Metagenome / Metatranscriptome Family F081274

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081274
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	143 residues
Representative Sequence	VTRSPWAVLALALLDGAIGAVLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARAGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLS
Number of Associated Samples	99
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.85 %
% of genes near scaffold ends (potentially truncated)	48.25 %
% of genes from short scaffolds (< 2000 bps)	85.09 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.123 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.158 % of family members)
Environment Ontology (ENVO)	Unclassified (37.719 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 72.94% β-sheet: 0.00% Coil/Unstructured: 27.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transporters	d3mkua_	3mku	0.62549
f.38.1.2: LacY-like proton/sugar symporter	d6vbga_	6vbg	0.62012
a.26.1.1: Long-chain cytokines	d3n0pa_	3n0p	0.61231
a.26.1.1: Long-chain cytokines	d1huwa_	1huw	0.61168
a.102.1.0: automated matches	d3wkga_	3wkg	0.60526

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF07969	Amidohydro_3	21.93
PF01979	Amidohydro_1	9.65
PF00171	Aldedh	7.89
PF00923	TAL_FSA	3.51
PF13377	Peripla_BP_3	3.51
PF01797	Y1_Tnp	1.75
PF03916	NrfD	0.88
PF08044	DUF1707	0.88
PF05995	CDO_I	0.88
PF13673	Acetyltransf_10	0.88
PF13248	zf-ribbon_3	0.88
PF02775	TPP_enzyme_C	0.88
PF07366	SnoaL	0.88
PF00440	TetR_N	0.88
PF13147	Obsolete Pfam Family	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	7.89
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	7.89
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	7.89
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	3.51
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.75
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	74.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	54.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig173672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
2170459015\|G14TP7Y02JWDBW	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105701584	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300001532\|A20PFW1_1011953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300001532\|A20PFW1_1149599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300001534\|A15PFW1_10016779	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300001534\|A15PFW1_10207586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300001535\|A3PFW1_10490666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300001537\|A2065W1_10036383	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300001538\|A10PFW1_10029497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300001538\|A10PFW1_10396375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300002568\|C688J35102_118428341	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300002568\|C688J35102_120982022	All Organisms → cellular organisms → Bacteria	5108	Open in IMG/M
3300002906\|JGI25614J43888_10173367	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300004081\|Ga0063454_100951340	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300004153\|Ga0063455_100463159	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300004479\|Ga0062595_100491425	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005177\|Ga0066690_10465589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300005327\|Ga0070658_10095226	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300005327\|Ga0070658_10558723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991	Open in IMG/M
3300005330\|Ga0070690_100985662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300005336\|Ga0070680_100038264	All Organisms → cellular organisms → Bacteria	3880	Open in IMG/M
3300005337\|Ga0070682_101123836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300005337\|Ga0070682_101453064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300005339\|Ga0070660_100598476	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005344\|Ga0070661_100209393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1492	Open in IMG/M
3300005355\|Ga0070671_100273995	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300005356\|Ga0070674_101896471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300005436\|Ga0070713_101861812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300005444\|Ga0070694_100107095	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300005458\|Ga0070681_10139837	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300005530\|Ga0070679_100512241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300005536\|Ga0070697_101459855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300005547\|Ga0070693_101121086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300005563\|Ga0068855_100032551	All Organisms → cellular organisms → Bacteria	6224	Open in IMG/M
3300005568\|Ga0066703_10123006	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300005616\|Ga0068852_102597129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005718\|Ga0068866_10585457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300005764\|Ga0066903_103068446	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300006058\|Ga0075432_10581749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300006638\|Ga0075522_10161958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300006881\|Ga0068865_100972025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300007819\|Ga0104322_136112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1873	Open in IMG/M
3300009088\|Ga0099830_11019278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	686	Open in IMG/M
3300009090\|Ga0099827_11092084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300009093\|Ga0105240_11321977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300009162\|Ga0075423_10142555	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300009176\|Ga0105242_10237936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300009660\|Ga0105854_1001130	All Organisms → cellular organisms → Bacteria	11025	Open in IMG/M
3300009661\|Ga0105858_1016059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1989	Open in IMG/M
3300011987\|Ga0120164_1003488	All Organisms → cellular organisms → Bacteria	3898	Open in IMG/M
3300011994\|Ga0120157_1098089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300012003\|Ga0120163_1000901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20172	Open in IMG/M
3300012003\|Ga0120163_1090598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300012096\|Ga0137389_10769654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300012203\|Ga0137399_11687203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300012210\|Ga0137378_11729340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300012211\|Ga0137377_10366431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1378	Open in IMG/M
3300012212\|Ga0150985_111826468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300012212\|Ga0150985_114452280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012469\|Ga0150984_112608239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300012685\|Ga0137397_10342348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1114	Open in IMG/M
3300012922\|Ga0137394_11118007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300012923\|Ga0137359_10239717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300012951\|Ga0164300_10880838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300012951\|Ga0164300_11206851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012955\|Ga0164298_10041012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2159	Open in IMG/M
3300012955\|Ga0164298_10060184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1866	Open in IMG/M
3300012957\|Ga0164303_10279509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300012957\|Ga0164303_10860738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300012960\|Ga0164301_10061741	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300012985\|Ga0164308_12241982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300012987\|Ga0164307_11605724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300012988\|Ga0164306_10420472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300013104\|Ga0157370_10752876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300013105\|Ga0157369_10386576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300013296\|Ga0157374_10401584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M
3300013765\|Ga0120172_1056237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1005	Open in IMG/M
3300014820\|Ga0120160_1061518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300015052\|Ga0137411_1356020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2618	Open in IMG/M
3300015203\|Ga0167650_1064132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300018468\|Ga0066662_10006559	All Organisms → cellular organisms → Bacteria	5778	Open in IMG/M
3300019888\|Ga0193751_1228001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300020070\|Ga0206356_11392380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359	Open in IMG/M
3300020070\|Ga0206356_11677753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300020081\|Ga0206354_11188737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300020082\|Ga0206353_10882543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300021363\|Ga0193699_10035937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1875	Open in IMG/M
3300021363\|Ga0193699_10042955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1728	Open in IMG/M
3300024283\|Ga0247670_1045610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300024288\|Ga0179589_10090970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300024331\|Ga0247668_1010469	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1933	Open in IMG/M
3300024347\|Ga0179591_1019432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2902	Open in IMG/M
3300025899\|Ga0207642_10415507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300025909\|Ga0207705_10436829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300025912\|Ga0207707_10074732	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300025915\|Ga0207693_11080497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300025917\|Ga0207660_10242853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300025917\|Ga0207660_10417740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300025919\|Ga0207657_10012872	All Organisms → cellular organisms → Bacteria	8228	Open in IMG/M
3300025919\|Ga0207657_10602005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300025935\|Ga0207709_10269139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300025937\|Ga0207669_11277978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300025949\|Ga0207667_10058284	All Organisms → cellular organisms → Bacteria	4051	Open in IMG/M
3300026221\|Ga0209848_1016741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1441	Open in IMG/M
3300026304\|Ga0209240_1172945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300026319\|Ga0209647_1075889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300028799\|Ga0307284_10040973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1594	Open in IMG/M
3300028872\|Ga0307314_10064261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300031251\|Ga0265327_10399718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300031938\|Ga0308175_100929688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300032205\|Ga0307472_102682634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300034195\|Ga0370501_0194499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.56%
Host-Associated	Host-Associated	24.56%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.56%
Plants	Host-Associated → Plants	24.56%
Solid Waste	Engineered → Solid Waste	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.02%
Grass	Engineered → Solid Waste → Grass	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.51%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.88%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	12.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.02%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.51%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.88%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014820	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0.25M	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_04436980	2140918008	Soil	LTRSPLEVFLLALFDSVVGGAVLWAALDHGAHRDVLVHFFVYGAIILAFKARDAARRLPTLITQARAGTRVVLSPGWLRVARLLIGYDSWSRTERVGIAGISVIVCLLFGWARGGPFAAALFLAVATVDGALALVAWGARLTR
4PV_02849300	2170459015	Switchgrass, Maize And Mischanthus Litter	NGEPVTFTPLTRSPWAVLALALLDSTVGAAFLAEALRHGTRRDVLAHFFVYLAIXFAFKARDAARRLPALVAQARAANGLLLTGPWWMRTTRALIGYDSWSRTERFGIVVISIIVTMLFGWAKGGPFAAALFIAVAAVNAGLALVALAARFAGRL
INPhiseqgaiiFebDRAFT_1057015844	3300000364	Soil	MTRSPWSVLALALLDGTIGALILREAIEHGDRRAVLAQFFLYVTIIFAFKARDAARRLPALVAQSRTSDSLLLAGPWWVRTLRALFGYDSWSRTERLAIIVIAIVVTSLFGWARGGPFAAALFVAVAVVDGLLALVALAARASRPRT*
A20PFW1_10119532	3300001532	Permafrost	VTRSPLSVLLLALLDGALGAGALALALSHGGHRDVLVHFVVYLLVIGLFKARDAARRLPALVAQARSAGGTLSLGPLWLRTTRLLIGYDSWSRTERLGMVSISTIVILLFGWDDGGPFAAALFVAVAAVDTALALVALGARLTAR*
A20PFW1_11495992	3300001532	Permafrost	ADDTARQARHVHTVTRSPWAVLALALLDGAIGAAVLAEALSHGRHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARTNTKLLLGPWWLQTARLLIGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSTSRG*
A15PFW1_100167792	3300001534	Permafrost	VTRSPLSVLLLALLDGALGAGALALALSHGGHRDVLVHFVVYLLVIGLFKARDAARRLPALVAQARSAGGTLSLGPLWLRTTRLLIGYDSWSRTERLGMVSISTIVILLFGWDDGGPFAAALFVAVAAVDAALALVALGARLTAR*
A15PFW1_102075862	3300001534	Permafrost	VTRSPWAVLALALLDGAIGAAVLAEALSHGRHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARTNTKLLLGPWWLQTARLLIGYDSWSRTERLGIIVVSVIVTTLFGLAKGGPFA
A3PFW1_104906662	3300001535	Permafrost	VTRSPLSVLALALLDGAIGAVLLSEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSNTELLLGPWWLRTARLLVGYDSWSRTERLAIIVVSLLVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSSARG*
A2065W1_100363833	3300001537	Permafrost	RPHCSVSQSRSHHGLKIVTRSPLSVLALALLDGAIGAVLLSEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSNTELLLGPWWLRTARLLVGYDSWSRTERLAIIVVSLLVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSSARG*
A10PFW1_100294971	3300001538	Permafrost	RSHRGLKIVTRSPLSVLALALLDGAIGAVLLSEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSNTELLLGPWWLRTARLLVGYDSWSRTERLAIIVVSLLVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSSARG*
A10PFW1_103963752	3300001538	Permafrost	LSVLLLALLDGALGAGALALALSHGGHRDVLVHFVVYLLVIGLFKARDAARRLPALVAQARSAGGTLSLGPLWLRTTRLLIGYDSWSRTERLGMVSISTIVILLFGWDDGGPFAAALFVAVAAVDAALALVALGARLTAR*
C688J35102_1184283412	3300002568	Soil	VTRSPWSVLALALLDGAIGALILREAIEHGDRRGVLVQFFLYVTIVFAFKARDAARRLPILVAESRRGNDLLLAGPWWVRTTRALVGYDSWSRTERLAIIVIAVVVTSLFGWARGGPFAAALFIAVAVVDGMLAVVAL
C688J35102_1209820223	3300002568	Soil	VTRSPWAVLALALLDGAIGAALLAEALAHGERRDVLVHFFVYFGIVFVFKARDAARRIPALVRQARASTELLLGPWWLQTGRLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFLAVAIVNASLALVALGARLWAR*
JGI25614J43888_101733672	3300002906	Grasslands Soil	MTRSPWAVLALALLDGAIGGALLAAALSHGAHRDVLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAIVNAVLALIALGT
Ga0063454_1009513402	3300004081	Soil	VTRSPWSVLALALLDGAIGALILREAIEHGDRRGVLVQFFLYVTIVFAFKARDAARRLPILVAESRRGNDLLLAGPWWVRTTRALVGYDSWSRTERLAIIVIAVVVTSLFGWARGGPFAAALFIAVAVVDGMLAVVALAARASRPRA*
Ga0063455_1004631592	3300004153	Soil	VTRSPWAVLALALLDGAIGAALVAEALAHGGHRDVLVHFFVYVAIVFVFKAREAARRVPALIAQARGSTTLVLGPWWLRTTRALIGYDSWSRTERLGIVVISIIVTTLFGWAKGGPFAAALFIAVGAVNALLALVALAARASGPRR*
Ga0062595_1004914251	3300004479	Soil	VTRSPWAVLALALLDGAIGVALLVVAVQHGERRDVLAHFAVYALIVFAFKARDAARRVPALIGQARTGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFIAVAVVDAALALVALGARFAAPRG*
Ga0066690_104655893	3300005177	Soil	AVLTLALIDGAVAALILREAIQHGDRRSVLVQFFIYATVVFIFKARDAARRIPALVAQSRASDSLLLAGPWWVRTIRAVVGYDSWSRTERLGMIVIAIVVTVLFGWARGGPFAAALFASVAVVDGVLAVVALGARASRPRS*
Ga0070658_100952261	3300005327	Corn Rhizosphere	IGALLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSWRPRR*
Ga0070658_105587232	3300005327	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTPLFGPWWLLTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS*
Ga0070690_1009856621	3300005330	Switchgrass Rhizosphere	VAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVTGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0070680_1000382643	3300005336	Corn Rhizosphere	VTRSPWAVLALALLDGAIGALLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSWRPRR*
Ga0070682_1011238362	3300005337	Corn Rhizosphere	LLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0070682_1014530642	3300005337	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARNATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFVAVAIVNAAL
Ga0070660_1005984761	3300005339	Corn Rhizosphere	VTRSPWAVLALALLDGAIGAVLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARAGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIA
Ga0070661_1002093931	3300005344	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAA
Ga0070671_1002739953	3300005355	Switchgrass Rhizosphere	VLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0070674_1018964711	3300005356	Miscanthus Rhizosphere	IGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0070713_1018618121	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FLALLDGAIGAAILALALEHGPQRDVLVHFIVYALVIGLFKARDASRRLPALIAQARTSEGTLSFGPWWLRWTRLLIGYDSWSRTERLGMIAISTIVVLLFGWDDGGPFAAALFIAVASVDAALALIALIARLSARN*
Ga0070694_1001070952	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGALLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSSRPRR*
Ga0070681_101398371	3300005458	Corn Rhizosphere	ADDAARRARQLYAVTRSPWAVLALALLDGAIGALLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSSRPRR*
Ga0070679_1005122412	3300005530	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARNATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS*
Ga0070697_1014598551	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSPLAAFLLALLDGAIAGAILWAALAHGGNRDVLVHFTVYAGIVFAFKARDAARRLPVLVAQARASTSNSLLLAGPRWLRITRLLIGYDSWSRTERVGIVAISLIVCSLFGWARGGPFAAALFAAISVVNGVLALVAWGARLTMRSE
Ga0070693_1011210862	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGALLLAEAISHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARNATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFA
Ga0068855_1000325512	3300005563	Corn Rhizosphere	VTRSPWAVLALALLDGTIGALLLAEALSHGAHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSWRPRR*
Ga0066703_101230064	3300005568	Soil	MTRSPWAVLTLALIDGAVAALILREAIQHGDRRSVLVQFFIYATVVFIFKARDAARRIPALVAQSRASDSLLLAGPWWVRTIRAVVGYDSWSRTERLGMIVIAIVVTVLFGWARGGPFAAALFASVAVVDGVLAVVALGARASRPRS*
Ga0068852_1025971291	3300005616	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPNRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAGLFLAVAIVNAVLALIALATRLAARS*
Ga0068866_105854572	3300005718	Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0066903_1030684461	3300005764	Tropical Forest Soil	VTRSPWAVLALALLDGAVGAAFLAEALRHGARRDVLAHFVVYLAIVFAFKARDAARRLPTLVAQARAAHGLLLTGPWWLRTTRALVGYDSWSRTERFGIVVISIIVTMLFGWAKGGPFAAALFIAVATVNAGLALVALAARFAGRRL*
Ga0075432_105817491	3300006058	Populus Rhizosphere	VTRSPWAVLALALLDGAIGAAFLAEALRHGERRDVLAHFFVYFAIVFAFKARDAARRLPALVAQARGGTLLIAGPWWIRTARALVGYDSWSRTERFGIVVIAGIVTVLFGWSKGGPFAAALFLAVATVNAGLALVALAARFAGRRS*
Ga0075522_101619582	3300006638	Arctic Peat Soil	VTRSPLSVLALALLDGAIGAAVLAEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSHTELLLGPWWLRTARLLVGYDSWSRTERLAIIVVSVLVTTLFGWAKGGPFAAGLFSGVAIVNGALALIALGARLSVRRG*
Ga0068865_1009720251	3300006881	Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGVRI*
Ga0104322_1361122	3300007819	Permafrost Soil	VTRSPLSVLALALLDGAIGAVLLSEALSHGQHRDVLVHFFVYGAIVFLFKARDAARRVPALIKQARSNTELLLGPWWLRTARLLVGYDSWSRTERLAIIVVSLLVTTLFGWAKGGPFSAALFVAVALVNAVLALIALGARLSSARG*
Ga0099830_110192782	3300009088	Vadose Zone Soil	VTRSPLAVLALALLDGAIGAVLLAEALSHGGHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSNTELLLGPWWLQAARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAMVNGALALIALLTALALLAPWVAPQNPFDLSQLSIMDNK
Ga0099827_110920842	3300009090	Vadose Zone Soil	VTRSPLSVFSLALLDGGIGAGALALALSHGGHRDVLVHFIVYLLVIGLFKAREAARRLPALITQARSAGGTLSLGPWWLRTTRLLIGYDSWSRTERLGIVSISAIVVLLFGWDDSGPFAAA*
Ga0105240_113219772	3300009093	Corn Rhizosphere	VLALALLDGTIGALLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAEGGPFAAALFLAVAIVNGMLALIALGAQLSSSRPRR*
Ga0075423_101425553	3300009162	Populus Rhizosphere	VTRSPWAVLALALLDGAIGAAFLAEALRHGESRDVLAHFFVYFAIVFAFKARDAARRLPALVAQARGGTLLIAGPWWIRTARALVGYDSWSRTERFGIVVIAGIVTVLFGWSKGGPFAAALFLAVATVNAGLALVALAARFAGRRS*
Ga0105242_102379362	3300009176	Miscanthus Rhizosphere	MTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0105859_11546532	3300009651	Permafrost Soil	AALGAGALALALSHGERRAVFAHFAVYAVVIGLFKARDAARRLPALIAQARSAGGTLTFGSWWLRTTRLLIGYDSWSRTERLGLVSISTVIVLLFGWDDGGPFAAALFLAVAAVNATLALVAWGARLTAR*
Ga0105854_10011306	3300009660	Permafrost Soil	VTRSPLSVFLLALLDGTLGAGALALALAHASHRDVLAHFVVYVAVIGFFKARDAARRLPALIAQARSAGGTLTFGPWWLRTTRLLIGYDSWSRTERFGLVAISTVVLLLFGWDDGGPFAAALFLAVAAVNATLALVAWGARLTAR*
Ga0105858_10160593	3300009661	Permafrost Soil	VTRSPLSVFLLALLDGTLGAGALALALSHASHRDVLAHFVVYVAVIGFFKARDAARRLPALIAQARSAGGTLTFGPWWLRTTRLLIGYDSWSRTERFGLVAISTVVLLLFGWDDGGPFAAALFLAVAAVNATLALVAWGARLTAR*
Ga0120164_10034885	3300011987	Permafrost	VTRSPWAVLALALLDGAIGAAVLAEALSHGRHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARTDTKLLLGPWWLQTARLLIGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSTSRG*
Ga0120157_10980892	3300011994	Permafrost	TLVVTRSPLSVLLLALLDGALGAGALALALSHGGHRDVLVHFVVYLLVIGLFKARDAARRLPALVAQARSAGGTLSLGPLWLRTTRLLIGYDSWSRTERLGMVSISTIVILLFGWDDGGPFAAALFVAVAAVDAALALVALGARLTAR*
Ga0120163_10009014	3300012003	Permafrost	VTRSPWAVLALALLDGAIGAAVLAEALSHGRHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARTNTKLLLGPWWLQTARLLIGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSTSRG*
Ga0120163_10905982	3300012003	Permafrost	LALLDGAIGAVLLSEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSNTELLLGPWWLRTARLLVGYDSWSRTERLAIIVVSLLVTTLFGWAKGGPFAAALFVAVALVNAVLALIALGARLSSARG*
Ga0137389_107696542	3300012096	Vadose Zone Soil	VTRSPLAVLALALLDGAIGAVLLAEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARSNTELLLGPWWLQAARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAIVNGALALIALGARLSAGRG*
Ga0137399_116872031	3300012203	Vadose Zone Soil	ALLDGAIGAVVLAAALAHGPHRDVLVHFFVYGAIILLFKVRDAAKRVPALIKQARANNQVQLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWARGGPFAAALFFAVAIVDAALALIALAARLSVRRV*
Ga0137378_117293401	3300012210	Vadose Zone Soil	VFLLALVDGAIGGALLWAGVDHGNHRSVLVQFFVYAAIVFFFKARDAARRLPALVTQVRLSNTVLLAPRWLRTTRALVGYDPWSRTERLAIIVIAVVVTTLFGWAKGGPFAAALFVSVATVDGLLALVAW
Ga0137377_103664312	3300012211	Vadose Zone Soil	MTRSPLQVFLLALLDGAVGAAILAAALSHGRHRDELVHFFAYLAIVLFFKAREAVGRLGTLVAAARSAPKTVSLGPWWLRISRLLIGYDSWSRTERLGIVVVSVIVCTLFGWDDGGPFAAALFLAIAAVNGTLALVAWAARLSA*
Ga0150985_1118264681	3300012212	Avena Fatua Rhizosphere	PDPAVTRSPWAVLALAALDGAIGAAFLLAALEHGEHRDVLVHFAVYTVIVFAFKARDAARRVPALIGQARTGTTVAVGPWWLRTSRLLIGYDSWSRTERLGIVAVSLIVTTLFGWAKGGPFAAALFVAVAVVDAALALVALGARLAAR*
Ga0150985_1144522802	3300012212	Avena Fatua Rhizosphere	AALLAEALAHGERRDVLVHFFVYFGIVFVFKARDAARRIPALVRQARASTELLLGPWWLQTGRLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFLAVAIVNASLALVALGARLWAR*
Ga0150984_1126082392	3300012469	Avena Fatua Rhizosphere	WRSPRPGSDALALGGARARSARRRVGAAFLLAALEHGEHRDVLVHFAVYTVIVFAFKARDAARRVPALIGQARTGTTLAVGPWWLRTSRLLIGYDSWSRTERLGIVAVSLIVTTLFGWAKGGPFAAALFVAVAVVDAALALVALGARLAAR*
Ga0137397_103423482	3300012685	Vadose Zone Soil	VTRSPWAVLALALLDGAIGAALITEALAHGPHRDVLVRFLVYTAIVFLFKARDAARRLPALVAQARASTGLLAAGPWWLRTTRALIGYDSWSRTERLGIIVISFIVTTLFGWAKGGPFAAALFVAVAVVNAALALVALATRLSARRG*
Ga0137394_111180071	3300012922	Vadose Zone Soil	LALLDGTIGTALITEALAHGAYRDVLVHFLVYTAIVFLFKARDAARRLPALVAQARANTGLLAAGPWWLRTTRALIGYDSWSRTERLGIIVISFIVTTLFGWAKGGPFAAALFVAVAVVNAALALVALATRLSARRG*
Ga0137359_102397174	3300012923	Vadose Zone Soil	VLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTLLLGPRWLQTARLLVGYDSWSRTERLGIIVVSVVVTALFGWAQGGPFAAALFIAVAIVDAALALIALGARLTSG*
Ga0164300_108808381	3300012951	Soil	VTRSPWAVLALALLDGAIGAVVLAEALVHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARTATTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS*
Ga0164300_112068511	3300012951	Soil	MTRSPWAVLALALLDGAVGAAFLAEALRHGARRDVLAHFVVYLAIVFAFKARDAARRLPALVGQARKADGLLLTGPWWLRTTRALIGYDSWSRTERFGIVVISLIVTMLFGWAKGGPFAAALFIAVGAVNAGLALVALAARFAGRRL*
Ga0164298_100410123	3300012955	Soil	VTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISLIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0164298_100601843	3300012955	Soil	VTRSPWAVLALALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARTATTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS*
Ga0164303_102795093	3300012957	Soil	TRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV*
Ga0164303_108607381	3300012957	Soil	VTRSPWAVLALALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTLLLGPWWLQAARLLVGYDSWSRTERLGIIVVSVVVTGLFGWAQGGPFAAALFIAVAIVNAALALIALGAR
Ga0164301_100617413	3300012960	Soil	VTRSPWAVLALALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARTATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSSYSSSASGARRERVRSSSRSVCSIQRLMPA
Ga0164308_122419821	3300012985	Soil	ARAVTRSPWAVLALALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS*
Ga0164307_116057242	3300012987	Soil	RNRHFVTRSPWAVLALALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARTATTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS*
Ga0164306_104204722	3300012988	Soil	VTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISLIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARI*
Ga0157370_107528761	3300013104	Corn Rhizosphere	DDAARRARQLYAVTRSPWAVLALALLDGTIGALLLAEALSHGAHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSSRPRR*
Ga0157369_103865763	3300013105	Corn Rhizosphere	AEAISHGPHRDVLVHFFVYGVIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSWRPRR*
Ga0157374_104015842	3300013296	Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGGALLAAALSHGPHRDTLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAGLFRAVAIVNAVLALIALATRLAARS*
Ga0120172_10562371	3300013765	Permafrost	MTRSPLQAFSLALLDGAIGAAVLAEALSHGRHRDVLVRFFVYLLIVLFFKARDAARRLPALVAAARSSSGTVSLGPSWLRALRLLIGYDSWSRTERLGIVVISALVCTLFGWDDGGPFAAALFLAIASVNAALALVAWGARLSARRG*
Ga0120160_10615182	3300014820	Permafrost	VTRSPLSVLALALLDGAIGAVLLSEALSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIKQARTNTKLLLGPWWLQTARLLIGYDSWSRTERLGIIVVSVIVTTLFGLAKGGPFA
Ga0137411_13560201	3300015052	Vadose Zone Soil	VTRSPWAVLALALLDGAIGALVLAEALAHGPHRDVLVHFFVYGGIILLFKARDAAKRVPALIKQARTNNRVQLGPWWLQTTRLLVGYDSWSRTERLGIIVVSVIVTTLFGWARGGPFAAALFFAVAIVDTALALIALGTRLASRPTLRR*
Ga0167650_10641321	3300015203	Glacier Forefield Soil	VTRAPWAVLALALLDGAIGAALLAAALSHGPHRDTLVHFFVYGAVIFVFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLIGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIA
Ga0066662_100065593	3300018468	Grasslands Soil	MTRSPWAVLTLALIDGAVAALILREAIQHGDRRSVLVQFFIYATVVFIFKARDAARRIPALVAQSRASDSLLLAGPWWVRTIRAVVGYDSWSRTERLGMIVIAIVVTVLFGWARGGPFAAALFASVAVVDGVLAVVALGARASRPRS
Ga0193751_12280012	3300019888	Soil	VTRSPWAVLALALLDGAIGAAVLAEALSHGQHRDVLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTVRLLVGYDSWSRTERLGMLSISTIVVLLFGWDDGGPFAAA
Ga0206356_113923802	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGAVLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSSRPRR
Ga0206356_116777532	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPNRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTPLFGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS
Ga0206354_111887372	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGAVLLAEAISHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARNATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS
Ga0206353_108825431	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LDGAIGAVLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGAQLSSSRPRR
Ga0193699_100359373	3300021363	Soil	VTRQPLAVLALALLDGVIGVVVLREAVSHGQHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARASTQLQLGPWWLQAARLLVGYDSWSRTERVGIILVSVIVTTLFGWAKGGPFAAALFLSIAIVNGVLALIALGAQLSARRG
Ga0193699_100429552	3300021363	Soil	VTRSPWAVLALALLDGAIGALVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAAKRVPALIKQARANNQVQRGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWARGGPFAAALFFAVAIVDAALALIALGTRLASRPTL
Ga0247670_10456101	3300024283	Soil	VTRSPWAVLALALLDGAIGGALLAAALSHGPHRDVLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAIVNAVLALIALATR
Ga0179589_100909702	3300024288	Vadose Zone Soil	VLALALLDGAIGALVLAEALAHGPHRDVLVHFFVYGGIILLFKARDAAKRVPALIKQARTNNQVQLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWARGGPFAAALFFAVAIVDAALALIALGTRLASRPTLRR
Ga0247668_10104691	3300024331	Soil	DRRNDARADDAARRARHLHSVTRSPWAVLALALLDGAIGGALLAAALSHGPHRDVLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAIVNAVLALIALVTRLAARS
Ga0179591_10194322	3300024347	Vadose Zone Soil	VTRQPLAVLALALLDGAIGVVVLREAVSHGEHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARASTQIQLGPWWLQAARLLVGYDSWSRTERVGIILVSVIVTTLFGWAKGGPFAAALFLSIAIVNGVLALIALGAQLSARRG
Ga0207642_104155071	3300025899	Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV
Ga0207705_104368292	3300025909	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTPLFGPWWLLTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS
Ga0207707_100747321	3300025912	Corn Rhizosphere	EAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSSRPRR
Ga0207693_110804972	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSPWAVLALALLDGAVGAAFLAEALRHGARRDVLAHFVVYLAIVFAFKARDAARRLPALVGQARKADGLLLTGPWWLRTTRALIGYDSWSRTERFGIVVISLIVTLLFGWAKGGPFAAALFIAVGAVNAGLALVALAARFSGRF
Ga0207660_102428533	3300025917	Corn Rhizosphere	VTRSPWAVLALALLDGAIGALLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSWRPRR
Ga0207660_104177402	3300025917	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS
Ga0207657_100128725	3300025919	Corn Rhizosphere	VTRSPWAVLGLALLDGAIGAVVLAEALAHGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARNATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFIAVAIVNAALALIALGARLTSS
Ga0207657_106020052	3300025919	Corn Rhizosphere	VTRSPWAVLALALLDGAIGAVLLAEAISHGPHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARAGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLS
Ga0207709_102691392	3300025935	Miscanthus Rhizosphere	VTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVV
Ga0207669_112779781	3300025937	Miscanthus Rhizosphere	TVTRSPWAVLALALLDGAIGAALLVVAVQHGERRDVLVHFAVYALIVFAFKARDAGRRVPALIGQARHGTTLAVGPWWLRTARIVIGYDSWSRTERLGIVVISVIVTTLFGWAKGGPFAAALFVSVAVVDAALALVALGARYGARV
Ga0207667_100582842	3300025949	Corn Rhizosphere	VTRSPWAVLALALLDGTIGALLLAEALSHGAHRDVLVHFFVYGAIIFLFKARDAARRVPALIRQARTGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIIVSVIVTTLFGWAKGGPFAAALFLAVAIVNGMLALIALGARLSSSRPRR
Ga0209848_10167412	3300026221	Permafrost Soil	VTRSPLSVFLLALLDGTLGAGALALALSHASHRDVLAHFVVYVAVIGFFKARDAARRLPALIAQARSAGGTLTFGPWWLRTTRLLIGYDSWSRTERFGLVAISTVVLLLFGWDDGGPFAAALFLAVAAVNATLALVAWGARLTAR
Ga0209240_11729451	3300026304	Grasslands Soil	RADDTARRARHVHTMTRSPWAVLALALLDGAIGGALLAAALSHGAHRDVLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAIVNAVLALIALGTRLAVRG
Ga0209647_10758893	3300026319	Grasslands Soil	MTRSPWAVLALALLDGAIGGALLAAALSHGAHRDVLVHFFVYGAVIFLFKARDAARRVPALIRQARSGTTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVIVTTLFGWAKGGPFAAALFIAVAIVNAVLALIALGTRLAVRG
Ga0307284_100409732	3300028799	Soil	VTRSPWAVLALALLDGAIGAVVLAEALAQGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFFAVATVNAALALIALGARLTSR
Ga0307314_100642613	3300028872	Soil	QARSIRNRHYVTRSPWAVLALALLDGAIGAVVLAEALAQGPHRDVLVHFFVYGAIILLFKARDAARRVPALIRQARSATTLLLGPWWLQTARLLVGYDSWSRTERLGIIVVSVVVTGLFGWARGGPFAAALFFAVATVNAALALIALGARLTSR
Ga0265327_103997181	3300031251	Rhizosphere	EVPPRAAAGRRDSGVVTRTPLEVFLLALFDGAIGGTVLWAALDHGAQRDVLVHFFVYGAIILAFKARDAARRLPMLITQARAGTRVVLSPGWLRVTRLLVGYDSWSRTERVGIAGISVIVCLLFGWARGGPFAAALFLAVATVDGALALVAWGARLTR
Ga0308175_1009296882	3300031938	Soil	VGAGVLVLALSHGPRRDVLAHFGVYAAIIFFFKARDAGRRVPQLIAQARSGGTLLVGPWWLRLPRLLLGYDSWSRTERLGFAAISVIVCSLFGWAKGGPFAAALFLSVAAVNAVLALVALAARLSARRG
Ga0307472_1026826341	3300032205	Hardwood Forest Soil	MTRSPWAVLALALLDGAVGAAFLAEALRHGARRDVLAHFVVYLAIVFAFKARDAARRLPALVGQARKADGLLLTGPWWLRTTRALIGYDSWSRTERFGIVVISIIVTLLFGWAKGGPFAAALFI
Ga0370501_0194499_3_425	3300034195	Untreated Peat Soil	TPLEVFLLALFDGAIGGAILWAALDHGAQRDVLVHFFVYGAIILAFKARDAARRLPTLVAQARASNTVLLSPRWLRLTRLLVGYDSWSRTERVGIAGISVIVCLLFGWARGGPFAASLFLAVATVDGALALVAWGARLTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081274

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences