NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F081439

Metagenome Family F081439

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081439
Family Type Metagenome
Number of Sequences 114
Average Sequence Length 66 residues
Representative Sequence IRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSNEESESESKDMTVKLSLSSHKKSDQDSTS
Number of Associated Samples 73
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.88 %
% of genes near scaffold ends (potentially truncated) 88.60 %
% of genes from short scaffolds (< 2000 bps) 95.61 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.825 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(50.877 % of family members)
Environment Ontology (ENVO) Unclassified
(94.737 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(73.684 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Mixed Signal Peptide: No Secondary Structure distribution: α-helix: 54.26%    β-sheet: 0.00%    Coil/Unstructured: 45.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF00856SET 0.88



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.82 %
All OrganismsrootAll Organisms20.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001723|JGI24661J20069_1011047All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300001731|JGI24514J20073_1013280Not Available832Open in IMG/M
3300001735|JGI24520J20079_1005195Not Available768Open in IMG/M
3300001743|JGI24515J20084_1013177All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300002511|JGI25131J35506_1027486All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300002511|JGI25131J35506_1036555All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300002511|JGI25131J35506_1050670All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300002511|JGI25131J35506_1061324All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300002511|JGI25131J35506_1065215All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300002518|JGI25134J35505_10053138All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300002760|JGI25136J39404_1010674Not Available1629Open in IMG/M
3300002760|JGI25136J39404_1013008Not Available1488Open in IMG/M
3300002760|JGI25136J39404_1034206Not Available935Open in IMG/M
3300002760|JGI25136J39404_1046514Not Available803Open in IMG/M
3300002760|JGI25136J39404_1085913All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300003690|PicViral_1006847All Organisms → cellular organisms → Bacteria6103Open in IMG/M
3300006013|Ga0066382_10299345Not Available553Open in IMG/M
3300006076|Ga0081592_1208056Not Available621Open in IMG/M
3300006308|Ga0068470_1183959Not Available1120Open in IMG/M
3300006310|Ga0068471_1428292Not Available2997Open in IMG/M
3300006313|Ga0068472_10692467Not Available1017Open in IMG/M
3300006316|Ga0068473_1333988Not Available677Open in IMG/M
3300006326|Ga0068477_1442538Not Available626Open in IMG/M
3300006330|Ga0068483_1375400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium564Open in IMG/M
3300006336|Ga0068502_1424017Not Available1061Open in IMG/M
3300006338|Ga0068482_1597836Not Available680Open in IMG/M
3300006338|Ga0068482_1684662Not Available564Open in IMG/M
3300006340|Ga0068503_10449191Not Available926Open in IMG/M
3300006340|Ga0068503_10494711Not Available1612Open in IMG/M
3300006340|Ga0068503_10597155Not Available631Open in IMG/M
3300006341|Ga0068493_10620811Not Available1132Open in IMG/M
3300006347|Ga0099697_1403440All Organisms → cellular organisms → Eukaryota539Open in IMG/M
3300006738|Ga0098035_1115172Not Available929Open in IMG/M
3300006750|Ga0098058_1055889Not Available1106Open in IMG/M
3300006753|Ga0098039_1059024Not Available1336Open in IMG/M
3300006753|Ga0098039_1261025Not Available581Open in IMG/M
3300006754|Ga0098044_1215346Not Available752Open in IMG/M
3300006768|Ga0098071_117093Not Available628Open in IMG/M
3300006927|Ga0098034_1120051Not Available748Open in IMG/M
3300008218|Ga0114904_1126423Not Available608Open in IMG/M
3300009139|Ga0114949_11111890Not Available631Open in IMG/M
3300009139|Ga0114949_11583988Not Available523Open in IMG/M
3300009173|Ga0114996_10898677Not Available635Open in IMG/M
3300009595|Ga0105214_108026Not Available703Open in IMG/M
3300009786|Ga0114999_11236038All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium531Open in IMG/M
3300010151|Ga0098061_1010893All Organisms → cellular organisms → Bacteria3924Open in IMG/M
3300010155|Ga0098047_10179374Not Available815Open in IMG/M
3300010155|Ga0098047_10248156Not Available676Open in IMG/M
3300011013|Ga0114934_10438094Not Available580Open in IMG/M
3300017703|Ga0181367_1091482Not Available523Open in IMG/M
3300017775|Ga0181432_1121068All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria791Open in IMG/M
3300017775|Ga0181432_1284021All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria524Open in IMG/M
3300021443|Ga0206681_10372905All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria551Open in IMG/M
3300021792|Ga0226836_10811034Not Available529Open in IMG/M
3300025029|Ga0207900_115394Not Available638Open in IMG/M
3300025042|Ga0207889_1028126Not Available530Open in IMG/M
3300025047|Ga0207897_131394Not Available526Open in IMG/M
3300025047|Ga0207897_132814Not Available510Open in IMG/M
3300025049|Ga0207898_1025964Not Available743Open in IMG/M
3300025049|Ga0207898_1027493Not Available721Open in IMG/M
3300025052|Ga0207906_1009248Not Available1393Open in IMG/M
3300025052|Ga0207906_1020379Not Available921Open in IMG/M
3300025052|Ga0207906_1036739Not Available669Open in IMG/M
3300025069|Ga0207887_1068860Not Available578Open in IMG/M
3300025097|Ga0208010_1066492Not Available777Open in IMG/M
3300025118|Ga0208790_1172405Not Available586Open in IMG/M
3300025125|Ga0209644_1038015Not Available1083Open in IMG/M
3300025125|Ga0209644_1051466Not Available942Open in IMG/M
3300025125|Ga0209644_1074529Not Available792Open in IMG/M
3300025125|Ga0209644_1078442Not Available773Open in IMG/M
3300025125|Ga0209644_1105022Not Available669Open in IMG/M
3300025125|Ga0209644_1123476Not Available617Open in IMG/M
3300025125|Ga0209644_1125399Not Available612Open in IMG/M
3300025125|Ga0209644_1171853All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon516Open in IMG/M
3300025131|Ga0209128_1084604Not Available1056Open in IMG/M
3300025141|Ga0209756_1045470All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2195Open in IMG/M
3300025218|Ga0207882_1051376Not Available568Open in IMG/M
3300025244|Ga0207908_1015305Not Available1050Open in IMG/M
3300025248|Ga0207904_1072659Not Available560Open in IMG/M
3300025278|Ga0207417_1053924Not Available633Open in IMG/M
3300025873|Ga0209757_10066303Not Available1076Open in IMG/M
3300025873|Ga0209757_10084265Not Available962Open in IMG/M
3300025873|Ga0209757_10084937Not Available958Open in IMG/M
3300025873|Ga0209757_10122089Not Available806Open in IMG/M
3300025873|Ga0209757_10186403Not Available655Open in IMG/M
3300025873|Ga0209757_10280486Not Available530Open in IMG/M
3300026103|Ga0208451_1044566Not Available548Open in IMG/M
(restricted) 3300027856|Ga0255054_10344156Not Available726Open in IMG/M
(restricted) 3300027868|Ga0255053_10421409Not Available646Open in IMG/M
(restricted) 3300027881|Ga0255055_10148892All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1283Open in IMG/M
3300028022|Ga0256382_1101884Not Available689Open in IMG/M
3300031606|Ga0302119_10392288Not Available504Open in IMG/M
3300031801|Ga0310121_10399781Not Available780Open in IMG/M
3300031802|Ga0310123_10246553Not Available1190Open in IMG/M
3300031811|Ga0310125_10178062Not Available1096Open in IMG/M
3300032006|Ga0310344_11108419Not Available660Open in IMG/M
3300032006|Ga0310344_11288966Not Available603Open in IMG/M
3300032360|Ga0315334_10801346Not Available816Open in IMG/M
3300033742|Ga0314858_196196Not Available518Open in IMG/M
3300034628|Ga0326755_004968All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1263Open in IMG/M
3300034629|Ga0326756_016747All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium849Open in IMG/M
3300034629|Ga0326756_020741Not Available769Open in IMG/M
3300034654|Ga0326741_032432Not Available906Open in IMG/M
3300034654|Ga0326741_047636Not Available728Open in IMG/M
3300034654|Ga0326741_055423Not Available667Open in IMG/M
3300034655|Ga0326746_012820Not Available797Open in IMG/M
3300034655|Ga0326746_017769Not Available699Open in IMG/M
3300034655|Ga0326746_022433Not Available638Open in IMG/M
3300034655|Ga0326746_039640Not Available509Open in IMG/M
3300034656|Ga0326748_017203All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium960Open in IMG/M
3300034656|Ga0326748_019484Not Available907Open in IMG/M
3300034656|Ga0326748_039892Not Available654Open in IMG/M
3300034658|Ga0326751_025710Not Available585Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine50.88%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater12.28%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine10.53%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.26%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.63%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.63%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.75%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.75%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.75%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.75%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.75%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.75%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.88%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.88%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.88%
Diffuse Hydrothermal FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids0.88%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.88%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.88%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001723Marine viral communities from the Deep Pacific Ocean - MSP-144EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300006013Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_BEnvironmentalOpen in IMG/M
3300006076Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid AEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006313Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770mEnvironmentalOpen in IMG/M
3300006316Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000mEnvironmentalOpen in IMG/M
3300006326Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770mEnvironmentalOpen in IMG/M
3300006330Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006347Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000mEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006768Marine viral communities from Cariaco Basin, Caribbean Sea - 29_WHOI_OMZEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300009139Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaGEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021443Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015EnvironmentalOpen in IMG/M
3300021792Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Illium_FS922 150_kmerEnvironmentalOpen in IMG/M
3300025029Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025047Marine viral communities from the Pacific Ocean - LP-42 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025244Marine viral communities from the Deep Pacific Ocean - MSP-81 (SPAdes)EnvironmentalOpen in IMG/M
3300025248Marine viral communities from the Deep Pacific Ocean - MSP-118 (SPAdes)EnvironmentalOpen in IMG/M
3300025278Marine viral communities from the Deep Pacific Ocean - MSP-82 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026103Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034655Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 494_2800EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M
3300034658Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 524_CTDEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24661J20069_101104753300001723Deep OceanYYIDQKIIRHGKIDDMNLDQLYERMRTIKEKNEKLLEAKKLLKTNEESTSKGKGNTTKKLSLSPQIPDQDSTS*
JGI24514J20073_101328013300001731MarineRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNASEESKSQSIDKTVKLLPQSDKTDDQDSTS*
JGI24520J20079_100519543300001735MarineLYDRMKIIKEKNEKVLEAKELLNASEESESQDIDKTVKLLSPSNKINDQGSTS*
JGI24515J20084_101317733300001743MarineKVAGYYIDQKIIRHGKIDDLNLDQLYERMKTIKEKNEKVLEAKKLLAASEESPKDNKATTVKKLPSPQQKSDPDSTS*
JGI25131J35506_102748633300002511MarineKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNPSEESKSEGKDMTVKLPPPSQQTTDQDSTS*
JGI25131J35506_103655533300002511MarineKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNPSEESKSESKDMTVKLSLSSHKKSDQDSTS*
JGI25131J35506_105067033300002511MarineATTEIARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESESESKDMIVKLSLPSHKKSDQDSTS*
JGI25131J35506_106132433300002511MarineTEIARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNPSEESKSESKDMTVKL*
JGI25131J35506_106521523300002511MarineIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNFSEESKSESKDMTVKISLSSRKTSDQDSTS*
JGI25134J35505_1005313813300002518MarineGYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNXEPIVKKLPSSPQIIDPDSTS*
JGI25136J39404_101067443300002760MarineQLYERMRTIKEKNEKVLEAKKLLNSSEESESKSKDKIVKLLSPSQQTIDPDSTS*
JGI25136J39404_101300833300002760MarineVRHGKIDDLNLDQLYERMRTIKEKNERLLKAKEFLNKSSEEPELKSKDKTVKQLPPSHKINGQDSTS*
JGI25136J39404_103420643300002760MarineIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNSSEESKSERKDMTVKISLSSHKKSDQDSTS*
JGI25136J39404_104651433300002760MarineMRTIKEKNEKVLEAKKLLNPSEESKSEGKDMTVKLPPPSQQTTDQDSTS*
JGI25136J39404_108591313300002760MarineKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESESERKDTTVKISLSSHKKSDPDSTS*
PicViral_1006847133300003690Marine, Hydrothermal Vent PlumeDLNLDQLYERMRTIKEKNEKVLEAKKLLSSNEESESESKNITVKLSLLSHKISDQDSTS*
Ga0066382_1029934513300006013MarineGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLSSSEESESESKDMTVKLSPPSHRISDPDSTS*
Ga0081592_120805633300006076Diffuse Hydrothermal FluidsIKEKNEKVLEAKKLLNSSEESESESKDTTVKLLSPSRKITDPDSTS*
Ga0068470_118395913300006308MarineIARGKVAGYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESESESKDMTVKLSLSSHKKSDQDSTS*
Ga0068471_142829293300006310MarineHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNFSGESKSESKNMTVKLLSPSQRTTDQDSTS*
Ga0068472_1069246753300006313MarineTEIARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNASEESATDNTERTAKKLPSPQQTSDPDSTS*
Ga0068473_133398823300006316MarineMRTIKEKNEKVLEAKKLLSSSEESESESKDMTVKLLSPSQQTIDPDSTS*
Ga0068477_144253813300006326MarineKVAGYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLATNEESTTEHKLQQRKKLSSPQQTSDPDSTS*
Ga0068483_137540013300006330MarineGKIDDMNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESESVSKDTTVKLQSPSQQTNDPDSTSC*
Ga0068502_142401713300006336MarineARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESESESKDMTVKLSLSSHKKSDQDSTS*
Ga0068482_159783633300006338MarineRMRTIKEKNEKVLEAKKLLNSSEESESERKDMTVKISLSSQKKSDQDSTS*
Ga0068482_168466233300006338MarineIDDLNLDQLYERMRTIKEKNEKVLEAKKLLSASEESESKSKNTTVKLLSPSQQTIDPDSTS*
Ga0068503_1044919113300006340MarineIDQKIIRHGKIDDMNLDQLYERMRTIKEKNEKLLEAKKLLKTSGESKSQSIDKTVKLLPQSDKTNDQDSTS*
Ga0068503_1049471113300006340MarineRNLAAAATTEIARGKVGGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNSSEESKSESKDMTVKLLSPSLQTTDPDSTS*
Ga0068503_1059715513300006340MarineFYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKDLLNASEESKSESKDMIVKLSLPSRKKSDPDSTS*
Ga0068493_1062081143300006341MarineGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEELTSESKSQQQKKLPLPQQTSDPDSTS*
Ga0099697_140344013300006347MarineGYYIDQKIVRHGKIDDMNLDQLYERMRTIKEKNERLLKAKEALASAESTSESIKTPVKLSLVSNKTDDPDSTS*
Ga0098035_111517213300006738MarineYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNKEPIVKKLPSSPQIIDPDSTS*
Ga0098058_105588913300006750MarineGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNKEPIVKKLPSSPQIIDPDSTS*
Ga0098039_105902443300006753MarineIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSNEESESESKDMTVKLSLSSHKKSDQDSTS*
Ga0098039_126102533300006753MarineDLNLDQLYERMKTIKEKNEKVLKAKELLNVSEESKSQSIDKTVKLSPQSHKINDPDSTS*
Ga0098044_121534633300006754MarineYIDQKIVRHGKIDDLNLNQLYERMRTIKEKNEKVLEAKELLNASEESKSQSIDKTVKLSPQSHKINDPDSTS*
Ga0098071_11709313300006768MarineTEIARGKVAGYYIDQKVVRHGKIDDMNLDQLYDRMRTIKEKNERLLKAKEFLSKSTLESDSNSKEQIVEKLPSPKNTSDSDSTS*
Ga0098034_112005113300006927MarineKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNKEPIVKKLPSSPQIIDPDSTS*
Ga0114904_112642333300008218Deep OceanDLNLDQLYERMKTIKEKNEKVLEAKKLLNSSGESSSERKEQTVEKLPSPKHTSDSDSTS*
Ga0114949_1111189043300009139Deep SubsurfaceIRHGKIDDMNLDQLYERMRTIKEKNEKVLEAKNLLRTSEESKSESKETTVKLSPPSHKISDQDSTS*
Ga0114949_1158398813300009139Deep SubsurfaceQKIVRHGKIDDMNLDQLYDRMRTIREKNERMSKAKAFLDKSSGELMSENKDKTVKQLPPSRKINGQDSTS*
Ga0114996_1089867723300009173MarineMNLDQLYARMKTIKDKNEKVLEAKELLNSSEELESQSKDKTVKLLSPSNKISDRD*
Ga0114996_1127491833300009173MarineAGYYIDQKIIRHGSIDDMNLDQLYARMKTIKEKNEQLLEAKKMLASTEELKPQSKDPEQEPQPSPDKKDDPDSTSNSSS*
Ga0105214_10802633300009595Marine OceanicDQKIIRHGKIDDMNLDQLYERMRTIKEKNEKVLEAKELLNSSEESKSISKDTTVKLQSPSQQTNDPDSTS*
Ga0114999_1123603813300009786MarineTIKEKNEKVLEAKELLSASEEPKSESKNMTVKLSPQSHKISDQDSTS*
Ga0098061_101089313300010151MarineRHGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNEEPIVKKLPSSPQIIDPDSTS*
Ga0098047_1017937413300010155MarineEIARGKVAGYYIDQKIIRHGRIDDMNLDQLYDRMKTIKERNEKLIEAKKVLASSEESATDSKETTVKKLSSPQQTSDPDSTS*
Ga0098047_1024815613300010155MarineDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSTSESYPKQKMQQQKTLSSPQQIDDQDSTS
Ga0114934_1043809423300011013Deep SubsurfaceRGKVAGFYIDQKIIRHGNIDDMNLDQLYARMKTIKEKNEKIIEAKQILASEESQKENKKPQDKTLSSLENKNDQD*
Ga0181367_109148213300017703MarineIARGKVAGYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNEEPIVKKLPSSPQIIDPDSTS
Ga0181432_112106833300017775SeawaterATTEIARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNASEESKSQSINKTVKLLSLSDKINDRDSTS
Ga0181432_128402113300017775SeawaterKNEKVLEAKELLNPSEESKSESKDMTVKLSLSAHKKSDPDSTS
Ga0206681_1037290533300021443SeawaterTTEIARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNASEESKSESKDMTVKISLSSHKKSDQDSTS
Ga0226836_1081103413300021792Hydrothermal Vent FluidsDMNLDQLYERMRTIKEKNEKVLEAKKLLKTSEESKSESKETPVKLSPPSHKISDQDSTS
Ga0207900_11539433300025029MarineKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNASEESKSQSIDKTIKLLSPSSKINDQDSTS
Ga0207889_102812613300025042MarineIVRHGKIDDLNLDQLYERMRTIKEKNEKVLKAKELLNASEESKSQSTDKTVKLLSLSNKIDDQDSTS
Ga0207897_13139413300025047MarineDQLYERMRTIKEKNEKVLEAKDLLNASEESKSQSIDKTVKLLSLSDKINDQDSTS
Ga0207897_13281413300025047MarineGKVAGYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVLKAKELLNASEESKSQSTDKTVKLLSLSNKIDDQDSTS
Ga0207898_102596433300025049MarineKEKNEKVLEAKELLNSSEESKSESKDMTVKISLSSHKKSDRDSTS
Ga0207898_102749313300025049MarineIDQKIIRHGKIDDLNLDQLYERMKTIKEKNEKVLEAKELLNSNEESESESKDMTVKLSLSSHKKSYQDSTS
Ga0207906_100924843300025052MarineARGKVGGFYIDQKIVRHGKIDDLNLDQLYERMKTIKEKNEKVLEAKELLNTSEESKSQSTDITVKLLSLSDKINDQDPTS
Ga0207906_102037933300025052MarineIIRHGKIDDLNLDQLYERMKTIKEKNEKVLEAKKLLAASEESPKDNKATTVKKLPSPQQKSDPDSTS
Ga0207906_103673923300025052MarineLYARMKTIKEKNEKVLEAKEILNASEESKSQSIDKTIKLRSPSSKINDQD
Ga0207887_106886013300025069MarineDDLNLDQLYERMRTIKEKNEKVLEAKDLLNASEESKSESKDMIVKLSLPSRKKSDPDSTS
Ga0208010_106649213300025097MarineGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNKEPIVKKLPSSPQIIDPDSTS
Ga0208790_117240533300025118MarineGKVGGYYIDQKIIRHGNIDDMNLDQLYDHMKKIREKNERISKARDALAIASGESATDNTETAVKKLPSPPQKSDPDSTS
Ga0209644_103801513300025125MarineDDLNLDQLYERMRTIKEKNEKVLEAKKLLSSNEESESESRDKIVKLLSPSQQISDPDSTS
Ga0209644_105146613300025125MarineYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNERLLKAKEFLAKESSGESKSESKDSTVKLLSPSQQTTDPDSTS
Ga0209644_107452913300025125MarineIARGKVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLKAKELLNSSEESATDNTERTAKKLPSPQQTSDPDSTS
Ga0209644_107844223300025125MarineRDQGKKDSRNLAAAATTEIARGKVGGYYIDQKIIRHGKIDDLNLDQLYERMKTIKQKNQKVLKAKELLAAGSSEVSESTHKKHQGKKSSLLPKTDSQD
Ga0209644_110502213300025125MarineYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESKSESKDMTVKISLSSHKKSDRDSTS
Ga0209644_112347633300025125MarineVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNSSEESKSEGKNTTVKLLSPSHNKSDQDPTS
Ga0209644_112539933300025125MarineDDLNLDQLYERMRTIKEKNEKVLEAKKLLSASEESESKSKNTTVKLLSPSQQTIDPDSTS
Ga0209644_117185333300025125MarineDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNASEEPESENIDMRVKILSPSQQTTDPDSTS
Ga0209128_108460413300025131MarineGYYIDQKIVRHGKIDDLNLDQLYERMRTIKEKNEKVVEAKKLLSSNEESESDNKEPIVKKLPSSPQIIDPDSTS
Ga0209756_104547013300025141MarineGKAAGYYIDQKIIRHGKIDDLNLDQLYERMKTIKEKNERLLKAKEFLNSSEESELTHKSQQQKTLPSPQQKSDPDSTS
Ga0207882_105137613300025218Deep OceanYYIDQKIIRHGKIDDMNLDQLYERMRTIKEKNEKVLEAKKLLKTSEESKSESKETTVKLSPPSHKISDQDSTS
Ga0207908_101530543300025244Deep OceanIKEKNEKVLEAKKLLKTSGESKSESKETPVKLSPPSHRISDQDSTS
Ga0207904_107265933300025248Deep OceanLNLDQLYERMRTIKEKNEKVLEAKKLLEFSEESESKSKNMTVKLSPPSHKISDPDSTS
Ga0207417_105392433300025278Deep OceanLYERMRTIKEKNEKVLEAKELLNSSGESKSESKDMTVKLLSPSQQTIDPDSTS
Ga0209757_1006630343300025873MarineDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESATDNTETVVKKLPSPQQTSDPDSTS
Ga0209757_1008426513300025873MarineYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLSSNEESESESRDKIVKLLSPSQQISDPDSTS
Ga0209757_1008493733300025873MarineTIKEKNEKVLEAKKLLNPSEESKSEGKDMTVKLPPPSQQTTDQDSTS
Ga0209757_1012208933300025873MarineAAAATTEIARGKVSGYYIDQKIIRHGKIDDLNLDQLYERMKTIKQKNEKVLEAKKLLLSSEESTLEHKVKQVKKSPPSPQTNGQDSTS
Ga0209757_1018640333300025873MarineDQLYERMRTIKEKNEKVLEAKELLNSSEESKSEGKNTTVKLLSPSHNKSDQDPTS
Ga0209757_1028048633300025873MarineQKIIRHGRIEDLNLSQLYERMKTIKEKNERIVKAKEFLAKESGEESGSESKDTTVKILSPSHKTNDPDSTS
Ga0208451_104456643300026103Marine OceanicRHGKIDDMNLDQLYERMRTIKEKNEKLLEAKKLLKTNEESKSESKETTIKLSPPSHKISDPDSTS
(restricted) Ga0255054_1034415633300027856SeawaterKIIRHGSIDDMNLEQLYARMKTIKEKNQKVLEAKELLNASEELVSKNKETPVKKLPSPQKKSDPDSTS
(restricted) Ga0255053_1042140933300027868SeawaterIVRHGKIDDLNLDQLYERMKTIKEKNEKVLKAKELLNASEESKSQSIDKTIKLLSPSNKINDQDSTS
(restricted) Ga0255055_1014889243300027881SeawaterERMRTIKEKNEKVLEAKELLNASEESKSGSKNMTVKLSLPSHKKSDQDSTS
Ga0256382_110188433300028022SeawaterKVAGYYIDQKIVRHGKIDDLNLDQLYERMKTIKEKNEKVLEAKKLLNSSGESSSERKEQTVEKLPSPKHTSDSDSTS
Ga0302119_1039228833300031606MarineQLYERMRTIKEKNEKVLEAKELLNASEESKSESKDMTVKLSLPSHKKSDQDSTS
Ga0310121_1039978113300031801MarineKNEKVLEAKELLNASEEPKSENKNMTVKLSPRSDKISDQDSTS
Ga0310123_1024655313300031802MarineKNEKVLEAKELLNASEEPKSENKNMTVKLSPRSDKISDQDSTP
Ga0310125_1017806243300031811MarineEKNEKVLEAKELLNASEESKSESKDMTVKLSLPSHKKSDQDSTS
Ga0310344_1110841913300032006SeawaterGKAAGFYIDQKIIRHGSIDDMNLDQLYERMKVIKEKNERIMEAKQLLKSNDESSSDSKEQTVEKLPSPKHTSDSDSTS
Ga0310344_1128896613300032006SeawaterGKAAGFYIDQKIIRHGSIDDMNLDQLYERMKVIKEKNEKILEAKKLLKSTSESELESKTQQQKTLPSPQQKSDPDSTS
Ga0315334_1080134633300032360SeawaterIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLNSSEESESESKDMTVKLSLSSHKKSDQDSTS
Ga0314858_196196_26_1753300033742Sea-Ice BrineMKTIKEKNEKVLEAKELLNASEEPKSESKNMTVKLLPQSHKISDQDSTS
Ga0326755_004968_1085_12613300034628Filtered SeawaterMNLDQLYERMRTIKEKNEKLLEAKKLLKTNEESKSESKETTVKLSPPSHKISDQDSTS
Ga0326756_016747_1_2463300034629Filtered SeawaterEIARGKVGGYYIDQKIIRHGKIDDMNLDQLYERMRTIKAKNEKLLEAKKLLKTSGESKSESKETTVKLSPPSHKISDQDST
Ga0326756_020741_56_2053300034629Filtered SeawaterMKTIKEKNEKVLEAKQLLESSEESESERKDTTVKLSLMSDKISDPDSTS
Ga0326741_032432_685_8883300034654Filtered SeawaterVRHGQIDEMNLDQLYDRMRTIREKNERMSKAKAFLDKSSGELMSQSRDKTVKQLPPSRKTNGQDSTS
Ga0326741_047636_544_6933300034654Filtered SeawaterMRTIKEKNEKVLEAKKLLNSSEESESESIDTTVKLLSPSQQTTDPDSTS
Ga0326741_055423_1_2493300034654Filtered SeawaterEIARGKVGGFYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKKLLDSNEESGSEGKNTRVKLLSPSHKISDQDSTL
Ga0326746_012820_1_1773300034655Filtered SeawaterMNLDQLYERMRTIKEKNEKLLEAKKLLKTNEESKSESKETTVKLPPPSHKISDQDSTS
Ga0326746_017769_30_1793300034655Filtered SeawaterMKTIKEKNEKVLEAKKLLESNEESESESKDMTVKLSPPSHRISDPDSTS
Ga0326746_022433_383_6133300034655Filtered SeawaterVAGYYIDQKIIRHGKIDDLNLDQLYERMRTIKEKNEKVLEAKELLNSSAESKSKSKNMTVKLSPPSHKKSDQDSTS
Ga0326746_039640_291_4673300034655Filtered SeawaterMNLDQLYERMRTIKEKNEKVLEAKELLNSSEESKSISKDTTVKLQSPSQQTNDPDSTS
Ga0326748_017203_735_9083300034656Filtered SeawaterMNLDQLYERMRTIKAKNEKLLEAKKLLKTSGESKSESKETTVKLSPPSHKISDQDST
Ga0326748_019484_756_9053300034656Filtered SeawaterMRTIKEKNEKVLEAKKLLNPSEESKSESKDMTVKLLSPSQQTTDPDSTS
Ga0326748_039892_1_1773300034656Filtered SeawaterMNLDQLYERMRTIKEKNEKVLEAKKLLRTSEESTSTGKGTTTKKLSLSPQIPDQDSTS
Ga0326751_025710_452_5833300034658Filtered SeawaterKNEKVLEAKELLNSSEESKSISKDTTVKLQSPSQQTNDPDSTS


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