Metagenome / Metatranscriptome Family F081192

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081192
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	136 residues
Representative Sequence	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIA
Number of Associated Samples	95
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	96.49 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.439 % of family members)
Environment Ontology (ENVO)	Unclassified (30.702 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.14% β-sheet: 19.50% Coil/Unstructured: 38.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00486	Trans_reg_C	90.35
PF00672	HAMP	1.75
PF00300	His_Phos_1	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.84 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	83.33 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	83.33 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	83.33 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	0.88 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	83.33 %
Amycolatopsis nigrescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis nigrescens	0.88 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	0.88 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig805011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
2170459016\|G1P06HT01CWEIV	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300000956\|JGI10216J12902_103499469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300000956\|JGI10216J12902_105294819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300000956\|JGI10216J12902_109460934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300000956\|JGI10216J12902_110069026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300000956\|JGI10216J12902_115703969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300000956\|JGI10216J12902_118381036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300000956\|JGI10216J12902_120711537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300002568\|C688J35102_120583552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1207	Open in IMG/M
3300002568\|C688J35102_120730149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1437	Open in IMG/M
3300004081\|Ga0063454_100075772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1485	Open in IMG/M
3300004114\|Ga0062593_102351866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300004114\|Ga0062593_103179595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300004479\|Ga0062595_100029927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2222	Open in IMG/M
3300004479\|Ga0062595_100484369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300004479\|Ga0062595_100670332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300004643\|Ga0062591_102352146	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005093\|Ga0062594_100666460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300005172\|Ga0066683_10813996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300005179\|Ga0066684_10683656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300005186\|Ga0066676_10763599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005187\|Ga0066675_10417283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300005187\|Ga0066675_10675012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300005365\|Ga0070688_100994215	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005439\|Ga0070711_101224186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300005445\|Ga0070708_100333388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1429	Open in IMG/M
3300005447\|Ga0066689_11003321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300005458\|Ga0070681_11741198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	550	Open in IMG/M
3300005467\|Ga0070706_100087776	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300005467\|Ga0070706_100874410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300005540\|Ga0066697_10437412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300005545\|Ga0070695_101144364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300005559\|Ga0066700_10933316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005574\|Ga0066694_10233057	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005576\|Ga0066708_10933469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005617\|Ga0068859_101880128	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005764\|Ga0066903_105552949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300005841\|Ga0068863_102524323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300006034\|Ga0066656_11057923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300006046\|Ga0066652_100362975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308	Open in IMG/M
3300006048\|Ga0075363_100908550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300006755\|Ga0079222_10304137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300006791\|Ga0066653_10230747	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006804\|Ga0079221_10332742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300006844\|Ga0075428_101152949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300006904\|Ga0075424_101764178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300006904\|Ga0075424_102643802	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300009012\|Ga0066710_101349415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300009012\|Ga0066710_102127806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300009156\|Ga0111538_13750828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300009162\|Ga0075423_12172731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300009789\|Ga0126307_10987741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300010039\|Ga0126309_10190972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300010301\|Ga0134070_10367840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300010304\|Ga0134088_10532485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300010333\|Ga0134080_10347834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300010359\|Ga0126376_12457218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300010375\|Ga0105239_11765448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300012014\|Ga0120159_1111132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300012200\|Ga0137382_10165585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1506	Open in IMG/M
3300012208\|Ga0137376_10247145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1547	Open in IMG/M
3300012212\|Ga0150985_121099061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300012356\|Ga0137371_11427094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012401\|Ga0134055_1199128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012941\|Ga0162652_100072981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012960\|Ga0164301_11698190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012961\|Ga0164302_10784293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300012985\|Ga0164308_12113068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300013308\|Ga0157375_13188473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300013772\|Ga0120158_10408101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300015371\|Ga0132258_13913347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300015372\|Ga0132256_100495154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1332	Open in IMG/M
3300017654\|Ga0134069_1196641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300017659\|Ga0134083_10340416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300018028\|Ga0184608_10053582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1595	Open in IMG/M
3300018054\|Ga0184621_10038477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1559	Open in IMG/M
3300018071\|Ga0184618_10452996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300018076\|Ga0184609_10397885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300018431\|Ga0066655_11396200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300018482\|Ga0066669_10157235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1682	Open in IMG/M
3300019279\|Ga0184642_1101266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300019887\|Ga0193729_1089990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300020001\|Ga0193731_1088312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300020059\|Ga0193745_1062671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300021078\|Ga0210381_10228841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300025927\|Ga0207687_10781782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300025939\|Ga0207665_11449229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis nigrescens	546	Open in IMG/M
3300026552\|Ga0209577_10796534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300028715\|Ga0307313_10214188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300028718\|Ga0307307_10059608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300028719\|Ga0307301_10063846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1143	Open in IMG/M
3300028719\|Ga0307301_10245050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300028755\|Ga0307316_10012935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2605	Open in IMG/M
3300028768\|Ga0307280_10321818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300028778\|Ga0307288_10086759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300028787\|Ga0307323_10058495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1363	Open in IMG/M
3300028787\|Ga0307323_10380639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300028791\|Ga0307290_10062055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1353	Open in IMG/M
3300028793\|Ga0307299_10394053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300028796\|Ga0307287_10129853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300028799\|Ga0307284_10021253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2082	Open in IMG/M
3300028807\|Ga0307305_10068500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1638	Open in IMG/M
3300028807\|Ga0307305_10231453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300028807\|Ga0307305_10406429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300028811\|Ga0307292_10164283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300028814\|Ga0307302_10416634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300028824\|Ga0307310_10067313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1530	Open in IMG/M
3300028828\|Ga0307312_10689393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300028881\|Ga0307277_10189201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300028881\|Ga0307277_10234839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300030511\|Ga0268241_10104233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300031716\|Ga0310813_10838246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300032174\|Ga0307470_11211310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.84%
Host-Associated	Host-Associated	12.28%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.58%
Plants	Host-Associated → Plants	12.28%
Aquatic	Environmental → Aquatic	5.26%
Solid Waste	Engineered → Solid Waste	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.89%
Sediment	Environmental → Aquatic → Sediment	3.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.51%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.88%
Roots	Host-Associated → Plants → Roots	0.88%
Grass	Engineered → Solid Waste → Grass	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.18%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.51%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.88%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%
Composting	Engineered → Solid Waste → Grass → Composting	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.88%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_16863990	2124908045	Soil	VTSLQGRLRLAIGLAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLLPDSPTGRITINGRDYLYATKPSGSDVVVLLRTA
2ZMR_04414860	2170459016	Switchgrass, Maize And Mischanthus Litter	MNSLQARLRLTIGAAVLAAVSLSLLVGAYLVRRSLEQGAFAGLQRQVALLADEHVHPPAGSFGRFLATQDERLSVLPQKQARLLVPDRPSGRITINGHDYLYATNEQRHRRRRLLAHRDARARV
JGI10216J12902_1034994691	3300000956	Soil	VLAAVSVSLLAGAYLVRRSIEHTALTGLRRQVALLAEENLHPTGGELGRFLSTQDERLSVLPRRQATLLLPDSPSGRITVNGRDYFYASTPSGPDVVVLLRTASSVRSDSRPFWWALAA
JGI10216J12902_1052948192	3300000956	Soil	VNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADENVHPPAGSFGRFLATQDERLSVLPSKQARLLLPDRLTGRITINGHNYLYATKRSGGDVVALLRTASSVRAESIPFWIALGAAGA
JGI10216J12902_1094609341	3300000956	Soil	VSSLQSRLRLAIGAAVLAAVSLSLLLGAYLVRRSLERSAFDGLRRQVALLAHEDLRPPHGMFGRFLATQDERLSVLPKKQARLLLPDSPTGRISINGHDYFYATKIAGPDVVVLLRTARSVRAESRPFWI
JGI10216J12902_1100690261	3300000956	Soil	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLERSAFDGLRRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQARLLLPDRVDGRITINDRKYLYATRSSAGETVVLLRTASSVRA
JGI10216J12902_1157039691	3300000956	Soil	VLVAVSVSLLAGAYLVRRSVEHNALTGLRRQVALLGKEDLHPAAGPLGRFLTTQDERLSVLPRAQARLLLPDRSAGRMKVNGREYLYATRPSGDEVVVLLRTASSVRADSRPFWFALAAAGALGC
JGI10216J12902_1183810362	3300000956	Soil	MSLQTRLRLSIGAAVLLAVSLSLLAGAYLVRRSLEHAAFSGLQRQVALLGHEDLHPAPGQFGRFLATQDERLSVLPKKQARLLLPESRTGRITIKGRDYLYATRESGSDVVVLLRTASSVRSESRPFWIALLAAGGLGCLLAVAVAAMLARSIARPVLRVARASSLL
JGI10216J12902_1207115372	3300000956	Soil	VSSLQGRLRLAIGGSVLAAISLSLLLGAYLVRRSLEHSAFTGLQRQVVLLAHGDLHPEPGQFGRFLATQDERVSVLPRRQARLLVPPRPAGRIAINGRDYLYATATSGRDVVVLLRTASSVRAESRPFWMALAAAG
C688J35102_1205835521	3300002568	Soil	VSSLQARLRLAIGVAVLAAVSLSLLVGAYLVRRSLEASAFNGLRRQVALLGHEDLHPPHGAFGRFLATQDERLTVLPRKQARLLLPDARTGRLNINGREYLYATKTAGGGDVVLLLRTTSSVRAESRPFWIALA
C688J35102_1207301493	3300002568	Soil	VSVSLLAGAYLVRRSIEDNALSGLRRQVALLANENLHPSAGPLGRFLTTQDERLSVLPRRQAELLLPDGTSGRLTVNGRDYLYARKSSGTDVVVLLRTASSVRADSRPFWVALAAAGGLGCLLAAVVAWVLARGIARPVVRVADAS
Ga0063454_1000757723	3300004081	Soil	VSVSLLAGAYLVRRSIEDNALSGLRRQVALLANENLHPSAGPLGRFLTTQDERLSVLPRRQAELLLPDGTSGRLTVNGRDYLYARKSSGTDVVVLLRTASSVRADSRPFWVALAAAGGLGCLLAAVVAWVLARGIARPVVRVAD
Ga0062593_1023518662	3300004114	Soil	VVSLQARLRLAIGVSVLAAVALSLFVGAYLVRRSLEQSAFHGLERQIALLAHEDLHPTSGQIGRFLATQDERLSVLPREQARLLLPPSPTGRITINGRKYLYATKASGQDVVVLLRTASSVRAESTPFWVAFIAAGVLGSLLAIVVAA
Ga0062593_1031795951	3300004114	Soil	VSSLQARLLLAIGASVLAAVSVSLLVGAFFVRRSLEHNAFTGLQRQARLLAQGDLHPGPGQLGRFLATQDERLSILPRQQARLLVPGGPTGRIAVNGTEYLYATQPSGRDVVVLLRTARSVRAESRPFWVALLIAGGLGCVLAVAVAAALARG
Ga0062595_1000299274	3300004479	Soil	VISLQTRLRLSIGVAVLLAVSLSLLVGAYLVRRSLEHAAFSGLQRQVALLGHEDLHPAPGQFGRFLATQDERLSVLPKQQARLLLPESRTGRITIKGRDYLYATRESGSDVVVLLRTAS
Ga0062595_1004843691	3300004479	Soil	VSSLQTRLRLAIGAAVLAAVSLSLLVGAYLVRRSFEQSAFDGLRRQVALLAHEDLQPAPGSFGRFLATQDERLSVLSAKQARLLLPKSPTGRIVINGREYLYATRSSAQNAVVLLRTASSVRAESRPFWIAFATAGGLGCLLAIALAAAL
Ga0062595_1006703322	3300004479	Soil	MSLQRRLGLAITAAVLVSVSVSTLAGAFLVRRSIEHAGLNGLQRQLALLANVDLQPSAGPFGRFLATQDERLSVLPRAQAQLLLPGGSAGRINVNGRDYLYATRVVGPNTIILLRTASSVSSASRPFWFA
Ga0062591_1023521461	3300004643	Soil	VSSLQTRLRLAIGASVLAAVSVSLLVGAFFVRRSLEQNAFSGLQRQVRLLAQGDLHPAPGQFGRFLATQDERLSILPKRQARLLVPGGPTGRITVNGHEYLYATQPSGPDVVVLLRTARSVRAES
Ga0062594_1006664601	3300005093	Soil	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLEQSAFDGLRRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQARLLLPDKVDGRITINDRKYLYATRSSGGETLV
Ga0066683_108139962	3300005172	Soil	VNSLQSRLRLAVGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGPRRQVALLADDQLHPPAGSFGRFLATQDERLSVLPQKQARLLVPDRPTGRITINGRDYLYATKRSGNDVVVLLRTASSVRAANRPFWI
Ga0066684_106836562	3300005179	Soil	MSLQTRLGLAIGAAVLAAVSVSLLAGAYLVRRSIEHAALNGLRRQVGLLAKEDLQPSPGPLGRFLATQDERLSVLPRRQAELLLPGRSAAGRIRIHGRDYLYATRTSGPDAVILLRTATSVGSDSRPFWFA
Ga0066676_107635991	3300005186	Soil	VNSLQSRLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPQKQARLLVPDRPTGRITINGRNYLYATKRSGTDVVVLLRTASSVRAESKPFWIAFAAAGILGCLLA
Ga0066675_104172831	3300005187	Soil	VNSLQSRLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEHVHPPAGSFGRFLATQDERLSVLPRKQAQLLVPDHPTGRITINGRKYLYATKSSGGDVV
Ga0066675_106750122	3300005187	Soil	VISLQTRLRLSIGVAVLLAVSLSLLVGAYLVRRSLEHAAFNGLQRQVALLGHEDLHPAAGQFGRFLATQDERLSVLPKQQARLLLPESRTGRITIKGRDYLYATRESGSDVVVLLRTASSVRSESRPFWIALLAAGGLGCLLAVAVAAMLARSIARPVLRVA
Ga0070688_1009942152	3300005365	Switchgrass Rhizosphere	VSSLQTRLRLAIGASVLAAVSVSLLVGAFFVRRSLEQNAFSGLQRQVRLLAQGDLHPAPGQFGRFLATQDERLSILPKRQARLLVPGGPTGRITVNGHEYLYATQPSGPDAVVLLRTARSVRAES
Ga0070711_1012241862	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLEQSAFDGLRRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQARLLLPDKVEGRITINDRKYLYATRSSGGET
Ga0070708_1003333881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEHVHPPAGSFGRFLATQDERLSVLPRRQARLLVPDRPTGRIAINGRDYLYATKSSGSDVVVLLRTASSVRAESKPFWIAFAAAGILGCILAAGVAALLA
Ga0066689_110033211	3300005447	Soil	MSLQTRLGLAIGAAVLAAVSVSLLAGAYLVRRSVEHAGLNGLRRQVALLANEDLHPSAGPLGRFLATQDERLSVLPRRQARLLLPGGSAGRITVHGRDYLYATQTSGPDAVILLRTASS
Ga0070681_117411981	3300005458	Corn Rhizosphere	SDRSRRRLPDSRGVSSLQTRLRLAIGASVLAAVSVSLLVGAFFVRRSLEQNAFSGLQRQVRLLAQGDLHPAPGQFGRFLATQDERLSILPKRQARLLVPGGPTGRITVNGHEYLYATQPSGPDVVVLLRTARSVRAESRPFWVALLIAGGLGSLLAVLVAAALARSIAAPIVRVARASRRLAD
Ga0070706_1000877765	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSLQTRLRLAIGAAVLAAVSVSLLAGAYLVRRSIEQTAFSGLKRQVALLAHEDLHPAPGPLGRFLATQDERLSVLPRQQARLLLPNSSTGRITINGHDYLYATQPSGRDVVVLLRTAESVRSDSRPFWF
Ga0070706_1008744102	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEHVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDRPTGRIAINGRDYLYATKSSGSDVVVLLRTASSVRAESKPFWIAFAAAGILGCILAAGVAALLARSIS
Ga0066697_104374121	3300005540	Soil	VISLQTRLRLSIGAAVLLAVSLSLLVGAYLVRRSLEHAAFSGLQRQVALLGHEDLHPAPGQFGRFLATQDERLSVLPKQQARLLLPESRTGRITIKGRDYLYATRESGSDVVVLLRTASSVRSESRPF
Ga0070695_1011443641	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLQTRLRLAIGLAVLVAVSLSLLVGAYLVRRSLEQTAFGGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPESPTGRITINERDYLYATKESGRDIVVLLRTASSVRAESRPFWMALVAAGAIGCLLAAAVATTLARGIARPVLRVARA
Ga0066700_109333162	3300005559	Soil	VLAAVSVSLLAGAYLVRRSIEHAALNGLRRQVALLANEDLHPSSGPLGRFLTTQDERLSVLPRRQARLLLPDSPAGRITINGRDYLYAIRASGADVVLLLRTASSVRSDSRPFWFALAAA
Ga0066694_102330571	3300005574	Soil	VNSLQSRLWLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGPFGRFLATQDERLSVLPRKQARLLLPDRPTGRITINARSYLYATEPSGRDVVVLL
Ga0066708_109334692	3300005576	Soil	VSSLQARLRLAIGAAVLGAVSLSLLFGAYLVRRSLEQSAFNGLRRQVALLADESVHPPAGSFGRFLATQDERLTVLPAKQARLLLPARKTGRITINGRDYLYATEKSSTDIVVLLRTTSSVRAESRPFWIALAAAGALGCMV
Ga0068859_1018801282	3300005617	Switchgrass Rhizosphere	MVSLQARLRLAIGVSVLAAVALSLFVGAYLVRRSLEQSAFHGLERQIALLAHEDLHPTSGQIGRFLATQDERLSVLPQEQARLLLPPGPTGRITINGRKYLYATKTTGQDVVVLLRTASSVRAESTPFWVAFIAAGALGSLLAIVVAAVLARSIARPVLRVARASRSLAEGRDPGPLPLAGPTEV
Ga0066903_1055529491	3300005764	Tropical Forest Soil	VSSLQSRLLLAIGASVLTAVSVSLLVGAFFVRRSLEQNAFNGLERQARLLAQGDIHPAPGQLGRFLATQDERLSVLPKQQAKLLVPPQPTGRIEIDGREYLYATEPSGRNVVVLLRTVSSVRAERRSFWAALAIAGALGCVLAV
Ga0068863_1025243231	3300005841	Switchgrass Rhizosphere	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLEQSAFDGLRRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQARLLLPDEVDGRITINDREYLYATRSSGGETVVLLRTA
Ga0066656_110579231	3300006034	Soil	MSLQTRLGLAIGAAVIVAVSLSLLAGAYLVRRSIEHAALNGLRRQVALLANEDLHPSPGPLGRFLATQDERLSVLPRRQARLLLPDGSAGRVTVNGRDYLYATRTSGADAITLLRTASSVSSDSRPFWFALAA
Ga0066652_1003629751	3300006046	Soil	VISLQTRLRLSIGVAVLLAVSLSLLVGAYLVRRSLEHAAFNGLQRQVALLGHEDLHPAAGQFGRFLATQDERLSVLPKQQARLLLPESRTGRITIKGRDYLYATRESGSDVVVL
Ga0075363_1009085501	3300006048	Populus Endosphere	MVSLQARLRLAIGVSVLAAVALSLFVGAYLVRRSLEQSAFHGLERQIALLAHEDLHPTSGQIGRFLATQDERLSVLPQEQARLLLPPGPTGRITINGRKYLYATKTTGQDVVVLLRTASSVRAESTPFWVAFIAAGALG
Ga0079222_103041371	3300006755	Agricultural Soil	VSSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVSLLADEQVHPPAGSFGRFLATQDERLSVLPRRQARLLVPDRRTGRITINGRKYLYATESSGADVVVLLRTASSVRAE
Ga0066653_102307471	3300006791	Soil	VSSLRTRLRLAIGAAVVAAVSLSLLAGAYLVRRSLEQSAFDGLRRQVALLAHDDLHPPPGAFGRFLATQDERLSVLPRKQARLLLPAGQTGRVAINGSKYLYAAETSGGDVVVLLRTTSSVRAENRPFWIAFAAAGGLGCVLAAVVAALLARNIARPVLRVVRASSRLAEGRDPGTPPLD
Ga0079221_103327421	3300006804	Agricultural Soil	MSSLQTRLGLAIGASVLAAVSVSLLVGAFFVRRSLEHNAFSGLERQARLLAQGDLHPGPGQLGRFLATQDERLSILPKRQARLLVPGGPSGRITVNGTEYLYATQPSGNDVVVLLRTARSVRAESRPFWVAL
Ga0075428_1011529492	3300006844	Populus Rhizosphere	MSLQTRLGLAIGAAVLAAVSVSLLAGAYLVRHSIEHAAINGLKRQVALLANDDLHPSAGPFGRFLATQDERLSVLPQRQARLLLPDSPSGHVTVNGRDYIYATRTNGGDTIVLLRTASSVRADSTPFWYALL
Ga0075424_1017641782	3300006904	Populus Rhizosphere	VSSLQGRLRLAIGAAVLAAVSLSLLVGAYLVRRSLEASAFDGLRRQVALLADEQVHPPAGSFGRFLATQEERLSVLPRKQAELLLPDRSTGRITINGRKYLYASKSSGGDVVVLLRTESSVRAENEPFWLALAAAGALGCVL
Ga0075424_1026438022	3300006904	Populus Rhizosphere	VSSLQTRLRLAIGASVLAAVSVSLLVGAFFVRRSLEQNAFSGLQRQVRLLAQGDLHPAPGQFGRFLATQDERLSILPKRQARLLVPGGPTGRITVNGHEYLYATQPSGPDVVVLLRTARSVRAESRPFWVALLIAGGLGSLLAVLVAAA
Ga0066710_1013494152	3300009012	Grasslands Soil	VNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEHVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDRPTGRIAINAHNYLYATKSSGSDVVVLLRTASSVRAENNPFWIALAAAGILGCILAAGVA
Ga0066710_1021278061	3300009012	Grasslands Soil	MSLQTRMGLAIGAAVLAAVSVSLLAGAYLVRRSVEHAGLNGLRRQVALLANEDLHPAAGPLGRFLATQDERLSVLPRRQARLLLPGGSAGRITVHGRDYLYATQTSGPDAVILLRTASSVSSDSRPFWFALAATGALGCLLA
Ga0111538_137508281	3300009156	Populus Rhizosphere	MVSLQARLRLAIGVSVLAAVALSLFVGAYLVRRSLEQSAFHGLERQIALLAHEDLHPTSGQIGRFLATQDERLSVLPQEQARLLLPPSPTGRITINGRKYLYATKTSGQDVVVL
Ga0075423_121727311	3300009162	Populus Rhizosphere	VNSLQARLRLAIGAAVLGAVSLSLLLGAYLVRRSLEQSAFNGLRRQVALLADEDVHPPAGSFGRFLATQDERLSILPTKQAQLLLPDRPTGRITINGRDHLYATRRTGGDVVVLLRTA
Ga0126307_109877411	3300009789	Serpentine Soil	VSSLQARLRLAIGVAVLASVALSLLVGAYLVRRSLEQSAFDGLRRQVALVAHEDLHPPHGAFGRFLATQDERLSVLPRKQARLLLPEPPTGRLTINGREYLCATKTAGGDVVLLLRTASSVRSESEPFWIALAAAGGLGCALAAVVGAL
Ga0126309_101909721	3300010039	Serpentine Soil	VSSLQARLRFAIGVAVLAAVSVSLLVGAYLVRRSLEQSAFYGLRRQVALLAHEDVHPPHGAFGRFLATQDERLSVLPRKQARLLLPDAPTGRLTINGREYLYATKTAGGDVVLLLRTASSVRAESRPFWIAL
Ga0134070_103678401	3300010301	Grasslands Soil	RGPGRSDIVISLQTRLRLSIGVAVLLAVSLSLLVGAYLVRRSLEHAAFNGLQRQVALLGHEDLHPAAGQFGRFLATQDERLSVLPKQQARLLLPESRTGRITIKGRDYLYATRESGSDVVVLLRTASSVRSESRPFWIALLAAGGLGCLLAVAVAAMLARSIARPVLRVARASSLLAKGDDPEPLP
Ga0134088_105324852	3300010304	Grasslands Soil	VNSLQSRLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPQKQARLLVPDRPTGRITINGRDYLYATKGSGNDVVVLLRTASSVRAESKPFWIAFGAAGILGCIL
Ga0134080_103478341	3300010333	Grasslands Soil	VNSLQSRLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLQRQVALLADEQVHPPAGSFGRFLATQDERLSVLPQKQARLLVPDRPTGRITINGRNYLYATKRSGTDVVVLLRTASSVRAESKPFWIAFAAAGILGCLLAAGVAAVLAR
Ga0126376_124572181	3300010359	Tropical Forest Soil	VTSLQGRLRLAIGVAVLAAVSLSLLVGAYLVRRSLEHAAFTGLRRQVALLAREDVHPPAGSFGRFLETQDERLSILAAKQARLLVPDASTGRITINGRRYLYATKPSGSDVVVLLRTASSVQAESEPFWIAFLAAGALGCLV
Ga0105239_117654481	3300010375	Corn Rhizosphere	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLEQSAFDGLQRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQAHLLLPDEVDGRITINDRKYFYATRSSGGETVVLLRTASSVRAESEPFWIAFVVAGALGCV
Ga0120159_11111321	3300012014	Permafrost	MSLQTRLRLAIGLAVLAAVSLSLLVGAYLVRRSLEQTAFSGLKRQVTLLAHEDLHPAPGQFGRFLATQDERLSILPRQQARLLLPDSPTGRITINRRDYLYATKDSGRDVVVLLRTASSVRAESRPFWMALAAAGAIGCLLAAGAAIALHQALVHREQMDAHLDKAQARLRELVERE
Ga0137382_101655853	3300012200	Vadose Zone Soil	LNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADENVHPPAGSFGRCLATQDERLSVLPRKQARLLVPDRPTGRITINGRKYLYATKSSGSEVVVLLR
Ga0137376_102471451	3300012208	Vadose Zone Soil	VNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADENVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDRPTGRLTINGRKYLYATKSSGSDVVVLLRTASSVRAESKPFWIAFAAAGILGCILAAGVAAGLARSISRPVLRVARASRRLAEGEDPEPL
Ga0150985_1210990612	3300012212	Avena Fatua Rhizosphere	VSSLQTRLRLAIGVAVLAAVSLSLLLGAYLVRRSLEGSAFNGLRRQVALLGHEDLHPPHGAFGRFLATQDERLTVLPRKQARLLLPDARTGRLNINGREYLYATKTAGGGGGGPSPPP
Ga0137371_114270942	3300012356	Vadose Zone Soil	VSVSLLAGAYLVRQSIEHAALNGLRRQVALLANEDLRPSPGPLGRFLTTQDERLSVLPRRQARLLLPDRPAGRITVNGRDYLYATRWTDAGAVVLLRTASSVRSDSRPFWFALAAAGALGCLL
Ga0134055_11991281	3300012401	Grasslands Soil	VISLQTRLRLSIGAAVLLAVSLSLLVGAYLVRRSLEHAAFSGLQRQVALLGHEDLHPAPGQFGRFLATQDERLSVLPKQQARLLLPESRTGRITIKGRDYLYATRESGSDVVVLLRTASSVRSESRPFWIALLAAGGLGCLLAVSVAAMLARSIARPVLRVARASRL
Ga0162652_1000729811	3300012941	Soil	VNSLQARLRLAIGAAVLGAISLSLLFGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRRYLYATKSGGSDVVVLLRTESSVRAESKPFWIAFAAAGILG
Ga0164301_116981902	3300012960	Soil	VSSLQARLRLAIGASVLAAVSVSLLVGAFFVRRSLEHNAFTGLQRQARLLAQGGLHPGPGQLGRFLATQDERLSILPRQQARLLVPGGPSGRITVNGTAYLYATQPSGRDVVVLLRTVRSVRAESR
Ga0164302_107842932	3300012961	Soil	MSLQTRLRLAIGSAVLAAVSLSLLVGGYLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQDERVSVLPQQQARLLLPDSRTGRITINERDYLYATEDSGRDVVVLL
Ga0164308_121130681	3300012985	Soil	VLAAVSVSLLAGAYLVRRSIEDNALTGLRRQVALLANENLHPAAGPLGRFLTTQDERLSVLPRRQAQLLLPDGTSGRLTVNGREYLYAREASGSDVVVLLRTASSVRADSRPFW
Ga0157375_131884731	3300013308	Miscanthus Rhizosphere	VTSLQTRLRLAIGSAVLVAVSLSLLVGAYLVRRSLEQTAFGGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDSPTGRITINEHDYLYATKDSGRDVVVLLRT
Ga0120158_104081011	3300013772	Permafrost	MSLQTRLGLAIGAAVLAAVSVSLLAGAYLVRRSVEHAGLNGLRRQVALLAKEDLHPSPGPLGRFLATQDERLSVLPRRQARLLLPGGSTGRITVHGRDYLYATQTSGPDAVILLRTASSVSSDSRPFWFALAATAALGCLLAAAVAALLARGI
Ga0132258_139133472	3300015371	Arabidopsis Rhizosphere	MSLQTRLGLAIGAAVLAAVSVSLLAGAYLVRHSIEHAAINGLRRQVALLANDDLHPSAGPFGRFLATQDERLSVLPQRQARLLLPDSPTGHVTVNGRDYIYATRTNGGDTIVLLRTSSSVRADSRPFW
Ga0132256_1004951541	3300015372	Arabidopsis Rhizosphere	VLAAVSVSLLAGAYLVRRSIEDNALTGLRRQVALLANENLHPAAGPLGRFLTTQDERLSVLPRRQAQLLLPDGASGRLTVNGREYLYAREASGSDVVVLLRTASSVRADSRPFWVALVAAGALGCLLAA
Ga0134069_11966411	3300017654	Grasslands Soil	VSSLQGRLRLAIGGSVLAAISLSLLLGAYLVRRSLEHNAFAGLRRQVVLLAHGDLHPPPGQFGRFLATQDERVSVLPRRQGRLLVPPRPAGRITINGRDYLYATATGGRDVVVLLRTAS
Ga0134083_103404161	3300017659	Grasslands Soil	VNSLQSRLRLAVGAAVLCAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADDQLHPPAGSFGRFLATQDERLSVLPQKQARLLVPDRPTGRITINGRDYLYATKRSGNDVVVLLRTASSVRAESKPFWIAFGAAGILGCLLAAGVAA
Ga0184608_100535821	3300018028	Groundwater Sediment	VNSLQARLRLAIGAAVLGAISLSLLFGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRSE
Ga0184621_100384773	3300018054	Groundwater Sediment	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENHPFWIALAAAGFLGCILAAGVAAVLARSIS
Ga0184618_104529962	3300018071	Groundwater Sediment	MSLQTRLRLAIGSAVLVAVSLSLLVGAFLVRRSLEQAAFSGLKRQVTLLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDRPAGRITINEHDYLYATKDSGPDV
Ga0184609_103978851	3300018076	Groundwater Sediment	MSLQTRLRLAIGSAVLVAVSLSLLVGAFLVRRSLEQAAFSGLKRQVTLLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDRPAARITINEHDYLYATEDSGRDVVVLLRTASSVRAESRPFWVALASAGA
Ga0066655_113962001	3300018431	Grasslands Soil	PGPRRPRGSGRLMSLQTRLGLAIGAAVIVAVSLSLLAGAYLVRRSIEHAALNGLRRQVPLLANEDLHPSPGPLGRFLATQDERLSVLPRRQARLLLPAGSAGRVTVNGRDYLYATRTSGADAITLLRTASSVSSDSRPFWFALAATGALGCLLAVGVAAALARGIAGPV
Ga0066669_101572354	3300018482	Grasslands Soil	VNSLQSRLWLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGPFGRFLATQDERLSVLPTKQARLLLPDRPTGRITINARSYLYATEPSGRDVVVLLRPA
Ga0184642_11012661	3300019279	Groundwater Sediment	MSLQTRLGLAIAAAVLAAVSVSLLAGAYLVHRSVEHAGLNGLRRQVALLANEDLHPSSGPLGRFLATQDERLSVLPRRQARLLLPDGSAGRITVHGRDYLYATQTSGPDAVILLRTASS
Ga0193729_10899902	3300019887	Soil	MSLQTRLRLAIGLAVLAAVSLSLLVGAYLVRRSLEQTAFSGLKRQVTLLAHEDLHPAPGQFGRFLATQDERLSILPQQQARLLLPDSPTGRITINRRHYLYATKDSGRDVVVLLRTASSVRAESRPFWMALA
Ga0193731_10883121	3300020001	Soil	VNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLANEHVHPPAGSFGRFLATQDERLSVLPRAQARLLVPDRPTGRITINGHKYLYASKSTDSDVVVLLRTASSVRAENHPFWIA
Ga0193745_10626712	3300020059	Soil	VNSLQARLRVAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLANEHVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDRPTGRITINGHNYLYATKSTDSDVVVLLRTASSVRADNHPFWIAL
Ga0210381_102288411	3300021078	Groundwater Sediment	VNSLQARLRLAIGAAVLGAISLSLLFGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIAFAAAGILGCILAA
Ga0207687_107817821	3300025927	Miscanthus Rhizosphere	MVSLQARLRLAIGVSVLAAVALSLFVGAYLVRRSLEQSAFHGLERQIALLAHEDLHPTSGQIGRFLATQDERLSVLPQEQARLLLPPGPTGRITINGRKYLYATKTTGQDVVVLLRTASSVRAESTPFWVAFIAAGALGSLLAIVVAAVLARSIARPLLRVARASRSLAEGRDPGPLPLAGPTDV
Ga0207665_114492291	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLEQSAFDGLRRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQARLLLPDKVDGRITIADRHGLGLTVNRDALRETLVPEL
Ga0209577_107965341	3300026552	Soil	VLAAVSVSLLAGAYLVRRSIEQAALNGLRRQVALLANEDLHPSSGPLGRFLMTQDERLSVLPRRQARLLLPDSPAGRITINGRDYLYAIRTSGADVVLLLRTASSVRSDSRPFWFAL
Ga0307313_102141881	3300028715	Soil	MSLQTRLRLAIGSAVLVAVSLSLLVGAFLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDSPSGRITINEHDYLYATEDSGRDVVVLLRTASSVRAESRPFWVALASAG
Ga0307307_100596082	3300028718	Soil	VSLSLLVGAYLVRRSLEQSAFSGLKRQVTLLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDSPTGRITINERDYLYATKQSGRDVVVLLRTASSVRAESRPFWMALAAAGAIGCLLAAAVAATL
Ga0307301_100638461	3300028719	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIAFAAAGILGCILAAGVAAVLARSISRPVLRVARASSRLAN
Ga0307301_102450501	3300028719	Soil	MSLQTRLRLAIGSAVLVAVSLSLLVGAFLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDSPSGRITINEHDYLYATEDSGRDVVVLLRTASSVRAESRPFWVALASAGAIGCLLAAVVAAMLARSIARPVLRVAR
Ga0307316_100129356	3300028755	Soil	MSLQTRLGLAIAAAVLAAVSVSLLAGAYLVHRSVENAGLNGLRRQVALLANEDLHPSSGPLGRFLATQDERLSVLPRRQARLLLPDGSAGRITVHGRDYLYATQTSGPDAV
Ga0307280_103218181	3300028768	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLR
Ga0307288_100867592	3300028778	Soil	MSLQTRLRLAIGSAVLVAVSLSLLVGAFLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPESPTGRITINERGYLYATKDSGRDVVVLLRTASSVRAESRPFWVALVAAGGIGCLLAAAVAAMLARSIARPVLR
Ga0307323_100584953	3300028787	Soil	VNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLANEHVHPPAGSFGRFLATQDERLSVLPRAQARLLVPDRPTGRITINGHNYLYASKSTDSEVVV
Ga0307323_103806391	3300028787	Soil	VISLRTRLRLAIGASVLAGVSVSSLVGAYLVRRSLEQNAFSGLQRQVGLLAQQDVHPAPGQLGRFLATQDERLSVLPKQQARLLLPDKPTGSITINGHDYLYATKASGNDIVVLLR
Ga0307290_100620551	3300028791	Soil	VNSLQARLRLAIGAAVLGAVSLSLLVGAYLVRRSLEQSAFDGLRRQVALLANEHVHPPAGSFGRFLATQDERLSVLPRAQARLLVPDRPTGRITINGHNYLYASKSTDSEVVVLLRTASSVRAENHPFWIALAAAGFLGCILAAGVAAVL
Ga0307299_103940531	3300028793	Soil	MSLQTRLRLAIGSAVLAAVSLSLLVGGYLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDSPTGRITINERDYLYATRESGRDIVVLLRTASSVRAESRPFWMALAAAGAIGCLLAAAV
Ga0307287_101298531	3300028796	Soil	MSLQTRLGLAIAAAVLAAVSVSLLAGAYLVHRSVEHAGLNGLRRQVALLANEDLHPSSGPLGRFLATQDERLSVLPRRQARLLLPDGSAGRITVHGRDYLYATHTSGPDAVILLRTVSSVSSDSRPFWFALAAAGALG
Ga0307284_100212531	3300028799	Soil	MSLQTRLGLAIAAAVLAAVSVSLLAGAYLVHRSVENAGLNGLRRQVALLANEDLHPSSGPLGRFLATQDERLSVLPRRQARLLLPDGSAGRITVHGRDYLYATHTSGPDAVILLRTASSVSSDSRPFWFALAAAGALGCLLAAAVA
Ga0307305_100685001	3300028807	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIAFAAAGILGCILAAGVAAVLARSISR
Ga0307305_102314531	3300028807	Soil	MSLQTRLRLAIGLAVLVAVSLSLLVGAFLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQEERLSVLPQQQARLLLPDSPSGRITINEHDYLYATEDSGRDVV
Ga0307305_104064291	3300028807	Soil	MSLQARLRLAIGSAVLAAVSLSLLVGGYLVRRSLEQTAFSGLKRQVALLAHEDLHPAPGQFGRFLATQDERLSVLPQQQARLLLPDSPTGRITINERDYLYATKDSGRDVVILLRTASS
Ga0307292_101642832	3300028811	Soil	VISLRTRLRLAIGASVLAGVSVSSLVGAYLVRRSLEQNAFSGLQRQVGLLAQQDVHPAPGQLGRFLATQDERLSVLPKQQARLLLPDKPTGSITINGHDYLYATRASGNDIVVLLRTASSVRAESRPFWVALATAGGIGC
Ga0307302_104166341	3300028814	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIA
Ga0307310_100673131	3300028824	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIAFAAAGILGCILAAGVAAVLARSISRPVLRVARASSRLA
Ga0307312_106893932	3300028828	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRSENNP
Ga0307277_101892012	3300028881	Soil	VNSLQARLRLAIGAAVLGAISLSLLFGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSDVVVLLRTASSVRAENNPFWIAFAAAGILGCILAAGVAAVLARSIS
Ga0307277_102348391	3300028881	Soil	VNSLQARLRLAIGAAVLGAISLSLLLGAYLVRRSLEQSAFDGLRRQVALLADEQVHPPAGSFGRFLATQDERLSVLPRKQARLLVPDHRTGRITINGRKYLYATKSSGSD
Ga0268241_101042332	3300030511	Soil	VSSLQGRLRLAIGAAVLGAVSLSLLVGAYLVGRSLEHGAVNGLRRQVALLADEQAHPPAGSFGRFLATQDERLSVLPRKQAQLLLPEGTTGRIRINGREYLYATRRSGGDVVVLLRTASSVRAESRPFWLAFTVAGALGCLIAAILAALLARGIARP
Ga0310813_108382461	3300031716	Soil	VSSLQGRLRLAIGAAVLAAVSLSLLVGAYLVRRSLEESAFDGLRRQVALLADEQVHPPAGSFGRFLATQEERLSVLPRKQAELLLPDRSTGRIAINGRKYLYASKSSGSDVVVLLRTESSIRAENEPFWLAFAAAGALGCILAAALAALLA
Ga0307470_112113102	3300032174	Hardwood Forest Soil	MRSLQGRLRLAIGAAVLGAVSLSLLAGAYLVRRSLEQSAFDGLRRQVALLADENVRPAAGTFGRFLATQDERLSVLPNKQARLLLPDKVDGRITINDRKYLYATRSSGGET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081192

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences