Metagenome Family F081229

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081229
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	64 residues
Representative Sequence	MTYEQFEKECNRVLTNMVGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG
Number of Associated Samples	83
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.44 %
% of genes near scaffold ends (potentially truncated)	19.30 %
% of genes from short scaffolds (< 2000 bps)	74.56 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.263 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (19.298 % of family members)
Environment Ontology (ENVO)	Unclassified (57.018 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.56% β-sheet: 0.00% Coil/Unstructured: 54.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.128.1.1: Isoprenyl diphosphate synthases	d1v4ea_	1v4e	0.63407
c.37.1.1: Nucleotide and nucleoside kinases	d1deka_	1dek	0.61825
a.74.1.0: automated matches	d3mi9b1	3mi9	0.61439
a.74.1.1: Cyclin	d2i53a1	2i53	0.60757
a.74.1.2: Transcription factor IIB (TFIIB), core domain	d1c9ba1	1c9b	0.59855

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF03237	Terminase_6N	5.26
PF03592	Terminase_2	4.39
PF08364	IF2_assoc	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	4.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.93 %
Unclassified	root	N/A	28.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.26 %
Unclassified	root	N/A	28.07 %
Viruses	superkingdom	All Organisms → Viruses	16.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.26 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.63 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	33.33 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	33.33 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	33.33 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.63 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.75 %

Name	Rank	Taxonomy	Distribution
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	33.33 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.63 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.75 %

Name	Rank	Taxonomy	Distribution
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	33.33 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	2.63 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	1.75 %

Name	Rank	Taxonomy	Distribution
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	32.46 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
unclassified Podoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae	2.63 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.75 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	32.46 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Puniceispirillum phage HMO-2011	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	2.63 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.75 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	32.46 %
Unclassified	root	N/A	28.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.04 %
Puniceispirillum phage HMO-2011	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	2.63 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1.75 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10105762	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
3300000117\|DelMOWin2010_c10176569	Not Available	678	Open in IMG/M
3300001460\|JGI24003J15210_10009143	Not Available	4070	Open in IMG/M
3300001832\|ACM6_1004711	Not Available	620	Open in IMG/M
3300005747\|Ga0076924_1128118	Not Available	1526	Open in IMG/M
3300005837\|Ga0078893_12218869	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1076	Open in IMG/M
3300006026\|Ga0075478_10038666	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1580	Open in IMG/M
3300006735\|Ga0098038_1040855	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300006735\|Ga0098038_1067335	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	1271	Open in IMG/M
3300006737\|Ga0098037_1143422	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	805	Open in IMG/M
3300006749\|Ga0098042_1007987	All Organisms → cellular organisms → Bacteria	3431	Open in IMG/M
3300006802\|Ga0070749_10087110	All Organisms → Viruses → Predicted Viral	1859	Open in IMG/M
3300006802\|Ga0070749_10170571	Not Available	1257	Open in IMG/M
3300006802\|Ga0070749_10247144	All Organisms → Viruses → Predicted Viral	1011	Open in IMG/M
3300006802\|Ga0070749_10257635	Not Available	986	Open in IMG/M
3300006802\|Ga0070749_10666241	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	558	Open in IMG/M
3300006867\|Ga0075476_10215232	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	695	Open in IMG/M
3300006869\|Ga0075477_10019497	Not Available	3152	Open in IMG/M
3300006916\|Ga0070750_10113403	All Organisms → Viruses → Predicted Viral	1248	Open in IMG/M
3300007113\|Ga0101666_1034251	Not Available	916	Open in IMG/M
3300007538\|Ga0099851_1313610	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	552	Open in IMG/M
3300007647\|Ga0102855_1101768	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	770	Open in IMG/M
3300008219\|Ga0114905_1148837	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	782	Open in IMG/M
3300009001\|Ga0102963_1075568	Not Available	1381	Open in IMG/M
3300009481\|Ga0114932_10836884	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	532	Open in IMG/M
3300009529\|Ga0114919_10082643	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2345	Open in IMG/M
3300009529\|Ga0114919_10198962	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300009529\|Ga0114919_10476594	Not Available	862	Open in IMG/M
3300009529\|Ga0114919_10813396	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	633	Open in IMG/M
3300009550\|Ga0115013_10122674	All Organisms → Viruses → Predicted Viral	1498	Open in IMG/M
3300009790\|Ga0115012_11158441	Not Available	647	Open in IMG/M
3300010148\|Ga0098043_1041963	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1418	Open in IMG/M
3300010300\|Ga0129351_1347379	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	557	Open in IMG/M
3300010430\|Ga0118733_101246952	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	1484	Open in IMG/M
3300010936\|Ga0137784_1113595	All Organisms → cellular organisms → Bacteria	2927	Open in IMG/M
3300012920\|Ga0160423_10023684	All Organisms → cellular organisms → Bacteria → Proteobacteria	4589	Open in IMG/M
3300012920\|Ga0160423_10045310	All Organisms → cellular organisms → Bacteria	3213	Open in IMG/M
3300012920\|Ga0160423_10087566	Not Available	2212	Open in IMG/M
3300012920\|Ga0160423_10126992	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300012920\|Ga0160423_10148701	Not Available	1644	Open in IMG/M
3300012920\|Ga0160423_10419653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	914	Open in IMG/M
3300017734\|Ga0187222_1001987	All Organisms → cellular organisms → Bacteria	5838	Open in IMG/M
3300017751\|Ga0187219_1068739	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1129	Open in IMG/M
3300017764\|Ga0181385_1131754	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	762	Open in IMG/M
3300017767\|Ga0181406_1230120	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	546	Open in IMG/M
3300017772\|Ga0181430_1072912	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1043	Open in IMG/M
3300017776\|Ga0181394_1044651	All Organisms → Viruses → Predicted Viral	1508	Open in IMG/M
3300017818\|Ga0181565_10081990	Not Available	2299	Open in IMG/M
3300017949\|Ga0181584_10898358	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	519	Open in IMG/M
3300017951\|Ga0181577_10067053	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2528	Open in IMG/M
3300017951\|Ga0181577_10095130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	2067	Open in IMG/M
3300017951\|Ga0181577_10098174	All Organisms → Viruses → Predicted Viral	2031	Open in IMG/M
3300017951\|Ga0181577_10128730	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300017951\|Ga0181577_10361973	Not Available	929	Open in IMG/M
3300017951\|Ga0181577_10752335	Not Available	590	Open in IMG/M
3300017951\|Ga0181577_10915969	Not Available	522	Open in IMG/M
3300017958\|Ga0181582_10155138	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1595	Open in IMG/M
3300017969\|Ga0181585_10921564	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	560	Open in IMG/M
3300018420\|Ga0181563_10084574	Not Available	2114	Open in IMG/M
3300018421\|Ga0181592_10312279	All Organisms → Viruses → Predicted Viral	1134	Open in IMG/M
3300018421\|Ga0181592_10996375	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	540	Open in IMG/M
3300018423\|Ga0181593_10256331	All Organisms → Viruses → Predicted Viral	1353	Open in IMG/M
3300018424\|Ga0181591_10306721	Not Available	1208	Open in IMG/M
3300018424\|Ga0181591_11162709	Not Available	516	Open in IMG/M
3300018426\|Ga0181566_10187604	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300018426\|Ga0181566_10506945	Not Available	847	Open in IMG/M
3300018428\|Ga0181568_10513897	Not Available	953	Open in IMG/M
3300019751\|Ga0194029_1002148	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2549	Open in IMG/M
3300019938\|Ga0194032_1006835	Not Available	1225	Open in IMG/M
3300020054\|Ga0181594_10367774	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	626	Open in IMG/M
3300020269\|Ga0211484_1002502	All Organisms → cellular organisms → Bacteria	4767	Open in IMG/M
3300020274\|Ga0211658_1004367	All Organisms → cellular organisms → Bacteria	3664	Open in IMG/M
3300020289\|Ga0211621_1001546	All Organisms → cellular organisms → Bacteria	5663	Open in IMG/M
3300020306\|Ga0211616_1007897	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1650	Open in IMG/M
3300020316\|Ga0211487_1103947	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	554	Open in IMG/M
3300020397\|Ga0211583_10114978	All Organisms → Viruses → Predicted Viral	1004	Open in IMG/M
3300020403\|Ga0211532_10039548	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300020404\|Ga0211659_10076523	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1559	Open in IMG/M
3300020408\|Ga0211651_10057722	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300020433\|Ga0211565_10300478	Not Available	700	Open in IMG/M
3300020433\|Ga0211565_10300479	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	700	Open in IMG/M
3300020436\|Ga0211708_10094159	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300020439\|Ga0211558_10064120	All Organisms → Viruses → Predicted Viral	1818	Open in IMG/M
3300020584\|Ga0211540_1006589	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300021957\|Ga0222717_10087368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1962	Open in IMG/M
3300021958\|Ga0222718_10074409	Not Available	2066	Open in IMG/M
3300021960\|Ga0222715_10506831	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	639	Open in IMG/M
3300022074\|Ga0224906_1005844	Not Available	5138	Open in IMG/M
3300022074\|Ga0224906_1006109	All Organisms → cellular organisms → Bacteria	5008	Open in IMG/M
3300022934\|Ga0255781_10095471	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300024433\|Ga0209986_10135312	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1293	Open in IMG/M
3300025120\|Ga0209535_1008455	Not Available	5998	Open in IMG/M
3300025127\|Ga0209348_1021788	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300025132\|Ga0209232_1187449	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	638	Open in IMG/M
3300025655\|Ga0208795_1181088	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	506	Open in IMG/M
3300025674\|Ga0208162_1063605	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300025674\|Ga0208162_1072215	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300025759\|Ga0208899_1056711	All Organisms → Viruses → Predicted Viral	1644	Open in IMG/M
3300025759\|Ga0208899_1133249	Not Available	875	Open in IMG/M
3300025889\|Ga0208644_1120030	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300027859\|Ga0209503_10097972	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1368	Open in IMG/M
3300027917\|Ga0209536_102643955	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	589	Open in IMG/M
3300029318\|Ga0185543_1005295	All Organisms → cellular organisms → Bacteria	3395	Open in IMG/M
3300029318\|Ga0185543_1042859	Not Available	985	Open in IMG/M
3300029318\|Ga0185543_1087124	Not Available	617	Open in IMG/M
3300029448\|Ga0183755_1017070	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300031565\|Ga0307379_10596639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1013	Open in IMG/M
3300031774\|Ga0315331_10509712	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	870	Open in IMG/M
3300031785\|Ga0310343_10002982	Not Available	8915	Open in IMG/M
3300031785\|Ga0310343_10017244	All Organisms → cellular organisms → Bacteria	4038	Open in IMG/M
3300031785\|Ga0310343_10254881	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300032047\|Ga0315330_10339968	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	938	Open in IMG/M
3300032277\|Ga0316202_10243641	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	836	Open in IMG/M
3300034374\|Ga0348335_004108	Not Available	9420	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.12%
Terrestrial	Environmental → Terrestrial	0.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.49%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.88%
Soil	Environmental → Terrestrial → Soil	0.88%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	26.32%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.30%
Coastal	Environmental → Aquatic → Marine → Coastal	18.42%
Strait	Environmental → Aquatic → Marine → Strait	7.02%
River	Environmental → Aquatic → Freshwater → River	1.75%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.75%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.75%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.88%
Clay	Environmental → Terrestrial → Soil → Clay	0.88%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	19.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.30%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.67%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.91%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.02%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	6.14%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	5.26%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.75%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	1.75%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.75%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.88%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	19.30%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.79%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	10.53%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.02%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	5.26%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	4.39%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.63%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.63%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.75%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.75%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.75%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.88%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.88%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.88%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.88%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.88%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.88%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.88%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.88%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.88%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.88%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001832	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM6, ROCA_DNA131_0.2um_27b	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007113	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, Water-is	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300010936	Marine microbial communities from surface seawater of North Pacific Subtropical Gyre ? Stn. ALOHA, 15m	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019938	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW8Nov16_MG	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020274	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)	Environmental	Open in IMG/M
3300020289	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556122-ERR599019)	Environmental	Open in IMG/M
3300020306	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX556014-ERR599098)	Environmental	Open in IMG/M
3300020316	Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX555946-ERR599134)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020584	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555983-ERR599011)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_101057621	3300000117	Marine	MTYQEFEKECNRIVTNMVGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG*
DelMOWin2010_101765692	3300000117	Marine	MTYVSCDTKTYETFEKACDRKLQSIVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG*
JGI24003J15210_100091432	3300001460	Marine	MNEMTYQEFEKECNKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGELSFALHG*
ACM6_10047112	3300001832	Marine Plankton	MTYEEFEKECSRELHKAGFPFTIHDLADASWRDYFDAGMSPRDAIECANDDYWDGELSDILH
Ga0076924_11281184	3300005747	Marine	MTHLKLMNGISFREFEKECNRIVTNMVGLGIHDLADATWRDYYDCGMSPREAVECANDDAWDGELGFALHG*
Ga0078893_122188694	3300005837	Marine Surface Water	MTYEQFEKECNRLLTVKVGLGIHDFADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0075478_100386662	3300006026	Aqueous	MTYVSCDTKTYESFEKACDRKLQSIVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG*
Ga0098038_10408554	3300006735	Marine	MTIERDDKLDYEQFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRDAIECANDDFWDGELNDILHG*
Ga0098038_10673353	3300006735	Marine	MTYEQFEKECNRLLTVKVGLGIHDLADACWRDYYDDGMCVIDALQTANDDHWDNDLDQFLYG*
Ga0098037_11434221	3300006737	Marine	MTIERDDKLDYEQFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRDAIECANDDFWDG
Ga0098042_10079876	3300006749	Marine	MTYEEFEIECNRVLTNIAGLGIHDLADATWRDYYEDGMSPRAAIECANDDFWDGELNDILHC*
Ga0070749_100871104	3300006802	Aqueous	MTYEQSMTYEQFEKECNRVLTNMVGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG*
Ga0070749_101705712	3300006802	Aqueous	MTYVSYDTKTYEAFEKACDRKLQSMVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG*
Ga0070749_102471442	3300006802	Aqueous	MTYQEFEKECNRIVTNMVGLGIHDLADATWRDYYDCGMSPRDAVECANDDAWDGELSEILHG*
Ga0070749_102576352	3300006802	Aqueous	MTYEQFEKECNRVLTNMVGLGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGDLSEILHG*
Ga0070749_106662412	3300006802	Aqueous	MTYEQFEKECNRVLTNMVGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG*
Ga0075476_102152322	3300006867	Aqueous	MTYQEFEKECNRIVTNMVGLGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG*
Ga0075477_100194976	3300006869	Aqueous	YVSCDTKTYESFEKACDRKLQSIVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG*
Ga0070750_101134032	3300006916	Aqueous	MTYEEFEAACTKELYKVGVPFSIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG*
Ga0101666_10342511	3300007113	Volcanic Co2 Seep Seawater	MTCAYKEFEKECSRELHKAGFPFTIHDLADASWRDYFEAGMSPRDAIECANDDYWDGELSTILHG*
Ga0099851_13136102	3300007538	Aqueous	MTHLELRNGLSFREFEIECNRVLTNIAGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG*
Ga0102855_11017681	3300007647	Estuarine	MTYQEFEKECNKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGELSFALHG*
Ga0114905_11488372	3300008219	Deep Ocean	MTYEQFEKECNRLLTNKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSELL
Ga0102963_10755682	3300009001	Pond Water	MIMTYVSCDTKTYEAFEKACDRKLQSIIGFGINDLADATWRDYYDAGMSPIDAIHCANDDAWDGEISEFLHG*
Ga0114932_108368842	3300009481	Deep Subsurface	MTHVQLINGLDYEQFERECNRVLTNMAGLGIHDLEDATWRDYYESGMSPRAAIECANDDAWDGELNDILHG*
Ga0114919_100826433	3300009529	Deep Subsurface	MTYEQFEKECNRVLTNMVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDGELSFVLHG*
Ga0114919_101989621	3300009529	Deep Subsurface	ECNRLLTNKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL*
Ga0114919_104765941	3300009529	Deep Subsurface	MIMTYVSCDTKTYEAFEKACDRKLQSMVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGDLSEILHG*
Ga0114919_108133962	3300009529	Deep Subsurface	MTYEQFEKECNRLLTNKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSGVL
Ga0115013_101226744	3300009550	Marine	MNNMTTEREDGLTYEQFETACNRQLTNIAGLGIHDMEDATWRSYYDSGMTPRDAIECANDDWWDGALNDVLHG*
Ga0115012_111584412	3300009790	Marine	MTYEEFEKECSRELHKAGFPFTIHDLADASWRDYFDAGMSPRDAIECANDDYWDGELSDILHG*
Ga0098043_10419631	3300010148	Marine	MNNMTTEREDGLTYDQFETACNRQLTNIAGLGIHDMEDATWRSYYDSGMTPRVAIECANDDWWDGALNDVLHG*
Ga0129351_13473792	3300010300	Freshwater To Marine Saline Gradient	NRLLTIKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL*
Ga0118733_1012469522	3300010430	Marine Sediment	MTYEQFEKECNRLLTVKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWGYELSEVL
Ga0137784_11135954	3300010936	Marine	MKYEEIENPTYEQFEKECDRQVTNMAGLGIHDLADASWRDYFDTGMTPRAAIECANDDFWDGELNDILHG*
Ga0160423_100236846	3300012920	Surface Seawater	MNNMTTEREDGLTYDQFETACNRQLTNIAGLGIHDMEDATWRSYYDSGMTPRDAIECANDDWWDGALNDVLHG*
Ga0160423_100453104	3300012920	Surface Seawater	MTYEDFMKECNRLLTVKIGLGVDDMPDAAWRDYHEDGLKPSHALECANDDYWDGQLTDVL
Ga0160423_100875667	3300012920	Surface Seawater	MTYEEFEKECSRELYKTGFPFTIHDLADASWRDYFDAGMSPRDAIECANDDYWNGELSDILHG*
Ga0160423_101269921	3300012920	Surface Seawater	MTHLKLINGISFQEFERECNRVLTNMAGLGIHDLEDATWRDYYESGMSPRAAIECANDDFWDGELNDILHG*
Ga0160423_101487012	3300012920	Surface Seawater	MGVIMTIEREDGLDYEQFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRDAIECANDDAWDGELNDILHG*
Ga0160423_104196532	3300012920	Surface Seawater	MKYEEIENPTYEQFEKECNRQVTNIAGLGIHDLADASWRDYFDAGMSPRNAIECANDDFWDGELSDILHG*
Ga0187222_100198714	3300017734	Seawater	VTYEQFERECSRTLSRLCGLGIHDLADAEWRSYYDAGMTPIDALHCANDDYWDGELSAILHG
Ga0187219_10687392	3300017751	Seawater	MTYQEFEKECNKIVTNMVGLGIHDLADATWRSYYDSGLTPRDAIECANDDWWDGELSFALHG
Ga0181385_11317543	3300017764	Seawater	FEKECNKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGELSFALHG
Ga0181406_12301202	3300017767	Seawater	MTYQEFEKECDKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGELSFALHG
Ga0181430_10729121	3300017772	Seawater	MTYQEFEKECNKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGEISFAL
Ga0181394_10446511	3300017776	Seawater	MSYEQFEKECNRLLTVKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0181565_100819902	3300017818	Salt Marsh	MTYEQFEKECNRVLTNMIGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181584_108983581	3300017949	Salt Marsh	MTFEQSMTYEQFEKECNRVLTNMVGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181577_100670534	3300017951	Salt Marsh	MNKLSTYKEFEKACDKKLQSMVGLGIHDLADATWRDYYDCGMTPIDAIHCANDDAWDGELSEILHG
Ga0181577_100951303	3300017951	Salt Marsh	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYYEDGLHPLEALNCANEDAWGYELSEVL
Ga0181577_100981742	3300017951	Salt Marsh	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYFDDGLHPLEALNCANEDAWGYELSEML
Ga0181577_101287301	3300017951	Salt Marsh	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYYDDGLHPLEALNCANEDAWDYELSEVL
Ga0181577_103619732	3300017951	Salt Marsh	MTFEQSMTYEQFEAACTKELHKVGFPFSIHDLADATWRDYYDCGMTPRDAVECANDDAWDGELSDILHG
Ga0181577_107523351	3300017951	Salt Marsh	QFEAACTKELYKVGVPYSIHDLADATWRDCYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181577_109159691	3300017951	Salt Marsh	MTHVKLINGISFREFEAACTKELHKVGVPFSIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181582_101551382	3300017958	Salt Marsh	MTFEQSMTYEQFEKECNRVLTNIAGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181585_109215642	3300017969	Salt Marsh	MTYEQFEKECNRLLTVKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0181563_100845742	3300018420	Salt Marsh	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYYDDGLHPLEALNCANEDAWGYELSEML
Ga0181592_103122792	3300018421	Salt Marsh	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0181592_109963751	3300018421	Salt Marsh	MTFEQFEKECNRVLTNIAGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181593_102563311	3300018423	Salt Marsh	CGAVSFIGDDKMTHVKLINGISFREFEAACTKELHKVGVPFSIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0181591_103067211	3300018424	Salt Marsh	MTHEQSMTYEQFEAACTRELQKAGVPFSIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG
Ga0181591_111627092	3300018424	Salt Marsh	MTFEQFEKECNRVLTNIAGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWD
Ga0181566_101876042	3300018426	Salt Marsh	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYFDDGLHPLEALNCANEDAWDYELSEVL
Ga0181566_105069451	3300018426	Salt Marsh	MMTFEQFEKECDRELQKAGVPCSIKDLADAKWRDYYDSDMSPRDAIECANDETWDGELNNFLYG
Ga0181568_105138972	3300018428	Salt Marsh	MTYEQFEAACTKELHKVGVPFSIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSEILHG
Ga0194029_10021482	3300019751	Freshwater	MTYEQFEKECNRLLTIKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0194032_10068353	3300019938	Freshwater	MTYVSCDTKTYESFEKACDRKLQSIVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG
Ga0181594_103677741	3300020054	Salt Marsh	MTFEQFEKECNRVLTNIAGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDG
Ga0211484_10025025	3300020269	Marine	MKYEEIENPTYEQFEKECNRQVTNMAGLGIHDLADASWRDYFDTGMTPRAAIECANDDFWDGELSDILHG
Ga0211658_10043674	3300020274	Marine	MKYEEIENPTYEQFEKECNRQVTNIAGLGIHDLADASWRDYFDAGMSPRNAIECANDDFWDGELSDILHG
Ga0211621_10015467	3300020289	Marine	MKYEEIENPTYEEFEKECNRQVTNMAGLGIHDLADATWRDYFDAGMTPRAAIECANDDFWDGELSDVLHGCDDVVMLQFGS
Ga0211616_10078971	3300020306	Marine	MTYEEFEKECSRELHKTGFPFTIHDLADASWRDYFDAGMTPRDAIECANDDYWDGELSDILHG
Ga0211487_11039471	3300020316	Marine	MKYEEIENPTYEQFEKECNRQVTNMAGLGIHDLADASWRDYFDTGMTPRAAIECANDDF
Ga0211583_101149782	3300020397	Marine	EEFEKECNRQVTNMAGLGIHDLADATWRDYFDAGMTPRAAIECANDDFWDGELSDVLHGCDDVVMLQFGS
Ga0211532_100395483	3300020403	Marine	MTYEEFEKECSRELHKAGFPFTIHDLADASWRDYFDAGMSPRDAIECANDDYWDGELSDILHG
Ga0211659_100765233	3300020404	Marine	MTTEREDGLTYDQFETACNRQLTNIAGLGIHDMEDATWRSYYDSGMTPRDAIECANDDWWDGALNDVLHG
Ga0211651_100577225	3300020408	Marine	MTYEEFEKECSRELHKTGFPFTIHDLADASWRDYFEAGMSPRDAIECANDDYWDGELSDILHG
Ga0211565_103004782	3300020433	Marine	MTYEEFEKECSRELHKTGFPFTIHDLADASWRDYFEAGMSPRDAIECANDDYWDGELSDILH
Ga0211565_103004792	3300020433	Marine	MTYEEFEKECNRQLTNIAGLGIHDLADASWRDYFEAGMSPRDAIECANDDYWDGELSDILHG
Ga0211708_100941593	3300020436	Marine	MTHVQLINGISFREFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRDAIECANDDAWDGELNDILHG
Ga0211558_100641204	3300020439	Marine	MTYEQFEKECNRLLTVKVGLGIHDLPDACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0211540_10065892	3300020584	Marine	LRWPGFVYERKKQMTYEEFEKECSRELHKAGFPFTIHDLADASWRDYFDAGMSPRDAIECANDDYWDGELSDILHG
Ga0222717_100873683	3300021957	Estuarine Water	MTYVSCDTKTYEAFEKACDRKLQSIIGFGINDLADATWRDYYDAGMSPIDAIHCANDDAWDGEISEFLHG
Ga0222718_100744094	3300021958	Estuarine Water	MTYEQFEAACSQELHKVGFPLTIHDLADATWRDYYDCGMSPRDAVECANDDAWDGELSDILHG
Ga0222715_105068311	3300021960	Estuarine Water	MTYQEFEKECNKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECAND
Ga0224906_10058449	3300022074	Seawater	MSYEQFEKECNRLLTVKVGLGIHDLPDACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0224906_100610914	3300022074	Seawater	MSYEQFEKECNRLLTIKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0255781_100954714	3300022934	Salt Marsh	CNRLLTVKVGLGIHDLPDACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0209986_101353122	3300024433	Deep Subsurface	MTYEQFEKECNRLLTNKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0209535_10084557	3300025120	Marine	MTYQEFEKECNKIVTNMVGLGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGELSFALHG
Ga0209348_10217883	3300025127	Marine	MTIERDDKLDYERFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRDAIECANDDFWDGELSDILHG
Ga0209232_11874492	3300025132	Marine	MTIERDDKLNYEQFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRDAIECANDDAWDGELNDILHG
Ga0208795_11810882	3300025655	Aqueous	MTYEQFEKECNRLLTIKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWGYELSELL
Ga0208162_10636053	3300025674	Aqueous	TYEQFEKECNRLLTIKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWGYELSELL
Ga0208162_10722153	3300025674	Aqueous	TYEQFEKECNRLLTIKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWDYELSEVL
Ga0208899_10567111	3300025759	Aqueous	MTYQEFEKECNRIVTNMVGLGIHDLADATWRDYYDCGMSPRDAVECANDDAWDGELSEILHG
Ga0208899_11332492	3300025759	Aqueous	MTYEEFEAACTKELYKVGVPFSIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG
Ga0208644_11200303	3300025889	Aqueous	MTYEQSMTYEQFEKECNRVLTNMVGLGIHDLADATWRDYYDCGMTPRDAIECANDDAWDGELSDILHG
Ga0209503_100979721	3300027859	Marine	MTTEREDGLTYEQFETACNRQLTNIAGLGIHDMEDATWRSYYDSGMTPRDAIECANDDWWDGALNDVLHG
Ga0209536_1026439552	3300027917	Marine Sediment	MTYEQFEKECNRLLTNKVGLGIHDLPDACWRDYYEDGLHPLEALNCANEDAWGYELSELL
Ga0185543_10052955	3300029318	Marine	MTIERDDKLDYEQFERECNRVLTNMAGLGIHDLADATWRDYYESGMSPRAAIECANDDAWDGELSEVIHG
Ga0185543_10428592	3300029318	Marine	MTYEEFEKECNRQLTNMAGLGIHDLADASWRDYFDAGMSPRDAIECANDDYWDGELSVILHG
Ga0185543_10871241	3300029318	Marine	MTHLELRNGLSYREFETECNRQLTNIAGLGIHDMEDASWRSYYDSGMTPRDAIECANDDWWDGALND
Ga0183755_10170703	3300029448	Marine	MTYEQFEKECNRLLTNKVGLGIHDLADACWRDYYEDGLHPLEALNCANENAWGYELSELL
Ga0307379_105966393	3300031565	Soil	MTYVSCDTKTYEAFEKACDRKLQSMVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGDLSEILHG
Ga0315331_105097121	3300031774	Seawater	MTYQEFEKECDKIVTNMVGVGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGELSFALHG
Ga0310343_100029824	3300031785	Seawater	MTCAYKEFEKECSRELHKAGFPFTIHDLADASWRDYFEAGMSPRDAIECANDDYWDGELSTILHG
Ga0310343_100172444	3300031785	Seawater	MKYEEIENPTYEQFEKECDRQVTNMAGLGIHDLADASWRDYFDTGMTPRAAIECANDDFWDGELNDILHG
Ga0310343_102548813	3300031785	Seawater	MTYEEFEKECSRELYKTGFPFTIHDLADASWRDYYDAGMTPRDAIECANDDYWDGELSDILHG
Ga0315330_103399682	3300032047	Seawater	MTYQEFEKECDKIVTNMVGVGIHDLADATWRSYYDSGMTPRDAIECANDDWWDGEISFALHG
Ga0316202_102436411	3300032277	Microbial Mat	MTYEQFEKECNRLLTNKVGLGIHDLADACWRDYYEDGLHPLEALNCANEDAWGYELSEVL
Ga0348335_004108_6177_6395	3300034374	Aqueous	MIMTYVSCDTKTYESFEKACDRKLQSIVGFGIHDLADATWRDYYDAGMSPIDAIHCANDDAWDGELSEILHG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081229

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences