Metagenome Family F081224

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081224
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	44 residues
Representative Sequence	DAAEEWAACLKQVMEEAEAKWLGDIPALAEVSIGKTWMETH
Number of Associated Samples	99
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.509 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (25.439 % of family members)
Environment Ontology (ENVO)	Unclassified (72.807 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13392	HNH_3	14.91
PF04542	Sigma70_r2	5.26
PF04545	Sigma70_r4	3.51
PF00476	DNA_pol_A	2.63
PF13529	Peptidase_C39_2	0.88
PF01402	RHH_1	0.88
PF00959	Phage_lysozyme	0.88
PF14279	HNH_5	0.88
PF06559	DCD	0.88
PF01844	HNH	0.88
PF12385	Peptidase_C70	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	5.26
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	5.26
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	5.26
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	5.26
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	2.63
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
All Organisms	root	All Organisms	46.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Viruses	superkingdom	All Organisms → Viruses	32.46 %
cellular organisms	root	All Organisms → cellular organisms	14.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	28.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	28.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	28.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.51 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	28.95 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.51 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.51 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.51 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.88 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.51 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	0.88 %
uncultured Mediterranean phage MEDS1 group	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group	0.88 %
uncultured phage MedDCM-OCT-S04-C491	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C491	0.88 %
uncultured phage MedDCM-OCT-S01-C29	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S01-C29	0.88 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.51 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Slopekvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Slopekvirinae	0.88 %
uncultured Mediterranean phage MEDS1 group	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group	0.88 %
uncultured phage MedDCM-OCT-S04-C491	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C491	0.88 %
uncultured phage MedDCM-OCT-S01-C29	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S01-C29	0.88 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.51 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Drulisvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Slopekvirinae → Drulisvirus	0.88 %
uncultured Mediterranean phage MEDS1 group	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group	0.88 %
uncultured phage MedDCM-OCT-S04-C491	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C491	0.88 %
uncultured phage MedDCM-OCT-S01-C29	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S01-C29	0.88 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10024371	Not Available	3076	Open in IMG/M
3300000949\|BBAY94_10205343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S01-C29	530	Open in IMG/M
3300001748\|JGI11772J19994_1003234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	3262	Open in IMG/M
3300002488\|JGI25128J35275_1095246	Not Available	603	Open in IMG/M
3300004460\|Ga0066222_1000953	Not Available	5211	Open in IMG/M
3300004951\|Ga0068513_1024547	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	652	Open in IMG/M
3300005512\|Ga0074648_1176339	Not Available	617	Open in IMG/M
3300005942\|Ga0070742_10085546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	866	Open in IMG/M
3300006025\|Ga0075474_10081761	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1058	Open in IMG/M
3300006735\|Ga0098038_1283993	Not Available	517	Open in IMG/M
3300006737\|Ga0098037_1062470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C491	1327	Open in IMG/M
3300006749\|Ga0098042_1052878	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300006793\|Ga0098055_1272736	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	634	Open in IMG/M
3300006810\|Ga0070754_10361768	Not Available	640	Open in IMG/M
3300006810\|Ga0070754_10410084	Not Available	592	Open in IMG/M
3300006810\|Ga0070754_10428631	Not Available	576	Open in IMG/M
3300006870\|Ga0075479_10125589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1055	Open in IMG/M
3300006874\|Ga0075475_10178708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300006916\|Ga0070750_10199364	Not Available	887	Open in IMG/M
3300006920\|Ga0070748_1137568	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	913	Open in IMG/M
3300006924\|Ga0098051_1027575	All Organisms → Viruses	1619	Open in IMG/M
3300007344\|Ga0070745_1210470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	715	Open in IMG/M
3300007344\|Ga0070745_1247538	Not Available	645	Open in IMG/M
3300007539\|Ga0099849_1071386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1417	Open in IMG/M
3300007640\|Ga0070751_1258954	Not Available	658	Open in IMG/M
3300008012\|Ga0075480_10325259	Not Available	774	Open in IMG/M
3300009001\|Ga0102963_1226561	Not Available	742	Open in IMG/M
3300009508\|Ga0115567_10059303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2845	Open in IMG/M
3300009512\|Ga0115003_10131535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1526	Open in IMG/M
3300009703\|Ga0114933_10923164	Not Available	554	Open in IMG/M
3300010148\|Ga0098043_1019452	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2189	Open in IMG/M
3300010149\|Ga0098049_1054769	Not Available	1270	Open in IMG/M
3300010299\|Ga0129342_1145373	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	867	Open in IMG/M
3300010354\|Ga0129333_10993672	Not Available	705	Open in IMG/M
3300010368\|Ga0129324_10348633	Not Available	576	Open in IMG/M
3300010389\|Ga0136549_10378914	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012919\|Ga0160422_10339708	Not Available	928	Open in IMG/M
3300012919\|Ga0160422_10358706	Not Available	903	Open in IMG/M
3300012919\|Ga0160422_10556681	Not Available	725	Open in IMG/M
3300012953\|Ga0163179_11496967	Not Available	607	Open in IMG/M
3300017708\|Ga0181369_1072911	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	740	Open in IMG/M
3300017708\|Ga0181369_1079005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	702	Open in IMG/M
3300017709\|Ga0181387_1023122	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1211	Open in IMG/M
3300017717\|Ga0181404_1040285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1188	Open in IMG/M
3300017732\|Ga0181415_1076837	Not Available	754	Open in IMG/M
3300017732\|Ga0181415_1110261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	620	Open in IMG/M
3300017738\|Ga0181428_1055111	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	927	Open in IMG/M
3300017739\|Ga0181433_1101810	Not Available	696	Open in IMG/M
3300017744\|Ga0181397_1108677	Not Available	726	Open in IMG/M
3300017748\|Ga0181393_1080024	Not Available	857	Open in IMG/M
3300017750\|Ga0181405_1071708	Not Available	893	Open in IMG/M
3300017752\|Ga0181400_1051280	Not Available	1278	Open in IMG/M
3300017755\|Ga0181411_1019211	Not Available	2226	Open in IMG/M
3300017756\|Ga0181382_1055753	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1130	Open in IMG/M
3300017757\|Ga0181420_1160441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	667	Open in IMG/M
3300017762\|Ga0181422_1208936	Not Available	586	Open in IMG/M
3300017763\|Ga0181410_1166197	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	615	Open in IMG/M
3300017767\|Ga0181406_1027335	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group	1791	Open in IMG/M
3300017768\|Ga0187220_1197834	Not Available	605	Open in IMG/M
3300017769\|Ga0187221_1146192	Not Available	701	Open in IMG/M
3300017781\|Ga0181423_1000333	Not Available	23974	Open in IMG/M
3300017951\|Ga0181577_10176568	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300017986\|Ga0181569_10898519	Not Available	576	Open in IMG/M
3300018049\|Ga0181572_10310662	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1000	Open in IMG/M
3300018420\|Ga0181563_10208038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1189	Open in IMG/M
3300018428\|Ga0181568_10818209	Not Available	719	Open in IMG/M
3300019739\|Ga0194012_1060268	Not Available	544	Open in IMG/M
3300019745\|Ga0194002_1101257	Not Available	507	Open in IMG/M
3300019751\|Ga0194029_1022079	Not Available	976	Open in IMG/M
3300020246\|Ga0211707_1039257	Not Available	644	Open in IMG/M
3300020410\|Ga0211699_10328987	Not Available	599	Open in IMG/M
3300020410\|Ga0211699_10420159	Not Available	530	Open in IMG/M
3300020410\|Ga0211699_10429554	Not Available	524	Open in IMG/M
3300020417\|Ga0211528_10196172	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	777	Open in IMG/M
3300020436\|Ga0211708_10391492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	570	Open in IMG/M
3300020461\|Ga0211535_10391295	Not Available	630	Open in IMG/M
3300020474\|Ga0211547_10322096	Not Available	783	Open in IMG/M
3300021335\|Ga0213867_1004968	Not Available	5743	Open in IMG/M
3300021356\|Ga0213858_10134399	Not Available	1208	Open in IMG/M
3300021373\|Ga0213865_10088961	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300021959\|Ga0222716_10015133	Not Available	5793	Open in IMG/M
3300021959\|Ga0222716_10475511	Not Available	708	Open in IMG/M
3300021960\|Ga0222715_10058666	Not Available	2621	Open in IMG/M
3300022057\|Ga0212025_1026098	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	969	Open in IMG/M
3300022149\|Ga0196907_101110	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1240	Open in IMG/M
3300022158\|Ga0196897_1042201	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300022167\|Ga0212020_1063002	Not Available	627	Open in IMG/M
3300022187\|Ga0196899_1032867	All Organisms → Viruses → Predicted Viral	1807	Open in IMG/M
3300024346\|Ga0244775_10513575	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	978	Open in IMG/M
3300025101\|Ga0208159_1013347	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2140	Open in IMG/M
3300025127\|Ga0209348_1160920	Not Available	653	Open in IMG/M
3300025132\|Ga0209232_1226619	Not Available	554	Open in IMG/M
3300025132\|Ga0209232_1254137	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	505	Open in IMG/M
3300025751\|Ga0208150_1246026	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300025751\|Ga0208150_1272117	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Slopekvirinae → Drulisvirus	507	Open in IMG/M
3300025771\|Ga0208427_1029650	All Organisms → cellular organisms → Bacteria → Proteobacteria	2099	Open in IMG/M
3300025771\|Ga0208427_1220777	Not Available	594	Open in IMG/M
3300025815\|Ga0208785_1056902	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1072	Open in IMG/M
3300025840\|Ga0208917_1075423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1277	Open in IMG/M
3300025853\|Ga0208645_1277436	Not Available	540	Open in IMG/M
3300025881\|Ga0209309_10086164	All Organisms → Viruses → Predicted Viral	1740	Open in IMG/M
3300026187\|Ga0209929_1177107	Not Available	506	Open in IMG/M
3300027571\|Ga0208897_1123812	Not Available	649	Open in IMG/M
3300027675\|Ga0209077_1207099	Not Available	547	Open in IMG/M
3300028197\|Ga0257110_1054138	Not Available	1742	Open in IMG/M
3300029309\|Ga0183683_1028490	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1010	Open in IMG/M
3300031539\|Ga0307380_11170757	Not Available	598	Open in IMG/M
3300031566\|Ga0307378_10295422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1534	Open in IMG/M
3300031673\|Ga0307377_10697793	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	713	Open in IMG/M
3300031952\|Ga0315294_10093880	Not Available	3116	Open in IMG/M
3300034374\|Ga0348335_103032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	891	Open in IMG/M
3300034374\|Ga0348335_121314	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300034374\|Ga0348335_152017	Not Available	631	Open in IMG/M
3300034375\|Ga0348336_156690	Not Available	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.49%
Terrestrial	Environmental → Terrestrial	2.63%
Algae	Host-Associated → Algae	0.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	87.72%
Freshwater	Environmental → Aquatic → Freshwater	4.39%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.51%
Soil	Environmental → Terrestrial → Soil	2.63%
Sediment	Environmental → Aquatic → Sediment	0.88%
Green Algae	Host-Associated → Algae → Green Algae	0.88%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	31.58%
Oceanic	Environmental → Aquatic → Marine → Oceanic	18.42%
Strait	Environmental → Aquatic → Marine → Strait	16.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.16%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.39%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.51%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.63%
Clay	Environmental → Terrestrial → Soil → Clay	2.63%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.75%
Lake	Environmental → Aquatic → Freshwater → Lake	0.88%
River	Environmental → Aquatic → Freshwater → River	0.88%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.88%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	31.58%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	16.67%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.16%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.63%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.63%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.75%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.88%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	25.44%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	16.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	13.16%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.89%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.39%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.63%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.63%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.63%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.63%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.63%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.75%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.75%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.75%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.88%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.88%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.88%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.88%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.88%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.88%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.88%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004951	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005942	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019739	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_8-9_MG	Environmental	Open in IMG/M
3300019745	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_8-9_MG	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022149	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (v3)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_100243711	3300000117	Marine	EEKAQHWADQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH*
BBAY94_102053431	3300000949	Macroalgal Surface	LLLVREDAAEEGAATLKQAMEEAEAKWLGEIPALAEVSFGKTWQETH*
JGI11772J19994_10032349	3300001748	Saline Water And Sediment	WAAKLKRIMEDAEAQWLGDVPPLAEPSVGKRWSEIH*
JGI25128J35275_10952461	3300002488	Marine	EDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGDKWSEVH*
Ga0066222_100095316	3300004460	Marine	EVKIGGWLHDEILLLIREGKAQQWGGQVKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH*
Ga0068513_10245473	3300004951	Marine Water	AEEWAATLKQVMEEAEAKWLGEIPALAEVSFGKTWQETH*
Ga0074648_11763391	3300005512	Saline Water And Sediment	AKLKRIMEDAEAQWLGDVPPLAEPSVGKRWSEIH*
Ga0070742_100855464	3300005942	Estuarine	WALQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH*
Ga0075474_100817614	3300006025	Aqueous	VKEDKAQYWAEQLKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH*
Ga0098038_12839931	3300006735	Marine	ELLLLVKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGNKWSEVH*
Ga0098037_10624701	3300006737	Marine	EDAAQEWAGVLKQVMEAAEARWLGEIPALAEVSIGKTWDEAH*
Ga0098042_10528783	3300006749	Marine	LLVKEDLADEWAQILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH*
Ga0098055_12727361	3300006793	Marine	DEWAAVLKQVMEEAEAKWLGEIPSLAEVSIGKTWREVHLQ
Ga0070754_103617682	3300006810	Aqueous	HDEVVLLVREGYENRWAEILKDVMEKAEAKWLGEIPALAEVHVGKTWSDVH*
Ga0070754_104100842	3300006810	Aqueous	AAILKEIMEAAEAKWLGDIPALAEVNVGKRWSDTH*
Ga0070754_104286311	3300006810	Aqueous	KAQHWAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH*
Ga0075479_101255891	3300006870	Aqueous	VVLLVREGYEKRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH*
Ga0075475_101787081	3300006874	Aqueous	VHDEVVLLVREGYENRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH*
Ga0070750_101993643	3300006916	Aqueous	ANEWAARLKQVMESAEAKWLGTVPPLAEPQVGKRWSEIH*
Ga0070748_11375684	3300006920	Aqueous	LLLVKEDKAQHWAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH*
Ga0098051_10275751	3300006924	Marine	ACLKQVMEEAEAKWLGDIPALAEVSIGKTWMETH*
Ga0070745_12104701	3300007344	Aqueous	DEILLLVREGYEERWAAILKEVMEAAEAKWLGDIPALAEVNVGKRWSDTH*
Ga0070745_12475382	3300007344	Aqueous	EERWAAILKEIMEAAEAKWLGDIPALAEVNVGKRWSETH*
Ga0099849_10713861	3300007539	Aqueous	LVREGYEKRWAEILKDVMERAEAKWLGEIPALAEVHVGKTWSEVH*
Ga0070751_12589542	3300007640	Aqueous	QGYEERWAAILKEVMEAAEAKWLGDIPALAEVNVGKRWSETH*
Ga0075480_103252593	3300008012	Aqueous	GYEERWAAILKEIMEAAEAKWLGDIPALAEVNVGKRWSETH*
Ga0102963_12265611	3300009001	Pond Water	EGYEEKWAKILTDVMEQAEAKWLGDIPPLAEAHYGKTWAAAKG*
Ga0115567_100593036	3300009508	Pelagic Marine	IHDEILLLVREDKAQQWALQLKQVMESAEAKWLGDIPPLAEPSVGKRWSEIH*
Ga0115003_101315355	3300009512	Marine	REDKAQQWADQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH*
Ga0114933_109231642	3300009703	Deep Subsurface	ELILLVKEDLADEWAQILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH*
Ga0098043_10194526	3300010148	Marine	HDELILLVKEDLADEWAQILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH*
Ga0098049_10547691	3300010149	Marine	AAEEWAACLKQVMEEAEAKWLGDIPALAEVSIGKTWMETH*
Ga0129342_11453733	3300010299	Freshwater To Marine Saline Gradient	DEILLLVRDGLAQHWADQLKQVMEAAEAKWLGEVPPLAEVKVGKTWAETH*
Ga0129333_109936721	3300010354	Freshwater To Marine Saline Gradient	VLLLVREGQEQEWAATLKRVMEEAEAKWLGDIPALAEVHTGTRWSETH*
Ga0129324_103486331	3300010368	Freshwater To Marine Saline Gradient	DEILLLVKEDKAQEWAAKLKRIMEDAEAMWLGDIPPLAEPSIGKRWSEIH*
Ga0136549_103789142	3300010389	Marine Methane Seep Sediment	ADHLKRVMEAAEAKWLGDIPALAEVHIGKVWSETH*
Ga0160422_103397084	3300012919	Seawater	LVKEDLADEWAEILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH*
Ga0160422_103587061	3300012919	Seawater	DEWAEILKTTMENAEAKWLGDVPALAEVSIGDRWSEVH*
Ga0160422_105566811	3300012919	Seawater	ILLVKEDIANEWAEILKETMEKAEAKWLGDVPALAEVSVGDKWSEVH*
Ga0163179_114969671	3300012953	Seawater	AAVHDELLLLVKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGNKWSEVH*
Ga0181369_10729111	3300017708	Marine	KAEEWAAKLKRVMEDAEAMWLDDIPPLAEPSIGKRWSEIH
Ga0181369_10790051	3300017708	Marine	AEEWAACLKQVMEEAEAKWLGDIPALAEVSIGKTWMETH
Ga0181387_10231221	3300017709	Seawater	LLLLVKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGDKWSEVH
Ga0181404_10402855	3300017717	Seawater	EEWAAVLKQVMEEAEAIWLEDIPALAEVSIGKTWMETH
Ga0181415_10768371	3300017732	Seawater	EDIADEWAEILKNTMEKAEAKWLGEIPALAEVSIGNKWSEVH
Ga0181415_11102613	3300017732	Seawater	LLLVREDAAEEWAAALKKVMEEAEAKWLGEIPALAEVSVGKTWSDVH
Ga0181428_10551111	3300017738	Seawater	AQEWAATLKQVMEEAEAQWLGEIPALAEVSIGKTWMETH
Ga0181433_11018105	3300017739	Seawater	EWAQILKTTMEKAEAKWLGEIPALAEVSIGNKWSEVH
Ga0181397_11086771	3300017744	Seawater	DIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGDKWSEVH
Ga0181393_10800244	3300017748	Seawater	AAAVHDELLLLVKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGDKWSEVH
Ga0181405_10717081	3300017750	Seawater	VKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGDKWSEVH
Ga0181400_10512805	3300017752	Seawater	AREDAAEEWAACLNHVMEEAEAKWLGDLPALAEVSIGKTWMETH
Ga0181411_10192114	3300017755	Seawater	LVREDAAEEWAACLKQVMEEAEAKWLGDIPPLAEVSIGKTWMETH
Ga0181382_10557531	3300017756	Seawater	EWAACLKQEMEEAEAKWLGDIPALAEVSIGKTWMETH
Ga0181420_11604411	3300017757	Seawater	NTTKWASILKESMEEAEYKWLGNIPSLAEVSIGKTWSEVH
Ga0181422_12089361	3300017762	Seawater	DEILLLVREDVAEEWAKTLKQVMEEAEAKWLGDIPALAEVSIGKTWMETH
Ga0181410_11661972	3300017763	Seawater	DAAEEWAACLKQVMEEAEAKWLGDIPALAEVSIGKTWMETH
Ga0181406_10273351	3300017767	Seawater	AAAVHDELLLLVKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGNKWSEVH
Ga0187220_11978343	3300017768	Seawater	DIADEWAEILKNTMEKAEAKWLGEIPALAEVSIGNKWSEVH
Ga0187221_11461921	3300017769	Seawater	AVHDELLLLVKEDIADEWAQILKTTMEKAEAKWLGEIPALAEVSIGDKWSEVH
Ga0181423_10003331	3300017781	Seawater	AAEEWAKTLKQVMEEAEAHWLGDIPALAEVSTGKTWEETH
Ga0181577_101765686	3300017951	Salt Marsh	AATLKQVMEEAEAKWLGEIPALAEVSFGKTWQETH
Ga0181569_108985193	3300017986	Salt Marsh	CVHDEILLLVKEDKAQHWAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH
Ga0181572_103106624	3300018049	Salt Marsh	WAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH
Ga0181563_102080384	3300018420	Salt Marsh	LLVREDAAQEWAATLKQVMEEAEAQWLGEIPALAEVSIGKTWMETH
Ga0181568_108182091	3300018428	Salt Marsh	LVKEDKAQHWAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH
Ga0194012_10602683	3300019739	Sediment	AACVHDEILLLVKEDKAQHWAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH
Ga0194002_11012571	3300019745	Sediment	CVHDEILLLVREPKANEWAARLKQVMESAEAMWLGDVPPLAEPQVGKRWSEIH
Ga0194029_10220794	3300019751	Freshwater	KAQQWALQLKQVMESAEAKWLGDIPPLAEPSVGKRWSEIH
Ga0211707_10392571	3300020246	Marine	KEDLADEWAEILKTTMENAEAKWLGDVPALAEVSIGDRWSEVH
Ga0211699_103289873	3300020410	Marine	ILLVKEDLADEWAQILKTTMEKAEAKWLGNVPALAEVSIGDKWSEVH
Ga0211699_104201591	3300020410	Marine	HDELILLVKEDLADEWAEILKTTMENAEAKWLGDVPALAEVSIGDRWSEVH
Ga0211699_104295542	3300020410	Marine	HDELILLVKEDLADEWAEILKTTMEKAEAKWLGDVPALAEVSIGDRWSEVH
Ga0211528_101961724	3300020417	Marine	AAQEWAATLKQVMEEAEAQWLGEIPALAEVSIGKTWMETH
Ga0211708_103914924	3300020436	Marine	DEWAKILKTTMENAEAKWLGDVPALAEVSIGDKWSEVH
Ga0211535_103912951	3300020461	Marine	DELILLVKEDLADEWAEILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH
Ga0211547_103220964	3300020474	Marine	VKEDSADEWAEILKTTMEKSEAKWLGDVPALAEVSIGNRWSEVH
Ga0213867_100496816	3300021335	Seawater	LIVKEDRAEEWAAKLKRIMEDAEAMWLGDIPPLAEPSIGKRWSEIH
Ga0213858_101343995	3300021356	Seawater	EDAAQEWAATLEQVMEDAEAKWLGEIPALAEVSVGKTWSEVH
Ga0213865_100889611	3300021373	Seawater	QEWAATLKQVMEDAEAKWLGKIPALAEVSVGKTWSEVH
Ga0222716_1001513317	3300021959	Estuarine Water	IHDEILLLVREEKAQQWADQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH
Ga0222716_104755111	3300021959	Estuarine Water	LVREDKAQRWADQLKQVMETAESKWLGDIPPLAEPSIGKRWSEIH
Ga0222715_100586667	3300021960	Estuarine Water	EDKAQQLALQLKQVMENAEAKWLGDIPPLAEPSVGKRWSEIH
Ga0212025_10260984	3300022057	Aqueous	WAEHLKRVMEAAEAKWLGDIPALAEPQIGKRWSEAH
Ga0196907_1011101	3300022149	Aqueous	ILLLVKEDKAQYWAEQLKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH
Ga0196897_10422011	3300022158	Aqueous	YEKRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH
Ga0212020_10630021	3300022167	Aqueous	LVREGYEKRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH
Ga0196899_10328671	3300022187	Aqueous	VVKIAAAVHDELLLLVREDHAQWWAEHLKRVMEAAEAKWLGDIPALAEPQIGKRWSEAH
Ga0244775_105135754	3300024346	Estuarine	WAEHLKRVMEAAEAKWLGDIPAVAEPQIGKRWSEAH
Ga0208159_10133476	3300025101	Marine	KEDLADEWAQILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH
Ga0209348_11609203	3300025127	Marine	LADEWAQILKTTMEKAEAKWLGDVPALAEVSIGDKWSEVH
Ga0209232_12266191	3300025132	Marine	EDLADDWAEILKTTMENAEAKWLGDVPALAEVSIGDRWSEVH
Ga0209232_12541373	3300025132	Marine	WAATLKEVMEKAESKWLGKIPALAEVSIGKTWWEVH
Ga0208150_12460261	3300025751	Aqueous	VVLLVREGYEKRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH
Ga0208150_12721172	3300025751	Aqueous	ILLLVREGYEERWAAILKEVMEAAEAKWLGDIPALAEVNVGKRWSETH
Ga0208427_10296501	3300025771	Aqueous	LAAVVHDEVVLLVREGYEKRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH
Ga0208427_12207773	3300025771	Aqueous	EILLLVKEDKAQHWAAELKRIMESAEAKWLGEIPPLAEPSVGKRWSEIH
Ga0208785_10569024	3300025815	Aqueous	KAQHWADQLKQVMESAEAKWLGDIPPLAEPSVGKRWSEIH
Ga0208917_10754234	3300025840	Aqueous	VREGYEERWAAILKEIMEAAEAKWLGDIPALAEVNVGKRWSDTH
Ga0208645_12774361	3300025853	Aqueous	REGYENRWAEILKDVMEKAEAKWLGEIPALAEVHVGKTWSDVH
Ga0209309_100861645	3300025881	Pelagic Marine	IHDEILLLVREDKAQQWALQLKQVMESAEAKWLGDIPPLAEPSVGKRWSEIH
Ga0209929_11771072	3300026187	Pond Water	EGYEEKWAKILTDVMEQAEAKWLGDIPPLAEAHYGKTWAAAKG
Ga0208897_11238121	3300027571	Estuarine	WALQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH
Ga0209077_12070991	3300027675	Freshwater Sediment	IVLVREDKAEEWAEILTATMQDAEREWLGDVPALAEAGIGDSWDTAK
Ga0257110_10541381	3300028197	Marine	EDAAEEWAKTLKQVMEEAEAMWLGDIPALAEVSIGKTWMETH
Ga0183683_10284901	3300029309	Marine	VKEDIANEWAEILKETMEKAEAKWLGDVPALAEVSVGDKWSEVH
Ga0307380_111707573	3300031539	Soil	QWADQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH
Ga0307378_102954221	3300031566	Soil	EEKAQQWADQLKQVMESAEAKWLGDIPPLAEPSIGKRWSEIH
Ga0307377_106977933	3300031673	Soil	LVREEKAQQWADQLKHVMESAEAKWLGDIPPLAEPSIGKRWSEIH
Ga0315294_1009388011	3300031952	Sediment	DRAEEWAEILTATMQDAEREWLGDVPALAEAGIGDSWDTAK
Ga0348335_103032_2_160	3300034374	Aqueous	VHDEVVLLVREGYEKRWAEILKDVMERAEAKWLGDIPALAEVNVGKRWSDTH
Ga0348335_121314_615_773	3300034374	Aqueous	VRDQVVLLVRDEHAEWWAEHLKRVMEAAEAKWLGEIPALAEVGIGKTWDESH
Ga0348335_152017_1_114	3300034374	Aqueous	RWAAILKEIMEAAEAKWLGDIPALAEVNVGKRWSETH
Ga0348336_156690_509_667	3300034375	Aqueous	VHDEILLLVREGYEERWAAILKEIMEAAEAKWLGDIPALAEVNVGKRWSETH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences