NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F081210

Metagenome Family F081210

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081210
Family Type Metagenome
Number of Sequences 114
Average Sequence Length 63 residues
Representative Sequence MKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Number of Associated Samples 79
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 84.07 %
% of genes near scaffold ends (potentially truncated) 28.07 %
% of genes from short scaffolds (< 2000 bps) 78.07 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (86.842 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(66.667 % of family members)
Environment Ontology (ENVO) Unclassified
(92.105 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.842 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 44.44%    Coil/Unstructured: 55.56%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF00692dUTPase 5.26
PF01434Peptidase_M41 0.88
PF04285DUF444 0.88
PF07883Cupin_2 0.88
PF00478IMPDH 0.88
PF00155Aminotran_1_2 0.88
PF00149Metallophos 0.88
PF05063MT-A70 0.88
PF07432Hc1 0.88
PF04545Sigma70_r4 0.88
PF13419HAD_2 0.88
PF00462Glutaredoxin 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 5.26
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 5.26
COG4725N6-adenosine-specific RNA methylase IME4Translation, ribosomal structure and biogenesis [J] 1.75
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 0.88
COG2718Uncharacterized conserved protein YeaH/YhbH, required for sporulation, DUF444 familyGeneral function prediction only [R] 0.88


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A86.84 %
All OrganismsrootAll Organisms13.16 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000153|SI39nov09_135mDRAFT_c1015254Not Available1632Open in IMG/M
3300002484|JGI25129J35166_1004439Not Available4024Open in IMG/M
3300002488|JGI25128J35275_1043534Not Available996Open in IMG/M
3300002514|JGI25133J35611_10038070Not Available1728Open in IMG/M
3300002518|JGI25134J35505_10038753Not Available1271Open in IMG/M
3300002518|JGI25134J35505_10063510Not Available885Open in IMG/M
3300002760|JGI25136J39404_1062559Not Available692Open in IMG/M
3300005427|Ga0066851_10162478All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium710Open in IMG/M
3300005516|Ga0066831_10218868Not Available517Open in IMG/M
3300005521|Ga0066862_10085694Not Available1084Open in IMG/M
3300005521|Ga0066862_10186171Not Available690Open in IMG/M
3300005605|Ga0066850_10196115All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium732Open in IMG/M
3300006736|Ga0098033_1233414Not Available503Open in IMG/M
3300006738|Ga0098035_1000194All Organisms → cellular organisms → Bacteria32284Open in IMG/M
3300006738|Ga0098035_1035767Not Available1864Open in IMG/M
3300006738|Ga0098035_1091969Not Available1063Open in IMG/M
3300006738|Ga0098035_1222160Not Available626Open in IMG/M
3300006750|Ga0098058_1000287All Organisms → cellular organisms → Bacteria17092Open in IMG/M
3300006751|Ga0098040_1049711All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae1305Open in IMG/M
3300006751|Ga0098040_1059309Not Available1180Open in IMG/M
3300006751|Ga0098040_1078763Not Available1004Open in IMG/M
3300006752|Ga0098048_1177074Not Available632Open in IMG/M
3300006752|Ga0098048_1214439Not Available566Open in IMG/M
3300006753|Ga0098039_1012871Not Available3054Open in IMG/M
3300006753|Ga0098039_1093838All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp.1035Open in IMG/M
3300006754|Ga0098044_1034706Not Available2203Open in IMG/M
3300006754|Ga0098044_1042494Not Available1963Open in IMG/M
3300006789|Ga0098054_1006213All Organisms → cellular organisms → Bacteria5168Open in IMG/M
3300006789|Ga0098054_1316283Not Available557Open in IMG/M
3300006793|Ga0098055_1035275Not Available2060Open in IMG/M
3300006793|Ga0098055_1085549Not Available1238Open in IMG/M
3300006921|Ga0098060_1038184All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1446Open in IMG/M
3300006929|Ga0098036_1110905Not Available842Open in IMG/M
3300006929|Ga0098036_1183205Not Available637Open in IMG/M
3300007777|Ga0105711_1399403Not Available513Open in IMG/M
3300008050|Ga0098052_1030817All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon2439Open in IMG/M
3300008216|Ga0114898_1013420Not Available3039Open in IMG/M
3300008217|Ga0114899_1083776Not Available1091Open in IMG/M
3300009108|Ga0117920_1003965Not Available10805Open in IMG/M
3300009129|Ga0118728_1012152Not Available6383Open in IMG/M
3300009129|Ga0118728_1038175Not Available2663Open in IMG/M
3300009129|Ga0118728_1064589Not Available1801Open in IMG/M
3300009129|Ga0118728_1070844Not Available1686Open in IMG/M
3300009130|Ga0118729_1002571All Organisms → cellular organisms → Bacteria19508Open in IMG/M
3300009173|Ga0114996_10454237Not Available973Open in IMG/M
3300009409|Ga0114993_11155294Not Available546Open in IMG/M
3300009418|Ga0114908_1135046Not Available801Open in IMG/M
3300009418|Ga0114908_1260493Not Available523Open in IMG/M
3300009425|Ga0114997_10769038Not Available502Open in IMG/M
3300009512|Ga0115003_10734717Not Available574Open in IMG/M
3300009619|Ga0105236_1065156Not Available503Open in IMG/M
3300009620|Ga0114912_1169034Not Available507Open in IMG/M
3300009786|Ga0114999_11284413Not Available519Open in IMG/M
3300010149|Ga0098049_1195279Not Available620Open in IMG/M
3300010151|Ga0098061_1117464Not Available981Open in IMG/M
3300010151|Ga0098061_1343016Not Available508Open in IMG/M
3300010153|Ga0098059_1013976All Organisms → cellular organisms → Bacteria3326Open in IMG/M
3300010153|Ga0098059_1096303Not Available1176Open in IMG/M
3300010153|Ga0098059_1223726Not Available729Open in IMG/M
3300010153|Ga0098059_1260078Not Available668Open in IMG/M
3300010155|Ga0098047_10054418Not Available1579Open in IMG/M
3300012950|Ga0163108_11106115Not Available511Open in IMG/M
3300012952|Ga0163180_10739113Not Available764Open in IMG/M
3300013114|Ga0171650_1094473Not Available950Open in IMG/M
3300017706|Ga0181377_1037849Not Available966Open in IMG/M
3300017775|Ga0181432_1022891Not Available1630Open in IMG/M
3300017775|Ga0181432_1199225Not Available627Open in IMG/M
3300017775|Ga0181432_1283051Not Available525Open in IMG/M
3300020447|Ga0211691_10203216Not Available764Open in IMG/M
3300020451|Ga0211473_10550346Not Available586Open in IMG/M
3300022227|Ga0187827_10844181Not Available502Open in IMG/M
(restricted) 3300024261|Ga0233439_10247405Not Available790Open in IMG/M
3300025046|Ga0207902_1034609Not Available623Open in IMG/M
3300025052|Ga0207906_1052364Not Available545Open in IMG/M
3300025066|Ga0208012_1004175Not Available3066Open in IMG/M
3300025066|Ga0208012_1009179Not Available1812Open in IMG/M
3300025072|Ga0208920_1008686Not Available2313Open in IMG/M
3300025096|Ga0208011_1054067Not Available922Open in IMG/M
3300025096|Ga0208011_1075048Not Available747Open in IMG/M
3300025096|Ga0208011_1108639Not Available583Open in IMG/M
3300025096|Ga0208011_1130046All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium514Open in IMG/M
3300025097|Ga0208010_1030904Not Available1254Open in IMG/M
3300025097|Ga0208010_1117626Not Available536Open in IMG/M
3300025103|Ga0208013_1107050Not Available700Open in IMG/M
3300025108|Ga0208793_1075088Not Available985Open in IMG/M
3300025112|Ga0209349_1001984Not Available9926Open in IMG/M
3300025112|Ga0209349_1017313Not Available2612Open in IMG/M
3300025122|Ga0209434_1036575Not Available1578Open in IMG/M
3300025122|Ga0209434_1071419Not Available1032Open in IMG/M
3300025125|Ga0209644_1076858Not Available780Open in IMG/M
3300025128|Ga0208919_1049475All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1447Open in IMG/M
3300025131|Ga0209128_1006101Not Available6708Open in IMG/M
3300025132|Ga0209232_1007988All Organisms → Viruses → Predicted Viral4497Open in IMG/M
3300025133|Ga0208299_1178834Not Available644Open in IMG/M
3300025141|Ga0209756_1002846Not Available14524Open in IMG/M
3300025141|Ga0209756_1188250All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium799Open in IMG/M
3300025251|Ga0208182_1002667Not Available6983Open in IMG/M
3300027714|Ga0209815_1205828Not Available606Open in IMG/M
(restricted) 3300027837|Ga0255041_10094365Not Available986Open in IMG/M
3300027844|Ga0209501_10534758Not Available665Open in IMG/M
3300027847|Ga0209402_10454234Not Available758Open in IMG/M
(restricted) 3300027996|Ga0233413_10027680Not Available2132Open in IMG/M
3300031605|Ga0302132_10462126Not Available563Open in IMG/M
3300031757|Ga0315328_10241741Not Available1057Open in IMG/M
3300031757|Ga0315328_10324708Not Available898Open in IMG/M
3300031757|Ga0315328_10855472Not Available506Open in IMG/M
3300031775|Ga0315326_10695682Not Available640Open in IMG/M
3300031775|Ga0315326_10762992Not Available605Open in IMG/M
3300031800|Ga0310122_10057979Not Available2042Open in IMG/M
3300031886|Ga0315318_10363078Not Available830Open in IMG/M
3300032032|Ga0315327_10600860Not Available679Open in IMG/M
3300032048|Ga0315329_10341138Not Available797Open in IMG/M
3300032278|Ga0310345_11776621Not Available601Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine66.67%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater7.02%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine6.14%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.26%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.51%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.63%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.75%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.75%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.88%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.88%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.88%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.88%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.88%
Diffuse Vent Fluid, Hydrothermal VentsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents0.88%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000153Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135mEnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005516Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49BEnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007777Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS918_NRZ_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300009108Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300009129Combined Assembly of Gp0139513, Gp0139514EnvironmentalOpen in IMG/M
3300009130Combined Assembly of Gp0139511, Gp0139512EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300013114Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024261 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MGEnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027837 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI39nov09_135mDRAFT_101525423300000153MarineVKPGDLVRQAPNIFADQEVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELEVYSG*
JGI25129J35166_100443983300002484MarineMKPGDLVKQAPNIFTDRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR*
JGI25128J35275_104353423300002488MarineMKPGDLVRQAPNIFADREVAGKKMLVLRVDKWEAGNPNTTVVTLLEGKEITWNYGELEVVYETR*
JGI25133J35611_1003807013300002514MarineTVTMELFPRHQKVWSYSVKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
JGI25134J35505_1003875323300002518MarineMELFPRHQKVWSYSVKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR*
JGI25134J35505_1006351043300002518MarineMKPGDLVRQAPNIFTDREVAGKKMLVLKVMDGGPNRGKTVLTLLEGKERIWHYGELELWRETR*
JGI25136J39404_106255933300002760MarineMKPGDLVRQAPNIFTDRDIGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0066851_1016247843300005427MarineMKPGDLVRQAPNIFTDRDVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0066831_1021886823300005516MarineMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKQRVWHYGELELWRET*
Ga0066862_1008569423300005521MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR*
Ga0066862_1018617113300005521MarineMKPGDLVRQAPNIFADREVAGKKMLVLKIMPGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0066850_1019611543300005605MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098033_123341423300006736MarineVKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR*
Ga0098035_100019413300006738MarineITELLCRWHKPWRSSVKPGDLVKQAPNIFAARDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098035_103576763300006738MarineMELFPRHQKVWSYSVKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR*
Ga0098035_109196963300006738MarineIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098035_122216033300006738MarineMKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRET
Ga0098058_100028733300006750MarineVKPGDLVKQAPNIFAARDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098040_104971143300006751MarineMKPGDLVKQAPNIFTDRDVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWR
Ga0098040_105930923300006751MarineMKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELVSETR*
Ga0098040_107876333300006751MarineMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098048_117707423300006752MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLAGKERVWHYGELELWREA*
Ga0098048_121443913300006752MarineRQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098039_1012871133300006753MarinePNIFTDRDIGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098039_109383853300006753MarineVKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098044_103470673300006754MarineMKAGDLVKQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098044_104249463300006754MarineMKPGDLVRQAPNIFTDRDVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR*
Ga0098054_100621313300006789MarineMKPGDLVRQAPNIFTDRDVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWR
Ga0098054_131628333300006789MarineVKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWR
Ga0098055_103527573300006793MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR*
Ga0098055_108554973300006793MarineSVKPGDLVKQAPNIFAARDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098060_103818423300006921MarineMKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR*
Ga0098036_111090553300006929MarineMKPGDLVKQAPNIFADREVAGKKMLVLIVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR*
Ga0098036_118320523300006929MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0105711_139940313300007777Diffuse Vent Fluid, Hydrothermal VentsMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098052_103081753300008050MarineMKPGDLVIQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKQRVWHYGELELWRET*
Ga0114898_101342083300008216Deep OceanMKPGDLVRQAPNIFSDREVAGKKMLVIKVIEGGSHRSETVLTLLEGKERTWHYGELELWRETR*
Ga0114899_108377613300008217Deep OceanVKPGDLVRQAPNIFADRKVAGKKMLVIKVIEGGSHRSETVLTLLEGKERTWHYGELELWRETR*
Ga0117920_100396593300009108MarineMKPGDLVRQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0118728_101215213300009129MarineMKPGDLVRQAPNIFADRKVAGKKMLVLEVMDGGPNHGETVRTLLEGKERVWHYGELELWRETR*
Ga0118728_103817513300009129MarinePNIFTDRKVGGKKMLVLKVMEGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0118728_106458963300009129MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVW
Ga0118728_107084413300009129MarineAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWSEA*
Ga0118729_1002571463300009130MarineVRPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGTERVWHYGELELW
Ga0114996_1045423733300009173MarineMELFPHHQKVWSYSVKPGDLVRQAPNIFSDRKVAGKKMLVLKVNEWGPGNPNTKVVTLLEGKERTWNYGELELWRETR*
Ga0114993_1115529423300009409MarineMELFPRHQKVWSYSVKPGDLVRQAPNVFSDREVAGKKMLVLKVTEVRAGWGETVVTLLEGKERTWHYGELELWRETR*
Ga0114908_113504623300009418Deep OceanMKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELAVTNETR*
Ga0114908_126049333300009418Deep OceanMKPGDLVKQAPNVFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0114997_1076903823300009425MarineVKPGDLVRQAPNIFSDRKVAGKKMLVLKVNEWGPGNPNTKVVTLLEGKERTWNYGELELWRETR*
Ga0115003_1073471723300009512MarineWSYSVKPGDLVRQAPNIFSDRKVAGKKMLVLKVNEWGPGNPNTKVVTLLEGKERTWNYGELELWRETR*
Ga0105236_106515623300009619Marine OceanicMKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0114912_116903433300009620Deep OceanMKPGDLVRQAPNIFSDREVAGKKMLVIKVIEGGSHRSETVLTLLEGKERIWHYGELAVTNETR*
Ga0114999_1128441323300009786MarineVKPGDLVRQAPNVFSDREVAGKKMLVLKVTEVRSGWGETVVTLLEGKERTWHYGELELWRETR*
Ga0098049_119527913300010149MarineAPNIFTDRDVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098061_111746453300010151MarineMKPGDLVRQAPNIFADREVAGKKMLVLKIMPGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098061_134301613300010151MarineMKPGDLVKQAPNIVADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGE
Ga0098059_101397623300010153MarineMKPGDLVRQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLAGKERVWHYGELELWREA*
Ga0098059_109630313300010153MarineTTAASFIPSHQWSYSMKPGDLVRQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR*
Ga0098059_122372633300010153MarineIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR*
Ga0098059_126007823300010153MarineMKPGDLVRQAPNIFADRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0098047_1005441843300010155MarineVKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0163108_1110611533300012950SeawaterMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWH
Ga0163180_1073911333300012952SeawaterMKPGDLVRQAPNIFADREVGGKKMLVLRVDKWHAGQPNTTVVTLLDGKERTWNYTELEVVHETR*
Ga0171650_109447313300013114MarineVRPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR*
Ga0181377_103784933300017706MarineMKPGDLVRQAPNIFADREVAGKKMLVLRVDKWEAGNPNTTVVTLLEGKEITWNYGELEVINETR
Ga0181432_102289133300017775SeawaterMKPGDLVRQAPNVFSDRKVGGKKMLVLKIIDGGPNRGETVLTLLEGKERIWHYGELELFRGTR
Ga0181432_119922533300017775SeawaterLASNASVNWRFLMKPGDLVRQAPNIFADREVSGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0181432_128305113300017775SeawaterMKPGDLVRQAPNIFADRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0211691_1020321613300020447MarineMKPGDLVRQAPNIFSDREVAGKKMLVLKVMDGGSHRGETVVTLLEGKERIWHYGELELWRETR
Ga0211473_1055034633300020451MarineMKPGDLVRQAPNIFADREVGGKKMLVLRVDKWHAGQPNTTVVTLLDGKERTWNYTELEVVHETR
Ga0187827_1084418113300022227SeawaterKVWSYSVKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
(restricted) Ga0233439_1024740533300024261SeawaterMKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0207902_103460923300025046MarineMKPGDLVRQAPNIFSDREVAGKKMLVIKVIDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0207906_105236413300025052MarineMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERTWHYGELELWRETR
Ga0208012_1004175103300025066MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELW
Ga0208012_100917953300025066MarineVKPGDLVKQAPNIFAARDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0208920_100868673300025072MarineMELFPRHQKVWSYSVKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR
Ga0208011_105406733300025096MarineMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0208011_107504823300025096MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR
Ga0208011_110863923300025096MarineMKPGDLVRQAPNIFTDRDVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0208011_113004623300025096MarineMKAGDLVKQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0208010_103090413300025097MarineNIFAARDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0208010_111762633300025097MarineMELFPRHQKVWSYSVKPGDLVKQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0208013_110705033300025103MarineVKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRET
Ga0208793_107508843300025108MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWR
Ga0209349_100198473300025112MarineMKPGDLVKQAPNIFTDRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR
Ga0209349_101731323300025112MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGEAVLTLLEGKERIWHYGELELWRESR
Ga0209434_103657553300025122MarineMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVMTLLEGKERIWHYGELELWRETR
Ga0209434_107141953300025122MarineVKPGDLVRQAPNIFSDRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0209644_107685833300025125MarineMKPGDLVRQAPNIFTDRDIGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0208919_104947543300025128MarineMKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWREAR
Ga0209128_100610183300025131MarineMELFPRHQKVWSYSVKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0209128_106177313300025131MarineMKPGDLVKQAPNIFTDRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLW
Ga0209232_100798893300025132MarineMKPGDLVRQAPNIFADREVAGKKMLVLRVDKWEAGNPNTTVVTLLEGKEITWNYGELEVVYETR
Ga0208299_117883433300025133MarineMKPGDLVIQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRET
Ga0209756_1002846213300025141MarineMKPGDLVRQAPNIFTDREVAGKKMLVLKVMDGGPNRGKTVLTLLEGKERIWHYGELELWRETR
Ga0209756_118825033300025141MarineMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERLWHYGELELWRETR
Ga0208182_1002667203300025251Deep OceanMKPGDLVRQAPNIFSDREVAGKKMLVIKVIEGGSHRSETVLTLLEGKERTWHYGELELWRETR
Ga0209815_120582823300027714MarineMKPGDLVRQAPNIFSDREVAGKKMLVLKVIDGGSHRGETVLTLLEGKERTWHYGELELWREAR
(restricted) Ga0255041_1009436533300027837SeawaterMKPGDLVRQAPNIFSDRGVAGKQMLVLKIDEAPERTLVTTMLEGKEREWHYEELEVVSEA
Ga0209501_1053475823300027844MarineMELFPHHQKVWSYSVKPGDLVRQAPNIFSDRKVAGKKMLVLKVNEWGPGNPNTKVVTLLEGKERTWNYGELELWRETR
Ga0209402_1045423413300027847MarineMELFPHHQKVWSYSVKPGDLVRQAPNIFSDRKVAGKKMLVLKVNEWGPGNPNTKVVTLLEGKERTWNYG
(restricted) Ga0233413_1002768053300027996SeawaterVKPGDLVRQAPNIFADQEVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELEVYS
Ga0302132_1046212623300031605MarineVKPGDLVRQAPNIFSDRKVAGKKMLVLKVNEWGPGNPNTKVVTLLEGKERTWNYGELELWRETR
Ga0315328_1024174113300031757SeawaterMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0315328_1032470823300031757SeawaterMKPGDLVKQAPNIFADREVAGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0315328_1085547213300031757SeawaterVKPGDLVRQAPNIFSDRGVAGKKMLVLKIDEAPERTLVTTMLEGKEREWHYGELELWRET
Ga0315326_1069568223300031775SeawaterMKPGDLVRQAPNIFADRKVAGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR
Ga0315326_1076299223300031775SeawaterMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERIWHYGELELWRETG
Ga0310122_10057979103300031800MarineMKPGDLVRQAPNIFSDREVAGKKMLVLKVKEWGPGNPNTKVVTLLEGKERTWNY
Ga0315318_1036307843300031886SeawaterVKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRESR
Ga0315327_1060086023300032032SeawaterMKPGDLVRQAPNIFADRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETG
Ga0315329_1034113833300032048SeawaterMKPGDLVRQAPNIFADREVSGKKMLVLKIMDGGPNRGETVLTLLEGKERIWHYGELELWRETR
Ga0310345_1177662113300032278SeawaterMKPGDLVRQAPNIFTDRDVGGKKMLVLKVMDGGPNRGETVLTLLEGKERVWHYGELELWRETR


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