NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F081191

Metagenome / Metatranscriptome Family F081191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081191
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 79 residues
Representative Sequence VTQRRKKLPPPEEVVAAIVALADDGFCRRGELAQRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNLHRSG
Number of Associated Samples 87
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 44.74 %
% of genes near scaffold ends (potentially truncated) 5.26 %
% of genes from short scaffolds (< 2000 bps) 37.72 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.930 % of family members)
Environment Ontology (ENVO) Unclassified
(35.965 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.632 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.36%    β-sheet: 11.82%    Coil/Unstructured: 51.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.4.5.0: 'Winged helix' DNA-binding domaind4hqma_4hqm0.84
a.4.5.0: 'Winged helix' DNA-binding domaind4hqma_4hqm0.84
a.4.5.0: 'Winged helix' DNA-binding domaind3bpva_3bpv0.79
a.4.5.0: 'Winged helix' DNA-binding domaind4g9ya_4g9y0.79
a.4.5.0: 'Winged helix' DNA-binding domaind3bpva_3bpv0.79
a.4.5.0: 'Winged helix' DNA-binding domaind4g9ya_4g9y0.79
a.4.5.28: 'Winged helix' DNA-binding domaind1z91a11z910.78
a.4.5.28: 'Winged helix' DNA-binding domaind2fbia12fbi0.78
a.4.5.28: 'Winged helix' DNA-binding domaind1z91a11z910.78
a.4.5.28: 'Winged helix' DNA-binding domaind2fbia12fbi0.78

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF07098DUF1360 19.30
PF13466STAS_2 15.79
PF00106adh_short 7.02
PF00067p450 3.51
PF00440TetR_N 2.63
PF09107SelB-wing_3 2.63
PF00210Ferritin 2.63
PF13469Sulfotransfer_3 2.63
PF01370Epimerase 2.63
PF13649Methyltransf_25 1.75
PF12850Metallophos_2 1.75
PF12840HTH_20 1.75
PF14417MEDS 1.75
PF01028Topoisom_I 0.88
PF13823ADH_N_assoc 0.88
PF00574CLP_protease 0.88
PF12836HHH_3 0.88
PF05067Mn_catalase 0.88
PF00484Pro_CA 0.88
PF03717PBP_dimer 0.88
PF03841SelA 0.88
PF08240ADH_N 0.88
PF00723Glyco_hydro_15 0.88
PF01425Amidase 0.88
PF06463Mob_synth_C 0.88
PF00459Inositol_P 0.88
PF00296Bac_luciferase 0.88
PF13185GAF_2 0.88
PF13668Ferritin_2 0.88
PF04794YdjC 0.88
PF05974DUF892 0.88
PF01850PIN 0.88
PF02661Fic 0.88
PF00115COX1 0.88
PF02583Trns_repr_metal 0.88
PF13545HTH_Crp_2 0.88
PF02885Glycos_trans_3N 0.88
PF10057MpsC 0.88
PF02567PhzC-PhzF 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG2124Cytochrome P450Defense mechanisms [V] 3.51
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.75
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.75
COG1937DNA-binding transcriptional regulator, FrmR familyTranscription [K] 0.88
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 0.88
COG3569DNA topoisomerase IBReplication, recombination and repair [L] 0.88
COG3546Mn-containing catalase (includes spore coat protein CotJC)Inorganic ion transport and metabolism [P] 0.88
COG3394Chitooligosaccharide deacetylase ChbG, YdjC/CelG familyCarbohydrate transport and metabolism [G] 0.88
COG3387Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 familyCarbohydrate transport and metabolism [G] 0.88
COG2896GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)Coenzyme transport and metabolism [H] 0.88
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.88
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.88
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.88
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.88
COG0768Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)Cell cycle control, cell division, chromosome partitioning [D] 0.88
COG0384Predicted epimerase YddE/YHI9, PhzF superfamilyGeneral function prediction only [R] 0.88
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459017|G14TP7Y01DXRZWAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300000956|JGI10216J12902_109807303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium655Open in IMG/M
3300002568|C688J35102_119043517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium630Open in IMG/M
3300002568|C688J35102_119619466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium733Open in IMG/M
3300002568|C688J35102_120125830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium890Open in IMG/M
3300002568|C688J35102_120235810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium941Open in IMG/M
3300002568|C688J35102_120378648All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300002568|C688J35102_120810497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1652Open in IMG/M
3300002568|C688J35102_120944240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2737Open in IMG/M
3300004081|Ga0063454_100400076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria918Open in IMG/M
3300004114|Ga0062593_101381620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium751Open in IMG/M
3300005329|Ga0070683_100000855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria22514Open in IMG/M
3300005329|Ga0070683_100091469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2857Open in IMG/M
3300005331|Ga0070670_100053459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3468Open in IMG/M
3300005344|Ga0070661_100000004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia243876Open in IMG/M
3300005345|Ga0070692_10057080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2046Open in IMG/M
3300005354|Ga0070675_100000078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales56469Open in IMG/M
3300005365|Ga0070688_100000113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales42091Open in IMG/M
3300005365|Ga0070688_100002872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales8785Open in IMG/M
3300005454|Ga0066687_10217538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1051Open in IMG/M
3300005539|Ga0068853_100371800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1333Open in IMG/M
3300005577|Ga0068857_100812858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria893Open in IMG/M
3300005614|Ga0068856_100000366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria49541Open in IMG/M
3300005614|Ga0068856_100013015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8056Open in IMG/M
3300005616|Ga0068852_100000022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria125196Open in IMG/M
3300006755|Ga0079222_10328256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1018Open in IMG/M
3300006794|Ga0066658_10000294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria18251Open in IMG/M
3300006881|Ga0068865_100000061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales57211Open in IMG/M
3300006954|Ga0079219_10709177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium767Open in IMG/M
3300009098|Ga0105245_10000023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria180844Open in IMG/M
3300009148|Ga0105243_10006741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8861Open in IMG/M
3300009177|Ga0105248_10000245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria62951Open in IMG/M
3300009840|Ga0126313_10000166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria28660Open in IMG/M
3300009840|Ga0126313_10016873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4775Open in IMG/M
3300009840|Ga0126313_10060713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2695Open in IMG/M
3300009840|Ga0126313_11575394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300009840|Ga0126313_11597659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300010036|Ga0126305_10000006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria97686Open in IMG/M
3300010036|Ga0126305_10011059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4533Open in IMG/M
3300010041|Ga0126312_10021856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4274Open in IMG/M
3300010041|Ga0126312_10396116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium982Open in IMG/M
3300010044|Ga0126310_11141474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300010166|Ga0126306_10204366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1493Open in IMG/M
3300010375|Ga0105239_10020042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7379Open in IMG/M
3300012893|Ga0157284_10000060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria15502Open in IMG/M
3300012907|Ga0157283_10001660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3162Open in IMG/M
3300012911|Ga0157301_10420638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300013102|Ga0157371_10001441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria24694Open in IMG/M
3300013104|Ga0157370_10045071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4234Open in IMG/M
3300013104|Ga0157370_10096668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2771Open in IMG/M
3300013105|Ga0157369_10000014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales266411Open in IMG/M
3300013297|Ga0157378_10012236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7514Open in IMG/M
3300013308|Ga0157375_11899195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium707Open in IMG/M
3300014487|Ga0182000_10039911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1357Open in IMG/M
3300018073|Ga0184624_10000046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria30182Open in IMG/M
3300018432|Ga0190275_10000114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria94870Open in IMG/M
3300018465|Ga0190269_10000005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria90504Open in IMG/M
3300018920|Ga0190273_10000010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria174522Open in IMG/M
3300018920|Ga0190273_10000874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10925Open in IMG/M
3300018920|Ga0190273_11710401All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300019767|Ga0190267_10001900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5088Open in IMG/M
3300020070|Ga0206356_11785348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2018Open in IMG/M
3300020154|Ga0196965_1089533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300020181|Ga0196958_10005564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3576Open in IMG/M
3300020181|Ga0196958_10352930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium552Open in IMG/M
3300020181|Ga0196958_10430679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300022883|Ga0247786_1001998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3823Open in IMG/M
3300022883|Ga0247786_1106627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300022910|Ga0247768_1000046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria57934Open in IMG/M
3300023097|Ga0247757_10175041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium694Open in IMG/M
3300023268|Ga0247765_1006281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei3219Open in IMG/M
3300024055|Ga0247794_10003191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3377Open in IMG/M
3300024187|Ga0247672_1050007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium693Open in IMG/M
3300024426|Ga0196960_10000169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria26157Open in IMG/M
3300024426|Ga0196960_10062941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1056Open in IMG/M
3300025920|Ga0207649_10000003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia388908Open in IMG/M
3300025920|Ga0207649_10696134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria788Open in IMG/M
3300025925|Ga0207650_10052086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3031Open in IMG/M
3300025926|Ga0207659_10000018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria156920Open in IMG/M
3300025927|Ga0207687_10000015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia261701Open in IMG/M
3300025935|Ga0207709_10002766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10809Open in IMG/M
3300025938|Ga0207704_10000026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria123892Open in IMG/M
3300025941|Ga0207711_10000192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria65599Open in IMG/M
3300025944|Ga0207661_10000805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria20473Open in IMG/M
3300026041|Ga0207639_10355294All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300026078|Ga0207702_10000085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria106728Open in IMG/M
3300026078|Ga0207702_10004785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11930Open in IMG/M
3300026322|Ga0209687_1197369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300026325|Ga0209152_10000037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales67051Open in IMG/M
3300027787|Ga0209074_10142075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium855Open in IMG/M
3300028704|Ga0307321_1002309All Organisms → cellular organisms → Bacteria3217Open in IMG/M
3300028707|Ga0307291_1059727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium925Open in IMG/M
3300028712|Ga0307285_10000004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria246966Open in IMG/M
3300028721|Ga0307315_10010709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2270Open in IMG/M
3300028721|Ga0307315_10284041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300028722|Ga0307319_10000001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia552716Open in IMG/M
3300028754|Ga0307297_10003578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3788Open in IMG/M
3300028755|Ga0307316_10002627All Organisms → cellular organisms → Bacteria5635Open in IMG/M
3300028778|Ga0307288_10000002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria349991Open in IMG/M
3300028778|Ga0307288_10000030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria68691Open in IMG/M
3300028782|Ga0307306_10000004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria59016Open in IMG/M
3300028790|Ga0307283_10184084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300028796|Ga0307287_10109666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1043Open in IMG/M
3300028802|Ga0307503_10000011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria245710Open in IMG/M
3300028872|Ga0307314_10000002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria108486Open in IMG/M
3300030510|Ga0268243_1027989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1148Open in IMG/M
3300030510|Ga0268243_1031419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1094Open in IMG/M
3300031731|Ga0307405_10955827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium728Open in IMG/M
3300031938|Ga0308175_100002182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria13351Open in IMG/M
3300032080|Ga0326721_10000042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria117350Open in IMG/M
3300034000|Ga0334918_000625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10126Open in IMG/M
3300034132|Ga0334915_000102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria33288Open in IMG/M
3300034173|Ga0334925_026243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1287Open in IMG/M
3300034687|Ga0334905_000038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria19061Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.93%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil9.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil7.02%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.02%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.39%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.51%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.63%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust2.63%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.63%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.88%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.88%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020154Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20EnvironmentalOpen in IMG/M
3300020181Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300022910Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6EnvironmentalOpen in IMG/M
3300023097Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4EnvironmentalOpen in IMG/M
3300023268Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300024187Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13EnvironmentalOpen in IMG/M
3300024426Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300034000Biocrust microbial communities from Mojave Desert, California, United States - 14HMCEnvironmentalOpen in IMG/M
3300034132Biocrust microbial communities from Mojave Desert, California, United States - 11HMCEnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034687Soil microbial communities from Mojave Desert, California, United States - 1NOCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4ZMR_045607002170459017Switchgrass, Maize And Mischanthus LitterVTQRRRKLPRPRRSSLPIVALADDGFCRRGELAQRLPGLGERDLRLAVRRAVALGLVIERRGPDGASKWR
JGI10216J12902_10980730323300000956SoilVSARPKLPPPEAIVEAIVELADDGFCRRGELAQRFPRLGARDLRRALRRAVAQGLVIERRGPDGSFHLAVSSEGWNLHRNG*
C688J35102_11904351713300002568SoilVPRRRKLPPPEEVVAAIVALADDGYTRRAELARRFPGLGERDLRRAVRRAVAMGLVIERRGPDGAFHVALSSEGWNLRRRG*
C688J35102_11961946623300002568SoilVTQHRKKLPPAEEVVAAIVALADDGFCRRGELRQRFPALGERDLRRAVRRAVTRGLVIERRAPDGAFHLAVSSEGWNLHRNG*
C688J35102_12012583033300002568SoilMTQRRRKLPAPEEVVAAIVEIADDGYCRRGELAQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWDRHRNG*
C688J35102_12023581013300002568SoilMTQRRRKLPAPEEVVAAIVEIADDGYCRRGELAQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHLAVSSEGWNRHRSG*
C688J35102_12037864833300002568SoilVAAIVALADDGFCRRSELARSFPRLQSRDLRRALRRAVSQGLVIERRSPDGAFHLAVSSEGWNRHRNG*
C688J35102_12081049723300002568SoilVTQRRRKLPPPEDIVAAIVAIADDGFCRRGELVRRFPRLGERDLRRAVRRAVSQGLVLERRGPDGAWHVAVSSEGWNRHRSG*
C688J35102_12094424033300002568SoilVVAAIVELADDGYVRRRELGQLFPRLGERDLRRAVRRAVAIGLVIERRGPDGAFHVAVSSEGWNRRRKG*
Ga0063454_10040007623300004081SoilLAQPRSSLPPPEDVVAAIVELADDGYVRRRELGQLFPRLGERDLRRAVRRAVAIGLVIERRGPDGAFHVAVSSEGWNRRRKG*
Ga0062593_10138162023300004114SoilMPPRRKLPPPEEIVAAIIDLADDGFCRRGELVQRFPRLGERDLRRAVRRAVAQGLVIERRGPDGAFHVAVSSEGWNLRRAG*
Ga0070683_100000855233300005329Corn RhizosphereVGAIVALADDGFCRRSDLAQSFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG*
Ga0070683_10009146913300005329Corn RhizosphereVSPRRALPRPEQIVTAIVACADDGFCRRTELAQRFPGLGARDLRRALRRAIAQGLVIERRGPDGGFHLAVSSEGWNMHRSG*
Ga0070670_10005345943300005331Switchgrass RhizosphereVTQRRRKLPAPEEVVAAIVALADDGYCRRGELARRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNLRRSG*
Ga0070661_100000004823300005344Corn RhizosphereMSPPRRLPSPEVLVAAIVELADDGFCRRSELALKFPGLGARDLRRALRRAIAQGFVIERRGPDGLFHLAVSSEGWDLHRSG*
Ga0070692_1005708023300005345Corn, Switchgrass And Miscanthus RhizosphereVPPRRKLPPPEEIVAAIVDLADDGFCRRGELVRRFPRLGERDLRRAVRRAVALGLVIERRGTDGAFHVAVSSEGWNLHRSG*
Ga0070675_100000078463300005354Miscanthus RhizosphereVSPRKPLPSPEEIVAAIVALADDGFCRRAELAQRFPRLESRDLRRALRRAVVQGLVIERRGPDGAFHLAVSSEGWNRLRSG*
Ga0070688_100000113293300005365Switchgrass RhizosphereVSPSRPLPTPERLVAAIVEIADDGFCRRSELAQKFPGLGARELRRGLRRAVAQGFVIERRGPDGGFHLAVSSEGWDLHRSG*
Ga0070688_10000287233300005365Switchgrass RhizosphereMTQRLGKLPPPEEVVAAIVALADDGFCRRGELRQRFPRLGERELRRALRRAAAQGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0066687_1021753823300005454SoilMSRRSALPTPEQIVAAIVDLADDGFCRRGELAQRFPKIGSRDMRRALRRAIAQGLVIERRGPDGGFHLALSSEGWNLHRSG*
Ga0068853_10037180013300005539Corn RhizosphereVAAIVAVADDGYCRRGELTQRFPRLGERDLRRAVRRAATLGLVLERRGPDGAWHVAVSSEGWNLHRNG*
Ga0068857_10081285833300005577Corn RhizosphereVTQRRKKLPPPEEVVAAIVALADDGFCRRGELAQRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0068856_100000366533300005614Corn RhizosphereVTQQRRKLPSPEDVVAAIVALADDGYCRRIELARRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWDRHRSG*
Ga0068856_10001301563300005614Corn RhizosphereVAAIVALADDGYCRRGELARRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNRHRSG*
Ga0068852_100000022773300005616Corn RhizosphereVTQRKIRLPVPEEVVAAIVELADDGFCRRGELVQRFPRLGERDLRRAVRRAVSQGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0079222_1032825623300006755Agricultural SoilMVSPRKPLPSPEEIVAAIVALADDGYCRRSELEQRFPRLESRDRRRAVRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRSG*
Ga0066658_10000294143300006794SoilVSPRRALPTPEQIVAAIVALADDGFCRRSELAQRFPGLGARDLRRALRRAVAQGLVIERRGPDGGFHLAVSSEGWDLHRSG*
Ga0068865_100000061253300006881Miscanthus RhizosphereVAAIVDLADGGYCRRGELRQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0079219_1070917713300006954Agricultural SoilVSARRALLPPEQIVAAIVDLADDGFARRSELALRFPRVGARDLGRALRRAIALGLVIERRGPDGAFHVAVSSEGWNLHRSG*
Ga0105245_10000023633300009098Miscanthus RhizosphereVTQRRKKLPPPEEIVAAIVALADDGFCRRGELVRRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0105243_1000674173300009148Miscanthus RhizosphereVPRRRALPAPEQIVAAIVELADDGFCRRAELEQRFPGLGARDLRRALRRAVAQGLVIERRGPDGGFHLAVSSEGWEMHRNG*
Ga0105248_10000245243300009177Switchgrass RhizosphereMPEAIVAAIVELADDGYCRRGALSQRFPRIGERDLRRAVRRAVSQGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0126313_10000166223300009840Serpentine SoilVATIVELADDGFCRRAELAQRYPGLGARDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWDRHRSG*
Ga0126313_1001687373300009840Serpentine SoilVTQHRRKLPAPEEVVAAIVALADDGYCRRGELAQRFPRLGERDLRRAVRRAVGQGLVLERRGPDGTWHVALSSEGWNLHRSG*
Ga0126313_1006071323300009840Serpentine SoilVLLPRRHRRDPSVEGNVTQRRRKLPAPEEVVAAIVALADDGFCRRGELARRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWYVALSSEGWNRHRSG*
Ga0126313_1157539423300009840Serpentine SoilMLAALSPRRTLPSPEQIVGAIVELADDGFCRRSELAQRFTGTGAEDLRRALRRAVAQGLVIERRGPDGGFHLALSSEGWNMHRSG*
Ga0126313_1159765913300009840Serpentine SoilLSPRRTLPTPEQIVAAIVELADDGFCHRTELAQRFSGLGARDLRRALRRAISQGMVIERRGPDGGFHLAVSSEGWNLHRSG
Ga0126305_10000006433300010036Serpentine SoilVSPRRTLPTPEQIVAAIVELADDGFCRRADLAQRFPRLGARDLRRALRRAVAQGLVIERRGPDGGFHLAVSSEGWDLHRSG*
Ga0126305_1001105933300010036Serpentine SoilLPEEIVATIVELADDGFCRRAELAMRFPKLGARDLQRALRRAVAQGLVIERRGPDGSFHLAVSSEGWNLHRSG*
Ga0126312_1002185663300010041Serpentine SoilMTQRRTKLPPPEAIVTAIVDLADDGYCRRGELAQRFPRLGERDLRRAVRRAVTLGLVLERRGPDGAWHVAVSSEGWNLHRTG*
Ga0126312_1039611613300010041Serpentine SoilVPPRRKLPPPEEIVAAIIDLADDGFCRRAELARHFRGLGERDLRRAVRRAVAQGLVIERRGPDGAFHVAVSSEGWNRRRN
Ga0126310_1114147413300010044Serpentine SoilMLAAVSPRKPLPPPEEIVGAIVALADDGFCRRSELERSFPRLGSRERRRAVRRAVVQGLVIERRGPDGSFHVAVSSEGWNRHRSG*
Ga0126306_1020436633300010166Serpentine SoilVSPRRTLPTPEQIVAAIVELADDGFCRRADLAQRFPGLGARDLRRALRRAVAQGLVIERRGPDGGFHLAVSSEGWDLHRSG*
Ga0105239_1002004253300010375Corn RhizosphereVPQPPSTGRDPNVENKVTQRRRKLPPPEEVVAAIVALADDGFCRRGELAQRFPGLGQRGLRRAVRRAVALGLVIERRGPDGAFHLVVSSEGWNLHRAG*
Ga0157284_1000006053300012893SoilVSRRRQIPVPEEVVAAIVALADDGFCRRSELARSFPRLESRDLRRALRRAVSQGLVIERRGPDGAFHLAVSSEGWNRHRNG*
Ga0157283_1000166023300012907SoilVSPRRKLPPPEEVVAAIVELADDGFCRRGELARRFPDLGERDLRRALRRAVVLGLVIERRGPDGARHLAVSSEGWNLHRNG*
Ga0157301_1042063813300012911SoilVAAIVDLADDGFCRRGELARRFPRLGERDLRRAVRRAVAQGLVIERRGPDGAFHVAVSSEGWNLRRSG*
Ga0157371_10001441173300013102Corn RhizosphereMTQRRAKLPPPEDVVAAIVALADDGYCRRGELRQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0157370_1004507173300013104Corn RhizosphereVTQRRRKLPAPEDVVSAIVELADDGFCRRGELAQRFPGLGERDLRRAVRRAVALGLVLERRGPDGAWHVALSSEGWNLHRSG*
Ga0157370_1009666813300013104Corn RhizosphereVPTRRKLPPPEEIVAAIVALADDGFCRRSELLQRFPRLGGRDLRRAVRRAVALGLVIERRGPDGAFHVAVSSEGWNLHRSG*
Ga0157369_100000142573300013105Corn RhizosphereMTQRLGKLPPPEEVVAAIVALADDGFCRRGELRQRFPRLGERELRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0157378_1001223643300013297Miscanthus RhizosphereVSPRKPLPPPVEIVAAIIALADDGFCRRSELAQSFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG*
Ga0157375_1189919523300013308Miscanthus RhizosphereVTQRRKKLPAPEEVVAAIVALADDGYCRRSELAQRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNLHRSG*
Ga0182000_1003991123300014487SoilVSRRRALPPPEQIVSSIVELADDGFCRRAELAQRFPGLGARDLRRALRRAVAQGLVIERRGPDGSFHLAVSSEGWNLHRSG*
Ga0184624_10000046293300018073Groundwater SedimentVSPRRALPSPEQIVAAIVALADDGFCRRSELAQRFPGLGARDLRRALRRAVAQGLVIERRGPDGGFHLVVSSEGWDMHRSG
Ga0190275_10000114473300018432SoilVEAIVALADDGFCRRGELVRRFPKLGARDLHRTLRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0190269_10000005473300018465SoilVAAIVDLADDGFCRRSELARKFPRLEARDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0190273_100000101123300018920SoilMTQRRQKLPQPEEVVAAIVELADDGFCRRAELVQRFPRLGERDLRRALRRAVGLGLVIERRGPDGAFHVAVSSEGWNLLRNG
Ga0190273_10000874113300018920SoilVAAIVALADDGYCRRGELAQRFPRLGERDLRRAVRRAVSLGLVLERRGPDGAWHVALSSEGWNLHRSG
Ga0190273_1171040123300018920SoilVSPRRALPSPEQIVAAIVELADDGFCRRSELAQRFPGTGAQDLRRALRRAIAQGLVIERRGPDGGFHLAVSSEGWNLHRSG
Ga0190267_1000190013300019767SoilVPRRRKLLPPEEVVAAIVDLADDGFCRRAELARRFRGLGERDVGRAVRRAVAQGLVIERRGPDGAFHVAVSSEGWNRRRNG
Ga0206356_1178534843300020070Corn, Switchgrass And Miscanthus RhizosphereMPPRRKLPPPEEVVAAIVAIADDGFCRRGELGQRFPGLGERDLRRALRRAIAQGLVLERRGPDGGFHLAVTSEGWNRRRAG
Ga0196965_108953323300020154SoilMSRRRKLPPPEEIVAAIVELADDGFCRRGELAQRFPRLGARDLHRALRRTVAQGLVIERRGPDGAFHLAVSSEGWNLHRSG
Ga0196958_1000556433300020181SoilVSRRAKLPPPEEMVAAIVELADDGFCRRGELAQRFPRLGGRDLHRALRRAVAQGLVIERRGPDGSFHLAVSSEGWNLHRSG
Ga0196958_1035293023300020181SoilMLAPVPSRRKLPPPEEIVAAIVELADDGFCRRGELAQRFPRLGPRDLGRVLRRAIAQGLVIERRGPDGGFHLAVSSEGWNLHRSG
Ga0196958_1043067913300020181SoilVSRRSKLPPPEEIVAAIVDLADDGFCRRGELAQRFPRLGARDLRRALRRAIAQGLVIERRGPDGGFHFAVSSEGWNRHRSG
Ga0247786_100199833300022883SoilVSPRKPLPPPDEIVAAIVSLADDGFCRRSDLARNFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0247786_110662713300022883SoilADDGYCRRGELRQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNQHRN
Ga0247768_1000046483300022910Plant LitterVTQRKIRLPVPEEVVAAIVELADDGFCRRGELVQRFPRLGERDLRRAVRRAVSQGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0247757_1017504123300023097Plant LitterVSPRKPLPPPEEIVAAIVELADDGFCRRGDLARSFPRLESRELRRALRRAVAQGLVIERRGTDGGFHLAVSSEGWNRHRIG
Ga0247765_100628143300023268Plant LitterMTQRLRKLPPPEEIVAAIVALADDGFCRRSELLQRFPRLGERDLRRAVRRAVALGLVIERRGPDGAFHVAVSSEGWNLHRSG
Ga0247794_1000319143300024055SoilMTQRRAKLPPPEDVVAAIVTIVDDGYCRRGELRQRFPRLGERDLRQAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLRRSG
Ga0247672_105000713300024187SoilVTQRRKKLPPPEEIVAAIVALADDGFCRRGELRQRFPRLGERDLRRAVRRAVVLGLVLERRGPDGAWHVAVSSEGWNRHRSG
Ga0196960_10000169223300024426SoilVSRRSPLPPPEEIVAAIVELADDGFCRRGELAQRFPRLGSRDMRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNLHRSG
Ga0196960_1006294123300024426SoilVPRRRQLPTPEEIVAAIVALADDGFCRRGELAQRFPRLGARDLRRALRRAVAQGFVIERRGPDGGFHLAVSSEGWNLHRSG
Ga0207649_100000031773300025920Corn RhizosphereMSPPRRLPSPEVLVAAIVELADDGFCRRSELALKFPGLGARDLRRALRRAIAQGFVIERRGPDGLFHLAVSSEGWDLHRSG
Ga0207649_1069613423300025920Corn RhizosphereVSPRRALPRPEQIVTAIVACADDGFCRRTELAQRFPGLGARDLRRALRRAIAQGLVIERRGPDGGFHLAVSSEGWNMHRSG
Ga0207650_1005208633300025925Switchgrass RhizosphereVTQRRRKLPAPEEVVAAIVALADDGYCRRGELARRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNLRRSG
Ga0207659_10000018923300025926Miscanthus RhizosphereVSPRKPLPSPEEIVAAIVALADDGFCRRAELAQRFPRLESRDLRRALRRAVVQGLVIERRGPDGAFHLAVSSEGWNRLRSG
Ga0207687_100000151193300025927Miscanthus RhizosphereVTQRRKKLPPPEEIVAAIVALADDGFCRRGELVRRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0207709_1000276693300025935Miscanthus RhizosphereVPRRRALPAPEQIVAAIVELADDGFCRRAELEQRFPGLGARDLRRALRRAVAQGLVIERRGPDGGFHLAVSSEGWEMHRNG
Ga0207704_10000026223300025938Miscanthus RhizosphereVAAIVDLADGGYCRRGELRQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0207711_10000192243300025941Switchgrass RhizosphereMPEAIVAAIVELADDGYCRRGALSQRFPRIGERDLRRAVRRAVSQGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0207661_10000805233300025944Corn RhizosphereVSPRKPLPPPEEIVGAIVALADDGFCRRSDLAQSFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0207639_1035529413300026041Corn RhizosphereVPQRRKKLPPPEEVVAAIVAVADDGYCRRGELTQRFPRLGERDLRRAVRRAATLGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0207702_100000851183300026078Corn RhizosphereVTQQRRKLPSPEDVVAAIVALADDGYCRRIELARRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHVAVSSEGWDRHRSG
Ga0207702_10004785103300026078Corn RhizosphereVAAIVALADDGYCRRGELARRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNRHRSG
Ga0209687_119736913300026322SoilMSRRSALPTPEQIVAAIVDLADDGFCRRGELAQRFPKIGSRDMRRALRRAIVQGLVIERRGPDGGFHLALSSEGWNLHRSG
Ga0209152_10000037733300026325SoilVSPRRALPTPEQIVAAIVALADDGFCRRSELAQRFPGLGARDLRRALRRAVAQGLVIERRGPDGGFHLAVSSEGWDLHRSG
Ga0209074_1014207533300027787Agricultural SoilMVSPRKPLPSPEEIVAAIVALADDGYCRRSELEQRFPRLESRDRRRAVRRAVAQGLVIERRGPDGAFHLAVSSE
Ga0307321_100230943300028704SoilVAAIVSLADDGFCRRGELAQSFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0307291_105972723300028707SoilVTQRRRKLPAPEDVVAAIVALADDGYCRRGELTQRFPRLGERDLRRAVRWAVTLGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0307285_100000041833300028712SoilVTAIVALADDGFCRRSELARSFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0307315_1001070923300028721SoilVTQRRRKLPPPEDVVAAIVDLADDGFCRRGELARRFPGLGERDLRRAVRRAVSQGLVIERRGPDGAFHVAVSSEGWNRRRSG
Ga0307315_1028404123300028721SoilMTQRRRKLPPPEDVVAAIVALADDGFCRRSELAQRFPRLGERDLRRAVRRAVALGLVLERRGPDGAWHLAVSSEGWNRHRSG
Ga0307319_100000012943300028722SoilVSPRKPLPSPEEIVAAIVALADDGYCRRGELEQKFPRLESRDRRRAVRRAVAQGLVIERRGPDGAFHVAVSSEGWNRHRNG
Ga0307297_1000357833300028754SoilVTQRRKKLPAPEEIVAAIVAIADDGFCRRGELAQRFPRLGERDLRRAVRRAVTLGLVLERRGPDGAWHVAVTSEGWNLHRSG
Ga0307316_10002627103300028755SoilMTRRPQLPRPDEILAAIVEIADDGFCRRGDLAQRFPRLGERDLRRALRRAVARGFVLERRGPDGSFHFAVSSEGWNLRRGG
Ga0307288_100000022033300028778SoilVAAIVALADDGYCRRGELVQRFPRLGERDLRRAVRRAVAQGLVLERRGPDGAWHVAVSSEGWNLRRSG
Ga0307288_10000030413300028778SoilVSPPKPLPPPEQIVAAIVAHADDGFCRRSELERSFPRLGSRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0307306_10000004343300028782SoilVTQRRNKLPPPEEIVTAIVALADDGFCRRGELTQRFPRLGERDLRRAVRRAVSQGLVLERRGPDGAWHVAVSSEGWNLHRSG
Ga0307283_1018408423300028790SoilDPSDDDKVTQRRKKLPAPEEVVTAIVALADDGYCRRSELAQRFPRLGERDLRRAVRRAVAQGLVLERRGPEGAWHVTVSSEGWNRHRSG
Ga0307287_1010966613300028796SoilPRKPLPPPEEIVTAIVALADDGFCRRSELARSFPRLESRDLRRALRRAVAQGLVIERRGPDGAFHLAVSSEGWNRHRNG
Ga0307503_100000112533300028802SoilVSARRALPQPEQIVAAIVDLADDGFCRRGELAQRFPGIGARDLGRALRRAIALGLVIERRGPDGASHLALSSEGWNLRRSG
Ga0307314_10000002483300028872SoilVAAIVALADDGFCRRSELALSFPRLESRDLRRALRRAVAQGLVIERRGPDGGFHVAVSSEGWNRHRNG
Ga0268243_102798923300030510SoilVSRRRALPPPEQIVSSIVELADDGFCRRAELAQRFPGLGARDLRRALRRAVAQGLVIERRGPDGSFHLAVSSEGWNLHRSG
Ga0268243_103141923300030510SoilVSPRKPLPPPEEIVAAIVALADDGYCRRSELERSFPRLESRDLRRAVRRAVAQGLVIERRGPDGAFHVAVSSEGWNRHRSG
Ga0307405_1095582723300031731RhizosphereVSRRSILPPPEEIVAAIVDLADDGFCRRGELAQRFPKLGSRDLGRVLRRAIAQGFVIERRGPDGSFHLAVSSEGWNLHRNG
Ga0308175_10000218253300031938SoilMSPLRRLPPPEELVAAIVELADDGFCRRSELALRFPGLGARDLRRALRRAIAQGFVIERRGPDGLFHLAVSSEGWDLHRSG
Ga0326721_100000421013300032080SoilVSRRSKLPPPEEIVAAIVELADDGFCRRNELVQRFPKLGARDQRRALRRAIAQGLVIERRGPDGGFHLAVSSEGWNLHRSG
Ga0334918_000625_2049_22943300034000Hypolithic BiocrustMSPRKPLPSPEEIVATIVALADDGYCRRSDLEQRFPRLESRDRRRAVRRAVAQGLVIERRGPDGAFHLAVSSEGWNRYRSG
Ga0334915_000102_29726_299713300034132Hypolithic BiocrustVPRRRKLPPPEEIVAAIVDLADDGFCRRVELAMRFPKLESRDLRRALRRAIAQGLVIERRGPDGGFHLAVSSEGWNLHRSG
Ga0334925_026243_28_2733300034173Hypolithic BiocrustVPPRRKLPSPEEIVAAIVDLADDGFCRRGELAQRFRGLGERDVGRAVRRAVAQGLVIERRGPDGAFHLSVSSEGWNRHRAG
Ga0334905_000038_16686_169343300034687SoilVTQRRRKLPAPEEVVAAIVDLADDGYCRRGALAQRFPKLGERDLRRAVRRAVSLGLVLERRGPDGAWHVALSSEGWNLHRSG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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