	Host-Associated → Plants	29.82%
Aquatic	Environmental → Aquatic	8.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.53%
Sediment	Environmental → Aquatic → Sediment	6.14%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	4.39%
Freshwater	Environmental → Aquatic → Freshwater	2.63%
Floodplain	Environmental → Terrestrial → Floodplain	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.14%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	4.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.63%
Loam	Environmental → Terrestrial → Soil → Loam	2.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.40%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	4.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00054250	2140918013	Soil	LGYQSGRGHRSVVVSYAIADDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVIVTGMAELAESGQRPLIDQAAFGEDWPSDVRTSIICLPLNAIEGFELRDP
F24TB_106659353	3300000550	Soil	GDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGRAALAGNGQKPLIDQTAFQEEWPADVPTSVICLPLTAIEGFELRDP*
Ga0062591_1025685991	3300004643	Soil	SGRGHRSVVVSYAVAGDQILMRLPDYNDIVHYAPGCEISLDVDGGTPAAHRETVIVTGMAELAESDQRPLIDQAAFEEDWPSDVRTSIICLPLHAVEGFELRDS*
Ga0066815_100232261	3300005164	Soil	DIVHYAPGAEISLDVDGGTPAAHRETVIVTGTAALAESGQRPLIDQAAFEEDWPPDVRTSVICLPLNTVEGFELRDS*
Ga0070682_1010221321	3300005337	Corn Rhizosphere	QSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS*
Ga0070675_1015020942	3300005354	Miscanthus Rhizosphere	NDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP*
Ga0070700_1007969431	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	YAVAGDQILLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP*
Ga0068854_1004404232	3300005578	Corn Rhizosphere	HEGRLGYQSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS*
Ga0068866_106900232	3300005718	Miscanthus Rhizosphere	PDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS*
Ga0075432_105058691	3300006058	Populus Rhizosphere	LGYQSGRGHRSVVVSYAIAEDQILMRLPDYNDIVHYAPGCEVRLDVDGGTPAAHRETVIVTGTAELAEGPQRPLIDKAAFEEDWPADVRTSVICLPVSAVEGFELRDP*
Ga0075422_105521261	3300006196	Populus Rhizosphere	IVHYAPGCEVRLDVDGGTPAAHRETVIVTGTAELAEGPQRPLIDKAAFEEDWPADVRTSVICLPVSAVEGFELRDP*
Ga0074050_111685881	3300006577	Soil	RLPDYNDIVHYAPGSEVRLDVEGGTPAAHRETVVVTGKAALAENGQRPLIDQTPFQEEWPPDVRTSIICVPFTAIEGFELRDP*
Ga0074048_119129131	3300006581	Soil	EDQILVRLPDYNDIVHYAPGSEVRLDVEGGTPAAHRETVVVTGKAALAENGQRPLIDQTPFQEEWPPDVRTSIICVPFTAIEGFELRDP*
Ga0075431_1013290121	3300006847	Populus Rhizosphere	VRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVTVTGTAELAETDKRPLIDQAAFLEDWPADVRTSVICLALNTVEGFELRDQ*
Ga0075429_1001525701	3300006880	Populus Rhizosphere	SGKGPRSVVVSYAVAEDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGRAALAGNGQKPLIDQTAFEEEWPADVPTSVICVPLTAIEGFELRDP*
Ga0068865_1002364472	3300006881	Miscanthus Rhizosphere	GYQSGRGHRSVVVSYAVAGDQILLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP*
Ga0079215_100542721	3300006894	Agricultural Soil	LPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVSTSIICVPFTAIEGFELREQ*
Ga0074063_103624572	3300006953	Soil	PDYNDIVHYAPGAEISLDVDGGTPAAHRETVVVTGTAALADSGQRPLIDQAAFEEDWPPDVRTSVICLPLNTVEGFELRDS*
Ga0075419_102882101	3300006969	Populus Rhizosphere	IVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS*
Ga0079218_103488501	3300007004	Agricultural Soil	NDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVPTSVICVPLTAIEGYELRDP*
Ga0105098_103078092	3300009081	Freshwater Sediment	VVLYAIAEDQILMRLPDYNDIVHYAPGCEVRLDVDGGTPAAHRETVIVTGTAELAEGAQRPLIDKAAFDEDWPSDVRTSVICLPVSAVEGFELRDP*
Ga0105240_107269221	3300009093	Corn Rhizosphere	VVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS*
Ga0111539_100158054	3300009094	Populus Rhizosphere	VVSYAIAEDQILMRLPDYNDIVHYAPGCEVRLDVDGGTPAAHRETVIVTGTAELAEGPQRPLIDKAAFEEDWPADVRTSVICLPVSAVEGFELRDP*
Ga0111539_118577621	3300009094	Populus Rhizosphere	EGRLGYQSGRGHRSVVVFYAVAGDQILVRLPDYNDIVRYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENTHRPLIDQAAFEEDWPSDVRTSVICLPLSTVEGFELRDS*
Ga0075418_100786802	3300009100	Populus Rhizosphere	VVSYAVAEDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGRAALAGNGQKPLIDQTAFEEEWPADVPTSVICVPLTAIEGFELRDP*
Ga0075418_117480451	3300009100	Populus Rhizosphere	LLRLPDYNNIVQYAPGSEVSLDVDGGTPAAHRETVVVTGKATLAGDRQEPLIDRTAFLEEWPADVQTSVICVPVTAIEGFEIRDP*
Ga0114129_113473991	3300009147	Populus Rhizosphere	LPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGRAALAGNGQKPLIDQTAFEEEWPADVPTSVICVPLTAIEGFELRDP*
Ga0105243_118297602	3300009148	Miscanthus Rhizosphere	VHYAPGAEVSLDVDGGTPAAHRETVVVTGTAALAESGQRPLIDQAAFEEDWPPDVRTSVICLPLNTVEGFELRDR*
Ga0111538_102131512	3300009156	Populus Rhizosphere	VVSYAVAEDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGKAALAGNGQKPLIDQTAFEEEWPAGVPTSVICVPLTAIEGFELRDP*
Ga0075423_101724502	3300009162	Populus Rhizosphere	LGYQSGRGHRSVVVSYAIAEDQILMRLPDYNVIVHYAPACQVRLDVDGGPPAEHRETVIVTGTAELAEGPQRPLIDKAAFEEDWPADVRTSVICLPVSAVEGFELRDP*
Ga0105238_110593532	3300009551	Corn Rhizosphere	SGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS*
Ga0126307_100121922	3300009789	Serpentine Soil	MRLPDYNDIVHYAPGSEVRIDVDGGTPAAHRETVVVTGKAALAGGDQKPLIDQTAFQEEWPPDVSTSVICLPLTAIEGFELRDP*
Ga0126307_100233736	3300009789	Serpentine Soil	LYAIAEDQILMRLPDYNDIVHYAPGCEVRLDIDGGTPAAHRETVIVTGTAELAEGAQRPLIDKAAFDEDWPSDVRTSVICLPVSAVEGFELRDP*
Ga0126307_105050342	3300009789	Serpentine Soil	LVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVPTSIICVPLTAIEGFELREQ*
Ga0126313_103732292	3300009840	Serpentine Soil	LVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVPTSIICLPLTAIEGFELREQ*
Ga0126313_115612601	3300009840	Serpentine Soil	LGYQSGRGHRCVVVSYAVTGDQILVRLPDYNDIVRYAPGAEVSLDVEGGTAAAHRETVIVTGMAELAESAHRPLIDQAAFVENWPPDVPTSIICLPLNAMEGFELRNL*
Ga0126305_101311793	3300010036	Serpentine Soil	SGKGPRSVVVSYAVAEDKIVLRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGRAALAENGQEPLIDQTALLEQWPPDVPTQVICVPLTAVEGFELRDP*
Ga0126305_101413732	3300010036	Serpentine Soil	MRLPDYNDIVHYAPGSEVRIDVDGGTPAAHRETVVVTGKAALAGGDQKPLIDQTAFQEEWPLDVSTSVICLPLTAIEGFELRDP*
Ga0126305_102506222	3300010036	Serpentine Soil	PDYNDIVHYAPGCEVRLDVAGGTPAAHRETVIVTGTAELAEGAQRPLIDKAAFDEDWPSDVRTSVICLPVSAVEGFELRDP*
Ga0126304_100073603	3300010037	Serpentine Soil	LVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVPTSIICVPLTAIEGFELREQ*
Ga0126304_110295131	3300010037	Serpentine Soil	DQILMRLPDYNDIVHYAPGCEVRLDVAGGTPAAHRETVIVTGTAELAEGAQRPLIDKAAFDEDWPSDVRTSVICLPVSAVEGFELRDP*
Ga0126304_112533171	3300010037	Serpentine Soil	VLRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGQAALAENGQEPLIDQTALLEQWPPDVPTQVICVPLTAVEGFELRDP*
Ga0126312_101186122	3300010041	Serpentine Soil	VVSYSVADDQILVKLPDYNDIVRYAPGSQISLDVDGGTPAAHRETVIVTGTAALADSGQRPLIDKAAFAEDWPSDVRTSVICLPLNTVEGFELRDP*
Ga0126314_107079811	3300010042	Serpentine Soil	VFYAVADDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVTVTGTAELAENAHRPLIDQAAFEEDWPPDVRTSIICLPLDAVEGFELRDS*
Ga0126310_100199374	3300010044	Serpentine Soil	LVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVPTSIICLPLTAIEGFELREQ*
Ga0126311_102436902	3300010045	Serpentine Soil	DIVHYAPGAEISLAVDGGTPAAHRETVTVTGTAELAESTHRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDP*
Ga0126306_102210302	3300010166	Serpentine Soil	VVLYAIAEDQILMRLPDYNDIVHYAPGCEVRLDVEGGTPAAHRETVIVTGTAELAEGAQRPLIDKAAFDEDWPSDVRTSVICLPVSAVEGFELRDP*
Ga0126306_103614032	3300010166	Serpentine Soil	VLRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGQAVIAENDQEPLIDQTALLEQWPPDVPTQVICVPLTAVEGFELRDP*
Ga0134128_117549752	3300010373	Terrestrial Soil	VSYAVAGDQILLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETGVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP*
Ga0138513_1000066912	3300011000	Soil	VVSYAVAGDQILVRLPDYNDIVHYAPGREVSLDVDGGTPAAHRETVVVTGKAALAESGQKPLIDQTAFQEEWPADVPTSIICVPLTAIEGFELRDP*
Ga0138514_1000412471	3300011003	Soil	LLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP*
Ga0157329_10114162	3300012491	Arabidopsis Rhizosphere	VVSYAVAGDQVLVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVTVTGTAELAETDKRPLIDQAAFQEDWPADVRTSVLCLPLNTVEGFELRDQ*
Ga0157300_10087912	3300012884	Soil	HEGRLGYQSGRGHRSVVVSYAVAGDQILVRVPDYNDIARYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENDHRPLIDQAAFEEDWPSDVRTSIICLPLNAVEGFELRDP*
Ga0157305_101847991	3300012891	Soil	LGYQSGRGHRSVVVSYAVAGDQILVRVPDYNDIARYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENEHRPLIDQAAFEEDWPSDVRTSIICLPLNAVEGFELRDP*
Ga0157296_102406272	3300012905	Soil	EDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVIVTGTAALADSGERPLIDQAAFEEDWPADVRTSVICLPLNTVEGFELRDP*
Ga0157283_101405551	3300012907	Soil	RRLGYQSGRGHRSVVVSYAVAGDQILVRVPDYNDIARYAPGAEISLAVDGGTPSAHRETVTVTSTAELAENEHRPLIDQAAFEEDLPSDVRTSIICLPLNAVEGFELRDP*
Ga0157301_100602361	3300012911	Soil	VHYAPGAEVSLDVDGGTPAAHRETVIVTGTAALADSGERPLIDQAAFEEDWPADVRTSVICLPLNTVEGFELRDP*
Ga0157302_100998562	3300012915	Soil	VAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAALADSGERPLIDQAAFRENWPADVPTSVICLPLNAVEGFELRDP*
Ga0162651_1000588621	3300012938	Soil	VVSYSVAEDQILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGRAALAGNGQNPLIDQTAFQEEWPADVPTSVICVPLTVIEGFELRDP*
Ga0162650_1000034442	3300012939	Soil	VVSYAVAGDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGKAALAESGQKPLIDQTAFQEEWPADVPTSIICVPLTAIEGFELRDP*
Ga0162652_1001075731	3300012941	Soil	VVVSYAVAGDQILVRLPDYNDIVNYAPGSEVSLDVDGGTPAAHRETVVVTGKAALAESGHKPLIDQTAFQEEWPPGVPTSIICVPLTAIEGFELRDP*
Ga0157377_113950452	3300014745	Miscanthus Rhizosphere	DIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP*
Ga0173483_103388711	3300015077	Soil	PDYNDIVHYAPGAEVSLDVDGGTPAAHRETVIVTGTAALADSGERPLIDQAAFEEDWPADVRTSVICLPLNTVEGFELRDP*
Ga0132258_110979301	3300015371	Arabidopsis Rhizosphere	MGYQSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVIVTGTAALAESGQRPMIDQAAFEEDWPPDVRTSVICPPLNTVEGFELRDP*
Ga0184634_100644733	3300018031	Groundwater Sediment	VRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGKAALAESGQKPLIGQTAFQEEWPPDVQTSIICVPLTAIEGFELRDP
Ga0184634_104832651	3300018031	Groundwater Sediment	DIVHYAPGAEVSLDVDGGTPPAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0184623_100610273	3300018056	Groundwater Sediment	HYAPGSEVSLDVDGGTPAAHRETVVVTGKAALAESGHKPLIDQTAFQEEWPPDVPTSIICVPLTAIEGFELRDP
Ga0184635_103024802	3300018072	Groundwater Sediment	GDQILVRLPDYNDIVHYAPGSDVSLDVDGGTPAAHRETVVVTGRAALAENNQKPLIDQTAFQEEWPPDITTSVICVPLTAIEGFELRDP
Ga0190269_114684931	3300018465	Soil	YQSGRGHRSVVVFYAVAGDQILVRLPDYNDIVRYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENTHRPLIDQAAFEEDWPSDVRTSVICLPLNPVEGFELRDP
Ga0190268_118753511	3300018466	Soil	RSVVVSYAIAEDQILMRLPDYNDIVHYAPGCEVRLDVDGGTPAAHRETVIVTGTAELADGAQRPLIDKAAFEEDWPSDVRTSIICLPVTAVEGFELRDP
Ga0190267_103710621	3300019767	Soil	VSYAVAEDQILLRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGQAALAGNGEEPLIDQAAFLEQWPPDVPTQVICVPLTAVEGFELRDP
Ga0190267_105582582	3300019767	Soil	DQILVRLPDYNDIVHYAPGAEVSLDVDGGSPAAHHETVIVTGTAVLADSAERPSIDQAVFAEDWPADVRTSVLCLPLNTVEGFELKDP
Ga0190267_106345052	3300019767	Soil	SYAVAGDHILVRLPDYNDIVHYAPGAEVSLDVEGGTPAAHRETVVVTGTAALADSGERPLIDQAAFQEDWPADVPTSVICLPLNAVEGFELRDP
Ga0190267_109653332	3300019767	Soil	YNDIVHYAPGSEVRLDVEGGTPAAHRETVVVTGKAALAEGGQKPLIDQTAFQEEWPPDVQTSIICVPLTAIEGFELRDP
Ga0193705_10203802	3300019869	Soil	DQILLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP
Ga0193741_10450041	3300019884	Soil	AEDQILLRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGQAALAGNGQEPLIDQTAFLEQWPPDVPTQVICLPLTAVEGFELRDP
Ga0193741_11299701	3300019884	Soil	AGDQILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGKAALAGSGQKPLIDQTAFQEEWPSDVLTSIICVPLTAIEGFELRDP
Ga0193738_10047958	3300020020	Soil	GDQILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGKAALAGSGQKPLIDQTAFQEEWPSDVLTSIICVPLTAIEGFELRDP
Ga0210381_1000038913	3300021078	Groundwater Sediment	VVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPPAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0222621_10059714	3300021510	Groundwater Sediment	LGYQSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0222625_13959391	3300022195	Groundwater Sediment	QILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGKAALAESGQKPLIDHTAFQEEWPPDVPTSIICVPLTAIEGFELRDS
Ga0222623_104181912	3300022694	Groundwater Sediment	SYAVAGDQILLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP
Ga0222622_109237661	3300022756	Groundwater Sediment	AVAEDQILLRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGKAALAGSGQEPLIDQTAFLEEWPPDVPTQVICVPVTAIEGFELRDP
Ga0247794_101800291	3300024055	Soil	EGRLGYQSGRGHRSVVVSYAVAEDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVIVTGTAALADSGERPLIDQAAFEEDWPADVRTSVICLPLNTVEGFELRDP
Ga0247794_103423352	3300024055	Soil	YNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAALADSGERPLIDQAAFQENWPADVPTSVICLPLNTVEGFELRDP
Ga0207642_105331932	3300025899	Miscanthus Rhizosphere	ILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0207688_102138751	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPPGVRTSVICLPLNTVEGFELRDS
Ga0207694_106257982	3300025924	Corn Rhizosphere	RLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0207677_117013631	3300026023	Miscanthus Rhizosphere	SYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAALAESGQRPLIDQAAFEEDWPPGVRTSVICLPLNTVEGFELRDR
Ga0207698_112635241	3300026142	Corn Rhizosphere	GRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0209382_104476541	3300027909	Populus Rhizosphere	PGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0268265_102783961	3300028380	Switchgrass Rhizosphere	HEGRLGYQSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0268265_111691772	3300028380	Switchgrass Rhizosphere	IVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP
Ga0268264_119835142	3300028381	Switchgrass Rhizosphere	GHRSVVVSYAVAGDQILLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP
Ga0307317_100258033	3300028720	Soil	VVSYAVAGDQILVRVPDYNDIARYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENDHRPLIDQAAFEEDWPSDVRTSIICLPLNAVEGFELRDP
Ga0307315_101578032	3300028721	Soil	VSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVEGGTPAAHRETVVVTGTAALADSGERPLIDQAAFQEDWPADVPTSVICLPLNAVEGFELRDP
Ga0307306_101995362	3300028782	Soil	RSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0307282_100139731	3300028784	Soil	GHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPPAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0307283_100265512	3300028790	Soil	MQGLDLQPSRGPAGIPIGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGATPAAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0307503_101007612	3300028802	Soil	SVVVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTAAVQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0307302_106328601	3300028814	Soil	ILMRLPDYNDIVHYAPGCEVRLDVDGGTPAAHRETVIVTGTAELADGAQRPLIDKAAFEEDWPSDVRTAIICLPVSAVEGFELRDP
Ga0308206_11586571	3300030903	Soil	EGRLGYQSGRGHRSVVVSYAVADDQILVRLPDYNDIVHYAPGCEVSLDVDGGTPAAHRETVVVTGKAALAESGQKPLIEQTAFQEEWPPDVQTSIICVPLTAIEGFELRDS
Ga0308198_10239581	3300030904	Soil	VVSYAVAGDQILVRLPDYNDIVHYAPGAEVSLDVDGGTPAAQRETVIVTGTAALADSGERPLIDQAAFAEDWPADVRTSVLCLPLNTVEGFELPDP
Ga0308199_10653171	3300031094	Soil	LLRVPDYNDIVHYAPGAEVSLDVDGGTPAAHRETVVVTGTAVLADSGERPLIDQAAFQENWPADVPTSVICLPLNAVEGFELRDP
Ga0307498_100105643	3300031170	Soil	APGAEVSLDVDGGTPAAHRETVIVTGTAALAESGQRPLIDQAAFEEDWPADVRTSVICLPLNTVEGFELRDP
Ga0307413_100856215	3300031824	Rhizosphere	SGKGPRSVVVSYAVAGDQILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGEAALADSGHKPLIDQTAFQEEWPPDVPTSIICLPLTAIEGFELREQ
Ga0310900_114285722	3300031908	Soil	YQSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0310885_105084952	3300031943	Soil	EGRLGYQSGRGHRSVVVSYAVAGDQILVRLPDYNDIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0307416_1004804871	3300032002	Rhizosphere	ILVRLPDYNDIVRYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENTHRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDP
Ga0307415_1007609311	3300032126	Rhizosphere	ILVRLPDYNDIVHYAPGAEISLAVDGGTPAAHRETVTVTGTAELAENTHRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDP
Ga0307472_1006157691	3300032205	Hardwood Forest Soil	DIVHYAPGAEISLDVDGGTPAAHRETVSVTGTAALAGSGQRPLIDQAAFEEDWPSDVRTSVICLPLNTVEGFELRDS
Ga0364937_009759_184_474	3300034113	Sediment	VVSYAVAEDLILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGRAALVEHGHKPLIDQTGFQEEWPPDVPTSVICVPLTAIEGFELRDP
Ga0364935_0150635_438_728	3300034151	Sediment	VVSYAVAEDLILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGRAALAEHGHKPLIDQTAFQEEWPPDVPTSVICVPLTAIEGFELRDP
Ga0364923_0007680_1823_2113	3300034690	Sediment	VVSYAVAEDLILVRLPDYNDIVHYAPGSEVSLDVDGGTPAAHRETVVVTGRAALAEHGHKPLIDQTGFQEEWPPDVPTSVICVPLTAIEGFELRDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081512

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences