Metagenome Family F081177

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081177
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	131 residues
Representative Sequence	MAQAAAKSAQPYRRHIVGLPLQRSLFREAARAATTVGLPGLSSEQDFPARLDENGDLFLDRSQVAALTKALLSWFTPETLERMHRTHAAACDALVDASENAARVAASLDGAARKLSEDLANRMALV
Number of Associated Samples	100
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.04 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	93.86 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.123 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (29.825 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.246 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.60% β-sheet: 5.84% Coil/Unstructured: 41.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00550	PP-binding	2.63
PF01663	Phosphodiest	0.88
PF13183	Fer4_8	0.88
PF04820	Trp_halogenase	0.88
PF02754	CCG	0.88
PF13517	FG-GAP_3	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.88
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	78.07 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	78.07 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	78.07 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	78.07 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002239\|JGI24034J26672_10113476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300005093\|Ga0062594_100760711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300005093\|Ga0062594_101594098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300005167\|Ga0066672_10066122	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300005290\|Ga0065712_10563082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300005330\|Ga0070690_100392576	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005332\|Ga0066388_103946083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300005332\|Ga0066388_107362339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300005333\|Ga0070677_10521400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300005445\|Ga0070708_101683678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300005450\|Ga0066682_10357121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	940	Open in IMG/M
3300005467\|Ga0070706_101382130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300005468\|Ga0070707_100913071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300005468\|Ga0070707_101707671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300005540\|Ga0066697_10229271	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005543\|Ga0070672_101135349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300005547\|Ga0070693_100245918	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300005558\|Ga0066698_10958124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005560\|Ga0066670_10544088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300005568\|Ga0066703_10326459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	925	Open in IMG/M
3300005569\|Ga0066705_10538411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300005587\|Ga0066654_10239926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300005598\|Ga0066706_10558418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300005764\|Ga0066903_100353576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2377	Open in IMG/M
3300005764\|Ga0066903_106964223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300005764\|Ga0066903_108830350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300005841\|Ga0068863_102111154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300005842\|Ga0068858_100732685	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005937\|Ga0081455_10046649	All Organisms → cellular organisms → Bacteria	3757	Open in IMG/M
3300005983\|Ga0081540_1293653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300006046\|Ga0066652_100923184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300006046\|Ga0066652_101091128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300006755\|Ga0079222_11737942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300006794\|Ga0066658_10472709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300006871\|Ga0075434_101422646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300006881\|Ga0068865_100806524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300006904\|Ga0075424_101975189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300007255\|Ga0099791_10171688	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009012\|Ga0066710_102538652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300009088\|Ga0099830_10449657	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300009090\|Ga0099827_10157103	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300009090\|Ga0099827_10689244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300009137\|Ga0066709_100293369	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300009137\|Ga0066709_103321429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300009137\|Ga0066709_103895947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300009156\|Ga0111538_10972180	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300009792\|Ga0126374_11882958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300010048\|Ga0126373_11324205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300010303\|Ga0134082_10262574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300010320\|Ga0134109_10329117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300010322\|Ga0134084_10148697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300010325\|Ga0134064_10095305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300010329\|Ga0134111_10509145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300010337\|Ga0134062_10596658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300010362\|Ga0126377_12069398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300010364\|Ga0134066_10188732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300010366\|Ga0126379_10020466	All Organisms → cellular organisms → Bacteria	4946	Open in IMG/M
3300010373\|Ga0134128_11431737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300010375\|Ga0105239_11497972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300011271\|Ga0137393_10666089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300011998\|Ga0120114_1117044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300012200\|Ga0137382_10612242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300012201\|Ga0137365_10479361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300012205\|Ga0137362_10412567	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300012205\|Ga0137362_11423337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300012208\|Ga0137376_11054186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300012210\|Ga0137378_11107330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300012359\|Ga0137385_10549312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	974	Open in IMG/M
3300012361\|Ga0137360_10131439	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300012361\|Ga0137360_11659307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300012362\|Ga0137361_10961538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300012363\|Ga0137390_11856629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012930\|Ga0137407_11674150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300012944\|Ga0137410_10883379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	755	Open in IMG/M
3300012951\|Ga0164300_10673852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300012951\|Ga0164300_11164700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300012957\|Ga0164303_10672949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300012960\|Ga0164301_10609859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300012977\|Ga0134087_10349240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300012989\|Ga0164305_10905393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300013296\|Ga0157374_10200145	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300013297\|Ga0157378_10672681	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300014157\|Ga0134078_10177643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300015242\|Ga0137412_10407166	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300015372\|Ga0132256_103113792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300018028\|Ga0184608_10523382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300018431\|Ga0066655_10328151	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300018431\|Ga0066655_11390448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300018468\|Ga0066662_11645264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300018482\|Ga0066669_10957431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300020018\|Ga0193721_1058165	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300021560\|Ga0126371_10431208	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300021560\|Ga0126371_12404985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300025290\|Ga0207673_1061869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300025920\|Ga0207649_10783890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300025922\|Ga0207646_11410527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300025923\|Ga0207681_11699095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300025925\|Ga0207650_10748197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300025937\|Ga0207669_10912237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300025940\|Ga0207691_11515890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300025944\|Ga0207661_11120294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300025945\|Ga0207679_10922096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300025972\|Ga0207668_11218703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300026295\|Ga0209234_1264055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300026318\|Ga0209471_1158030	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300026326\|Ga0209801_1129353	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300026548\|Ga0209161_10307100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300027552\|Ga0209982_1044120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300028828\|Ga0307312_10290981	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300031938\|Ga0308175_100037411	All Organisms → cellular organisms → Bacteria	4082	Open in IMG/M
3300032000\|Ga0310903_10769071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300032177\|Ga0315276_11902886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300032397\|Ga0315287_11913766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.19%
Host-Associated	Host-Associated	22.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.56%
Plants	Host-Associated → Plants	22.81%
Aquatic	Environmental → Aquatic	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.77%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Sediment	Environmental → Aquatic → Sediment	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.16%
Loam	Environmental → Terrestrial → Soil → Loam	11.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.26%
Lake	Environmental → Aquatic → Freshwater → Lake	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24034J26672_101134762	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MVQAAARSAQPYRRHILGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSSAARKLSED
Ga0062594_1007607112	3300005093	Soil	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVELMHARHSAACEALVMATENAGDAAASIDSKS
Ga0062594_1015940982	3300005093	Soil	MRDEQVGNTTQVAARSAQPYRRHIVGLPLQRSLFGLTARAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTKALRSWFTPETLELMHTTHTAACDALVDASETATRVAASLDGAARKLSEDLANKMALVLAYGILSKFV
Ga0066672_100661221	3300005167	Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTETLRSWFTPETLEQMHATHATACHALVDATENAARVAASLESASARKLSENLANKMALVLAYGILSKFVPD
Ga0065712_105630821	3300005290	Miscanthus Rhizosphere	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVELMHARHSAACDALVMATENAGDAAASIDSKSARKLSEDLANKMALVLTYGILSKF
Ga0070690_1003925761	3300005330	Switchgrass Rhizosphere	MEVTGISTIASASTGSAQPYRRHIIGLPLQRSLFGLTARAATTIGLPGLSSESNFPARLDENGDLFLDRSQVIALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSSAARKLSEDLANRMALVLAYGILSKFVP
Ga0066388_1039460831	3300005332	Tropical Forest Soil	MQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSEMDFPARLDENGDLFLDRSQLATLSKTLTSWFTRETLEQMHITHAIACDALVDVSEHAARVAVSLDSASARKLSENLANKMAFVLAYGILSKFVPDL
Ga0066388_1073623391	3300005332	Tropical Forest Soil	MLDEVKLVSNMPQMAAGSAQPYRRHIVGLPLQRSLFGHAARAATTIGLPGLTSEADFPARLDENGDLFLERSQVALLTKALPSWFTPETLQRMYARHAAACDSLLDATENAVGVAGSLDGDARKLAEDLAIRMAL
Ga0070677_105214001	3300005333	Miscanthus Rhizosphere	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVALMHARHSAACDALVMATENAGDAAASI
Ga0070708_1016836781	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLGEVEQVGNMAQAAARSARPYRRHIIGLPLQRSLFGLTARAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTKALHSWFTPETRELMDTAHAAACDALVDASENAARVAVSLNAASARKLFEDLAKRMALVLAY
Ga0066682_103571212	3300005450	Soil	MAQAVEKSAQPYRRHIVGLPLQRSLFREAAGAATTIGLPGLSSELDFPARLDENGDLFLDRLQVAALTKALPSWLTLETLELMHATHADACDALVDATENAAHVAASLNGTSARKLSEDLANRMALVLAYGVLSKFVPDILLRALANAGDVEPPP
Ga0070706_1013821302	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLDEVKQVGNIARAATPSAQPYRRYIVGLPLQRSLFGQAARAATTIGLPALASELDFPARLDENGDLFLDRSRVAALIKALLSWFTPETLALMHTTHAAACQALVDATQDAARVAASLNGRSATKLSEDLGNKMALVLAYGILS
Ga0070707_1009130712	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMQPAAISGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSELDFPARLDENGDLFLDRSQLAVLSKTLAPWFTRETLELMHITHATACDALVDASEHAARVAVSLDSASASKLSENLANKMALVLAYGILSKFVPDL
Ga0070707_1017076711	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLDEVKQVGNMAQAAATSAQPYRRYIVGLPLQRSLFGQAARAATTIGLAGLSSERDFPARLDENGDLFLDRSKVAALAKALPSWFTPKTLELMHTTHAAACGALVAASENAARADTS
Ga0066697_102292711	3300005540	Soil	MRDEVKQVSNKAQAAATSAQPYRRHIVGLPLQRSLFVQAARGATTIGLPGLSSELDFPAWLDENGDLFLDRSQVAALSKALPSWFTPETLELMHTRHAAACDALVDASENAARVAVSLNGGSA
Ga0070672_1011353491	3300005543	Miscanthus Rhizosphere	MRNETVGNTAQAAERSAQPYRRHIVGLPLQRSLFRLTAQAATTIGLPGLSSELDFPARLNENGDLFLDRSQVATLTQALRAWFTPEILELMPTRHAAACEALVDASENSMRLVASGEDAATKLSEDLANRMALV
Ga0070693_1002459183	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVALMHARHSAACEALVMATENAGDAAASIDSKSARKLSEDLANKMALVL
Ga0066698_109581242	3300005558	Soil	MAQAAAKSAQPYRRHIVGLPLQRSLFREAARAATTVGLPGLSSEQDFPARLDENGDLFLDRSQVAALTKALLSWFTPETLERMHRTHAAACDALVDASENAARVAASLDGAARKLSEDLANRMALV
Ga0066670_105440882	3300005560	Soil	MRDEVKQVSNKAQAAATSAQPYRRHIVGLPLQRSLFVQAGRGATTIGLPGLSSELDFPAWLDENGDLFLDRSQVAALSKALPSWFTPETLELMHTRHAAACDALVDASENAARVAVSLNG
Ga0066703_103264591	3300005568	Soil	MMQPAAISGQPYRRHIIGLPLQRSLFGQAARAATTIGLPGLTSEREFPARLDEKGDLFLDRSQVVRLTKALRSWFIPETLECMHATHIAACHALVDTTENAARVAASLDSPAARKLS
Ga0066705_105384111	3300005569	Soil	MRDEVKQVSNKAQAAATSAQPYRRHIVGLPLQRSLFVQAARGATTIGLPGLSSELDFPAWLDENGDLFLDRSQVAALSKALPSWFTPETLELMHARHAAACDALVDASENGARAAVSLNGASARKSSEDLANRMALVLAYGILSKFVPD
Ga0066654_102399263	3300005587	Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENAARVAASLESASARKLSENLAN
Ga0066706_105584182	3300005598	Soil	MAQAAEKSAQPYRRHIVGLPLQRSLFREAARAATTIGLPGICSEQDFPARLNDNGDLFLDRSQVAALAKALPSWFTRENLELMQTTHAAACDALVDASEHAARAAVSLNDASARKLSEHLANRMALVLAYGILSKFVPD
Ga0066903_1003535765	3300005764	Tropical Forest Soil	MLDEVRQVGNTPRIATRSAQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSELDFPAQLDGNGNLFLDRSQVAALTKALGSWFSPETLERMHTTHAAACDALVDASENAARVAASHDGAARKLFEDLANRMA
Ga0066903_1069642231	3300005764	Tropical Forest Soil	MLSEGSLVESKERPTPRTPQPYRRHIVGLPLQRSLFGLTAQAATTIGLPDLRSEFDFPARLDENGDLFLDRAKVTALTNSLRSWFTPETLELMRTTQAAACDALVEASEHAARVASSLDGAIGKLSADLANKMALVLAFGILSKFI
Ga0066903_1088303501	3300005764	Tropical Forest Soil	MMQPAAISGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSEMDFPARLDENGDLFLDRSQLAALSKTLTSWFTRETLEQMHITHATACDALVDISEHAARVAVSLDSASVRKLSENLANKMALVLAYGI
Ga0068863_1021111542	3300005841	Switchgrass Rhizosphere	MRNETVGNTAQAAERSAQPYRRHIVGLPLQRSLFRLTAQAATTIGLPGLSSELDFPARLNENGDLFLDRSQVATLTQALRAWFTPEILELMPTRHAAACEALVDASENSMRLVASGEDAATKLSEDL
Ga0068858_1007326851	3300005842	Switchgrass Rhizosphere	VLDEVKQVGNMVQAAARSAQPYRRHILGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSSAARKLSEDLA
Ga0081455_100466491	3300005937	Tabebuia Heterophylla Rhizosphere	MWDEQVGNTAQAAARSAQPYRRHIVGLPLQRSLFGLTARAATTIGLPGLSSELDFPARLDENGDLFLDRSKVAALTKALRSWFTPEILELMPTTHAAACDALVNASETTVPFSPSLDGAARKLCEDLANKMALVLA
Ga0081540_12936531	3300005983	Tabebuia Heterophylla Rhizosphere	MAQAAAKSAQPYRRQIVGLPLEGSLFREAARAATTIGLPGLSSEEDFPARLDENGDLFLDRSQIAALTKNLPLWFTPENLELMHTTHATACDALIDASEKAARVAVSLTDASAR
Ga0066652_1009231842	3300006046	Soil	MAQAAEKSAQPYRRHIVGLPLQRSLFGEAARAAPTIGLPALTSELDFPARLDENGDLFLDRSKVAALTKALLSWFTPATLELMRSTHAAACDVLVDATENAARAAASLNGAS
Ga0066652_1010911282	3300006046	Soil	MLDEVKQVGNMAEAAARSAQPYRRHIVGLPLQRSLFSQVARGATTIGMPGLSSERDFPARLDENGDLFLDRSQVAALTKALLSWFTPETLERMHRTHAAACDALVDASENAARVAASLDGAARKLSEDLANRMALV
Ga0079222_117379421	3300006755	Agricultural Soil	MEVERVGEIADVSPESPQPYRRHIVGLPLQRSLFNHAARAATAIGLPGLTSEEDFPARLDENGDLFLDRSQVAALTKALASWFTPETLDHMYATHAAACHALATASENPSRVVASLGAVTKLTDDLANKLALVLAYGVLSKFVPDVLLKALKDA
Ga0066658_104727091	3300006794	Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENAARVAASLESASARKLSENLANKMALVLAYG
Ga0075434_1014226462	3300006871	Populus Rhizosphere	MEVTGISTIASASTGSAQPYRRHIIGLPLQRSLFGLTARAATTIGLPGLSSESNFPARLDENGDLFLDRSQVTALTKALPSWFTPETLELMHTRHAAACDALVDASENAARAAASLNSRNRELFEDLANKMALVL
Ga0068865_1008065241	3300006881	Miscanthus Rhizosphere	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVALMHARHSAACDALVMATENAGDAAASIDSKSTRKLSEDLANKMALVLAYGILSKFVPDLLLRALADLGD
Ga0075424_1019751892	3300006904	Populus Rhizosphere	MEVTGISTIASASTGSAQPYRRHIIGLPLQRSLFGLTARAATTIGLPGLSSESNFPARLDENGDLFLDRSQVTALTKALPSWFTPETLELMHTRHAAACDALVDASENAARAAASLNSRNRELF
Ga0099791_101716881	3300007255	Vadose Zone Soil	MLDEVKLVGNVAETAANTAQPYRRHIIGLPLQRSLFGLAARAATTIGLPGLTSELDFPARLDENGDLFLDRSKVAALSKALLSWFTSETLERMRSTHAAACAALIDASENAALVSASRDGAARKLSEDLANRMALVLAYGILSKFV
Ga0066710_1025386521	3300009012	Grasslands Soil	MAQAAEKSAQPYRRHIVGLPLQRSLFGEAARAAPTIGLPALTSELDFPARLDENGDLFLDRSKVAALTKALLSWFTPATLELMRSTHAAACDVLVNATENAARAAASLNGASARKLSEDLANRMALVL
Ga0099830_104496573	3300009088	Vadose Zone Soil	MLGEVRQVGNVAQAAARSAQPYRRHIIGLPLQRSLFGQTARAATTIGFPGLSSELDFPARLDENGNLFLDRSKVAALTKALLSWFTPETLELMHTTHAAACDALVDASENAARVAASLDG
Ga0099827_101571031	3300009090	Vadose Zone Soil	MAQAAEKSAQPYRRHIVGLPLQRSLFGEAARAAPTIGLPALTSELDFPARLDENGDLFLDRSKVAALTKALLSWFTPATLELMRSTHAAACDVLVDATENAARAAASLNGASARKLSED
Ga0099827_106892442	3300009090	Vadose Zone Soil	MLDEVKLVGNVAETAANTAQPYRRHIIGLPLQRSLFGLAARAATTIGLPGLSSELDFPARLDENGDLFLDRSKVAALSKALLSWFTSETLERMRSTHAAACAALIDASENAALVSASRD
Ga0066709_1002933695	3300009137	Grasslands Soil	MMEPAATSGQPYRRHIVGLPLQRSLFGRAAKAATSIQLPGLSSELDFPAQLDENGDLFLDRSQVSVLTKALASSFTPETLERMHTTHATACDALVDVSEHAARVAPSIDS
Ga0066709_1033214291	3300009137	Grasslands Soil	MAQAVEKSAQPYRRHIVGLPLQRSLFREAAGAATTIGLPGLSSELDFPARLDENGDLFLDRLQVAALAKALPSWLTLETLELMHATHADACDALVDATENAARVAASLNGTSARKLSEDLANRMALVLAYGVLSKFVPDILLRALANGGDI
Ga0066709_1038959472	3300009137	Grasslands Soil	MLDEVKQVGNMAEAAARSAQPYRRHIVGLPLQRSLFSQVARGATTIGMPGLSSERDFPARLDENGDLFLDRSQVAALTKALLSWFTPETLERMHRTHAAACDALVDASENAARVAASLDGAARKLSEDLANRMALVLAYGILSKFVPDVLL
Ga0111538_109721801	3300009156	Populus Rhizosphere	MRDEQVGNTTQVAARSAQPYRRHIVGLPLQRSLFGLTARAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTKALRSWFTPETLELMHTTHTAACDALVDASETATRVAASLDGAARKLS
Ga0126374_118829581	3300009792	Tropical Forest Soil	MIQPAAISGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSELDFPARLDENGDLFLDRSQLATLSKTLTSWFTRETLEQMHITHATACDALVDVSEHAARVAVSLDSASAGKLSENLANKMALVLAYGILSK
Ga0126373_113242052	3300010048	Tropical Forest Soil	MLDEVRQVGNTPRIATRSAQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSELDFPAQLDGNGNLFLDRSQVAALTKALGSWFSPETLERMHTTHAAACDALVDASENAARVAASLDSDARKLSADLSNRMAL
Ga0134082_102625741	3300010303	Grasslands Soil	MRDEVKQVSNKAQAAATSAQPYRRHIVGLPLQRSLFVQAARGATTIGLPGLSSELDFPAWLDENGDLFLDRSQVAALSKALPSWFTPETLELMHTRHAAACDALVDASENAARVAVSLNGGSARQLSEDLANRMALVLAYGILSKFVPDVLLRALADACD
Ga0134109_103291172	3300010320	Grasslands Soil	MRDEVKQVSNKAQAAATSAQPYRRHIVGLPLQRSLFVQAARGATTIGLPGLSSELDFPAWLDENGDLFLDRSQVAALSKALPSWFTPETLELMHTRHAAACDALVDASENAARVAVSLNGGSARQLSE
Ga0134084_101486971	3300010322	Grasslands Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTETLRSWFTPETLEQMHATHATACHALVDATENAARVAASLESASARKLSENLANKMALVLAYGILSKFVPDLLLRAL
Ga0134064_100953052	3300010325	Grasslands Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVVSLTRALRSWFTPETLECMRATHIAACHALVDATENAARVAASRDSASARKLSENLANRMALVLAYGVLSKFVPDSLVRALAD
Ga0134111_105091452	3300010329	Grasslands Soil	MMQPAAISGQPYRRHIIGLPLQRSLFSQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLELMHARHAAACDALVDASENGARAAVSLNGASARKSSEDLANRMALVL
Ga0134062_105966581	3300010337	Grasslands Soil	MAQAVEKSAQPYRRHIVGLPLQRSLFREAAGAATTIGLPGLSSELDFPARLDENGDLFLDRLQVAALAKALPSWLTLETLELMHATHADACDALVDATENAARVAASLNGTSARKLSENLANRMALVLAYGVLSKFVPDILLRALADAGA
Ga0126377_120693981	3300010362	Tropical Forest Soil	VSKRSARPYRRHIVGLPLQRSLFGLATQAATTIGLPGLSSEFDFPARLDENGNLFLDRSKVAALSKALLSWFTPKTLERMRSTHVAACNSLVNASENAALGAASRDGEARKLSEDLAKRTALV
Ga0134066_101887322	3300010364	Grasslands Soil	MMQPAATSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPARLDEKGDLFLDRSQVVRLTKALRSWLTPETLERMHATHVAACHALVDTTQNAARVAASLDSASARKLSENLANKMALVLAYGILSK
Ga0126379_100204661	3300010366	Tropical Forest Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSEMDFPARLDENGDLFLDRSQLAALSKTLTSWFTRETLERMHITHATACDALVDISEHAARVAVSLDSASVRKLSENLANKMALV
Ga0134128_114317371	3300010373	Terrestrial Soil	LPLQRSLFGLTARAATTIGLPGLSSESNFPARLDENGDLFLDRSQVTALTKALPSSFTPEALELMHTKHAAACDGLVDESENAVRVPASLDGAVRKLAENLANRM
Ga0105239_114979721	3300010375	Corn Rhizosphere	VLDEVKQVGNMVQAAARSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVELMHARHSAACDALVLATENAGDA
Ga0137393_106660892	3300011271	Vadose Zone Soil	MLGEVRQVGNVTQAAARSAQPYRRHIVGLPLQRSLFGQTARAATTIGFPGLSSELDFPARLDENGNLFLDRSKVAALTKALLSWFTPETLELMHTTHAAACDALVDASENAARVAASLDGAARKLSEDL
Ga0120114_11170441	3300011998	Permafrost	MEVKGLGNIAHVSLGSAQPYRRYIVGLPLQRSLFNQAARAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLELMHTTHAAACDALVDASENAARVAASLDGAARKLSEDLANRIALVLAY
Ga0137382_106122422	3300012200	Vadose Zone Soil	MMQPAATSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPARLDENGDLFLDRSQVVRLTKALRSWFTPETLECMHATHIAACHALVDTTENAARVAASLDSPAARKLSENLANKMALVLAYGILSKFVPDLLLRALVDAGDVEL
Ga0137365_104793611	3300012201	Vadose Zone Soil	MAQAAEKSAQPYRRHIVGLPLQRSLFREAAGAATTIGLPGLSSELDFPARLDENGDLFLDRLQVAALTKALLSWLTLETLELMHATHADACDALVDATENAARVAASLNGEARELSEDLANKMALVLAYGILSKFVPDVLL
Ga0137362_104125671	3300012205	Vadose Zone Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPARLDENGDLFLDRSQVVLLTKALRSWFTLQTLEHMHATHVAACHALVDATENAARVAASLESASARKLSENLANKMALVLAYGILSKFVPDL
Ga0137362_114233371	3300012205	Vadose Zone Soil	MEVTGIGNIASASTGSGQPYRRHIIGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLELMHTRHAAACDALVDATENAGRVAVSLDGAARKLLKDLANRMALVLVYGILSKFVPDVLWRALADA
Ga0137376_110541862	3300012208	Vadose Zone Soil	MLDEVKQVGNMAEAAARSAQPYRRHIVGLPLQRSLFREAAGAATTIGLPGLSSELDFPARLDENGDLFLDRLQVATLTKALPSWLTLETLELMHATHADACDALVDATENAAHVAASLNGTSARKLSEDLAN
Ga0137378_111073302	3300012210	Vadose Zone Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHAMHATACHALVDATENAARVAASLESASAKKLSENLAN
Ga0137385_105493122	3300012359	Vadose Zone Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENAARVAASLGSASARKLSENLANKMALVLAYGILSKF
Ga0137360_101314395	3300012361	Vadose Zone Soil	MMQPAATSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPARLDENGDLFLDRSQVVLLTKALRSWFTLETLEHMHATHVAACHALVDATENAARVAASLESASARKLSENLANKMALVLAYGILSKFVPDLLLRALVDAGDVEPP
Ga0137360_116593071	3300012361	Vadose Zone Soil	MMQPAAISGQPYRRHIVGLPLQRSLFGQAAWAATTIGLPGLTSEREFPARLDEKGDLFLDRSQVVRLTKALRSWFTPETLKCMHATHIAACHALVDTTENAARVAASLDSPAARKLSENLANKMALVLAYGILSKFVPDLLLRALVDAGDVEPP
Ga0137361_109615382	3300012362	Vadose Zone Soil	MEVKGVGNIANAPQGSAQPYRRYIVGLPLQRSLFNQAARAATRIGLPGLTSEADFPARLDEDGDLFLDRSQVAALTKALRSWFTPETLELMHTRHAAACNALVDASENAARVAASLDGAARKLSEDLANK
Ga0137390_118566291	3300012363	Vadose Zone Soil	MMQPAAISGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSELDFPARLDENGDLFLDRSQLAALSKTLASWFTRETLELMHITHATACDALVDASEHAARVAVSLDSDSASKLSENLANKM
Ga0137407_116741502	3300012930	Vadose Zone Soil	MLDEVKQVGNIARAAPRSAQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENAARVAASLESASARKLSENLANKMALVLAYGILSKFVPDLLLRALADA
Ga0137410_108833791	3300012944	Vadose Zone Soil	MMQPAAISGQPYRRHIIGLPLQRSLFGQAARAATTIGLPGLTSEQDFPARLDENGDLFLERSQVAVLTKALRSWFTPETLQRMHATHAAACDALVDSTENAARVAASLDSDARKLAEDLANRRALVLAYGVLSKFVPDVVLRALAEAGDVEPPP
Ga0164300_106738522	3300012951	Soil	MDEVRQVGNVTEAAPESAQPYRQHIIGLPLQRSLFGLTARAATTIGLPGLSSESNFPARLDENGDLFLDRSQVTALTKALPSSFTPEALELMHTKHAAACDALVDATENAARAAVSLNSKDSDLFEDLANKMALLLAYGILSKFVPDVLLRALADAG
Ga0164300_111647002	3300012951	Soil	VLDEVKQVGNMVQAAARSAQPYRRHILGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQVSVLTKALASSFTPETLERMHTTHATACDALVDVSEHAARVAPSIDSASAR
Ga0164303_106729492	3300012957	Soil	LQRSLFGLTARAATTIGLPGLSSKSNFPARLDENGDLFLDRSQVTALTKALPSSFTPEALELMHTKHAAACDALVDATENAARAAVWLN
Ga0164301_106098592	3300012960	Soil	VLDEVKQVGNMAQAAARSAQPYRRHILGLPLQRSLFGQAARAATRIGLPGLTSELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSSAARKLSEDLA
Ga0134087_103492401	3300012977	Grasslands Soil	MAQAAEKSAQPYRRHIVGLPLQRSLFREAARVAPTIGLPALTSELDFPARLEENGDLFLDRSKVAALTKALLSWFTPATLELMRSTHAAASDVLVDATENAARAAASLNGAS
Ga0164305_109053932	3300012989	Soil	MLDEVRQVGNVAQAAARSARPYRRHIIGLPLQRSLFGLTARAATTIGLPGLSSESNFPARLDENGDLFLDRSQVTALTKALPSSFTPEALELMHTKHAAACDALVDATENAARAAVSLNSKDS
Ga0157374_102001451	3300013296	Miscanthus Rhizosphere	MRNETVGNTAQAAERSAQPYRRHIVGLPLQRSLFRLTAQAATTIGLPGLSSELDFPARLNENGDLFLDRSQVATLTQALRAWFTPEILELMPTRHAAACEALVDASENSMRLVASGEDAATKLSEDLANRMAL
Ga0157378_106726811	3300013297	Miscanthus Rhizosphere	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVALMHARHSAACDALVMATENAGDAAASIDSKSARKLSEDLANKMALVLTYGI
Ga0134078_101776431	3300014157	Grasslands Soil	MMQPAAISGQPYRRHIIGLPLQRSLFGQAARAATTIGLPGLTSEQEFPARLDENGDLFLDRSQVVSLTRALRSWFTPETLERMHATHVAACHALVDATENAARVAASRDSASARKLSENLANKMA
Ga0137412_104071661	3300015242	Vadose Zone Soil	MEVTGIGNIASASTGSGQPYRRHIIGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLALMHTRHAAACDALVDATENAGRVAVSLDGAARKLLKGLANRMALVLVYGILSKFVPD
Ga0132256_1031137921	3300015372	Arabidopsis Rhizosphere	MEVTGIGNIASASTGSGQPYRRYIVGLPLQRSLFNRAARAAATIGLPGLSSEADFPARLNENGDLFLDRSQVTVLTKALSSWFTPETLERMCTTHAAACDALVDASENAARVAASSDGAAREL
Ga0132257_1035498682	3300015373	Arabidopsis Rhizosphere	LPLQRSLFNQAALAAATIGLPDLSSEADFPARLDENGDLFLNRSQVTVLTKALASRLTPETLERMHTKHAAACDVLVDATEDAARAAASLNGAPARKLSEDLA
Ga0184608_105233822	3300018028	Groundwater Sediment	MEVEGVSNIAHASPGSAQPYRRYIVGLPLQRSLFGLTARAATTIGLPGLSSELDFPARLDENGDLFLDRLQVAAQTEALPSWFTPETLELMHTRHAAACDALVDATENAGRVAVSLDGAARKLLEDLANKMAL
Ga0066655_103281511	3300018431	Grasslands Soil	MIQPVATSGPPYRRPIVGLPLQRSLFGQAAKAATSIQLPGLSSEVDFPARLDENGDLFLNRLHVSVLSKALASSFTPETLERMHTTHAAACDSLLDVSEHAARVAPSIDSASARKFSENLASTMPLVLP
Ga0066655_113904481	3300018431	Grasslands Soil	MQPVATSGPPYRRHIVGLPLQRSLFGQAAQAATSVQLPGLSSELDFPARLDENGDLFLDRSQVSVLSKALASSFTPESLERMHITHAAACDTLIDVSEHAARVASSSDSASARELS
Ga0066662_116452642	3300018468	Grasslands Soil	MQPYRQHIIGLPLQRSLFGLTGRAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTRALPSWFTPETLELMHMKHAAACDGLVEESENAVRVPASLDGAVSKLAEN
Ga0066669_109574311	3300018482	Grasslands Soil	MMQPVATPGQPYRRHIVGLPLQRSLFGQAAQAATSIQLPGLSSELDFPARLDENGDLFLDRSQVSVLSKALALSFTPETLERMHTTHAAACDSLVEVSGQAGRVAPSIDSASARELSENLANKMALVLAYGILS
Ga0193721_10581653	3300020018	Soil	MEVTGIGNIASASTGSGQPYRRHIIGLPLQRSLFGQAARAATTMGLPGLASELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLELMHTRHAAACDALVDATENAGRVAVSLDGAARKLLKDL
Ga0126371_104312083	3300021560	Tropical Forest Soil	MTQPAAISGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSEMDFPARLDENGDLFLDRSQLAALSKILTSWFTRETLEQMHITHATACDALVDVSEHAARVAVSLDSASARKLSENLANKMALVLAYGILSKFVPD
Ga0126371_124049851	3300021560	Tropical Forest Soil	MLDQVKLAGKTPQVTGRSAQPYRRHIVGLPLQRSLFANAARAATTIGLPGLISEQDFPAQLDENGDLFLDRSQVAALTKALSSRVTPETLERMHTTHAAACDALVDATDNAAR
Ga0207673_10618692	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	VLDEVKQVGNMAQAAARSAQPYRRHILGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLDSAARKLSEDLANRMALVM
Ga0207649_107838902	3300025920	Corn Rhizosphere	VLDEVKQVGNMAQAAARSAQPYRRHILGLTLQRSLFGQAARAATRIGLPGLTSELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSSAARKLS
Ga0207646_114105271	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQPAAISGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLSSELDFPARLDENGDLFLDRSQLAVLSKTLAPWFTRETLELMHITHATACDALVDASEHAARVAVSLDSASASKLSENLANKMALVLAYGV
Ga0207681_116990951	3300025923	Switchgrass Rhizosphere	VLDEVKQVGNMAQAAARSAQPYRRHILGLTLQRSLFGQAARAATRIGLPGLTSELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLGSAARKLSED
Ga0207650_107481972	3300025925	Switchgrass Rhizosphere	VLDEVKQVGNMVQAAARSAQPYRRHILGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAAS
Ga0207669_109122371	3300025937	Miscanthus Rhizosphere	VLDEVKQVGNMVQAAARSAQPYRRHILGLPLQRSLFGQAARAATTIGLPGLASELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSS
Ga0207691_115158902	3300025940	Miscanthus Rhizosphere	MRNETVGNTAQAAERSAQPYRRHIVGLPLQRSLFRLTAQAATTIGLPGLSSELDFPARLNENGDLFLDRSQVATLTQALRAWFTPEILELMPTRHAAACEALVDASENSMRLVASGEDAATKLSEDLANRMALVLA
Ga0207661_111202942	3300025944	Corn Rhizosphere	VLDEVKQVGNMVQAAARSAQPYRRHILGLTLQRSLFGQAARAATRIGLPGLTSELDFPARLDENGDLFLDRSQITALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASLSSAARKLSEDLANRMALVLAYGILSKF
Ga0207679_109220962	3300025945	Corn Rhizosphere	MEVTGIENLAFTGSAQPYRRHIIGLPLQRSLFRQATQAATTIGLPGLTAESDFPAQLDENGDLFLDRSQIAALSKGLLAWFTSETVELMHARHSAACDALVMATENAGDAAASIDSKSARKLSEDLANKMALVL
Ga0207668_112187031	3300025972	Switchgrass Rhizosphere	VLDEVKQVGNMAQAAARSAQPYRRHILGLTLQRSLFGQAARAATRIGLPGLTSELDFPARLDENGDLFLDRSQVAALTKALPSWFTPETLELMHTTHVAACDALVDASENAARVAASL
Ga0209234_12640552	3300026295	Grasslands Soil	MMQPAAISGQPYRRHIIGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENATRVAASLDSASARKLSENLANKMALVLAYGILSKFVPDLLLRARGDP
Ga0209471_11580302	3300026318	Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENAARVAASLESA
Ga0209801_11293533	3300026326	Soil	MMQPAAMSGQPYRRHIVGLPLQRSLFGQAARAATTIGLPGLTSEQEFPAQLDENGDLFLDRSQVAVLTEALRSWFTPETLEQMHATHATACHALVDATENAARVAASLESASARKLSENL
Ga0209161_103071001	3300026548	Soil	MQPYRQHIIGLPLQRSLFGVTGRAATTIGLPGLSSELDFPARLDENGDLFLDRSRVAALTRALPSWFTPETLELMHTKHAAACDGLVEESENAVRVPASLDGAVSKLAENLANR
Ga0209982_10441202	3300027552	Arabidopsis Thaliana Rhizosphere	MRDEQVGNTTQVAARSAQPYRRHIVGLPLQRSLFGLTARAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTKALRSWFTPETLELMHTTHTAACDALVDASETATRVAASLDGAA
Ga0307312_102909813	3300028828	Soil	MEVTGIGNIASASTGSGQPYRRHIIGSPLQRSLFGQAARAATTMGLPGLASELDFPARLDENGDLFLDRSQVAVLTKALPSWFTPETLELMHTRHAAACDALVDASEHAARAAVSFNDASARKL
Ga0308175_1000374115	3300031938	Soil	MLDESKQVGNMAEAAARAAQPYRRHIVGLPLQRSLFGQAARAATKIGLPGLTSELDFPARLDENGDLFLDGSQVATLSKALPAWFTPETLELMHTRHAAACDALVNASENAARGAASLDRAARELSQDLADKMALV
Ga0310903_107690712	3300032000	Soil	MAQAAARSAQPYRRHILGLTLQRSLFGQAARAATRIGLPGLTSELDFPARLDENGDLFLDRSQVAALTKALRSWFTPETLELMHTTHTAACDALVDASETATRVAASLDGAARKLSEDLA
Ga0315276_119028862	3300032177	Sediment	MRDEQLGKIAQVGARSAQPYRRHIVGLPLQRSLFGLTAQAATTIGLPGLSSELDFPARLDETGDLFLDRSQVAALSEALPSWFTPETLELMDTRLAAACDALVDASGNAARGAASLDGAARILSEDLANRMALVLAYGILSKFVPDVLLRALADAGDVEP
Ga0315287_119137662	3300032397	Sediment	MRDEQLGNIAQVAARSAQPYRRHIVGLSLQRSLFGLTAQAATTIGLPGLSSELDFPARLDENGDLFLDRSQVAALTKALLSWFTPETLELMHTRHAAACDALVDATENAARAAASLDGAPRKLSEDLANRMALVLAYGILSKFVPDVLLRALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081177

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences