Metagenome / Metatranscriptome Family F081465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	54 residues
Representative Sequence	EFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP
Number of Associated Samples	105
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.41 %
% of genes near scaffold ends (potentially truncated)	78.95 %
% of genes from short scaffolds (< 2000 bps)	82.46 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.491 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.526 % of family members)
Environment Ontology (ENVO)	Unclassified (27.193 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.22% Coil/Unstructured: 77.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13620	CarboxypepD_reg	7.02
PF13483	Lactamase_B_3	7.02
PF02416	TatA_B_E	3.51
PF13360	PQQ_2	2.63
PF06253	MTTB	2.63
PF14376	Haem_bd	1.75
PF07995	GSDH	1.75
PF02954	HTH_8	1.75
PF00011	HSP20	1.75
PF03572	Peptidase_S41	1.75
PF03483	B3_4	1.75
PF00871	Acetate_kinase	0.88
PF02770	Acyl-CoA_dh_M	0.88
PF01261	AP_endonuc_2	0.88
PF00990	GGDEF	0.88
PF14534	DUF4440	0.88
PF00694	Aconitase_C	0.88
PF07638	Sigma70_ECF	0.88
PF02518	HATPase_c	0.88
PF00753	Lactamase_B	0.88
PF13240	zinc_ribbon_2	0.88
PF07637	PSD5	0.88
PF07690	MFS_1	0.88
PF01568	Molydop_binding	0.88
PF00441	Acyl-CoA_dh_1	0.88
PF12867	DinB_2	0.88
PF03009	GDPD	0.88
PF01042	Ribonuc_L-PSP	0.88
PF07152	YaeQ	0.88
PF00585	Thr_dehydrat_C	0.88
PF00501	AMP-binding	0.88
PF01063	Aminotran_4	0.88
PF07452	CHRD	0.88
PF00795	CN_hydrolase	0.88
PF14492	EFG_III	0.88
PF00034	Cytochrom_C	0.88
PF00154	RecA	0.88
PF13510	Fer2_4	0.88
PF03279	Lip_A_acyltrans	0.88
PF00392	GntR	0.88
PF08308	PEGA	0.88
PF07987	DUF1775	0.88
PF07731	Cu-oxidase_2	0.88
PF00672	HAMP	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	3.51
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	2.63
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.75
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.75
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.75
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	1.75
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.75
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.88
COG1171	Threonine deaminase	Amino acid transport and metabolism [E]	0.88
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.88
COG0282	Acetate kinase	Energy production and conversion [C]	0.88
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.88
COG3426	Butyrate kinase	Energy production and conversion [C]	0.88
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.88
COG4549	Uncharacterized conserved protein YcnI, contains cohesin/reeler-like domain	Function unknown [S]	0.88
COG4681	Uncharacterized conserved protein YaeQ, suppresses RfaH defect	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.49 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.49 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.49 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.02 %
Unclassified	root	N/A	3.51 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	29.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.89 %
Unclassified	root	N/A	3.51 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.82 %
Unclassified	root	N/A	3.51 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.75 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.75 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.75 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.82 %
Unclassified	root	N/A	3.51 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.75 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.75 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.88 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.82 %
Unclassified	root	N/A	3.51 %
Staphylococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae	1.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.75 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.88 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.88 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.82 %
Unclassified	root	N/A	3.51 %
Staphylococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus	1.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.75 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.88 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.82 %
Unclassified	root	N/A	3.51 %
unclassified Staphylococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → unclassified Staphylococcus	1.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.75 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.88 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.82 %
Unclassified	root	N/A	3.51 %
Staphylococcus sp. E463	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → unclassified Staphylococcus → Staphylococcus sp. E463	1.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.75 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.88 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101222847	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300004803\|Ga0058862_12048173	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005180\|Ga0066685_10711088	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005290\|Ga0065712_10600396	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005329\|Ga0070683_100787366	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005332\|Ga0066388_102297052	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005332\|Ga0066388_108626847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → unclassified Staphylococcus → Staphylococcus sp. E463	507	Open in IMG/M
3300005334\|Ga0068869_101008423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300005335\|Ga0070666_10197350	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300005336\|Ga0070680_100026230	All Organisms → cellular organisms → Bacteria → Proteobacteria	4660	Open in IMG/M
3300005434\|Ga0070709_11580040	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005439\|Ga0070711_100238443	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300005439\|Ga0070711_101363697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → unclassified Staphylococcus → Staphylococcus sp. E463	616	Open in IMG/M
3300005446\|Ga0066686_10965475	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300005450\|Ga0066682_10746149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005466\|Ga0070685_11181778	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005524\|Ga0070737_10000882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	51807	Open in IMG/M
3300005538\|Ga0070731_11184733	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005553\|Ga0066695_10761924	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300005564\|Ga0070664_101790722	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005577\|Ga0068857_100003848	All Organisms → cellular organisms → Bacteria → Proteobacteria	12629	Open in IMG/M
3300005598\|Ga0066706_11497402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005618\|Ga0068864_100735965	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005842\|Ga0068858_101518693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300006034\|Ga0066656_10517369	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300006162\|Ga0075030_101290762	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300006237\|Ga0097621_101930540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300006358\|Ga0068871_100398815	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006755\|Ga0079222_11067392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300006796\|Ga0066665_11175624	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006893\|Ga0073928_10016892	All Organisms → cellular organisms → Bacteria	7795	Open in IMG/M
3300006914\|Ga0075436_101572947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300007258\|Ga0099793_10064318	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300009098\|Ga0105245_10501576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300009137\|Ga0066709_103962456	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300009176\|Ga0105242_10999535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300009523\|Ga0116221_1017223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3904	Open in IMG/M
3300010358\|Ga0126370_12336503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	530	Open in IMG/M
3300010360\|Ga0126372_12989200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010362\|Ga0126377_11840112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	681	Open in IMG/M
3300010366\|Ga0126379_12618113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300010376\|Ga0126381_101562002	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300010396\|Ga0134126_10484352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300010398\|Ga0126383_10240470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1769	Open in IMG/M
3300010398\|Ga0126383_10248344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1744	Open in IMG/M
3300010398\|Ga0126383_11160627	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300010398\|Ga0126383_12468624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300011119\|Ga0105246_12073256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300011120\|Ga0150983_12537499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012199\|Ga0137383_10773320	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012202\|Ga0137363_11815741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012357\|Ga0137384_10524195	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012918\|Ga0137396_10536386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300012922\|Ga0137394_11224469	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300012971\|Ga0126369_10262161	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300013105\|Ga0157369_12153305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300013105\|Ga0157369_12303381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300013306\|Ga0163162_11211657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300014325\|Ga0163163_10701703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300014501\|Ga0182024_12771689	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300014745\|Ga0157377_11324110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300014969\|Ga0157376_10749578	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300015371\|Ga0132258_12803572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300015374\|Ga0132255_101092382	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300015374\|Ga0132255_105005724	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300016270\|Ga0182036_10221360	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300016341\|Ga0182035_11776379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	558	Open in IMG/M
3300016357\|Ga0182032_11924977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	518	Open in IMG/M
3300017659\|Ga0134083_10018942	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300017942\|Ga0187808_10179306	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300018468\|Ga0066662_11241238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300019789\|Ga0137408_1402300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2780	Open in IMG/M
3300020034\|Ga0193753_10188004	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300021046\|Ga0215015_10887513	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300021168\|Ga0210406_10009415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9710	Open in IMG/M
3300021362\|Ga0213882_10004569	All Organisms → cellular organisms → Bacteria	4771	Open in IMG/M
3300021560\|Ga0126371_10855925	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300021560\|Ga0126371_12256361	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300022467\|Ga0224712_10246228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300022557\|Ga0212123_10000056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	355120	Open in IMG/M
3300025903\|Ga0207680_10109598	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300025912\|Ga0207707_10079426	All Organisms → cellular organisms → Bacteria	2864	Open in IMG/M
3300025915\|Ga0207693_10982025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300025917\|Ga0207660_10103214	All Organisms → cellular organisms → Bacteria → Proteobacteria	2133	Open in IMG/M
3300025944\|Ga0207661_11808031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025945\|Ga0207679_11972280	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300026075\|Ga0207708_10453926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300026078\|Ga0207702_10477816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300026116\|Ga0207674_10007236	All Organisms → cellular organisms → Bacteria	12949	Open in IMG/M
3300026296\|Ga0209235_1221589	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300027842\|Ga0209580_10211004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	964	Open in IMG/M
3300027854\|Ga0209517_10048859	All Organisms → cellular organisms → Bacteria → Proteobacteria	3222	Open in IMG/M
3300027869\|Ga0209579_10796395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300027968\|Ga0209061_1000916	All Organisms → cellular organisms → Bacteria → Acidobacteria	58053	Open in IMG/M
3300029951\|Ga0311371_11488511	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300030114\|Ga0311333_10661211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300031234\|Ga0302325_10161418	All Organisms → cellular organisms → Bacteria	3974	Open in IMG/M
3300031521\|Ga0311364_10386744	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031561\|Ga0318528_10476295	Not Available	670	Open in IMG/M
3300031708\|Ga0310686_103117356	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031708\|Ga0310686_111205959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2582	Open in IMG/M
3300031713\|Ga0318496_10146432	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300031718\|Ga0307474_10375795	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031782\|Ga0318552_10050361	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300031819\|Ga0318568_10158933	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300031879\|Ga0306919_11061976	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031942\|Ga0310916_10551047	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300031946\|Ga0310910_11396592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300032180\|Ga0307471_101267321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300032261\|Ga0306920_104189267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300034820\|Ga0373959_0138180	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.44%
Host-Associated	Host-Associated	24.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.05%
Plants	Host-Associated → Plants	23.68%
Aquatic	Environmental → Aquatic	4.39%
Human	Host-Associated → Human	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.65%
Peat	Environmental → Terrestrial → Peat	3.51%
Roots	Host-Associated → Plants → Roots	2.63%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.75%
Sediment	Environmental → Aquatic → Sediment	0.88%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.88%
Digestive System	Host-Associated → Human → Digestive System	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.63%
Loam	Environmental → Terrestrial → Soil → Loam	13.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.51%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.88%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.51%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.88%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.88%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.88%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.88%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1012228472	3300004152	Bog Forest Soil	VEFGMLGINPKEGSSLVWKFVQYYDNGTKEEFTGPIGSKYPSPVVTLRTPESTK*
Ga0058862_120481731	3300004803	Host-Associated	PYEFVEFGMLGINPKEGTELVWKFVQYYDDGMKEEFTGPVGSRLPAPVVALKAPAGK*
Ga0066685_107110882	3300005180	Soil	QPYEFVEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP*
Ga0065712_106003961	3300005290	Miscanthus Rhizosphere	QPYEFVEFGMLAINPKEATNLVWKFTQYYDNGTKEEFTGPVGAKAPLLPAPVVTLKPAVTP*
Ga0070683_1007873661	3300005329	Corn Rhizosphere	GMLGINPKQGDTLTWKFVQYYADGKKEEFTGPVGTFYPAPTVKLKPAPVEAGK*
Ga0066388_1022970523	3300005332	Tropical Forest Soil	VEFGMLAINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRLPAPVVTLKPAAPAP*
Ga0066388_1086268471	3300005332	Tropical Forest Soil	FGMLAINPKQGANLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVTLKPAAPTP*
Ga0068869_1010084231	3300005334	Miscanthus Rhizosphere	INPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAAAGK*
Ga0070666_101973501	3300005335	Switchgrass Rhizosphere	AINPKEGTDLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVTLKAAPAK*
Ga0070680_1000262301	3300005336	Corn Rhizosphere	KQGDTLTWKFVQYYADGKKEEFTGPVGTFYPSPTVKLKPAPVDAGK*
Ga0070709_115800402	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GLNAKEGSDLVWKFVQYYDDGTKEEFTGPAGSRLPSPVTTLKKSDAPR*
Ga0070711_1002384431	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GLNPKEGAELVWKFVQYYEDGSKEEFTGPVGSRLPSPVTALKAASPAK*
Ga0070711_1013636971	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EFGMLGLNPKEGASLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTTLKKAD*
Ga0066686_109654752	3300005446	Soil	FVEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP*
Ga0066682_107461491	3300005450	Soil	EFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP*
Ga0070685_111817781	3300005466	Switchgrass Rhizosphere	FVEFGMLAINPKEATNLVWKFTQYYDNGTKEEFTGPVGAKAPLLPAPVVTLKPAVTP*
Ga0070737_1000088227	3300005524	Surface Soil	MAPYEFVEFGMLGINPKEGSSLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTTLKKAGQ*
Ga0070731_111847332	3300005538	Surface Soil	MLGINPKEGSDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVTKLKKAEPSASQ*
Ga0066695_107619241	3300005553	Soil	EFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPAPVVTLKPAPPAP*
Ga0070664_1017907222	3300005564	Corn Rhizosphere	GINPKESTDLVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAAAGK*
Ga0068857_1000038483	3300005577	Corn Rhizosphere	MQPYEFVEFGMLGINPKETTDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKPPAGK*
Ga0066706_114974022	3300005598	Soil	GKIQPYEFVEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVTLKPATPAP*
Ga0068864_1007359651	3300005618	Switchgrass Rhizosphere	MLAINPKEATNLVWKFTQYYDNGTKEEFTGPVGAKAPLLPAPVVTLKPAVTP*
Ga0066903_1047416022	3300005764	Tropical Forest Soil	GKIQPYEFVEFGMLAINPKQGANLTWKFIQYYDDGTKEEFVGPAGSRLPAPVVTLKPAAPAP*
Ga0068858_1015186931	3300005842	Switchgrass Rhizosphere	EFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPTGSRLPSPVVTLKAAASK*
Ga0066656_105173692	3300006034	Soil	GKLQPYEFVEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP*
Ga0075030_1012907621	3300006162	Watersheds	NPKEGASLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTVLKKAD*
Ga0097621_1019305402	3300006237	Miscanthus Rhizosphere	EFVEFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAGAGK*
Ga0068871_1003988153	3300006358	Miscanthus Rhizosphere	EFVEFGMLAINPKEATNLVWKFTQYYDNGTKEEFTGPVGAKAPLLPAPVVTLKPAVTP*
Ga0079222_110673921	3300006755	Agricultural Soil	MLGINPKQGSNLTWKFIQYYDDGTKEEFTGAAGSRLPAPVVTLKPASTAP*
Ga0066665_111756242	3300006796	Soil	FGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP*
Ga0073928_1001689211	3300006893	Iron-Sulfur Acid Spring	MLGLNPKDGSSLTWKFVQYYEDGMKEEFTGPVGSRYPAPVVTLKKIETSTK*
Ga0075436_1015729471	3300006914	Populus Rhizosphere	PYEFVEFGMLGINPKEGTELVWKFVQYYEDGTKEEFTGPTGSRLPAPVVTLKAAAAK*
Ga0099793_100643183	3300007258	Vadose Zone Soil	MLGINPKQGTNLTWKFIQFYDDGTKEEFVGPVGSRLPAPVVALKPATP*
Ga0066710_1020834191	3300009012	Grasslands Soil	TGKLQPYEFVEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP
Ga0105245_105015762	3300009098	Miscanthus Rhizosphere	MLGINPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAGAGK*
Ga0066709_1039624561	3300009137	Grasslands Soil	EFVEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPSPVVTLKPAAPAP*
Ga0105242_109995352	3300009176	Miscanthus Rhizosphere	YEFVEFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAAAGK*
Ga0116221_10172231	3300009523	Peatlands Soil	MQQYEFVEFGMLAINPKEATDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKPAPGK*
Ga0126370_123365031	3300010358	Tropical Forest Soil	GKIQPYEFVEFGMLAINPKQGSNLTWKFVQYYDDGTKEEFVGAAGSKLPAPVVTLKAAPAQ*
Ga0126372_129892001	3300010360	Tropical Forest Soil	GKIQPYEFVEFGMLAINPKQGANLTWKFIQYYDDGTKEEFTGPAGSRLPSPIVTLKPAPAAP*
Ga0126377_118401122	3300010362	Tropical Forest Soil	MMPYEFVEFGMLGINPKEATDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKPSQGK*
Ga0126379_126181131	3300010366	Tropical Forest Soil	KIQPYEFVEFGMLAINPKQGSNLTWKFVQYYDDGTKEEFVGAAGSKLPAPVVTLKAAPAQ
Ga0126381_1015620022	3300010376	Tropical Forest Soil	FVEFGMLAINPKQGENLTWKFVQYYDDGTKEEFVGPAGSRLPAPVVTLKPAAPAP*
Ga0134126_104843524	3300010396	Terrestrial Soil	GINPKQGDTLTWKFVQYYADGKKEEFTGPVGTFYPSPTVRLKPAPVDAGK*
Ga0126383_102404703	3300010398	Tropical Forest Soil	KIQPYEFVEFGMLAINPKQGENLTWKFVQYYDDGTKEEFVGPTGSRLPAPVVTLKPAAPAP*
Ga0126383_102483441	3300010398	Tropical Forest Soil	KIQPYEFVEFEMLTINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVSLKPTTSAP*
Ga0126383_111606271	3300010398	Tropical Forest Soil	IQPYEFVEFGMLGINPKQGTNLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVTLKSAPPAN
Ga0126383_124686242	3300010398	Tropical Forest Soil	AINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVSLKPATPAP*
Ga0105246_120732561	3300011119	Miscanthus Rhizosphere	KMMPYEFVEFGMLGINPKEATDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKAAQGK
Ga0150983_125374991	3300011120	Forest Soil	PKEGSNLVWKFVQYYEDGMKEEFTGPIGSRYPSPVVTLKTVETSTK*
Ga0137383_107733201	3300012199	Vadose Zone Soil	MLGINPKEGTSFVWKFVQYYEDGSKEEFTGPVGSRLPSPVTTLKKPDPTVSASK*
Ga0137363_118157411	3300012202	Vadose Zone Soil	IQPYEFVEFGMLAINPKQGSNLTWKFIQYYDDGTKEEFTGPAGSRLPAPVVSLKPAAPAP
Ga0137384_105241952	3300012357	Vadose Zone Soil	MLGINQKEGTSFVWKFVQYYEDGSKEEFTGPVGSRLPSPVTTLKKPDPTVSASK*
Ga0137396_105363863	3300012918	Vadose Zone Soil	GINPKQGSNLTWKFIQYYDDGTKEEFVGPVGSRLPAPVVALKPAPPAP*
Ga0137394_112244691	3300012922	Vadose Zone Soil	MLGLNDKESSSLVWKFVQHYEDGTTEEFTGPPGARLPSPVTTLLPAKRAEKP*
Ga0126369_102621612	3300012971	Tropical Forest Soil	MLGINPKEGSNLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTTLKPAEPAASR*
Ga0157369_121533051	3300013105	Corn Rhizosphere	YEFVEFGMLGINPKEATDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKPPAGK*
Ga0157369_123033812	3300013105	Corn Rhizosphere	VEFGMLGLNPKEGASLTWKFVQYYDDGTKEEFTGPVGSRLPAPVVTLK*
Ga0163162_112116572	3300013306	Switchgrass Rhizosphere	EFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPTGSRLPAPVVTLKAAAAK*
Ga0163163_107017032	3300014325	Switchgrass Rhizosphere	FGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAGAGK*
Ga0182024_127716891	3300014501	Permafrost	MLGINPKEGDSLVWKFVQYYEDGSKEEFTGPVGSRLPSPVTTLKKPELPVSASK*
Ga0157377_113241101	3300014745	Miscanthus Rhizosphere	GINPKEGTELVWKFVQYYDDGTKEEFTGPTGSRLPSPVVTLKAAASK*
Ga0157376_107495782	3300014969	Miscanthus Rhizosphere	LGINPKEGTDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKTPAGK*
Ga0132258_128035721	3300015371	Arabidopsis Rhizosphere	IQPYEFVEFGMLAINPKEGSNLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVSLKAAATAQ
Ga0132255_1010923821	3300015374	Arabidopsis Rhizosphere	IQPYEFVEFGMLAINPKEGSNLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVSLKAAAPAQ
Ga0132255_1050057241	3300015374	Arabidopsis Rhizosphere	MLAINPKEETNLIWKFTQYYDNGTKEEFTGPVGAKAPLLPAPVVTLKPAATP*
Ga0182036_102213603	3300016270	Soil	MAPYEFVEFGMLGINPKEGSNLVWKFVQYYDDGSNEEFTGPVGSRLPSPVTTLKKVEP
Ga0182035_117763791	3300016341	Soil	GINPKEGANLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTVLKKAAQ
Ga0182032_119249771	3300016357	Soil	EFVEFGMLGLNPKEGQAKELVWKFVQFYEDGSKEEFTGPVGSRLPSPVVALK
Ga0134083_100189423	3300017659	Grasslands Soil	MLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPAPVVTLKPAPPAP
Ga0187808_101793061	3300017942	Freshwater Sediment	FGMLGINPKEGTSTLVWKFWQYYEGGTKEEFIGPVGSFYPSPVVTLKAPPPPASTK
Ga0066662_112412383	3300018468	Grasslands Soil	EFGMLGLNDKDSSSLVWRFVQYYDDGTKEEFTGAPGSRLPSPVTALAPAKKAP
Ga0137408_14023004	3300019789	Vadose Zone Soil	MLGINPKQGTNLTWKFIQFYDDGTREEFVGPVGSRLPAPVVALKPATP
Ga0193753_101880042	3300020034	Soil	MLGVNPKQSEPLVWKFVQFYADGKKEEFVGAVGSAFPSPTVTLKSAAAEVAR
Ga0215015_108875131	3300021046	Soil	ISSAASDVYKRQGLLGLNPKEGTSLTWKFVQFYEDGMKEEFTGPVGSRYPSPVVTLKKIETSTK
Ga0210406_100094152	3300021168	Soil	MLGLNPKDGSSLTWKFVPYYADGMKEEFTGPVDSRYPVTVVT
Ga0213882_100045694	3300021362	Exposed Rock	MLGLNPKEGQGKELVWKFVQFYEDGSKEEFTGPVGSRLPSPVVTLK
Ga0126371_108559251	3300021560	Tropical Forest Soil	KIQPYEFVEFGMLAINPKQGANLTWKFIQYYDDGTKEEFVGPAGSRLPAPVVTLKPAPPA
Ga0126371_122563611	3300021560	Tropical Forest Soil	LGINPKEEKDLVWRFVQYYDDGTTEEFTGPVGSRLPSPVTTLKKAAPAPGSK
Ga0224712_102462282	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	GINPKQGDTLTWKFVQYYADGKKEEFTGPVGTFYPSPTVKLKPAPVDAGK
Ga0212123_10000056111	3300022557	Iron-Sulfur Acid Spring	MLGLNPKDGSSLTWKFVQYYEDGMKEEFTGPVGSRYPAPVVTLKKIETSTK
Ga0207680_101095981	3300025903	Switchgrass Rhizosphere	MLAINPKEGTDLTWKFIQYYDDGTKEEFTGPVGSRLPSPVVTLKAAPAK
Ga0207707_100794264	3300025912	Corn Rhizosphere	QGDTLVWKFVQYYADGKKEEFTGPAGTFYPSPTVRLKPAPVGAGK
Ga0207693_109820252	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VPYEFVEFGLLGLNPKEGASLTWKFVQFYEDGMKEEFTGPVGSRYPSPVVTLKKIETSTK
Ga0207660_101032143	3300025917	Corn Rhizosphere	LGINPKQGDTLTWKFVQYYADGKKEEFTGPVGTFYPSPTVKLKPAPVDAGK
Ga0207661_118080312	3300025944	Corn Rhizosphere	EFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGAAGSRLPSPVVTLKAAAGK
Ga0207679_119722801	3300025945	Corn Rhizosphere	GINPKESTDLVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAAAGK
Ga0207708_104539262	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MMPYEFVEFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAGAGK
Ga0207702_104778161	3300026078	Corn Rhizosphere	VEFGMLGINPKEGTELVWKFVQYYDDGTKEEFTGPAGSRLPSPVVTLKAGAGK
Ga0207674_100072363	3300026116	Corn Rhizosphere	MQPYEFVEFGMLGINPKETTDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVVTLKPPAGK
Ga0209235_12215891	3300026296	Grasslands Soil	PYEFAEFGMLGINPKQGSNLTWKFIQYYDDGTKEEFTGPVGSRYPAPVVTLKPAPVAP
Ga0209580_102110043	3300027842	Surface Soil	APYEFVEFGMLGLNPKEGSELVWKFVQFYEDGSKEEFTGPVGSRLPSPVTTLKKAD
Ga0209517_100488591	3300027854	Peatlands Soil	ATWTGKIVPYEFVEFGMPGINPKEGTSLVWKFVQFYEDGSKEEFTGPVGSRLPSP
Ga0209579_107963952	3300027869	Surface Soil	GMLGINPKEGSDLVWKFVQYYDDGTKEEFTGPVGSRLPSPVTKLKKAEPSASQ
Ga0209061_100091635	3300027968	Surface Soil	MAPYEFVEFGMLGINPKEGSSLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTTLKKAGQ
Ga0311371_114885112	3300029951	Palsa	LGINPKEETNLVWKFVQYYEDGTKEEFTGPVGSFRPSPVTVLKKPEATATGSK
Ga0311333_106612112	3300030114	Fen	VEFGMLGLNPKQAEPLVWKFVQYYADGNKEEFTGPVGSPLPSPVVTLKSPPAEAAH
Ga0302325_101614181	3300031234	Palsa	INPKEETNPVWKFVQYYEDGTKEEFTGPVGSFRPSPVTVLKKPEATATGSK
Ga0311364_103867441	3300031521	Fen	GLNPKQAEPLVWKFVQYYADGNKEEFTGPVGSPLPSPVVTLKSLPAEAAH
Ga0318528_104762951	3300031561	Soil	PYEFVEFGMLGINPKEGSNLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTTLKPAEPAASR
Ga0310686_1031173561	3300031708	Soil	EFVEFGMLGLNPKEGASLTWKFVQYYEDGMKEEFTGPVGSRYPAPVVTLKKIETSTQ
Ga0310686_1112059594	3300031708	Soil	MPYEFVEFGMLGINPKEGTDLVWKFIQYYDDGTKEEFTGPVGSRLPSPVVTLKPAGK
Ga0318496_101464321	3300031713	Soil	IAPYEFVEFGMLGINPQQGDTLVWKFVQYYADGNKEEFTGPVGSFYPAPTVALKPAPAAH
Ga0307474_103757951	3300031718	Hardwood Forest Soil	VEFGMLGLNPKEGSSLTWKFVQYYEDGMKEEFTGPVGSRYPAPVVALRKIETSTK
Ga0318552_100503611	3300031782	Soil	PKEGSNLVWKFVQYYDDGSKEEFTGPVGSRLPSPVTTLKPAEPAASR
Ga0318568_101589331	3300031819	Soil	FGMLGINPQQGDTLVWKFVQYYADGNKEEFTGPVGSFYPAPTVALKPAPAAH
Ga0306919_110619762	3300031879	Soil	NPQQGDTLVWKFVQYYADGNKEEFTGPVGSFYPAPTVALKPAPAAH
Ga0306923_111640882	3300031910	Soil	WTGTVHPYEFVEFGMLGINPKEGQTKELVWKFVQFYADGSKEEFTGPVGSRYPSPVVTLK
Ga0310916_105510471	3300031942	Soil	RIMPYEFVEFGMLAVNPIDGKVLAWRFVQFYEDGSKEEFTGPAGSRFPSPMVELKASGR
Ga0310910_113965921	3300031946	Soil	GINPKQGSNLTWKFIQYYDDGTKEEFVGPVGSRLPAPVVTLKPATTAP
Ga0307471_1012673211	3300032180	Hardwood Forest Soil	LGLNPKEGASLTWKFVQFYEDGMKEEFTGPLGSRYPSPVVTLKKIETSTK
Ga0306920_1041892672	3300032261	Soil	MLGINPKEGSNLTWKFIQYYDDGTKEEFVGAVGSRLPAPVVTLKPAPTVP
Ga0373959_0138180_19_171	3300034820	Rhizosphere Soil	MLGINPKQGANLTWKFIQYYDDGTKEEFTGPVGSRLPAPVVTLKPVAPAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences