Metagenome / Metatranscriptome Family F081330

Overview

Basic Information

• Family ID: F081330
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 114
• Average Sequence Length: 46 residues
• Representative Sequence: MTMEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK
• Number of Associated Samples: 87
• Number of Associated Scaffolds: 114

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Viruses
• % of genes with valid RBS motifs: 34.21 %
• % of genes near scaffold ends (potentially truncated): 15.79 %
• % of genes from short scaffolds (< 2000 bps): 75.44 %
• Associated GOLD sequencing projects: 79
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Duplodnaviria (48.246 % of family members)
• NCBI Taxonomy ID: 2731341
• Taxonomy: All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (30.702 % of family members)
• Environment Ontology (ENVO): Unclassified (60.526 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (74.561 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 72.34%
  β-sheet: 0.00%
  Coil/Unstructured: 27.66%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF14279	HNH_5	39.47
PF01844	HNH	11.40
PF01555	N6_N4_Mtase	4.39
PF13748	ABC_membrane_3	3.51
PF06467	zf-FCS	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	4.39
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	4.39
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	4.39

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.54 %
Unclassified	root	N/A	32.46 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	6.14 %
Unclassified	root	N/A	32.46 %
Viruses	superkingdom	All Organisms → Viruses	61.40 %

Level 3

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.63 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	48.25 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %

Level 4

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	48.25 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	2.63 %

Level 5

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	48.25 %

Level 6

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	48.25 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %

Level 7

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	3.51 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	48.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %

Level 8

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	3.51 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 9

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 10

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 11

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 12

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 13

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 14

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Crustacea	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 15

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Oligostraca	superclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 16

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Ostracoda	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 17

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Podocopa	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 18

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Podocopida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 19

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Cypridocopina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 20

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Cypridoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 21

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Cyprididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 22

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Notodromas	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae → Notodromas	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Level 23

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.63 %
Notodromas monacha	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae → Notodromas → Notodromas monacha	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.16 %
Unclassified	root	N/A	32.46 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	48.25 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002161|JGI24766J26685_10003093	All Organisms → Viruses → Predicted Viral	4907
3300002408|B570J29032_109611499	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	936
3300002447|JGI24768J34885_10006464	All Organisms → Viruses → Predicted Viral	3861
3300002447|JGI24768J34885_10140621	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	813
3300002835|B570J40625_100058495	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5329
3300002835|B570J40625_100140283	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2796
3300003404|JGI25920J50251_10068173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	883
3300003986|Ga0063233_10094646	Not Available	877
3300004054|Ga0063232_10256218	Not Available	529
3300004769|Ga0007748_11294375	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.88%
Environmental	Environmental	99.12%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.12%
Wastewater	Engineered → Wastewater	0.88%

Category

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.88%
Freshwater	Environmental → Aquatic → Freshwater	87.72%
Marine	Environmental → Aquatic → Marine	11.40%

Type

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.14%
Lake	Environmental → Aquatic → Freshwater → Lake	35.09%
Lentic	Environmental → Aquatic → Freshwater → Lentic	43.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.26%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.88%

Subtype

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.39%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.14%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	38.60%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.46%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.88%

Habitat

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.88%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.14%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.39%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.88%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.14%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.26%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.39%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.88%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	7.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	30.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	13.16%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.63%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.39%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.63%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental
3300003986	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (v2)	Environmental
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental
3300004769	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24766J26685_1000309311	3300002161	Freshwater And Sediment	MEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKK*
B570J29032_1096114993	3300002408	Freshwater	MEQEILGFTNWLYTNNWKLIGDGMCLNLETKEIGYINELMVEYELIAEYKE*
JGI24768J34885_100064645	3300002447	Freshwater And Sediment	MEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYKKYKL*
JGI24768J34885_101406211	3300002447	Freshwater And Sediment	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKEIGCIDELMVEYNK*
B570J40625_10005849515	3300002835	Freshwater	MTMEQEILGFTNWLYTNNWKLIGDGMCLNLETKEIGYINELMVEYELIAEYKE*
B570J40625_1001402833	3300002835	Freshwater	MSLEKEILGFTNWLYANNWKLIGDGMCLNLETKSIGYINELMVEYNK*
JGI25920J50251_100681732	3300003404	Freshwater Lake	MEQEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK*
Ga0063233_100946462	3300003986	Freshwater Lake	MGQEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK*
Ga0063232_102562182	3300004054	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK*
Ga0007748_112943752	3300004769	Freshwater Lake	MSLEKEILGFTNWLYINNWKLIGDGMCLNLETKAIGRIDELMVEYNK*
Ga0070374_100731813	3300005517	Freshwater Lake	MEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK*
Ga0070374_101823113	3300005517	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKAIGRIDELMVEYNK*
Ga0078894_106947052	3300005662	Freshwater Lake	MSLEKEILGFTNWLYANNWKLIGDGMCLNLETKAIGYINELMVEYKN*
Ga0078894_117455981	3300005662	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYINELMVEYNK*
Ga0070744_101095612	3300006484	Estuarine	MSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKAIGRIDELMVEYKN*
Ga0102817_11064872	3300007555	Estuarine	MTTAQDILGFTNWLYINNWKLIGDGMCLNIKTKDIGYINELMVEYELIDEYKE*
Ga0102828_10797063	3300007559	Estuarine	MSLEKEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK*
Ga0102872_10963913	3300007621	Estuarine	MTMEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGRIDELMVEYKK*
Ga0102859_12610202	3300007708	Estuarine	MTMEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELIVEYKK*
Ga0104986_197096	3300007734	Freshwater	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGRIDELMVEYNK*
Ga0114340_11684423	3300008107	Freshwater, Plankton	MTMEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKK*
Ga0114343_12141462	3300008110	Freshwater, Plankton	MTMEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKN*
Ga0114351_10504633	3300008117	Freshwater, Plankton	MTTTEEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYNK*
Ga0114364_103483713	3300008267	Freshwater, Plankton	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYIEELMVEYKK*
Ga0114364_10979092	3300008267	Freshwater, Plankton	MTMGQEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK*
Ga0114876_10489342	3300008448	Freshwater Lake	MEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK*
Ga0114876_11025263	3300008448	Freshwater Lake	MEQEMLGFTNWLYINNWKLIGDGMCLNTETKAIGYINELMTEYNK*
Ga0114876_11201202	3300008448	Freshwater Lake	MTMEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKK*
Ga0102831_10234123	3300008996	Estuarine	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKK*
Ga0102829_10956433	3300009026	Estuarine	MTMEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK*
Ga0102829_13132752	3300009026	Estuarine	MTMEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGRIDELMVEYNK*
Ga0114980_101385643	3300009152	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKMIGRIDELMVEYNK*
Ga0114968_100321982	3300009155	Freshwater Lake	MSLEKEILGFTNWLYINNWKLIGDGMCLNTETKAIGRIDELMVEYKK*
Ga0114977_102732622	3300009158	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNIETKAIGRIDELMVEYNK*
Ga0114978_105092712	3300009159	Freshwater Lake	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKEIGYIEELMVEYKK*
Ga0114970_100036218	3300009163	Freshwater Lake	MTTAQDILGFTNWLYNNNWKLIGDGMCLNLETKAIGYIDELMVEYKK*
Ga0114975_101698983	3300009164	Freshwater Lake	MSLEKEILGFTNWLYANNWKLIGDGMCLNTETKAIGYINELMVEYKN*
Ga0114975_106122501	3300009164	Freshwater Lake	LEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK*
Ga0105097_103789032	3300009169	Freshwater Sediment	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKVIGRIDELMVEYNK*
Ga0114979_104673952	3300009180	Freshwater Lake	MSLEKEILGFKNWLYTKNWKLIGDGMCLNIETKAIGRIDELMVEYNK*
Ga0114974_104861581	3300009183	Freshwater Lake	MTTSQEILGFTNWLYDNNWKLIGDGMCLNLETKAIGYINELMVEYKK*
Ga0114976_1001251715	3300009184	Freshwater Lake	MSLEKEILGFTNWLYANNWKLIGDGMCLNTETKAIGYIDELMVEYNK*
Ga0116245_100995744	3300010338	Anaerobic Digestor Sludge	MTTGQEILDFTNWLHKNNWKLIGDGMCLHLESKQIKFIKDLLVESK*
Ga0133913_111944925	3300010885	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGTGMCLNTETKAIGYIDELMVE
Ga0181345_1034501	3300017699	Freshwater Lake	MEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYKK
Ga0181350_10670761	3300017716	Freshwater Lake	MLLEKEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0181347_10213721	3300017722	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEY
Ga0181362_10862761	3300017723	Freshwater Lake	EQEILGFTNWLYINNWRLIGDGMCLNLETKAIGRIDELMVEYNK
Ga0181356_10758114	3300017761	Freshwater Lake	FTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0181358_12804331	3300017774	Freshwater Lake	NGETMSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKAIGRIDELMVEYNK
Ga0181346_13299862	3300017780	Freshwater Lake	MGQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMV
Ga0181348_10160222	3300017784	Freshwater Lake	MTMEQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYIEELMVEYKK
Ga0181348_10925174	3300017784	Freshwater Lake	MGQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK
Ga0181355_11970421	3300017785	Freshwater Lake	EILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0181355_13186571	3300017785	Freshwater Lake	MTTAQDILGFTNWLYNNNWKLIGDGMCLNLETKAIGYIEELMVEYKK
Ga0181359_10095396	3300019784	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKAIGYINELMVEYNK
Ga0181359_11762834	3300019784	Freshwater Lake	MEQEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0211732_13298093	3300020141	Freshwater	MTTTEEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYNK
Ga0211736_1085449513	3300020151	Freshwater	MEQEILSFTNWLYINNWKLIGAGMCLNTETKDIGYINELMVEYNK
Ga0211734_106466533	3300020159	Freshwater	MTTTEEILGFTNWLYNNNWKLIGDGMCLNLETKEIGYVNELMTEYKK
Ga0211734_108772522	3300020159	Freshwater	MEQEILSFTNWLYINNWKLIGDGMCLNTETKAIGRINELMVEYNK
Ga0211733_101278793	3300020160	Freshwater	MEQEILSFTNWLYINNWKLIGAGMCLNTETKDIGYINELMV
Ga0211735_113806292	3300020162	Freshwater	MTTTEEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKN
Ga0207942_100183911	3300020549	Freshwater	MSLEKEILGFTNWLYANNWKLIGDGMCLNLETKSIGYINELMVEYNK
Ga0208597_10504143	3300020562	Freshwater	MTMEQEILGFTNWLYTNNWKLIGDGMCLNLETKEIGYINELMVEYELIAEYKE
Ga0207909_10687042	3300020572	Freshwater	MSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKEIGYINELMVEYELIAEYKE
Ga0194048_100466922	3300021519	Anoxic Zone Freshwater	MLLEKEILGFTNWLYTNNWKLIGDGMCLNIETKAIGRIDELMVEYNK
Ga0222714_102142123	3300021961	Estuarine Water	MSLEKEILGFTNWLYANNWKLIGDGMCLNLETKAIGYINELMVEYKN
Ga0181354_10735262	3300022190	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKAIGRIDELMVEYNK
Ga0181354_11761134	3300022190	Freshwater Lake	INMTMEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYKK
Ga0181354_12252011	3300022190	Freshwater Lake	MSLEKEILGFTNWLYINNWKLIGDGMCLNLETKAIGRIDELMVEYNK
Ga0181351_10358551	3300022407	Freshwater Lake	MEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK
Ga0181351_11465192	3300022407	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNIETKAIGRIDELMVEYNK
Ga0181351_11675012	3300022407	Freshwater Lake	MTMGQEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0214919_100600503	3300023184	Freshwater	MLLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGRIDELMVEYNK
Ga0214919_102168301	3300023184	Freshwater	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYIDELMIEYKK
Ga0214919_102852532	3300023184	Freshwater	MTTVQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYIEELMVEYKN
Ga0214919_105494402	3300023184	Freshwater	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGRIDELMVEYNK
Ga0244775_1004028710	3300024346	Estuarine	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKK
Ga0244775_100934694	3300024346	Estuarine	MSLEKEILGFTNWLYTNNWKLIGDGMCLNLETKAIGRIDELMVEYKN
Ga0244775_101805401	3300024346	Estuarine	MSLEKEILGFTNWLYANNWKLIGDGMCLNLETKAIGRIDELMVEYNK
Ga0244775_105546511	3300024346	Estuarine	MEQEILGFTNWLYINNWKLIGDGMCLNTETKEIGYINELMVEYKK
Ga0209135_11662441	3300027642	Freshwater Lake	LCQKLIDMTTAQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYIEELMVEYKK
Ga0209769_10911401	3300027679	Freshwater Lake	MEQEILGFTNWLYTNNWKLIGDGMCLNLETKAIGYIDELMVEYKK
Ga0209443_13081652	3300027707	Freshwater Lake	MTTAQDILGFTNWLYNNNWKLIGDGMCLNLETKAIGYIDELMVEYKK
Ga0209442_10608452	3300027732	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0209596_10173528	3300027754	Freshwater Lake	MSLEKEILGFTNWLYINNWKLIGDGMCLNTETKAIGRIDELMVEYKK
Ga0209444_100889072	3300027756	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYNK
Ga0209296_11079505	3300027759	Freshwater Lake	MSLEKEILGFTNWLYANNWKLIGDGMCLNTETKAIGYIDELMVEYNK
Ga0209770_102317402	3300027769	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYINELMVEYNK
Ga0209500_101010885	3300027782	Freshwater Lake	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKEIGYIEELMVEYKK
Ga0209353_102134422	3300027798	Freshwater Lake	MGQEILGFTNWLYTNNWKLIGAGMCLNTETKAIGYIDELMVEYNK
Ga0209229_100513136	3300027805	Freshwater And Sediment	MEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKN
Ga0209230_1000075934	3300027836	Freshwater And Sediment	MEQEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELMVEYKKYKL
Ga0209230_100508236	3300027836	Freshwater And Sediment	YSYLCQKLIDMTTAQDILGFTNWLYNNNWKLIGDGMCLNLETKAIGYIEELMVEYKK
Ga0209230_105077053	3300027836	Freshwater And Sediment	MEQEILGFTNWLYTNNWKLIGAGMCLNTETKMIGRIDELMVEYNK
Ga0209230_106858632	3300027836	Freshwater And Sediment	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKEIGCIDELMVEYNK
Ga0209550_103316904	3300027892	Freshwater Lake	MSLEKEILGFTNWLYTNNWKLIGDGMCLNTETKAIGYIDELM
Ga0209668_110089072	3300027899	Freshwater Lake Sediment	MEQDILGFTNWLYINNWKLIGDGMCLNIKTKDIGYINELMVEYELIAEYKE
Ga0209191_10045793	3300027969	Freshwater Lake	MSLEKEILGFTNWLYANNWKLIGDGMCLNTETKAIGYINELMVEYKN
Ga0315907_101775882	3300031758	Freshwater	MTMEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK
Ga0315899_114302253	3300031784	Freshwater	LCQKLIDMTMEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK
Ga0315900_102605821	3300031787	Freshwater	MEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK
Ga0315290_107154172	3300031834	Sediment	MTTAEEILGFTNWLYNNNWKLIGDGMCLNTETKAIGYIDELMVEYKN
Ga0315909_100950468	3300031857	Freshwater	MEQEMLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKN
Ga0315904_100834563	3300031951	Freshwater	MTMEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK
Ga0315278_117031701	3300031997	Sediment	MTTAEEILGFTNWLYNNNWKLIGDGMCLNTETKKVSKITELVNQ
Ga0315274_102554612	3300031999	Sediment	MTLEKELLDFTNWLYNNNWKLIGDGMCLNTETKAIGYIDELMVEYKN
Ga0315906_108057441	3300032050	Freshwater	MLGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK
Ga0315906_109820292	3300032050	Freshwater	MEQEILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMTEYKK
Ga0315905_105623421	3300032092	Freshwater	MTTAQDILGFTNWLYINNWKLIGDGMCLNLETKAIGYINELMVEYKN
Ga0315903_101652843	3300032116	Freshwater	MTTTEEILGFTNWLYINNWKLIGDGMCLNLETKAIGYVNELMVEYNK
Ga0334991_0228821_2_124	3300034013	Freshwater	LGFTNWLYTNNWKLIGDGMCLNLETKAIGRIDELMVEYKN
Ga0335031_0820052_1_108	3300034104	Freshwater	WLYANNWKLIGDGMCLNLETKSIGYINELMVEYNK