Metagenome / Metatranscriptome Family F081151

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081151
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	50 residues
Representative Sequence	MKQYKFTVVVRSPLDIKDIVWAFTHKLKDAFPIVSITFDEVKDDKKDESPYNEIPERY
Number of Associated Samples	39
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.18 %
% of genes near scaffold ends (potentially truncated)	52.63 %
% of genes from short scaffolds (< 2000 bps)	86.84 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.789 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (35.965 % of family members)
Environment Ontology (ENVO)	Unclassified (63.158 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.246 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.42% β-sheet: 0.00% Coil/Unstructured: 75.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF12098	DUF3574	7.89
PF14700	RPOL_N	6.14

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
All Organisms	root	All Organisms	34.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Viruses	superkingdom	All Organisms → Viruses	34.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.75 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.75 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.75 %
Tangaroavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Tangaroavirus	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.70 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.75 %
Tangaroavirus PSSP10	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Tangaroavirus → Tangaroavirus PSSP10	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001957\|GOS2250_1012815	Not Available	1389	Open in IMG/M
3300006793\|Ga0098055_1262837	Not Available	648	Open in IMG/M
3300006928\|Ga0098041_1008426	All Organisms → Viruses → Predicted Viral	3467	Open in IMG/M
3300006928\|Ga0098041_1016982	All Organisms → Viruses → Predicted Viral	2390	Open in IMG/M
3300006928\|Ga0098041_1041715	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1491	Open in IMG/M
3300006928\|Ga0098041_1091475	Not Available	982	Open in IMG/M
3300006928\|Ga0098041_1101914	Not Available	927	Open in IMG/M
3300006928\|Ga0098041_1181854	Not Available	674	Open in IMG/M
3300006928\|Ga0098041_1188921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	660	Open in IMG/M
3300006928\|Ga0098041_1236719	Not Available	583	Open in IMG/M
3300006928\|Ga0098041_1309348	Not Available	502	Open in IMG/M
3300007963\|Ga0110931_1193612	Not Available	608	Open in IMG/M
3300008097\|Ga0111541_10168568	Not Available	909	Open in IMG/M
3300009593\|Ga0115011_10033018	All Organisms → Viruses → Predicted Viral	3487	Open in IMG/M
3300009593\|Ga0115011_10185532	All Organisms → Viruses → Predicted Viral	1529	Open in IMG/M
3300009593\|Ga0115011_10190885	All Organisms → Viruses → Predicted Viral	1508	Open in IMG/M
3300009593\|Ga0115011_10382571	All Organisms → Viruses → Predicted Viral	1091	Open in IMG/M
3300009593\|Ga0115011_10763695	Not Available	797	Open in IMG/M
3300009593\|Ga0115011_10894077	Not Available	743	Open in IMG/M
3300009593\|Ga0115011_11227266	Not Available	648	Open in IMG/M
3300009677\|Ga0115104_10188580	All Organisms → Viruses → Predicted Viral	1621	Open in IMG/M
3300009677\|Ga0115104_10318373	All Organisms → Viruses → Predicted Viral	1748	Open in IMG/M
3300009679\|Ga0115105_10005435	Not Available	973	Open in IMG/M
3300009679\|Ga0115105_10036705	All Organisms → Viruses → Predicted Viral	1699	Open in IMG/M
3300009679\|Ga0115105_10042045	All Organisms → Viruses → Predicted Viral	2619	Open in IMG/M
3300009679\|Ga0115105_10103423	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300009679\|Ga0115105_10221590	All Organisms → Viruses → Predicted Viral	2149	Open in IMG/M
3300009679\|Ga0115105_10222204	Not Available	646	Open in IMG/M
3300009679\|Ga0115105_10555488	Not Available	544	Open in IMG/M
3300009679\|Ga0115105_10860497	Not Available	726	Open in IMG/M
3300009679\|Ga0115105_10966908	All Organisms → Viruses → Predicted Viral	1624	Open in IMG/M
3300009679\|Ga0115105_10968810	Not Available	550	Open in IMG/M
3300009679\|Ga0115105_11119870	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300009679\|Ga0115105_11161653	All Organisms → Viruses → Predicted Viral	1900	Open in IMG/M
3300009679\|Ga0115105_11203942	Not Available	579	Open in IMG/M
3300009679\|Ga0115105_11223051	All Organisms → Viruses → Predicted Viral	2184	Open in IMG/M
3300009790\|Ga0115012_10136520	All Organisms → Viruses → Predicted Viral	1755	Open in IMG/M
3300009790\|Ga0115012_10326485	Not Available	1161	Open in IMG/M
3300009790\|Ga0115012_10482441	Not Available	965	Open in IMG/M
3300009790\|Ga0115012_10906714	Not Available	721	Open in IMG/M
3300009790\|Ga0115012_11235373	Not Available	630	Open in IMG/M
3300009790\|Ga0115012_11368063	Not Available	602	Open in IMG/M
3300009790\|Ga0115012_11593318	Not Available	565	Open in IMG/M
3300009794\|Ga0105189_1000649	All Organisms → Viruses → Predicted Viral	3333	Open in IMG/M
3300009794\|Ga0105189_1009282	Not Available	904	Open in IMG/M
3300009794\|Ga0105189_1022379	Not Available	603	Open in IMG/M
3300009794\|Ga0105189_1022406	Not Available	603	Open in IMG/M
3300010148\|Ga0098043_1105479	Not Available	820	Open in IMG/M
3300011013\|Ga0114934_10391165	Not Available	620	Open in IMG/M
3300012952\|Ga0163180_10081835	All Organisms → Viruses → Predicted Viral	2018	Open in IMG/M
3300012952\|Ga0163180_10555640	Not Available	867	Open in IMG/M
3300012952\|Ga0163180_11086129	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Tangaroavirus → Tangaroavirus PSSP10	646	Open in IMG/M
3300012952\|Ga0163180_11250798	Not Available	608	Open in IMG/M
3300012952\|Ga0163180_11492672	Not Available	565	Open in IMG/M
3300012953\|Ga0163179_10073043	All Organisms → Viruses → Predicted Viral	2417	Open in IMG/M
3300012953\|Ga0163179_10256523	All Organisms → Viruses → Predicted Viral	1365	Open in IMG/M
3300012953\|Ga0163179_10511919	Not Available	994	Open in IMG/M
3300012953\|Ga0163179_10887361	Not Available	770	Open in IMG/M
3300012953\|Ga0163179_11648889	Not Available	581	Open in IMG/M
3300012953\|Ga0163179_12055764	Not Available	527	Open in IMG/M
3300017720\|Ga0181383_1087365	Not Available	836	Open in IMG/M
3300017720\|Ga0181383_1144219	Not Available	640	Open in IMG/M
3300017730\|Ga0181417_1088036	Not Available	751	Open in IMG/M
3300017730\|Ga0181417_1174398	Not Available	517	Open in IMG/M
3300017745\|Ga0181427_1149769	Not Available	565	Open in IMG/M
3300017745\|Ga0181427_1175338	Not Available	517	Open in IMG/M
3300017750\|Ga0181405_1123406	Not Available	646	Open in IMG/M
3300017753\|Ga0181407_1117058	Not Available	666	Open in IMG/M
3300017757\|Ga0181420_1164414	Not Available	657	Open in IMG/M
3300017759\|Ga0181414_1066026	Not Available	963	Open in IMG/M
3300017759\|Ga0181414_1144390	Not Available	623	Open in IMG/M
3300017760\|Ga0181408_1131037	Not Available	648	Open in IMG/M
3300017767\|Ga0181406_1018285	All Organisms → Viruses → Predicted Viral	2230	Open in IMG/M
3300017768\|Ga0187220_1075731	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M
3300017771\|Ga0181425_1025832	All Organisms → Viruses → Predicted Viral	1941	Open in IMG/M
3300017771\|Ga0181425_1191780	Not Available	643	Open in IMG/M
3300017779\|Ga0181395_1176508	Not Available	669	Open in IMG/M
3300020411\|Ga0211587_10279240	Not Available	688	Open in IMG/M
3300020421\|Ga0211653_10093926	All Organisms → Viruses → Predicted Viral	1336	Open in IMG/M
3300020421\|Ga0211653_10202845	Not Available	870	Open in IMG/M
3300020436\|Ga0211708_10330468	Not Available	622	Open in IMG/M
3300020445\|Ga0211564_10148095	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300020445\|Ga0211564_10355663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	720	Open in IMG/M
3300020457\|Ga0211643_10170318	Not Available	1072	Open in IMG/M
3300020457\|Ga0211643_10288349	Not Available	806	Open in IMG/M
3300020459\|Ga0211514_10388966	Not Available	686	Open in IMG/M
3300020459\|Ga0211514_10487770	Not Available	606	Open in IMG/M
3300020471\|Ga0211614_10049829	All Organisms → Viruses → Predicted Viral	1748	Open in IMG/M
3300020472\|Ga0211579_10045116	All Organisms → Viruses → Predicted Viral	2758	Open in IMG/M
3300020472\|Ga0211579_10170248	All Organisms → Viruses → Predicted Viral	1275	Open in IMG/M
3300020472\|Ga0211579_10213614	Not Available	1117	Open in IMG/M
3300020472\|Ga0211579_10291918	Not Available	933	Open in IMG/M
3300020472\|Ga0211579_10327005	Not Available	874	Open in IMG/M
3300020472\|Ga0211579_10535251	Not Available	659	Open in IMG/M
3300025110\|Ga0208158_1002655	Not Available	5472	Open in IMG/M
3300025110\|Ga0208158_1009913	All Organisms → Viruses → Predicted Viral	2619	Open in IMG/M
3300025110\|Ga0208158_1028062	All Organisms → Viruses → Predicted Viral	1448	Open in IMG/M
3300025110\|Ga0208158_1028398	Not Available	1438	Open in IMG/M
3300025110\|Ga0208158_1052524	Not Available	1000	Open in IMG/M
3300025110\|Ga0208158_1056126	Not Available	963	Open in IMG/M
3300025110\|Ga0208158_1101578	Not Available	675	Open in IMG/M
3300025110\|Ga0208158_1116834	Not Available	620	Open in IMG/M
3300026134\|Ga0208815_1002061	All Organisms → Viruses → Predicted Viral	3928	Open in IMG/M
3300026134\|Ga0208815_1018075	Not Available	935	Open in IMG/M
3300026134\|Ga0208815_1018610	Not Available	919	Open in IMG/M
3300026134\|Ga0208815_1026429	Not Available	754	Open in IMG/M
3300027906\|Ga0209404_10042041	All Organisms → Viruses → Predicted Viral	2566	Open in IMG/M
3300027906\|Ga0209404_10081454	All Organisms → Viruses → Predicted Viral	1885	Open in IMG/M
3300027906\|Ga0209404_10261197	All Organisms → Viruses → Predicted Viral	1094	Open in IMG/M
3300027906\|Ga0209404_10646515	Not Available	710	Open in IMG/M
3300027906\|Ga0209404_10798439	Not Available	641	Open in IMG/M
3300027906\|Ga0209404_10983717	Not Available	578	Open in IMG/M
3300029448\|Ga0183755_1054250	Not Available	987	Open in IMG/M
3300032006\|Ga0310344_10760740	Not Available	823	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	53.51%
Unclassified	Environmental → Aquatic → Marine → Unclassified	29.82%
Strait	Environmental → Aquatic → Marine → Strait	14.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.88%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	53.51%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	29.82%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	14.91%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	35.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	29.82%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	14.91%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	9.65%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	7.02%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.88%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.88%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001957	Marine microbial communities from Wolf Island, Equador - GS035	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300009794	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020459	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300026134	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2250_10128153	3300001957	Marine	MKQYKFTIVVRSPMDVKDMVWAFSHKLKDAFPIVSISFDEVNDDKKDNSDYTNIPERY*
Ga0098055_12628373	3300006793	Marine	MKQYKFTIGIRTPMDVKDVIWAFTHKLKDVFPIVSIDFTEVKDVDKSDYTNIPERY*
Ga0098041_10084267	3300006928	Marine	MKQYKFTIVVRSPMDVKDIIWSFTQKLKDVFPIVSIDFTEVKDVDKSDYTDIPERY*
Ga0098041_10169824	3300006928	Marine	MKQYKFTVVVRTPMDVKNIVWAFTHKLKDAFPIVSIDFTEVKDVEDRKPEYTDIPERY*
Ga0098041_10417153	3300006928	Marine	MKQYKFTIVVRSPMDVKDMVWAFTNKLKDAFPIVSISFDEVKDDKKEDSDYTNIPERY*
Ga0098041_10914755	3300006928	Marine	VVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDDYKDIPERY*
Ga0098041_11019143	3300006928	Marine	MKQYKFTIVVRSPMDVKDMVWAFSNKLKDVFPIVSISFDEVKDDKKDESPYNEIPKRY*
Ga0098041_11818543	3300006928	Marine	VRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY*
Ga0098041_11889211	3300006928	Marine	IGVRSGMDVKDIIWAFTQKLKDVFPIVSISFDEVKDDKESNPEYNEIPKRY*
Ga0098041_12367191	3300006928	Marine	KDLVWAFTNKLKDVFPIVSITFDEIKDDEYKDIPERY*
Ga0098041_13093483	3300006928	Marine	MKQYKFTIVVRSPMDVKDMVWAFTHKLKDAFPIVSISFDEVSDR
Ga0110931_11936124	3300007963	Marine	MKQYKFTIVVRSPMDVKDMVWAFTHKLKDAFPIVSISFDEVKDDKK
Ga0111541_101685683	3300008097	Marine	MKQYKFTVVVNSPMNIKDILWAFTHKLKDAFPIVSISFDEVKEDKEDESPYNEIPERY*
Ga0115011_100330189	3300009593	Marine	MDVKDIIWAFTQKLKDVFPIVSISFDEVKDDKEDNSDYNEIPKRY*
Ga0115011_101855322	3300009593	Marine	MDVKNIVWAFTHKLKDAFPIVSIDFTEVKDVEDRKPEYTDIPERY*
Ga0115011_101908851	3300009593	Marine	LMKQYKFTVVVRSPMDVKNIVWAFTHKLKDVFPIVSIDFTEVKDVDKSDYTNIPKRY*
Ga0115011_103825715	3300009593	Marine	VKDIIWAFTQKLKDIFPIVSIDFTEVKDVDKSDYTNIPERY*
Ga0115011_107636951	3300009593	Marine	CILTMKQYKFTVVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY*
Ga0115011_108940771	3300009593	Marine	VVVRSSMDIKDIVWAFTHKLKDAFTVVSLDFSEVKDYNKIPERY*
Ga0115011_112272661	3300009593	Marine	IVVRSPMDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVKDTKPEYTDIPERY*
Ga0115104_101885807	3300009677	Marine	MKQYKFTVVVRSPLDIKDIVWAFTNKLKDAFPIVSIAFDEMKIDKNNMYEDIPERY*
Ga0115104_103183736	3300009677	Marine	MKQYKFTVVVQSPLDVKDLVWAFANKLKDVFPILSITFEEVNDTEYKDIPKRY*
Ga0115105_100054351	3300009679	Marine	NEYKFTVVVRSSMDIKDIVWAFTHKLKDAFSVVSLDFTEVKDYNKIPERY*
Ga0115105_100367051	3300009679	Marine	MDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVKDTKPEYTDIPERY*
Ga0115105_100420456	3300009679	Marine	MDVKNIVWAFTNKLKDAFPIVSIDFTEVKDVEDRKPEYTDIPERY*
Ga0115105_101034233	3300009679	Marine	MKQYKFTVVVQSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY*
Ga0115105_102215907	3300009679	Marine	MKQYKFTVVVRSPMDVKNIVWAFTHKLKDVFPIVSISFDEVKVDKEDDSDYNEIPERF*
Ga0115105_102222041	3300009679	Marine	MDVKNIVWAFTHKLKDAFPIVSIDFTEVKDVEDRKPDYTNIPERY*
Ga0115105_105554883	3300009679	Marine	AFTHKLKDAFPIISISFDEEEIDKKDNSDYTKIPERY*
Ga0115105_108604971	3300009679	Marine	KNILWAFTHKLKDAFPIVSISFDEIKDDTKDQSPYDDIPKRY*
Ga0115105_109669085	3300009679	Marine	MKQYKFTVVVQSPLDVKDLVWAFANKLKDVFPILSITFEEVKDTEYKDIPKRY*
Ga0115105_109688103	3300009679	Marine	CILMKQYKFTVVVRSPLDIKDIVWAFTHKLKDAFPIVSISFDEIKDDYKDIPERY*
Ga0115105_111198704	3300009679	Marine	MKQYKFTVVVKTSMDVKNIVWAFAHKLKDAFPIVSIDFTEVKKDDEYKDIPERY*
Ga0115105_111616533	3300009679	Marine	MNNFKQYKFTVVVRSPLDIKDIVWAFTNKLKDAFPIVSIAFDEIKVDVKEDEYKDIPERY
Ga0115105_112039422	3300009679	Marine	MKQYKFTIVVRSPMDVKDIIWSFTQKLKDVFPIVSIDFTEVKDVEDTKPDYTNIPERY*
Ga0115105_112230514	3300009679	Marine	MKQYKFTVVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY*
Ga0115012_101365201	3300009790	Marine	IGVRSAMDVKDIIWAFTQKLKDVFPIVSISFDEVKDDKEDNSDYNEIPKRY*
Ga0115012_103264852	3300009790	Marine	MDVKDIVWAFTQKLKDVFPIVSISFDEVKDDKEDDSNYNEIPKRY*
Ga0115012_104824414	3300009790	Marine	MDIKNIVWAFTHKLKDAFPIVSITFDEVKVDKEDDSDYNKIPERY*
Ga0115012_109067143	3300009790	Marine	MKQYKFTIVVRSPMDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVDKSDYTNIPERY*
Ga0115012_112353732	3300009790	Marine	MKQYKFTIVVRSPMDVKDMLWAFTHKLKDAFPIVSISFDEVKDDKKDESPYNEIPKRY*
Ga0115012_113680631	3300009790	Marine	VVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY*
Ga0115012_115933182	3300009790	Marine	MKQYKFTIVVRSPLDVKDIIWAFTHKLKDVFPIVSVDFTEVKDVEDRKPEYTDIPERY*
Ga0105189_10006497	3300009794	Marine Oceanic	NSPMNIKDIVWAFTHKLKDAFPIVSITFDEIKDDTKDQSPYDDIPKRY*
Ga0105189_10092821	3300009794	Marine Oceanic	ILMKQYKFTVVVRSPMDVKNILWAFTHKLKDAFPIVSISFDEVKEDKEDESPYNEIPERY
Ga0105189_10223791	3300009794	Marine Oceanic	DIVWAFTHKLKDAFPIVSISFDEVKVDKKDESPYNEIPERY*
Ga0105189_10224064	3300009794	Marine Oceanic	FTHKLKDAFPIVSITFDEVKDDKKDESPYNEIPERY*
Ga0098043_11054791	3300010148	Marine	IVVRSPMDVKDIIWSFTQKLKDVFPIVSIDFTEVKDVDKSDYTDIPERY*
Ga0114934_103911651	3300011013	Deep Subsurface	VVVRSPLDVKDILWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY*
Ga0163180_100818352	3300012952	Seawater	MKQYKFTVVVNSPMNIKDILWAFTHKLKDAFPIVSISFDEVKEDKKDESPYNEIPERY*
Ga0163180_105556402	3300012952	Seawater	MKQYKFTVVVRSPLDIKDIVWAFTHKLKDAFPIVSISFDEIKDDYKDIPERY*
Ga0163180_110861293	3300012952	Seawater	MDVKDMVWAFTHKLKDAFPIVSISFDEIKDDYKNIPERY*
Ga0163180_112507981	3300012952	Seawater	MKQYKFTIVVRSPMHVEDMLWAFTHKLKDAFPIVSISFDEIKDDYKD
Ga0163180_114926721	3300012952	Seawater	IVVRSPLDVKDMVWAFTHKLKDAFPIVSISFDEIKDDYKDIPERY*
Ga0163179_100730434	3300012953	Seawater	MKQYKFTVVVQSPLDVKDLVWAFANKLKDVFPILSITFEEVNDAKYKDIPKRY*
Ga0163179_102565235	3300012953	Seawater	MKQYKFTVVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDEYKDIPERY*
Ga0163179_105119191	3300012953	Seawater	MKQYKFTIVVRSPLDVKDMVWAFTHKLKDAFPIVSISFDE
Ga0163179_108873611	3300012953	Seawater	MDVKNIVWAFTHKLKDAFPIVSISFDEIKDDYKDIPERY*
Ga0163179_116488893	3300012953	Seawater	MKQYKFTVVVRSPLDIKDIVWAFTHKLKDAFPIVSISFDEIKD
Ga0163179_120557641	3300012953	Seawater	IVVRSPMDVEDMLWAFTHKLKDAFPIVSISFDEVKVNKKEDSDYNEIPERY*
Ga0181383_10873651	3300017720	Seawater	MKQYKFTIVVRSPLDVKDIVWAFTHKLKDAFPIVSVDFNEVKDIEDRKPEYTD
Ga0181383_11442193	3300017720	Seawater	RKQTMKQYKFTIVVRSPMDVKDIIWSFTQKLKDVFPIVSIDFTEVKDVEDTKPDYTNIPERY
Ga0181417_10880363	3300017730	Seawater	MKQYKFTIVVRSPMDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVKDTKPEYTDIPERY
Ga0181417_11743981	3300017730	Seawater	MKQYKFTVVVRTPMDVKNIVWAFTHKLKDAFPIVSISFDEV
Ga0181427_11497691	3300017745	Seawater	SSMDIKDIVWAFTHKLKDAFSVVSLDFTEVKDYNKIPERY
Ga0181427_11753381	3300017745	Seawater	SPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY
Ga0181405_11234064	3300017750	Seawater	MKQYKFTVVVKTSMDVKNIVWAFAHKLKDAFPIVSIDFTEVKKDDEYKDIPER
Ga0181407_11170581	3300017753	Seawater	KFTIVVRSPMDVKDIIWSFTQKLKDVFPIVSIDFTEVKDVDKSDYTNIPERY
Ga0181420_11644143	3300017757	Seawater	KDIIWAFTQKLKDIFPIVSIDFTEVKDVKDTKPEYTDIPERY
Ga0181414_10660262	3300017759	Seawater	MKQYKFTVVVQSPLDVKDILWAFTNKLKDVFPIVSITFDEIKDDDYKDIPERY
Ga0181414_11443901	3300017759	Seawater	KDIIWAFTQKLKDVFPIVSIDFTEVKDGKETKPKYTEIPERY
Ga0181408_11310371	3300017760	Seawater	TPMDVKDIIWAFTHKLKDVFPIVSISFDEEEIDKKDNSDYTKIPERY
Ga0181406_10182852	3300017767	Seawater	MKQYKFTIVVRSPMDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVKDTKPDYTDIPERY
Ga0187220_10757315	3300017768	Seawater	MDVKNIVWAFTHKLKDAFPIISISFDEEEIDKKDNSDYTKIPERY
Ga0181425_10258324	3300017771	Seawater	MKQYKFTVVVQSPLDVKDLVWAFANKLKDVFPILSITFEEVNDTEYKDIPKRY
Ga0181425_11917803	3300017771	Seawater	VVRSPMDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVKDTKPEYTDIPERY
Ga0181395_11765081	3300017779	Seawater	SIMKQYKFTVVLRSPMDVKNIVWAFTHKLKDAFPIISISFDEEEIDKKDNSDYTKIPERY
Ga0211587_102792403	3300020411	Marine	MKQYKFTVVVNSPMNIKDIVWAFTHKLKDAFPIVSISFDEVKEDKKDESPYNEIPERY
Ga0211653_100939265	3300020421	Marine	MKQYKFTVVVRSPMDVKNIVWAFTHKLKDVFPIVSIDFTEVKDVDKDYTNIPERY
Ga0211653_102028451	3300020421	Marine	MKQYRFTIGVRSAMDVKDIIWAFTQKLKDVFPIVSISFDEVKDDKEDNSGYNEIPKRY
Ga0211708_103304681	3300020436	Marine	FTVVVNSPMNIKDILWAFTHKLKDAFPIVSISFDEVKEDKEDESPYNEIPERY
Ga0211564_101480955	3300020445	Marine	MKQYKFTIVVRSPLDVKDIIWAFTQKLKDVFPIVSIDFTEVKDGKETKPKYTEIPERY
Ga0211564_103556631	3300020445	Marine	TQKLKDVFPIVSISFDEVKDDKEDDSDYTNIPERY
Ga0211643_101703186	3300020457	Marine	VNSPMNIKDIVWAFTHKLKDAFPIVSITFDEVKDDKKDESPYNEIPERY
Ga0211643_102883492	3300020457	Marine	MKQYKFTIVVRSPMDVKDMVWAFTNKLKDAFPIVSISFDEVKDDKKDDSDYTGIPERY
Ga0211514_103889661	3300020459	Marine	LMKQYKFTIVVRSPLDVKDMVWAFTHKLKDAFPIVSISFDEVKDDKKDESPYNEIPKRY
Ga0211514_104877702	3300020459	Marine	MKQYKFTIVVRSPLDVKDMVWAFTHKLKDAFPIVSISFDEIKDDYKDIPERY
Ga0211614_100498292	3300020471	Marine	MKQYKFTVVVRSPLDIKDIVWAFTHKLKDAFPIVSITFDEVKDDKKDESPYNEIPERY
Ga0211579_100451166	3300020472	Marine	MKQYKFTVVVRSPLDIKDIVWAFTHKLKDAFPIVSISFDEIKDDYKDIPERY
Ga0211579_101702481	3300020472	Marine	QYKFTVVVRSPMDVKNIVWAFTHKLKDAFPIVSIDFTEVKDVEDRKPDYTNIPERY
Ga0211579_102136141	3300020472	Marine	MKQYKFTIVVRSPLDVKDLVWAFTHKLKDAFPIVSISFDEVSDR
Ga0211579_102919183	3300020472	Marine	MKEYKFTVVVRSSMDIKDIVWAFTHKLKDAFTVVSLDFSEVKDYNKIPERY
Ga0211579_103270054	3300020472	Marine	MKQYKFTVVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY
Ga0211579_105352511	3300020472	Marine	MKQYKFTVVIRTPMDVKDIVWAFTHKLKDAFPIVSVDFTEVKDVEDRKPEYKDIPERY
Ga0208158_10026558	3300025110	Marine	MKQYKFTIVVRSPMDVKDIIWSFTQKLKDVFPIVSIDFTEVKDVDKSDYTDIPERY
Ga0208158_10099136	3300025110	Marine	MKQYKFTVVVRTPMDVKNIVWAFTHKLKDAFPIVSIDFTEVKDVEDRKPEYTDIPERY
Ga0208158_10280621	3300025110	Marine	VVVRSPLDIKDIVWAFTHKLKDAFPIVSISFDEVKDDKKDESPYNEIPKRY
Ga0208158_10283985	3300025110	Marine	MDVKDMVWAFTNKLKDAFPIVSISFDEVKDDKKEDSDYTNIPERY
Ga0208158_10525245	3300025110	Marine	YKFTVVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDDYKDIPERY
Ga0208158_10561265	3300025110	Marine	VVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDDEYKDIPERY
Ga0208158_11015782	3300025110	Marine	MKQYKFTIVVRSPMDVKDMVWAFSNKLKDVFPIVSISFDEVKDDKKDESPYNEIPKRY
Ga0208158_11168343	3300025110	Marine	VVVRSSMDIKDIVWAFTHKLKDAFTVVSLDFSEVKDYNKIPERY
Ga0208815_10020611	3300026134	Marine Oceanic	NSPMNIKDIVWAFTHKLKDAFPIVSITFDEIKDDTKDQSPYDDIPKRY
Ga0208815_10180751	3300026134	Marine Oceanic	MKQYKFTVVVNSPMNIKDILWAFTHKLKDAFPIVSISFDEVKEDKEDESPYNEIPERY
Ga0208815_10186101	3300026134	Marine Oceanic	DILWAFTHKLKDAFPIVSITFDEVKDDKKDESPYNEIPERY
Ga0208815_10264291	3300026134	Marine Oceanic	VVNSPMNIKDILWAFTHKLKDAFPIVSISFDEVKEDKEDESPYNEIPERY
Ga0209404_100420417	3300027906	Marine	MKQYRFTIGVRSAMDVKDIIWAFTQKLKDVFPIVSISFDEVKDDKEDNSDYNEIPKRY
Ga0209404_100814541	3300027906	Marine	MKQYKFTIVVRSPMDVKDIIWAFTQKLKDIFPIVSIDFTEVKDVDKSDYTNIPER
Ga0209404_102611975	3300027906	Marine	DVKDIIWAFTQKLKDIFPIVSIDFTEVKDVDKSDYTNIPERY
Ga0209404_106465153	3300027906	Marine	MKQYKFTIVVRSPMDVKNIVWAFTHKLKDAFPIVSIDFTEVKDVEDRKPEYTDIPERY
Ga0209404_107984393	3300027906	Marine	MKQYKFTVVVRSPLDVKDLVWAFTNKLKDVFPIVSITFDEIKDD
Ga0209404_109837173	3300027906	Marine	VKDLVWAFTNKLKDVFPIVSITFDEIKDDYKDIPERY
Ga0183755_10542501	3300029448	Marine	VVVNSPMNIKDIVWAFTHKLKDVFPIVSISFDEVKDDKKDESPYNEIPERY
Ga0310344_107607401	3300032006	Seawater	SPMNIKDILWAFTHKLKDAFPIVSILFDEMKEDKKDESPYEEIPERY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081151

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences