Metagenome / Metatranscriptome Family F081325

Overview

Basic Information

• Family ID: F081325
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 114
• Average Sequence Length: 48 residues
• Representative Sequence: MSGTPADKSPGITGFIEIFEGRLNKMKLHLKEELGKAKHDRDRKA
• Number of Associated Samples: 87
• Number of Associated Scaffolds: 114

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 81.48 %
• % of genes near scaffold ends (potentially truncated): 23.68 %
• % of genes from short scaffolds (< 2000 bps): 21.93 %
• Associated GOLD sequencing projects: 81
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (78.070 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (22.807 % of family members)
• Environment Ontology (ENVO): Unclassified (64.912 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (64.035 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 45.21%
  β-sheet: 0.00%
  Coil/Unstructured: 54.79%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF04434	SWIM	6.14
PF14083	PGDYG	3.51
PF01025	GrpE	2.63
PF14743	DNA_ligase_OB_2	1.75
PF11750	DUF3307	1.75
PF00768	Peptidase_S11	1.75
PF00487	FA_desaturase	0.88
PF07883	Cupin_2	0.88
PF00149	Metallophos	0.88
PF01227	GTP_cyclohydroI	0.88
PF01661	Macro	0.88
PF09414	RNA_ligase	0.88
PF04325	DUF465	0.88
PF16473	Rv2179c-like	0.88
PF13772	AIG2_2	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	6.14
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	6.14
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	6.14
COG0576	Molecular chaperone GrpE (heat shock protein HSP-70)	Posttranslational modification, protein turnover, chaperones [O]	2.63
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.75
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.88
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.88
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
All Organisms	root	All Organisms	21.93 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Viruses	superkingdom	All Organisms → Viruses	21.93 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	18.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.51 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	18.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.51 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	18.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.51 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.51 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	17.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.51 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.51 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002363|B570J29624_101135	All Organisms → Viruses → Predicted Viral	2047
3300002408|B570J29032_109030036	Not Available	572
3300003388|JGI25910J50241_10143625	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	625
3300003497|JGI25925J51416_10026140	All Organisms → Viruses → Predicted Viral	1698
3300005581|Ga0049081_10032936	All Organisms → Viruses → Predicted Viral	1968
3300005581|Ga0049081_10054124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1517
3300006484|Ga0070744_10149237	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	671
3300007624|Ga0102878_1208605	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558
3300013372|Ga0177922_10135569	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	574
3300017723|Ga0181362_1033769	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1087
3300020141|Ga0211732_1203246	Not Available	530
3300020162|Ga0211735_11220149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	830
3300020172|Ga0211729_11343093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1306
3300020205|Ga0211731_11070830	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1073
3300024346|Ga0244775_10214047	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1614
3300027224|Ga0208164_1056935	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	691
3300027608|Ga0208974_1046043	All Organisms → Viruses → Predicted Viral	1266
3300027608|Ga0208974_1101922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	765
3300027659|Ga0208975_1104282	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	821
3300027744|Ga0209355_1194414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	834
3300027797|Ga0209107_10102981	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1526
3300027797|Ga0209107_10170398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1097
3300027805|Ga0209229_10209685	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	872
3300034082|Ga0335020_0203723	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	988
3300034093|Ga0335012_0064271	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2099
3300034110|Ga0335055_0340961	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	631
3300034117|Ga0335033_0164659	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1223

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.33%
Marine	Environmental → Aquatic → Marine	16.67%

Type

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	38.60%
Lake	Environmental → Aquatic → Freshwater → Lake	37.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.39%
River	Environmental → Aquatic → Freshwater → River	3.51%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.63%
Coastal	Environmental → Aquatic → Marine → Coastal	1.75%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.88%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.96%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	34.21%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	10.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.51%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.63%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.75%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.88%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	22.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.54%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.16%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	10.53%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	8.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.51%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.51%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.51%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.75%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.75%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.75%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.75%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.75%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.88%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.88%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.88%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002363	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion	Environmental
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental
3300003754	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion (Metagenome Metatranscriptome)	Environmental
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental
3300004765	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental
3300007954	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2um	Environmental
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental
3300024346	Whole water sample coassembly	Environmental
3300024348	0.2um to 3um size fraction coassembly	Environmental
3300027125	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8h	Environmental
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental
3300027146	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0h	Environmental
3300027186	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes)	Environmental
3300027224	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes)	Environmental
3300027595	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8h	Environmental
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental
3300027642	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (SPAdes)	Environmental
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29624_1011358	3300002363	Freshwater	MSESTGITGFIEIFEGRLTKMKLHLKEELNKAKHERDRKAIKRITADARKLNKTLKEMRN
B570J29032_1090300364	3300002408	Freshwater	MSSGTPPSSSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRD
B570J29032_1096845554	3300002408	Freshwater	MSGTPADKSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRD
B570J40625_1012629061	3300002835	Freshwater	MSGTPADKGPGITGFIEIFEGRLNKMKLHLKEELAKAKNDRDRKAIQRIT
JGI25910J50241_101436251	3300003388	Freshwater Lake	MSESAGITGFIEIFEGRLTKMKLHLKAELSKDKHERNRKWLKIQLR
JGI25920J50251_101465312	3300003404	Freshwater Lake	MNGTPSSSSPGISGFIEIFDGRLNKMKLHLKEELSKAKHDRDRKAISRIIADARKLNKTL
JGI25925J51416_100261404	3300003497	Freshwater Lake	MSSTPANSSPGITGFIEIFEGRLNKMKLHLKQELTKAKHERDKQAIKR
Ga0005853_10426144	3300003754	Freshwater And Sediment	MSGTPADKGPGITGFIEIFEGRLTKMKLHLKEELGKAKNDRDRKAIRRITADARKLNR
Ga0066177_103683352	3300004096	Freshwater Lake	MSTESTGITGFIEIFEGRLTKMKLHLKTELSKDKHDRNRKWLKTQLRDAS
Ga0007745_13787813	3300004765	Freshwater Lake	MSSSTGITGFIEIFEARLQKMKLHLKEELSKAKGDRNRKAIRHMLADARKLN
Ga0068872_102262541	3300005528	Freshwater Lake	MNGTPSSSSPGISGFIEIFDGRLNKMKLHLKEELTKAKHDRDRKAISRIIADARKLNKTLKEM
Ga0049081_100329361	3300005581	Freshwater Lentic	MSDSVGITGFIEIFEGRLQKMKHHLKEELEKAKHERDR
Ga0049081_100541246	3300005581	Freshwater Lentic	MNSHSSTGVTGFIEIFEGRLNKMKLRLKEELSKVKHERDKKTIKRIVADA
Ga0049081_100728425	3300005581	Freshwater Lentic	MNSHSSTGVTGFIEIFEGRLNKMKLHLKAELSKVKHERDKKTIKRIVADARKL
Ga0049080_102047673	3300005582	Freshwater Lentic	MSGTPADKGPGITGFIEIFEGRLNKMKLHLKTELSKDKHDR
Ga0049082_100099937	3300005584	Freshwater Lentic	MSGTPASSSPGITGFIEIFEGRLNKMKLHLKTELSKDKHDRN
Ga0049082_102940261	3300005584	Freshwater Lentic	MSGTPTDKGPGITGFIEIFESRLNKMKLHLKEELTKAKSDRDRK
Ga0078894_112591483	3300005662	Freshwater Lake	MSGTLASSSPGITGFIEIFEGRLNKMKLHLKEELSKSKGERNRKLIK
Ga0078894_115909861	3300005662	Freshwater Lake	MNGTPASSSPGISGFIEIFDGRLNKMKLHLKEELGKAKHDRDRKAIRRI
Ga0078894_117121413	3300005662	Freshwater Lake	MNGTPMDKGPGITGFIEIFEGRLNKMKLHLKEELGKAKHDRDRK
Ga0070744_101492373	3300006484	Estuarine	MSSSTSITGFIEIFEGRLDKMKLRLKEELSKAKHERDKKAIRRT
Ga0102817_10414254	3300007555	Estuarine	MNGTPASSSPGITGFIEIFEGRLNKMKLHLKEELSK
Ga0102828_10358371	3300007559	Estuarine	MNGTPTSSSPGITGFIEIFEGRLNKMKLHLKEELSKAKGERDRKAIRR
Ga0102915_12753703	3300007562	Estuarine	MSGTPTSSSPGITGFIEIFEGRLNKMKLHLKEELSKVKSDR
Ga0102915_12898311	3300007562	Estuarine	MNGTPASSSPGITGFIEIFDGRLNKMKLHLKEELGKAKHDRDRKA
Ga0102863_10227238	3300007622	Estuarine	MSSSNSITGFIEIFEGRLDKMKLRLKEELSKAKHERDKKAIRRTVTDARKLNKTLKEM
Ga0102878_12086053	3300007624	Estuarine	MKVDRIDPASSSPGITGFIEIFEGRLNKMKLHLKEELGKAKHDRDRKAIRRITADARK
Ga0105739_10918082	3300007954	Estuary Water	MNSHSSTGVTGFIEIFESRLNKMKLHLKAELSKVKHERDKKTIKRIVADARKLNKTLK
Ga0105747_11098114	3300007974	Estuary Water	MSSSNSITGFIEIFEGRLDKMKLRLKEELSKAKHERDKKAIRRTVTDARKLNK
Ga0114346_11140851	3300008113	Freshwater, Plankton	MNATPADKSPGITGFIEIFEGRLNKMKLHLKAELGKAKHDRDRK
Ga0114336_10241185	3300008261	Freshwater, Plankton	MSGTPADKSPGITGFIEIFEGRLNKMKLHLKEELGKAKHDRDRKA
Ga0102830_12032031	3300009059	Estuarine	MSGTPAGSSPGITGFIEIFEGRLNKMKLHLKAELSKAKHERDKQAVKRIV
Ga0114962_100826231	3300009151	Freshwater Lake	MSGTPASNSPGITGFIEIFEGRLAKMKIHLKEELNKAKSDRDRKNMRRLTSDARKLN
Ga0114966_106402323	3300009161	Freshwater Lake	MSGTPAGSSPGITGFIEIFEGRLNKMKLHLNAELRKDKH
Ga0114964_102649913	3300010157	Freshwater Lake	MSESTGITGFIEIFEGRLAKMKLHLKEELGKAKSDRDRKNMRRLTSDARKLNRTLKEM
Ga0153799_10516644	3300012012	Freshwater	MSGTPASSSPGITGFIEIFEGRLNKMKLHLKTELSKDKHDRNRKWLKIQLRDANKLKL
Ga0157210_10543523	3300012665	Freshwater	MSGTPASSSPGITGFIEIFESRLVKMKLHLKAELGKS
Ga0164292_110493392	3300013005	Freshwater	MSGTPADSGPGITGFIEIFEGRLTKMKLHLKEELDK
Ga0164296_10722611	3300013093	Freshwater	MSDSHGVTGFIEIFQGKLDRMKLHLKRELEKSKHERDRKLIKRQLTD
Ga0177922_101355692	3300013372	Freshwater	MANNTGITGFIEIFEGRLTKMKLHLKEELGKAKNDRDRKAIRRITADARKLNK
Ga0177922_1047848912	3300013372	Freshwater	MSGTPADKGPGITGFIEIFEGRLAKMKLHLKTELNKDKHDRNRKWLK
Ga0177922_104791943	3300013372	Freshwater	MSTESTGITGFIEIFEGRLTKMKLHLKTELSKDKHDRNR
Ga0181362_10337695	3300017723	Freshwater Lake	MSESAGITGFIEIFEGRLTKMKLHLKAELSKDKHERN
Ga0181343_10665625	3300017766	Freshwater Lake	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKTKHDRDRKAIRRIISDARKLNKTLKE
Ga0181357_12860703	3300017777	Freshwater Lake	MSSSTGITGFIEIFEGRLQKMKLHLKEELDKVKSDRDRKSIRRITADARKLNKTLKEM
Ga0181349_11984291	3300017778	Freshwater Lake	MSESAGITGFIEIFEGRLTKMKLHLKAELSKAKSDRNRKAIR
Ga0181346_12807882	3300017780	Freshwater Lake	MNSHSSTGVTGFIEIFEGRLNKMKLHLKAELSKVKHERDKKTIKRIVADARK
Ga0211732_12032463	3300020141	Freshwater	MSSGTPPSSSPGITGFIEIFDGRLNKMKLHLKEELGKAKHDRDRKAIRRIITDARKLNK
Ga0211736_104486401	3300020151	Freshwater	MSGTPASSSPGITGFIEIFEGRLNKMKLHLKEELSKAKHDRDRKAIRRFTAD
Ga0211736_106260393	3300020151	Freshwater	MSGITGFIEIFEGRLNKMKLHLKEELTKTKSDRDRKSIRRSIADARKL
Ga0211733_104255604	3300020160	Freshwater	MSGTPADNSPGITGFIEIFEGRLNKMKLHLKEELGKAK
Ga0211726_103418737	3300020161	Freshwater	MSGTPADKSPGITGFIEIFEGRLAKMKLHLKEELGKAK
Ga0211735_112201494	3300020162	Freshwater	MSGTPASPSPGITGFIEIFEGRLNKMKLHLKEELSKAKHDRDRKAIRRFTADARKLNRT
Ga0211729_109444043	3300020172	Freshwater	MSGTPASSSPGITGFIEIFEGRLTKMKLHLKEELGKAKS
Ga0211729_110808511	3300020172	Freshwater	MNSHPSNGVTGFIEIFEGRLNKMKLRLKEELSKVKHERDKKTIK
Ga0211729_113430935	3300020172	Freshwater	MSGTPASSSPGISGFIEIFDGRLNKMKLHLKEELGKAKHDRDRKAIRRITTDARKLNKTLKE
Ga0211731_101180843	3300020205	Freshwater	MSGTPSNSTPGITGFIEIFEGRLNKMKLHLKQELSKAKHERDKQAIKRIVT
Ga0211731_110708301	3300020205	Freshwater	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKAKDDRDRKA
Ga0210307_12023271	3300021336	Estuarine	MNGTPADKGPGITGFIEIFEGRLNKMKLHLKEELGKAKSDRNRKLIKSQLADAKKLNR
Ga0222713_108253092	3300021962	Estuarine Water	MSSNTSGITGFIEIFEGRLDKMKLHLKEELGKAKHERDKKAIR
Ga0214919_105843633	3300023184	Freshwater	MSDTTGLTGFLEIFEGRLQKMKLHLKAELSKAKHERDRNMIKRQLADARKLN
Ga0244775_102140471	3300024346	Estuarine	MSSATGFVEIFEGRLNKMKLHLKEELSKAKGERDRKAIRRITADAKKLNKTLKEMRNA
Ga0244775_106522411	3300024346	Estuarine	MNGTPTSSSPGITGFIEIFEGRLNKMKLHLKEELSKAKGDRDRK
Ga0244776_104399931	3300024348	Estuarine	MSDSTGITGFIEIFEGRLQKMKLHLKQELSKAKHERDKAA
Ga0244776_109325611	3300024348	Estuarine	MSSSNSITGFIEIFEGRLDKMKVRLKEELSKAKHERDKKAI
Ga0255106_10489191	3300027125	Freshwater	MSGIPASSSPGITGFIEIFEGRLAKMMIHLKAELNKDKHDRNRKWL
Ga0255114_10356751	3300027145	Freshwater	MSASNGITGFIEIFEGRLDKMKLHLKEELAKAKHERDRKSIRR
Ga0255104_10639182	3300027146	Freshwater	MSASNGITGFIEIFEGRLDKMKLHLKEELAKAKHERDRKSIRRLT
Ga0208797_10094936	3300027186	Estuarine	MSESTGITGFIEIFEGRLNKMKLHLKEELSKAKSDRDRKAIRRITADAKKLN
Ga0208164_10569354	3300027224	Estuarine	MSSSNSITGFIEIFEGRLDKMKLRLKEELSKAKHERDKK
Ga0255122_100085917	3300027595	Freshwater	MNGTPSSSSPGISGFIEIFDGRLNKMKLHLKEELTKAKHDRDRKAIR
Ga0208974_10460431	3300027608	Freshwater Lentic	MSDSVGITGFIEIFEGRLQKMKHHLKEELEKAKHERDRKSIRRILYDARKLNKTIKEMRN
Ga0208974_10690421	3300027608	Freshwater Lentic	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKTKHDRDRKAIRR
Ga0208974_11019221	3300027608	Freshwater Lentic	MSGAGITGFIEIFEGRLNKMKLHLKEELGKAKSDRDRKSI
Ga0208133_10193841	3300027631	Estuarine	MSGTPASSSPGITGFIEIFEGRLNKMKMHLKAELGKAKHERDRK
Ga0209135_11308774	3300027642	Freshwater Lake	MSSGTPPSSSPGITGFIEIFEGRLNKMKLHLKEELGKAKHDRDRK
Ga0209356_11124003	3300027644	Freshwater Lake	MSSSTGITGFIEIFEARLQKMKLHLKEELSKAKGDRNRKAIRHM
Ga0209357_11628421	3300027656	Freshwater Lake	MSTESTGITGFIEIFEGRLTKMKLHLKTELSKDKHDRNRKWLKTQLRDASKLK
Ga0208975_11042823	3300027659	Freshwater Lentic	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKTKHD
Ga0209551_10882321	3300027689	Freshwater Lake	MNGTPASSSPGITGFIEIFEGRLNKMKLHLKEELSKAKGERDRKAIRRITADAKK
Ga0209355_11944141	3300027744	Freshwater Lake	MSSSTGITGFIEIFEGRLQKMKLHIKEELDKVKSDRDRKSIRRITSDARKLNKTLKEMRHAS
Ga0209768_102737171	3300027772	Freshwater Lake	MSGTPADKGPGITGFIEIFEGRLAKMKLHLKTELNKDKHDRNRKWLKTQLRDA
Ga0209768_103424131	3300027772	Freshwater Lake	MSSSTGITGFIEIFEGRLQKMKLHIKEELDKVKSDRDRKSIRRITADARKLNKTLKEMR
Ga0209500_101903684	3300027782	Freshwater Lake	MSGTPADKGPGITGFIEIFEGRLTKMKLHLKAELSKDK
Ga0209246_1000060522	3300027785	Freshwater Lake	MSGTPANSSPGITGFIEIFEGRLNKMKLHLKQELTKAKHERDKQ
Ga0209246_100104451	3300027785	Freshwater Lake	MSDSVGITGFIEIFEGRLQKMKHHLKEELEKAKHERDRK
Ga0209107_101029816	3300027797	Freshwater And Sediment	MSGTPASSSPGITGFIEIFEGRLNKMKLHLKAELGKV
Ga0209107_101703981	3300027797	Freshwater And Sediment	MSGTPASSSPGITGFIEIFEGRLNKMKLHLKAELGKVK
Ga0209229_102096854	3300027805	Freshwater And Sediment	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKTKHDRDRKAIRRIISDARKLNKT
Ga0209354_103631491	3300027808	Freshwater Lake	MSGTPAGSSPGITGFIEIFEGRLNKMKLHLKAELSKAKHERDKQAIKRIVVDAR
Ga0209354_103854121	3300027808	Freshwater Lake	MNGTPASSSPGITGFIEIFDGRLNKMKLHLKEELGKAKHDRDRKAIRRIIADARKL
Ga0209550_105438714	3300027892	Freshwater Lake	MSSATGFVEIFEGRLNKMKLHLKEELGKAKHDRDR
Ga0315899_100959561	3300031784	Freshwater	MSGTPASSSPGITGFIEIFEGRLNKMKLHLKEELGKAKSDRDRKAIRRLTADARKLNKTL
Ga0315901_101846117	3300031963	Freshwater	MSESTGITGFIEIFEGRLTKMKLHLKEELDKAKNERDRKA
Ga0315905_106937983	3300032092	Freshwater	MNATPADKSPGITGFIEIFEGRLNKMKLHLKAELGKAKHDRDRKMIKSQL
Ga0315268_109097571	3300032173	Sediment	MSGTPADKSPGITGFIEIFEGRLNKMKLHLKEELSKVKSDRDRKAIRRITADARKLNKTLKE
Ga0315271_114596223	3300032256	Sediment	MNGTPVSGSPGITGFIEIFEGRLNKMKLHLKEELGKVKSDRNRKWIKNQLSDA
Ga0335003_0500161_381_500	3300033995	Freshwater	MNGTPADKSPGITGFIEIFEGRLNKMKLHLKEELSKAKHD
Ga0335020_0203723_3_191	3300034082	Freshwater	MSGTPASSSPGISGFIEIFEGRLNKMKLHLKEELSKAKGERDRKSIRRIIADARKLNKTLKGM
Ga0335020_0244025_766_888	3300034082	Freshwater	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKTKHDRDRKA
Ga0335020_0365833_3_140	3300034082	Freshwater	MSSGTPPSSSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRDRKS
Ga0335012_0064271_1989_2099	3300034093	Freshwater	MSGTPADKSPGITGFIEIFEGRLNKMKLHLKEELGKA
Ga0335012_0250356_1_138	3300034093	Freshwater	MSGTPADKSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRDRKSI
Ga0335029_0229752_2_118	3300034102	Freshwater	MSSGTPPSSSPGITGFIEIFEGRLQKMKLHLKEELGKAK
Ga0335035_0460793_543_704	3300034105	Freshwater	MSGTPADKSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRDRKSIRRIIADSR
Ga0335036_0811447_418_540	3300034106	Freshwater	MSGAGITGFIEIFEGRLNKMKLHLKEELGKAKSDRDRKSIR
Ga0335055_0260383_607_750	3300034110	Freshwater	MNVTPADKSPGITGFIEIFEGRLNKMKLHLKAELGKAKHDRDRKLIKS
Ga0335055_0340961_1_132	3300034110	Freshwater	MSGTPASSSPGITGFIEIFEGRLNKMKLHIKEELSKSKGDRNKN
Ga0335033_0164659_2_175	3300034117	Freshwater	MSGAGITGFIEIFEGRLNKMKLHLKEELTKAKSDRDRKAIRRITTDARKLNKTLKEMR
Ga0335033_0273882_1_177	3300034117	Freshwater	MANSSTGITGFIEIFEGRLNKMKLHLKEELTKAKHDRDRKAIRRIISDARKLNKTLKEM
Ga0335058_0298465_778_933	3300034121	Freshwater	MSGTPSSSSPGITGFIEIFEGRLNKMKLHLKEELGKAKHDRDRKAIRRITAD
Ga0335013_0384568_2_136	3300034284	Freshwater	MKTSGTPSSSSPGITGFIEIFEGRLNKMKLHLKEELSKAKHERNR
Ga0335048_0008561_7592_7759	3300034356	Freshwater	MSSGTPPSSSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRDRKSIRRIIADSRK
Ga0335048_0415953_498_662	3300034356	Freshwater	MSGTPADKSPGITGFIEIFEGRLQKMKLHLKEELGKAKHDRDRKSIRRIIADSRK