Metagenome / Metatranscriptome Family F081130

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081130
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	84 residues
Representative Sequence	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT
Number of Associated Samples	69
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.68 %
% of genes near scaffold ends (potentially truncated)	31.58 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.123 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (73.684 % of family members)
Environment Ontology (ENVO)	Unclassified (71.930 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.48% β-sheet: 9.52% Coil/Unstructured: 25.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00578	AhpC-TSA	41.23
PF03793	PASTA	35.09
PF01523	PmbA_TldD	2.63
PF13181	TPR_8	0.88
PF13525	YfiO	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	2.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.09 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	56.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.89 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.02 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.02 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10095474	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300002917\|JGI25616J43925_10070731	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300002917\|JGI25616J43925_10310932	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300002917\|JGI25616J43925_10370696	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005174\|Ga0066680_10034026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2901	Open in IMG/M
3300005176\|Ga0066679_10425474	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005446\|Ga0066686_10201257	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300005447\|Ga0066689_10085515	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300005553\|Ga0066695_10530393	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005554\|Ga0066661_10408135	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005554\|Ga0066661_10854136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005555\|Ga0066692_10124602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1558	Open in IMG/M
3300005557\|Ga0066704_10517003	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005561\|Ga0066699_10271114	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005586\|Ga0066691_10069534	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300006796\|Ga0066665_10032267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3450	Open in IMG/M
3300007255\|Ga0099791_10008980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4145	Open in IMG/M
3300009012\|Ga0066710_101783942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300009038\|Ga0099829_10215404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1558	Open in IMG/M
3300009038\|Ga0099829_10652260	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300009038\|Ga0099829_10658227	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300009038\|Ga0099829_10752107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300009088\|Ga0099830_10389300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1126	Open in IMG/M
3300009090\|Ga0099827_10388039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300009090\|Ga0099827_10574934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300009090\|Ga0099827_11043677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300009143\|Ga0099792_10112684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300009143\|Ga0099792_11267078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010304\|Ga0134088_10155227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300011269\|Ga0137392_10096517	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300011269\|Ga0137392_10403008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1135	Open in IMG/M
3300011269\|Ga0137392_10583896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300011269\|Ga0137392_11504153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300011270\|Ga0137391_10477891	All Organisms → cellular organisms → Bacteria → Acidobacteria	1057	Open in IMG/M
3300011270\|Ga0137391_11388200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300011270\|Ga0137391_11516632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300011271\|Ga0137393_10422308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1142	Open in IMG/M
3300011271\|Ga0137393_11793980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012096\|Ga0137389_10263090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300012189\|Ga0137388_10065531	All Organisms → cellular organisms → Bacteria → Acidobacteria	3006	Open in IMG/M
3300012189\|Ga0137388_11983880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012199\|Ga0137383_11102805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012199\|Ga0137383_11246953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012199\|Ga0137383_11308018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012201\|Ga0137365_10262507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300012201\|Ga0137365_10733635	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300012202\|Ga0137363_10033355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3577	Open in IMG/M
3300012202\|Ga0137363_10241507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1465	Open in IMG/M
3300012203\|Ga0137399_11347542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012205\|Ga0137362_10619962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300012205\|Ga0137362_11666651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300012205\|Ga0137362_11669908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300012206\|Ga0137380_10698600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300012206\|Ga0137380_10771064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300012206\|Ga0137380_11389721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012207\|Ga0137381_11732778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012209\|Ga0137379_10651678	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300012209\|Ga0137379_10814886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300012210\|Ga0137378_11054671	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300012210\|Ga0137378_11615312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012211\|Ga0137377_11490503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300012211\|Ga0137377_11670234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300012211\|Ga0137377_11778525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012211\|Ga0137377_11875037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012349\|Ga0137387_11184721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012351\|Ga0137386_10783375	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300012354\|Ga0137366_10253517	All Organisms → cellular organisms → Bacteria → Acidobacteria	1303	Open in IMG/M
3300012359\|Ga0137385_10378883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300012359\|Ga0137385_11287325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012361\|Ga0137360_10176950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300012361\|Ga0137360_10259459	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300012363\|Ga0137390_10016353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6749	Open in IMG/M
3300012363\|Ga0137390_11891594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012582\|Ga0137358_10178147	All Organisms → cellular organisms → Bacteria → Acidobacteria	1450	Open in IMG/M
3300012582\|Ga0137358_10610610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300012683\|Ga0137398_10039304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2741	Open in IMG/M
3300012683\|Ga0137398_10126226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300012683\|Ga0137398_10138438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1570	Open in IMG/M
3300012683\|Ga0137398_10382489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300012923\|Ga0137359_10983094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300012924\|Ga0137413_10036878	All Organisms → cellular organisms → Bacteria → Acidobacteria	2737	Open in IMG/M
3300012925\|Ga0137419_10782598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300012929\|Ga0137404_11496633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012976\|Ga0134076_10067587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1375	Open in IMG/M
3300015242\|Ga0137412_10968462	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300017656\|Ga0134112_10047802	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300018431\|Ga0066655_10290785	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300018468\|Ga0066662_11316974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300019789\|Ga0137408_1395849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300020170\|Ga0179594_10216828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300020170\|Ga0179594_10295112	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300020199\|Ga0179592_10023363	All Organisms → cellular organisms → Bacteria → Acidobacteria	2762	Open in IMG/M
3300020199\|Ga0179592_10076924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1529	Open in IMG/M
3300020199\|Ga0179592_10153972	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300021086\|Ga0179596_10068523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1532	Open in IMG/M
3300021086\|Ga0179596_10240551	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300021307\|Ga0179585_1061412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300026320\|Ga0209131_1123541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300026328\|Ga0209802_1124029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300026333\|Ga0209158_1273532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300026542\|Ga0209805_1358808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300026551\|Ga0209648_10003397	All Organisms → cellular organisms → Bacteria	13349	Open in IMG/M
3300026551\|Ga0209648_10182139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624	Open in IMG/M
3300026551\|Ga0209648_10844801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026557\|Ga0179587_10290705	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300026557\|Ga0179587_10410704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300026557\|Ga0179587_10487057	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300027655\|Ga0209388_1120548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300027846\|Ga0209180_10000235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24633	Open in IMG/M
3300027862\|Ga0209701_10624428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300027903\|Ga0209488_10570385	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300027903\|Ga0209488_10814211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300031962\|Ga0307479_10554344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	76.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	73.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_100954742	3300002914	Grasslands Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGHQTDNDGQEKIEGDVLTKTAHQS*
JGI25616J43925_100707312	3300002917	Grasslands Soil	VALLKAPTKQKTTSIQVRLEESVRVSLTRYSQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGSKEQNEEAALAKAASQT*
JGI25616J43925_103109321	3300002917	Grasslands Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT*
JGI25616J43925_103706961	3300002917	Grasslands Soil	VALLKAPTKQKTITLPVRLDGEVRVMLDRYAQFIEANPSYVVSEALKLLFKRDQEFKRWLGQNAKTGGQEQNDGAALAKAASQT*
Ga0066680_100340263	3300005174	Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIGGDVLTKTAHQS*
Ga0066679_104254742	3300005176	Soil	MERGTTKSSDETKTTTLQIRLEDDVRTALNRYAQFLDANPCYVVSEALKLLFKRDQEFNRWLSQHKKNDGQDQEAVLTKAACQM*
Ga0066686_102012572	3300005446	Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKTDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS*
Ga0066689_100855152	3300005447	Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS*
Ga0066695_105303931	3300005553	Soil	VALLKAPTKQKTTSVQVRLEEGVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKAGSKEQNEEAALAKAASQT*
Ga0066661_104081352	3300005554	Soil	MALLKAPTKQKSIAIQVRLEEEVRVTLNKYAQFIEAHPSYVVSEALKMLFKRDQEFKRWLGQHTKTAGQEQNEGTQFAKAASQT*
Ga0066661_108541361	3300005554	Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT*
Ga0066692_101246022	3300005555	Soil	MALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVSEALKLLFKRDQEFKRWLRQHTKNEGQEQNQEAALAKAASQT*
Ga0066704_105170031	3300005557	Soil	KAPTKQKTTTLQIRLEDDVRVKLDKYAEFIHANSSYVVSEALKLLFKRDQEFKRWLFQFAKSGGQKQNEDGGLAKAASQT*
Ga0066699_102711142	3300005561	Soil	VALLKAPTKQKTTTLQIRLEDDVRTALSKYAQFLDANPSYVVSETLKLLLKRDQEFKRWLSQHTKNDGREQNDEAALTKAASQA*
Ga0066691_100695344	3300005586	Soil	VALVKAPTKQKTTTLQIRLEDDVRVKLDKYAEFIHANSSYVVSEALKLLFKRDQEFKRWLFQFAKSGGQKQNEDGGLAKAASQT*
Ga0066665_100322673	3300006796	Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKTDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS*
Ga0099791_100089802	3300007255	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGPHAKTGGQEQNEEAALAKAASQT*
Ga0066710_1017839422	3300009012	Grasslands Soil	MALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVSEALKLLFKRDQEFKRWLRQHTKNEGQEHNQEAALAKAASQT
Ga0099829_102154041	3300009038	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKSGGQNEEAALAKAGSQT*
Ga0099829_106522601	3300009038	Vadose Zone Soil	WNEGGWTLALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0099829_106582271	3300009038	Vadose Zone Soil	EGGWTLALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0099829_107521072	3300009038	Vadose Zone Soil	VALVKAPTKQKTTTLQIRLEDDVRVKLDKYAEFIDANSSYVVSEALKLLFKRDQEFKRWLGQNAKTGGQEQNDGVALAKAASQT*
Ga0099830_103893002	3300009088	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEAVKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT*
Ga0099827_103880392	3300009090	Vadose Zone Soil	VRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRHWLGHQTDNDGQEKIKGDVLTKTAHQS*
Ga0099827_105749341	3300009090	Vadose Zone Soil	VALAKAPTKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYVVGEALKLLFKRDQEFRRWLGHQTDNDGQEKIEGDVLTKTAHQS*
Ga0099827_110436771	3300009090	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNDDDQEKIEGNVLTKTAHQS*
Ga0099792_101126842	3300009143	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHSKTGGQEQKEEAALAKAASQT*
Ga0099792_112670782	3300009143	Vadose Zone Soil	EGGWTVALVKAPTKQKTTTLQIRLEDDVRVKLDKYAEFIDANSSYVVSEALKLLFKRDQEFKRWLGQNAKTGGQEQNDGVTLAKAASQT*
Ga0134088_101552273	3300010304	Grasslands Soil	IIRNPALLTKQWNEGGWTLALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS*
Ga0137392_100965174	3300011269	Vadose Zone Soil	VALLKAPTKQKTTSVQVRLEEGVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKSGGQVQNEEAALAKAASQT*
Ga0137392_104030082	3300011269	Vadose Zone Soil	VALVKAPTKQKTTTLQIRLEDDVRVKLDKYAEFIDANSSYVVSEALKLLFKRDQEFKRWLGQNAKTGGQEQNDGVTLAKAASQT*
Ga0137392_105838962	3300011269	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYVVGEALKLLFKRDQEFRRWLGHQTDNDGQEKIEGDVLTKTAHQS*
Ga0137392_115041532	3300011269	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNND
Ga0137391_104778912	3300011270	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKSGGQNEEAALAKAASQT*
Ga0137391_113882002	3300011270	Vadose Zone Soil	LVKAPTRQKTTSIQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNDDDQEKIEGDVLTKTAHQS*
Ga0137391_115166322	3300011270	Vadose Zone Soil	WTVALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGHQTDNDGQEKIEGDVLTKTAHQS*
Ga0137393_104223082	3300011271	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT*
Ga0137393_117939802	3300011271	Vadose Zone Soil	ALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0137389_102630903	3300012096	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0137388_100655312	3300012189	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0137388_119838802	3300012189	Vadose Zone Soil	VALVKAPTKQKTTTLQIRLEDDVRVKLDKYAEFIDANSSYVVSEALKLLFKRDQEFKRWLGQNAKTGGQEQNDGVTLA
Ga0137383_111028051	3300012199	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGNVLTKTAHQ
Ga0137383_112469532	3300012199	Vadose Zone Soil	LVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNEDGQEKIEEDVLTKTAHQS*
Ga0137383_113080182	3300012199	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYIVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0137365_102625073	3300012201	Vadose Zone Soil	VRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNEDGQEKIEGDVLTKTAHQS*
Ga0137365_107336351	3300012201	Vadose Zone Soil	VRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0137363_100333554	3300012202	Vadose Zone Soil	VALLKAPTKQKTTALQIRLEDNVRTTLNKYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQGQNDEGALAKAASQM*
Ga0137363_102415073	3300012202	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNYDDQEKIEGNVLTKTAHQS*
Ga0137399_113475422	3300012203	Vadose Zone Soil	MALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQEQNDEGALAKAASQM*
Ga0137362_106199621	3300012205	Vadose Zone Soil	WNEGGWTVALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYVAGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGDVLTKTAHQS*
Ga0137362_116666511	3300012205	Vadose Zone Soil	GGWTVALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS*
Ga0137362_116699082	3300012205	Vadose Zone Soil	ALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT*
Ga0137380_106986002	3300012206	Vadose Zone Soil	MDVALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGSVLTKTAHQS*
Ga0137380_107710642	3300012206	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYIVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0137380_113897211	3300012206	Vadose Zone Soil	TKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0137381_117327781	3300012207	Vadose Zone Soil	TKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYIVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0137379_106516781	3300012209	Vadose Zone Soil	TVALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKAAHQS*
Ga0137379_108148862	3300012209	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0137378_110546712	3300012210	Vadose Zone Soil	VKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKAAHQS*
Ga0137378_116153122	3300012210	Vadose Zone Soil	QWNEGGWTVALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFINASPSYIVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0137377_114905032	3300012211	Vadose Zone Soil	LREGGWTVALLKAPTKQKTTSVQVRLEEGVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKAGSKEQNDGVALAKAASQT*
Ga0137377_116702341	3300012211	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVSEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGNVLTKTAHQS*
Ga0137377_117785252	3300012211	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGNVLTKTAHQ
Ga0137377_118750372	3300012211	Vadose Zone Soil	PTKQKTTSLQVRLEEDVRLNLNKYAQFINASPSYIVGEALKLLFKRDQEFRRWLGQHTNDDGQEKIEGNVLTKTAHQS*
Ga0137387_111847211	3300012349	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGHQTDNDGQEKIEGDVLTKTAHQS*
Ga0137386_107833751	3300012351	Vadose Zone Soil	LVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS*
Ga0137366_102535172	3300012354	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRHWLGQHTNNDGQEKIEGNVLTKTAHQS*
Ga0137385_103788832	3300012359	Vadose Zone Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKAAHQS*
Ga0137385_112873252	3300012359	Vadose Zone Soil	VIQLDADNPAHENRLREGGWTVALLRAPTKQKTTSVQVRLEEGVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKAGSKEQNEEAALAKAASQT*
Ga0137360_101769501	3300012361	Vadose Zone Soil	TVALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT*
Ga0137360_102594592	3300012361	Vadose Zone Soil	VALLKAPTKQKTTALQIRLEDNVRTTLNKYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQEQNDEGALAKAASQM*
Ga0137390_100163536	3300012363	Vadose Zone Soil	VALLKAPTKQKTTTLQIRLEEDVRGTLNRYAQFIDANPSYVVSEALKLLLKRDQEFKKWLSQQTKGDGRELNEEEGLTKAASQT*
Ga0137390_118915942	3300012363	Vadose Zone Soil	LKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIDASPSYVVSEALKLLFKKDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT*
Ga0137358_101781473	3300012582	Vadose Zone Soil	VALLKAPTKQKTTALQIRLEDNVRTTLNRYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQEQNDEGALAKAASQM*
Ga0137358_106106102	3300012582	Vadose Zone Soil	MALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVNEALKLLFKRDQEFKRWLRQHTKNEGQEQNQEAALAKAASQT*
Ga0137398_100393044	3300012683	Vadose Zone Soil	VALLKAPTKQKTTSIQVRLEEGVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAMAGSKEQNEEAALAKAASQT*
Ga0137398_101262264	3300012683	Vadose Zone Soil	APTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT*
Ga0137398_101384382	3300012683	Vadose Zone Soil	VALLKAPTKQKTTALQIRLEDNVRTTLNKYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQEQNDEEALAKAASQM*
Ga0137398_103824893	3300012683	Vadose Zone Soil	MALLKAPTKQKSIAIQVRLEEDVRVMLNKYAQFIEAHPSYVVSEALKMLFKRDQEFRRWLGQHNKAEGQNEGSGIVKAAAQS*
Ga0137359_109830942	3300012923	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVGEALKLLFKRDQEFKQWLGQHAKNAGQEQKEEAALAKAASQT*
Ga0137413_100368783	3300012924	Vadose Zone Soil	VALLKTPTKQKTTSLQVRLEEDVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHSKTGGQEQKEEAALAKAASQT*
Ga0137419_107825982	3300012925	Vadose Zone Soil	VALLKAPTKQKTVSLQVRLEEDVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHSKTGGQEQKEEAALAKAASQT*
Ga0137404_114966332	3300012929	Vadose Zone Soil	VALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVSEALKLLFKRDQEFKRWLRQHTKNEGQEQNQEAALAKAASQ
Ga0134076_100675871	3300012976	Grasslands Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKTDQEFRRWLGQHTNNDGQEKIEED
Ga0137414_11092693	3300015051	Vadose Zone Soil	VRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT*
Ga0137412_109684622	3300015242	Vadose Zone Soil	KQKSIAIQVRLEEDVRVMLNKYAQFIEAHPSYVVSEALKMLFKRDQEFRRWLGQHNKAEGQNEGSGIAKAAAQS*
Ga0134112_100478025	3300017656	Grasslands Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKTDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS
Ga0066655_102907853	3300018431	Grasslands Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS
Ga0066662_113169741	3300018468	Grasslands Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVVEALKLLFKRDQEFRRWLGQHTNNDGQEKIEEDVLTKTAHQS
Ga0137408_13958493	3300019789	Vadose Zone Soil	VALLKAPTKQKTTALQIRLEDNVRTTLNKYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQEQNDEGALAKAASQM
Ga0179594_102168282	3300020170	Vadose Zone Soil	MALLKAPTKQKTTALQIRLEDNVRTTLNKYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQEQNDEGALAKAASQM
Ga0179594_102951121	3300020170	Vadose Zone Soil	ALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT
Ga0179592_100233632	3300020199	Vadose Zone Soil	VALLKAPTKQKTVSLQVRLEEDVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHSKTGGQEQKEEAALAKAASQT
Ga0179592_100769242	3300020199	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT
Ga0179592_101539722	3300020199	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT
Ga0179596_100685231	3300021086	Vadose Zone Soil	VALLKAPTKQKTITLPVRLDGEVRVMLDRYAQFIEANPSYVVSEALKLLFKRDQEFKRWLGQNAKTGGQEQNDGVALAKAASQT
Ga0179596_102405511	3300021086	Vadose Zone Soil	VALLKAPTKHKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT
Ga0179585_10614121	3300021307	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHSKTGGQEQKEEAALAKAASQT
Ga0209131_11235412	3300026320	Grasslands Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGPHAKTGGQEQNEEAALAKAASQT
Ga0209802_11240291	3300026328	Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLKKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIGGDVLTKTAHQS
Ga0209158_12735322	3300026333	Soil	MALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVSEALKLLFKRDQEFKRWLRQHTKNEGQEQNQEAALAKAASQT
Ga0209805_13588081	3300026542	Soil	VALLKAPTKQKTTTLQIRLEDDVRTALSKYAQFLDANPSYVVSETLKLLLKRDQEFKRWLSQHTKNDGREQNDEAALTKAASQA
Ga0209648_100033973	3300026551	Grasslands Soil	VALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGHQTDNDGQEKIEGDVLTKTAHQS
Ga0209648_101821394	3300026551	Grasslands Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASSSYVVSEALKLLFKRDQEFKRWLGQHKTGGLDQNEEAALAKAASQT
Ga0209648_108448011	3300026551	Grasslands Soil	VALLKAPTKQKTTSVQVRLEEGVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKAGSKEQNEE
Ga0179587_102907053	3300026557	Vadose Zone Soil	MALLKAPTKQKSIAIQVRLEEDVRVMLNKYAQFIETHPSYVVSEELKMLFKRDQEFKRWLGQHNKTEGQNEGSGIAKAATQT
Ga0179587_104107042	3300026557	Vadose Zone Soil	MALLKAPTKQKTTSVQIRLEDDVRSALNKYAHFIEANPSYVVSEALKLLFKRDQEFKRWLRQHTKNEGQERNQEAALAKAASQT
Ga0179587_104870571	3300026557	Vadose Zone Soil	LCEGGWTVALLKAPTKQKTTSLQVRLEEDVRVSLNKYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKNAGQEQKEEAALAKAASQT
Ga0209388_11205482	3300027655	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGPHAKTGGQEQNEEAALAKAASQT
Ga0209180_1000023511	3300027846	Vadose Zone Soil	LALVKAPTKQKTTSLQVRLEEDVRLNLNKYAQFIDASPSYVVGEALKLLFKRDQEFRRWLGQHTNNDGQEKIEGDVLTKTAHQS
Ga0209701_106244281	3300027862	Vadose Zone Soil	VALLKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIDASPSYVVSEALKLLFKKDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT
Ga0209488_105703851	3300027903	Vadose Zone Soil	LKAPTKQKTTSLQVRLEEDVRVSLTRYAQFIDASPSYVVSEALKLLFKRDQEFKRWLGQHAKTGGQEQNEEAALAKAASQT
Ga0209488_108142111	3300027903	Vadose Zone Soil	MALLKAPTKQKTTALQIRLEDNVRTTLNKYAQFLEANPSYVVSEALKLLFKRDQEFKRWLSQHTKNEGQGQNDEGALAKAASQM
Ga0307479_105543442	3300031962	Hardwood Forest Soil	MCEGGWTVALLKAPTKQKTTSLQVRLEEDVRVSLNRYAQFIEASPSYVVSEALKLLFKRDQEFKRWLGQHAMSGGQNEEAALAKAASQT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081130

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences