Metagenome / Metatranscriptome Family F081438

Overview

Basic Information

• Family ID: F081438
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 114
• Average Sequence Length: 35 residues
• Representative Sequence: MSKPIIALIVLGVIAFIAAMVIGVDALMCTPPCV
• Number of Associated Samples: 76
• Number of Associated Scaffolds: 114

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 65.79 %
• % of genes near scaffold ends (potentially truncated): 21.05 %
• % of genes from short scaffolds (< 2000 bps): 85.96 %
• Associated GOLD sequencing projects: 68
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (56.140 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (56.140 % of family members)
• Environment Ontology (ENVO): Unclassified (85.965 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (92.982 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 43.55%
  β-sheet: 0.00%
  Coil/Unstructured: 56.45%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01592	NifU_N	2.63
PF04466	Terminase_3	2.63
PF00149	Metallophos	1.75
PF13884	Peptidase_S74	1.75
PF08774	VRR_NUC	1.75
PF13385	Laminin_G_3	1.75
PF00386	C1q	1.75
PF10874	DUF2746	0.88
PF04851	ResIII	0.88
PF05930	Phage_AlpA	0.88
PF00012	HSP70	0.88
PF00303	Thymidylat_synt	0.88
PF00453	Ribosomal_L20	0.88
PF00005	ABC_tran	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	2.63
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	2.63
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.88
COG0292	Ribosomal protein L20	Translation, ribosomal structure and biogenesis [J]	0.88
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
All Organisms	root	All Organisms	43.86 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
cellular organisms	root	All Organisms → cellular organisms	25.44 %
Viruses	superkingdom	All Organisms → Viruses	18.42 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.54 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	4.39 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.54 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	4.39 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.88 %
Candidatus Dependentiae	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae	0.88 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.54 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	4.39 %
unclassified Candidatus Dependentiae	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.54 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	4.39 %
Candidatus Dependentiae bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	0.88 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.88 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001450|JGI24006J15134_10014750	All Organisms → Viruses → Predicted Viral	3726
3300001721|JGI24528J20060_1006577	Not Available	734
3300001727|JGI24529J20061_106746	Not Available	577
3300001728|JGI24521J20086_1018353	Not Available	541
3300001735|JGI24520J20079_1001175	All Organisms → cellular organisms → Bacteria	1799
3300001743|JGI24515J20084_1009352	Not Available	889
3300005948|Ga0066380_10204515	Not Available	599
3300006083|Ga0081762_1137489	Not Available	677
3300006091|Ga0082018_1059623	Not Available	688
3300006308|Ga0068470_1208500	Not Available	1112
3300006308|Ga0068470_1581443	Not Available	717
3300006308|Ga0068470_1581849	Not Available	601
3300006310|Ga0068471_1302580	Not Available	1378
3300006324|Ga0068476_1222006	All Organisms → cellular organisms → Bacteria	1726
3300006325|Ga0068501_1031089	Not Available	540
3300006325|Ga0068501_1466834	All Organisms → cellular organisms → Bacteria	847
3300006335|Ga0068480_1370839	All Organisms → Viruses → Predicted Viral	1030
3300006335|Ga0068480_1506623	All Organisms → Viruses → Predicted Viral	1293
3300006335|Ga0068480_1783016	All Organisms → cellular organisms → Bacteria	935
3300006336|Ga0068502_1202216	All Organisms → Viruses → Predicted Viral	1454
3300006336|Ga0068502_1238323	Not Available	1151
3300006336|Ga0068502_1303614	All Organisms → Viruses → Predicted Viral	1883
3300006336|Ga0068502_1340376	Not Available	588
3300006336|Ga0068502_1377407	All Organisms → Viruses → Predicted Viral	1115
3300006336|Ga0068502_1493001	Not Available	836
3300006336|Ga0068502_1636408	Not Available	1334
3300006338|Ga0068482_1221046	Not Available	1085
3300006338|Ga0068482_1223209	All Organisms → Viruses → Predicted Viral	1003
3300006339|Ga0068481_1139494	All Organisms → cellular organisms → Bacteria	1006
3300006339|Ga0068481_1527782	All Organisms → Viruses → Predicted Viral	2306
3300006341|Ga0068493_10370631	All Organisms → cellular organisms → Bacteria	1310
3300006344|Ga0099695_1137839	Not Available	522
3300006346|Ga0099696_1198550	Not Available	528
3300006726|Ga0098070_107026	Not Available	621
3300006736|Ga0098033_1022251	Not Available	1959
3300006736|Ga0098033_1031911	All Organisms → Viruses → Predicted Viral	1593
3300006736|Ga0098033_1052992	All Organisms → cellular organisms → Bacteria	1188
3300006736|Ga0098033_1204210	Not Available	547
3300006738|Ga0098035_1004631	All Organisms → Viruses	6078
3300006738|Ga0098035_1041715	All Organisms → Viruses → Predicted Viral	1705
3300006738|Ga0098035_1150360	All Organisms → cellular organisms → Bacteria	792
3300006738|Ga0098035_1308439	Not Available	515
3300006750|Ga0098058_1191044	Not Available	534
3300006751|Ga0098040_1094010	Not Available	906
3300006751|Ga0098040_1111635	Not Available	820
3300006752|Ga0098048_1015750	All Organisms → cellular organisms → Bacteria	2587
3300006752|Ga0098048_1047629	All Organisms → cellular organisms → Bacteria	1354
3300006752|Ga0098048_1224254	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	552
3300006753|Ga0098039_1060756	Not Available	1316
3300006753|Ga0098039_1174640	Not Available	731
3300006754|Ga0098044_1215143	Not Available	752
3300006754|Ga0098044_1352193	Not Available	558
3300006768|Ga0098071_117985	Not Available	608
3300006789|Ga0098054_1002483	Not Available	8669
3300006789|Ga0098054_1044687	All Organisms → Viruses → Predicted Viral	1708
3300006789|Ga0098054_1074715	All Organisms → Viruses → Predicted Viral	1281
3300006789|Ga0098054_1193931	All Organisms → cellular organisms → Bacteria → Proteobacteria	742
3300006789|Ga0098054_1219594	Not Available	690
3300006789|Ga0098054_1223142	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	683
3300006793|Ga0098055_1090582	All Organisms → Viruses → Predicted Viral	1199
3300006793|Ga0098055_1152740	Not Available	888
3300006923|Ga0098053_1008301	All Organisms → Viruses → Predicted Viral	2433
3300006923|Ga0098053_1093262	Not Available	608
3300006924|Ga0098051_1116820	All Organisms → cellular organisms → Bacteria	712
3300006925|Ga0098050_1105967	Not Available	717
3300006926|Ga0098057_1000354	All Organisms → cellular organisms → Bacteria	16420
3300006926|Ga0098057_1067316	Not Available	874
3300006927|Ga0098034_1028718	All Organisms → Viruses → Predicted Viral	1684
3300006927|Ga0098034_1029994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	1645
3300006929|Ga0098036_1108543	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	852
3300006988|Ga0098064_144197	Not Available	562
3300007514|Ga0105020_1000614	Not Available	50750
3300007665|Ga0102908_1115883	Not Available	547
3300007758|Ga0105668_1063921	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	862
3300007771|Ga0105700_1131309	Not Available	817
3300007771|Ga0105700_1201197	Not Available	929
3300007963|Ga0110931_1114116	All Organisms → cellular organisms → Bacteria	813
3300007963|Ga0110931_1238905	Not Available	540
3300008050|Ga0098052_1147589	Not Available	933
3300008050|Ga0098052_1348358	Not Available	555
3300008051|Ga0098062_1009069	All Organisms → Viruses → Predicted Viral	2127
3300008629|Ga0115658_1161936	All Organisms → cellular organisms → Bacteria	1143
3300008735|Ga0115657_1242613	All Organisms → cellular organisms → Bacteria	889
3300008738|Ga0115660_1253765	Not Available	540
3300008740|Ga0115663_1014483	All Organisms → Viruses → Predicted Viral	2982
3300009049|Ga0102911_1076495	All Organisms → cellular organisms → Bacteria	966
3300009079|Ga0102814_10377635	Not Available	771
3300009103|Ga0117901_1163064	All Organisms → cellular organisms → Bacteria	1231
3300009104|Ga0117902_1102908	All Organisms → cellular organisms → Bacteria	3128
3300009335|Ga0117926_1038904	Not Available	2143
3300009412|Ga0114903_1011757	All Organisms → Viruses → Predicted Viral	2455
3300009619|Ga0105236_1046972	Not Available	567
3300009620|Ga0114912_1122006	Not Available	616
3300010149|Ga0098049_1099909	Not Available	908
3300010150|Ga0098056_1328688	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	502
3300010153|Ga0098059_1104805	All Organisms → Viruses → Predicted Viral	1123
3300010153|Ga0098059_1129886	Not Available	996
3300010153|Ga0098059_1207340	Not Available	762
3300012954|Ga0163111_11485027	Not Available	670
3300013114|Ga0171650_1010942	All Organisms → Viruses → Predicted Viral	3929
3300020263|Ga0211679_1088118	Not Available	513
3300020407|Ga0211575_10447508	Not Available	534
3300021359|Ga0206689_11221590	All Organisms → cellular organisms → Bacteria	812
3300025050|Ga0207892_1003566	Not Available	1554
3300025069|Ga0207887_1050926	Not Available	675
3300025084|Ga0208298_1034898	Not Available	1036
3300025085|Ga0208792_1003262	All Organisms → cellular organisms → Bacteria → Proteobacteria	4487
3300025098|Ga0208434_1020421	Not Available	1663
3300025108|Ga0208793_1008027	Not Available	4405
3300025133|Ga0208299_1175652	All Organisms → cellular organisms → Bacteria	653
3300027630|Ga0209432_1139852	Not Available	700
3300028488|Ga0257113_1143690	Not Available	720
3300031861|Ga0315319_10491444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	613
3300032360|Ga0315334_10835361	Not Available	798

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.33%
Coastal	Environmental → Aquatic → Marine → Coastal	7.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.39%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.75%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	60.53%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	14.91%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	7.89%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.63%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	2.63%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.75%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	56.14%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	14.04%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	7.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	7.02%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.63%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.75%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.75%
Diffuse Vent Fluid, Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents	1.75%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.88%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.88%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.88%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.88%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.88%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental
3300001721	Marine viral communities from the Pacific Ocean - LP-54	Environmental
3300001727	Marine viral communities from the Pacific Ocean - LP-55	Environmental
3300001728	Marine viral communities from the Pacific Ocean - LP-46	Environmental
3300001735	Marine viral communities from the Pacific Ocean - LP-45	Environmental
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental
3300006083	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS908_Marker33_DNA	Environmental
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental
3300006344	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500m	Environmental
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental
3300006726	Marine viral communities from Cariaco Basin, Caribbean Sea - 28_WHOI_OMZ	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental
3300006768	Marine viral communities from Cariaco Basin, Caribbean Sea - 29_WHOI_OMZ	Environmental
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental
3300006988	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl	Environmental
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental
3300007665	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-3	Environmental
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental
3300007771	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS917_Marker33_DNA CLC_assembly	Environmental
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300008051	Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZ	Environmental
3300008629	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um	Environmental
3300008735	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um	Environmental
3300008738	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um, replicate b	Environmental
3300008740	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate a	Environmental
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental
3300009335	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate a	Environmental
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental
3300013114	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate a	Environmental
3300020263	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)	Environmental
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental
3300021359	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)	Environmental
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental
3300027630	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m (SPAdes)	Environmental
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_100147507	3300001450	Marine	MSKPIIALIVAGVILFITAMVIGVEALMCTPPCV*
JGI24528J20060_10065773	3300001721	Marine	MSKPVIALIIFGVIAFIAAMAIGVDALMCKPPCV*
JGI24529J20061_1067462	3300001727	Marine	MSKPVIALIIFGVIVFVTAMVIGVDSLMCTPPCV*
JGI24521J20086_10183531	3300001728	Marine	MSKPIIALIVVGVIVFIAAMVIGVDALMCTPPCV*
JGI24520J20079_10011752	3300001735	Marine	MTKPVIALIIFGTIVFVAAMAIGVDALMCTPPCI*
JGI24515J20084_10093522	3300001743	Marine	MTKPVIALIIFGVIAFIAAMVIGVDALMCKPPCV*
Ga0066380_102045151	3300005948	Marine	MSKPVIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0081762_11374892	3300006083	Diffuse Hydrothermal Flow Volcanic Vent	MSKPIIALIVVGVIVFIAAMVIGVDALMCKPPCV*
Ga0082018_10596232	3300006091	Marine	MSKPIIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0068470_12085004	3300006308	Marine	MSKPIIALIVLFVLAFIAAMVIGVDALMCTPPCV*
Ga0068470_15814432	3300006308	Marine	MSKPIIALIVAGVILFVTAMVIGVDALMCAPPCV*
Ga0068470_15818491	3300006308	Marine	YREETRMSKPIIALIVVGVILFVTAMVIGVDALMCTPPCV*
Ga0068471_13025804	3300006310	Marine	MSKPIIALIVLFVIAFIAAMIIGVDALMCTPPCV*
Ga0068476_12220064	3300006324	Marine	MSKWMIALIVLGVILFIATLFIGVEALMCTPPCV*
Ga0068501_10310891	3300006325	Marine	MTKPIIALIVLGVIVFIVAMVIGVDALMCTPPCV*
Ga0068501_14668344	3300006325	Marine	MSKPIIALIVLGVIVFIAAMVIGVDALMCAPPCV*
Ga0068480_13708393	3300006335	Marine	MSKWMIALIVLGVILFIAAMVIGVDALMCTPPCV*
Ga0068480_15066235	3300006335	Marine	VSKPIIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0068480_17830162	3300006335	Marine	MSKPTIILIAVGMIVFIAAMVIGVDALMCTPPCV*
Ga0068502_12022162	3300006336	Marine	MTKSVIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0068502_12383233	3300006336	Marine	VSKPIIALIVAGVILFVTAMVIGVDALMCAPPCV*
Ga0068502_13036142	3300006336	Marine	MSKPIIALIVSGVILFVTAMVIGVDALMCTPPCV*
Ga0068502_13403762	3300006336	Marine	VSKPIIALIVLGVIVFIVAMVIGVDALMCEPPCV*
Ga0068502_13774074	3300006336	Marine	MSKPIIALIVLGVIVFIVAMVIGVDALMCTPPCV*
Ga0068502_14930013	3300006336	Marine	MSKPIIALIVVFVLAFIAAMVIGVDALMCTPPCV*
Ga0068502_16364081	3300006336	Marine	MSKPIIALIVLGVIVFIAAMVIGVEALMCTPPCV*
Ga0068482_12210461	3300006338	Marine	MSKPVIALIILFTIAFIAAMVIGVDALMCTPPCV*
Ga0068482_12232091	3300006338	Marine	EVRMSKPIIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0068481_11394944	3300006339	Marine	MSKPIIALIVAGVILFVTAMVIGVDALMCTPPCV*
Ga0068481_15277825	3300006339	Marine	VSKPIIALIVLGVIVFIVAMVIGVDALMCAPPCV*
Ga0068493_103706313	3300006341	Marine	MSKPIIALIVLGVIVFIVAMVIGVDALMCEPPCV*
Ga0099695_11378393	3300006344	Marine	RMSKPIIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0099696_11985501	3300006346	Marine	PIIALIVLFVIAFIAAMVIGVDALMCTPPCVRQR*
Ga0098070_1070262	3300006726	Marine	MNKWMIALIATGVIAFIAAMVIGVVALMCTPPCV*
Ga0098033_10222514	3300006736	Marine	MNKWVIISIALGVIAFIAAMVIGVDALMCTPPCV*
Ga0098033_10319113	3300006736	Marine	MTKPVIALIIFGVIAFIAVMFLGVDALMCESPCV*
Ga0098033_10529923	3300006736	Marine	MSKVTWTLIIVGVIVFIAAMVVGVDALMCAPPCI*
Ga0098033_12042102	3300006736	Marine	MTKPIIALIVLGVIAFIAAMAIGVDALMCTPPCV*
Ga0098035_100463110	3300006738	Marine	MNKWIIISIALGVIAFIAAMAIGVDALMCTPPCV*
Ga0098035_10417152	3300006738	Marine	MSKPVIALIIFGVIAFIAVMFLGVDALMCKPPCV*
Ga0098035_11503604	3300006738	Marine	MSKPIIALIVLGVIAFIAAMVIGVDALMCTPPRV*
Ga0098035_13084391	3300006738	Marine	MSKPIIALIVLGVIAFIAAMVIGVDALMCTPPCV*
Ga0098058_11910442	3300006750	Marine	MSKPIIALIVLGVILFVATMFIGVDALMCEPPCV*
Ga0098040_10940103	3300006751	Marine	MNKWIIALIAVGIILFIAGMVIGVDALMCTPPCV*
Ga0098040_11116352	3300006751	Marine	MTKPIIALIVLGVIAFIAAMVIGVDALMCTPPCV*
Ga0098048_10157503	3300006752	Marine	MSDRLRNNMSKPIIALIVLGVIAFIAAMVIGVEALMCEPPCV*
Ga0098048_10476292	3300006752	Marine	MSNPIILLIALGIIGFIAVMFIGVNALMCEPPCV*
Ga0098048_12242541	3300006752	Marine	MSKPIIALIVLGVIAFIAAMVIGVDALMCEPPCV*
Ga0098039_10607564	3300006753	Marine	MNKWIIALIAAGIIAFIAAMAIGVDALMCTPPCV*
Ga0098039_11746402	3300006753	Marine	MSKLTIVLIALGIIVFIAAMVIGVDALMCEPPCV*
Ga0098044_12151431	3300006754	Marine	MNKWIIALIAVGIILFIAAMVIGVDALMCTPPCV*
Ga0098044_13521932	3300006754	Marine	MTKPIIALIVLGVIVFIAAMVIGVDALMCTPPCV*
Ga0098071_1179851	3300006768	Marine	MNKWIIALIAAGIILFIAAMVIGVDALMCTPPCV*
Ga0098054_10024839	3300006789	Marine	MSKPVIALIVLGVILFIITLFIGVDALMCEPPCV*
Ga0098054_10446874	3300006789	Marine	MSKPVIALIVLGVIAFIAAMVIGVDALMCTPPCV*
Ga0098054_10747153	3300006789	Marine	MSNPIILLIALGIIGFIAVMFIGVNALMCEPPVYDRDRKV
Ga0098054_11939313	3300006789	Marine	MSKPIIALIVLGVILFIAAMVIGVDALMCEPPCV*
Ga0098054_12195942	3300006789	Marine	MTKPIIALIVLGVIAFIATLFIGVDALMCTPPCV*
Ga0098054_12231422	3300006789	Marine	MSKPIIALIVLGVIAFIAAMVIGVDTLMCEPPCV*
Ga0098055_10905823	3300006793	Marine	MSNPIILLIALGIIGFIAVMFIGVNALMCEPPVYDRDR
Ga0098055_11527402	3300006793	Marine	MTKLTIVLIALGVIAFIAAMVIGVDALMCTPPCV*
Ga0098053_10083015	3300006923	Marine	MSNPIILLIALGIIGFITVMFIGVNTLMCEPPCV*
Ga0098053_10932621	3300006923	Marine	SLMSNPIILLIALGIIGFITVMFIGVNALMCEPPCV*
Ga0098051_11168204	3300006924	Marine	VIMSKPIIALIVLGVIAFIAAMVIGVDTLMCEPPCV*
Ga0098050_11059671	3300006925	Marine	IMSKATWILIILGIAAFIAAMVIGVDTLMCTPPCI*
Ga0098057_10003543	3300006926	Marine	MSKPIIALIILFTIAFIAAMVIGVDALMCTPPCV*
Ga0098057_10673161	3300006926	Marine	MSKPVIVLIVLGVIAFIAAMVIGVDALMCTPPCV*
Ga0098034_10287183	3300006927	Marine	MSNPIILLIALGIIGFITVMFIGVNALMCEPPCV*
Ga0098034_10299941	3300006927	Marine	MNKWIIISIALGVIAFIAAMVIGVDALMCTPPCV*
Ga0098036_11085432	3300006929	Marine	MSKPIIALIVLGVIAFIAVMVIGVDALMCEPPCV*
Ga0098064_1441972	3300006988	Marine	MNKWIIALIAVGIILFIATMIIGVDALMCTPPCV*
Ga0105020_100061473	3300007514	Marine	MSKAIILLIILGVVAFIAAMVIGVDALMCTPPCV*
Ga0102908_11158831	3300007665	Estuarine	TRMSKLIIALIVLFVIAFLAAMVIGVDALMCTPPCV*
Ga0105668_10639213	3300007758	Background Seawater	MSKPIIALIVLGVILFIAAMVIGVDALMCTPPCV*
Ga0105700_11313093	3300007771	Diffuse Vent Fluid, Hydrothermal Vents	MSKPIIALIVVGVILFIATMIIGVDALMCTPPCV*
Ga0105700_12011972	3300007771	Diffuse Vent Fluid, Hydrothermal Vents	MSKPVIALIIFGVIAFIAAMVIGVDSLMCTPPCV*
Ga0110931_11141161	3300007963	Marine	IMSKATWILIILGIAAFIGAMVIGVDTLMCTPPCV*
Ga0110931_12389052	3300007963	Marine	MNKWIIALIAAGIILFVAGMVIGVDALMCTPPCV*
Ga0098052_11475893	3300008050	Marine	MTKPIIALIVLGVIAFIAVMFIGVDALMCEPPCV*
Ga0098052_13483582	3300008050	Marine	MSKPIIALIVLFVIAFIAAMVIGVDTLMCEPPCV*
Ga0098062_10090696	3300008051	Marine	MNKWIIALIAAGIVLFIAGMVIGVDALMCTPPCV*
Ga0115658_11619362	3300008629	Marine	MNKWIIALIATGIILFIAGMVIGVDALMCTPPCV*
Ga0115657_12426132	3300008735	Marine	MSKITIALIATGVILFIAGMVIGVDALMCTPPCV*
Ga0115660_12537652	3300008738	Marine	MNKWMIALIAVGIILFIATMIIGVDALMCTPPCV*
Ga0115663_10144835	3300008740	Marine	MNKWMIALIATGVIAFIAAMVIGVDALMCTPPCV*
Ga0102911_10764952	3300009049	Estuarine	MSKPIIALIVAGVILCITAMVIGVDALMCAPPCV*
Ga0102814_103776353	3300009079	Estuarine	MSKPIIALIVLGVIAFIATLFIGVDALMCTPPCV*
Ga0117901_11630642	3300009103	Marine	MSKITWALIILGAAAFIAVMVIGVDALMCTPPCV*
Ga0117902_11029082	3300009104	Marine	MSKITWALIILGATAFIAAMVIGVDTLMCTPPCV*
Ga0117926_10389042	3300009335	Marine	MNKWIIALIAAGIVLFIAAMVIGVDALMCTPPCV*
Ga0114903_10117575	3300009412	Deep Ocean	MSKPIIALIVLFVLAFKAAMVIGVDALMCTPPCV*
Ga0105236_10469723	3300009619	Marine Oceanic	MNKWIIALIAVGIILFIASMVIGVDALMCTPPCV*
Ga0114912_11220062	3300009620	Deep Ocean	MSKSIIALIVLFVIAFIAAMVIGVDALMCTPPCV*
Ga0098049_10999092	3300010149	Marine	MSNPIIALIALGIIGFIAVMFIGVNALMCEPPCV*
Ga0098056_13286881	3300010150	Marine	MSKPIIALIVLGVIAFIAAMVLGVDAFMCEPPCV*
Ga0098059_11048053	3300010153	Marine	MSKWMIALIVLGVVLFIATMFIGVDALMCKPPCV*
Ga0098059_11298863	3300010153	Marine	MNKWIIALIATGVILFIAGMVIGVDALMCTPPCV*
Ga0098059_12073402	3300010153	Marine	MSKPVIALIIFFTIAFIAVLFIGVDALMCEPPCV*
Ga0163111_114850273	3300012954	Surface Seawater	MSKTIIALIATGVIAFIAAMVIGVDALMCTPPCV*
Ga0171650_10109424	3300013114	Marine	MSKPIIALIVLGVLLFIATMIIGVDALMCEPPCV*
Ga0211679_10881181	3300020263	Marine	LRKVMTKPVIALIIFGVILFVAVMFIGVDALMCKPPCV
Ga0211575_104475083	3300020407	Marine	IVMSKPVIALIIFFVIAFIAVLFIGVDALMCEPPCV
Ga0206689_112215904	3300021359	Seawater	DIMSKVTWALIIVGVIVFIAAMVIGVDALMCTPPCV
Ga0207892_10035661	3300025050	Marine	KLGDRVSKPVIALIIFGVIAFIAAMAIGVDALMCKPPCV
Ga0207887_10509264	3300025069	Marine	EFDEMSKPIIVLITLGVILAIVAMWIGVDALMCEPPCI
Ga0208298_10348983	3300025084	Marine	MSDRLRNNMSKPIIALIVLGVIAFIAAMVIGVEALMCEPPC
Ga0208792_100326213	3300025085	Marine	SSKRSYNLMSDRLRNNMSKPIIALIVLGVIAFIAAMVIGVEALMCEPPCV
Ga0208434_10204215	3300025098	Marine	MSDRLRNNMSKPIIALIVLGVIAFIAAMVIGVEALMCEPPCV
Ga0208793_10080279	3300025108	Marine	MSDRLRNNMSKPIIALIVLGVIAFIAAMVIGVEALMCE
Ga0208299_11756523	3300025133	Marine	IMSKPIIALIVLGVIAFIAAMVIGVDTLMCEPPCV
Ga0209432_11398521	3300027630	Marine	PTCKLGIIMSKPIIALIVLFVIAFIAAMVIGVDALMCTPPCV
Ga0257113_11436904	3300028488	Marine	KNRNSSIVMTKPIIALIIFGTIVFVAAMAIGVDALMCTPPCI
Ga0315319_104914441	3300031861	Seawater	QKKMSKPIIALIVLGVILFVTTLFLGVDALMCTPPCV
Ga0315334_108353611	3300032360	Seawater	RNSNLLMTKPIIALIVLGVIVFIAAMVIGVDALMCKPPCV