Metagenome / Metatranscriptome Family F081119

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081119
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	114 residues
Representative Sequence	AYSQGVQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL
Number of Associated Samples	101
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.25 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.860 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.544 % of family members)
Environment Ontology (ENVO)	Unclassified (34.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.211 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.09% β-sheet: 33.86% Coil/Unstructured: 59.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF14341	PilX_N	13.16
PF07963	N_methyl	2.63
PF03575	Peptidase_S51	1.75
PF13242	Hydrolase_like	1.75
PF01326	PPDK_N	0.88
PF13432	TPR_16	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	85.96 %
Unclassified	root	N/A	6.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	85.96 %
Unclassified	root	N/A	6.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.75 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	81.58 %
Unclassified	root	N/A	6.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	81.58 %
Unclassified	root	N/A	6.14 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	81.58 %
Unclassified	root	N/A	6.14 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	81.58 %
Unclassified	root	N/A	6.14 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	81.58 %
Unclassified	root	N/A	6.14 %
unclassified Syntrophus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria)	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	81.58 %
Unclassified	root	N/A	6.14 %
Syntrophus sp. G20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. G20	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10074181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1881	Open in IMG/M
3300002120\|C687J26616_10254501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300002121\|C687J26615_10172087	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300002503\|C687J35164_10080884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	973	Open in IMG/M
3300002503\|C687J35164_10094708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	884	Open in IMG/M
3300002562\|JGI25382J37095_10260154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300004009\|Ga0055437_10069511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	985	Open in IMG/M
3300004019\|Ga0055439_10025155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1467	Open in IMG/M
3300004020\|Ga0055440_10006270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2008	Open in IMG/M
3300004024\|Ga0055436_10251484	Not Available	564	Open in IMG/M
3300004281\|Ga0066397_10118966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300005166\|Ga0066674_10506627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300005183\|Ga0068993_10300461	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300005332\|Ga0066388_107427800	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005363\|Ga0008090_15220560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	553	Open in IMG/M
3300005444\|Ga0070694_100897366	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300005556\|Ga0066707_10909551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300005764\|Ga0066903_102240515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. G20	1054	Open in IMG/M
3300005833\|Ga0074472_10803370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300006796\|Ga0066665_10562475	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300006796\|Ga0066665_11023831	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300006852\|Ga0075433_10783886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	833	Open in IMG/M
3300009038\|Ga0099829_10134934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1957	Open in IMG/M
3300009088\|Ga0099830_11638469	Not Available	536	Open in IMG/M
3300009090\|Ga0099827_10838474	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300009137\|Ga0066709_101316355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1058	Open in IMG/M
3300009147\|Ga0114129_13300610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300009162\|Ga0075423_10096584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3089	Open in IMG/M
3300010043\|Ga0126380_11432701	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300010046\|Ga0126384_10067717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2526	Open in IMG/M
3300010046\|Ga0126384_11179722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300010303\|Ga0134082_10158100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	918	Open in IMG/M
3300010358\|Ga0126370_10211050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1475	Open in IMG/M
3300010358\|Ga0126370_12109356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300010358\|Ga0126370_12147640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300010360\|Ga0126372_10025684	All Organisms → cellular organisms → Bacteria	3586	Open in IMG/M
3300010360\|Ga0126372_10600376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1056	Open in IMG/M
3300010360\|Ga0126372_13023026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300010361\|Ga0126378_10706160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1120	Open in IMG/M
3300010361\|Ga0126378_11604140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300010362\|Ga0126377_10993055	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	905	Open in IMG/M
3300010362\|Ga0126377_11990467	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300010376\|Ga0126381_100990073	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1213	Open in IMG/M
3300010376\|Ga0126381_102221016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300010376\|Ga0126381_103210473	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300010398\|Ga0126383_10108629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2498	Open in IMG/M
3300010398\|Ga0126383_12244549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300011269\|Ga0137392_10974542	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300011270\|Ga0137391_10670781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	864	Open in IMG/M
3300012096\|Ga0137389_11775298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300012202\|Ga0137363_10209083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1569	Open in IMG/M
3300012206\|Ga0137380_10607877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	956	Open in IMG/M
3300012211\|Ga0137377_10002797	All Organisms → cellular organisms → Bacteria	13145	Open in IMG/M
3300012349\|Ga0137387_10381193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1022	Open in IMG/M
3300012356\|Ga0137371_11370421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300012357\|Ga0137384_10366568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1192	Open in IMG/M
3300012359\|Ga0137385_11515128	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300012685\|Ga0137397_11338760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300012918\|Ga0137396_10032770	All Organisms → cellular organisms → Bacteria	3453	Open in IMG/M
3300012927\|Ga0137416_11870660	Not Available	549	Open in IMG/M
3300012930\|Ga0137407_10244214	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1625	Open in IMG/M
3300012931\|Ga0153915_11881189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300012944\|Ga0137410_11953610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300012948\|Ga0126375_11339797	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300012971\|Ga0126369_11985888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300014873\|Ga0180066_1104730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300014884\|Ga0180104_1200344	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300015245\|Ga0137409_10682343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300016270\|Ga0182036_11499284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300019249\|Ga0184648_1007879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300020065\|Ga0180113_1209883	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300020068\|Ga0184649_1136046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300021090\|Ga0210377_10288514	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1009	Open in IMG/M
3300025146\|Ga0209322_10352145	Not Available	583	Open in IMG/M
3300025160\|Ga0209109_10088034	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1611	Open in IMG/M
3300025289\|Ga0209002_10089540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2045	Open in IMG/M
3300025313\|Ga0209431_10991058	Not Available	595	Open in IMG/M
3300025318\|Ga0209519_10463454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300025319\|Ga0209520_10377650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300025322\|Ga0209641_10098850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2232	Open in IMG/M
3300025324\|Ga0209640_10988206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300025325\|Ga0209341_11076781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300025535\|Ga0207423_1015287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1223	Open in IMG/M
3300025538\|Ga0210132_1039860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300025560\|Ga0210108_1090345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300025560\|Ga0210108_1103031	Not Available	571	Open in IMG/M
3300025569\|Ga0210073_1026037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1175	Open in IMG/M
3300025922\|Ga0207646_10429798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1192	Open in IMG/M
3300026309\|Ga0209055_1288482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300026343\|Ga0209159_1252605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300026351\|Ga0257170_1051727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300027645\|Ga0209117_1185588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300027681\|Ga0208991_1108987	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	828	Open in IMG/M
3300027882\|Ga0209590_10968970	Not Available	532	Open in IMG/M
3300028792\|Ga0307504_10214346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300031720\|Ga0307469_10887767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	825	Open in IMG/M
3300031748\|Ga0318492_10369870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300031770\|Ga0318521_10068268	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1886	Open in IMG/M
3300031820\|Ga0307473_10211963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1159	Open in IMG/M
3300031833\|Ga0310917_10997258	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300031941\|Ga0310912_11457948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300031947\|Ga0310909_10247618	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1488	Open in IMG/M
3300032008\|Ga0318562_10040666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2520	Open in IMG/M
3300032180\|Ga0307471_100780390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1122	Open in IMG/M
3300032205\|Ga0307472_100331428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1240	Open in IMG/M
3300032954\|Ga0335083_10550795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	958	Open in IMG/M
3300033004\|Ga0335084_10536412	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1200	Open in IMG/M
3300033290\|Ga0318519_10012803	All Organisms → cellular organisms → Bacteria	3511	Open in IMG/M
3300033407\|Ga0214472_11463322	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300033500\|Ga0326730_1080923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300034090\|Ga0326723_0016384	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2991	Open in IMG/M
3300034125\|Ga0370484_0088738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300034165\|Ga0364942_0248334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300034177\|Ga0364932_0016688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.37%
Host-Associated	Host-Associated	2.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.58%
Aquatic	Environmental → Aquatic	15.79%
Plants	Host-Associated → Plants	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.07%
Marine	Environmental → Aquatic → Marine	8.77%
Freshwater	Environmental → Aquatic → Freshwater	4.39%
Sediment	Environmental → Aquatic → Sediment	2.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.63%
Peat	Environmental → Terrestrial → Peat	1.75%
Floodplain	Environmental → Terrestrial → Floodplain	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.40%
Loam	Environmental → Terrestrial → Soil → Loam	14.04%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.40%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.02%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	7.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.02%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	7.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.75%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.88%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100741812	3300001661	Forest Soil	AGTVITIAPPGVPVAYSQGVQVGRPKLVRFVWDSVNTIFKDAGLGAGLQPLATGVTACALTYFDANDVAIPPLGLAANLGNIRRMVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
C687J26616_102545012	3300002120	Soil	YLINTDQFSTVTVGSASGTVITIGPPGVPVAYSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDANDVVIPAVNLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL*
C687J26615_101720872	3300002121	Soil	QGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDVNDVAIPAGDLPANLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL*
C687J35164_100808841	3300002503	Soil	VGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDVNDVAIPAGDLPANLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL*
C687J35164_100947082	3300002503	Soil	VGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTASALTYFDANDVVIPAVSLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL*
JGI25382J37095_102601542	3300002562	Grasslands Soil	VALPQGVQVGRPKQIRYLWDGINTVFKDAGTGLGFQPLANGVTGFQLTYFDSNDVAIPVASLGASLDLIRRVLVTLTARSAGTDEVRSFTLTSSVRPRNL*
Ga0055437_100695112	3300004009	Natural And Restored Wetlands	MPYAQGVQVGRPKLVRFVWDNVSILLKDAGSGTGLQPLATGVTGLNLTYFDTNDVVIPPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFNLTSSVRPRNL*
Ga0055439_100251552	3300004019	Natural And Restored Wetlands	VSSVAGTTIVLASPGVPMPYAQGVQVGRPKLVRFVWDNVSILLKDAGSGTGLQPLATGVTGLNLTYFDTNDVVIPPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFNLTSSVRPRNL*
Ga0055440_100062702	3300004020	Natural And Restored Wetlands	TLTANANVNDTALTVANASGFAPGDVIYLINTDQYSTVTVGSASGTVITINSPGVPVAYSQGVQVGRPKLIRFVWDNVDTIFKDAGTGAGLQPLAAGVTGYTMTYYDSNDVVIPAGSLPGNLGNIRRLVVTLTARSAGSQEQRTFSLTSSVRPRNL*
Ga0055436_102514841	3300004024	Natural And Restored Wetlands	FKDAGTGAGLQPLAAGVTGYTMTYYDSNDVVIPAGSLPGNLGNIRRLVVTLTARSAGSQEQRTFSLTSSVRPRNL*
Ga0066397_101189662	3300004281	Tropical Forest Soil	STATVSSASGTTITLASPGVAQPYTQGIQVGRPKLVRFVWDTVSTLRKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAGNLAANLGSIRRIMVTLTTQSSSGPVDARTFTLTTSVRPRNL*
Ga0066674_105066272	3300005166	Soil	TVITIAPPGVPVAFSQGVQVGRPKLIRFVWDSVNTIFKDAGLGAGLQPLATGVTACALTYFDVNDVAIPPLSLAANLGNIRRMVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0068993_103004612	3300005183	Natural And Restored Wetlands	TDQFSTVTVSSVAGTTIVLATPGVPKPYAQGVQVGRPKPVRFVWDNVNTLLKDAGAGTGLQPLATGVTGLNLTYFDTNDVVILPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFDLTSSVRPRNL*
Ga0066388_1074278001	3300005332	Tropical Forest Soil	VQVGRPKQIRYVWDGVSTLLKDAGTGLGLQPLAAGVTGFQLTYFDTNDVAIPVASLGASLGVIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL*
Ga0008090_152205602	3300005363	Tropical Rainforest Soil	SSATGTTIVLASPGVPQAYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTNDAIIPAANLAANLGSIRRIMVTLTAQSASGPIDARTFTLTTSVRPRNL*
Ga0070694_1008973662	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AYSQGVQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0066707_109095512	3300005556	Soil	VGSAAGTVITIAPPGVPVAFSQGVQVGRPKLIRFVWDSVNTIFKDAGLGAGLQPLATGVTACALTYFDVNDVAIPPLSLAANLGNIRRMVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0066903_1022405151	3300005764	Tropical Forest Soil	VQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTNDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL*
Ga0074472_108033701	3300005833	Sediment (Intertidal)	YLINTDQFSTVIVGSAAGTVITINPPGVPVAYSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACTLTYFDLNDVTIPPISLPLNLRNIRRIVVTMTAQSNGTQEQRTFSLTSSVRPRNL*
Ga0066665_105624751	3300006796	Soil	GIDTVFKDAGTGLGFQPLATGVTGFQLTYFDTSDVAIPVASLGASLNLIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL*
Ga0066665_110238311	3300006796	Soil	GIDTVFKDAGTGLGFQPLATGVTGFQLTYFDTSDVAIPVANLGASLNLIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL*
Ga0075433_107838862	3300006852	Populus Rhizosphere	NDTTLTVANASGFRGGDVIYLINTDQYSTVTVSSATGTTITLASPGVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPVDARTFTLTTSVRPRNL*
Ga0099829_101349342	3300009038	Vadose Zone Soil	PKQIRYLWDGINTLLKDAGTGLGFQPLATGVTGFQLTYFDTNDVAIPVASLGASLNLIRRVVVTLTAQSGGTDEVRSFTLTSSVRPRNL*
Ga0099830_116384692	3300009088	Vadose Zone Soil	DAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0099827_108384742	3300009090	Vadose Zone Soil	ALPQGVQVGRPKQIRYLWDGINTLFKDAGTGLGFQPLATGVTGFQLTYFDTNDVAIPVASLGASLGIIRRVVVTLTAQSPGSSEVRSFTLTSSVRPRNL*
Ga0066709_1013163551	3300009137	Grasslands Soil	VALPQGVQVGRPKQIRYLWNGMDTVFKDAGTGLGFQPLATGVTGFQLTYFDTSDVAIPVASLGTSLSLIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL*
Ga0114129_133006101	3300009147	Populus Rhizosphere	NTNDTTLTVANASGFRGGDVIYLINTDQYSTVTVSSATGTTITLASPGVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPVDARTFTLTTSVRPRNL*
Ga0075423_100965841	3300009162	Populus Rhizosphere	NASGFRGGDVIYLINTDQYSTVTVSSATGTTITLASPGVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPVDARTFTLTTSVRPRNL*
Ga0126380_114327011	3300010043	Tropical Forest Soil	TANANTSDTTLTVADASGFRGGDVIYLINTDQYSTVTVSSATGTTIVLATPGVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANSVTGFTLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPVDARTFTLTTSVRPRNL*
Ga0126384_100677171	3300010046	Tropical Forest Soil	GVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTNDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL*
Ga0126384_111797221	3300010046	Tropical Forest Soil	NANTNDTSLTVANASGFTGGDVIYLINTDQYSTATVSSASGTTITLAFPGVAQPYTQGIQVGRPKLVRFVWDTVSTLRKDSGTGGGLQPLANGVTGFSLTYFDSNDVVIPAGSLAANLGNIRRIMVTLTTQSSSGPVDARTFTLTTSVRPRNL*
Ga0134082_101581001	3300010303	Grasslands Soil	VPVALPQGVQVGRPKQIRYLWNGIDTVFKVAGTGLGFQPLATGVTGFQFTYFDTSDVAIPVANLGASLNLIRRVVVTLTAQAAGTDEVRSFTLTSSVRPRNL*
Ga0126370_102110501	3300010358	Tropical Forest Soil	KLVRFVWDNVSTLLKDAGTGGGLQPLANGVTGFTLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPIDARTFTLTTSVRPRNL*
Ga0126370_121093562	3300010358	Tropical Forest Soil	STATVSSASGTTITLASPGVSQPYAQGIQVGRPKLVRFAWDNVSTLRKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAGNLAGNLGSIRRIMVTLTTQSSSGPVDARTFTLTTSVRPRNL*
Ga0126370_121476401	3300010358	Tropical Forest Soil	LTANANANDTALTVADASGFRAGDVIYLINADQYSTVTVSSASGTSISLAPPGAPLAYSQGVQLGRSKLIRFAWDGVGTLLKDSGEGAGLQPLASGVTGFSLTYLDGADVVIPPGSLAANLGSIRRIVVTLTTQAGGSVDSRTFNLTSSVRPRNL*
Ga0126372_100256841	3300010360	Tropical Forest Soil	NADQYSTVTVSSASGTSISLASPGAPVAYSRGVQVGRPKLIRFAWDGVSTLLKDSGEGAGLQPLASGVTGFGLTYLDGADVVIPPGSLAANLGSIRRIVVTLTTQAGGSVDSRTFNLTSSVRPRNL*
Ga0126372_106003761	3300010360	Tropical Forest Soil	QYSTVTVSSASGTTITLASPGVPQPYAQGVQVGRPKLVRFVWDNASTLLKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPTANLAANLGSIRRIMVTLTAQSSSGPVDARTFTLTTSVRPRNL*
Ga0126372_130230261	3300010360	Tropical Forest Soil	VSSASGTTITLASPGVSQPYAQGIQVGRPKLVRFAWDNVSTLRKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAGNLAANLGSIRRIMVTLTTQSSSGPVDARTFTLTTSVRPRNL*
Ga0126378_107061602	3300010361	Tropical Forest Soil	SVTGTTIVLASPGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPIDARTFTLTTSVRPRNL*
Ga0126378_116041401	3300010361	Tropical Forest Soil	TITLASPGVPQPYAQGIQVGRPKLVRFAWDNVSTLRKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAANLAANLGSIRRIMVTLTTQSSSGSVDARTFTLTTSVRPRNL*
Ga0126377_109930551	3300010362	Tropical Forest Soil	ASASGTTITLASPGVPQPYAQGIQVGRPKRVRFAWDNVSTLLKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAASLAANLGSIRRIMVTLTTQSSSGPVDARTFTLTTSVRPRNL*
Ga0126377_119904671	3300010362	Tropical Forest Soil	SSASGTTINLASPGVPRGYSQGVQVGRPRLVRFAWDNVGTLLKDAGDGTGLRPLASGVTGFSLTYFDTADVVIPPGSLAANLGSIRRIVVTLTTQSAGSVDARTFNLTSSVRPRNL*
Ga0126381_1009900731	3300010376	Tropical Forest Soil	SASGTTITLASPGVPQPYAQGIQVGRPKLVRFTWDNVSTLLKDSGTGGGLQPLANGVTGFSLTYFDTNDVVIPAANLAANLGSIRRIMVTLTTQSSNGPVDARTFTLTTSVRPRNL*
Ga0126381_1022210161	3300010376	Tropical Forest Soil	TGTTIVLASPGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTNDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL*
Ga0126381_1032104731	3300010376	Tropical Forest Soil	TGTTIVLASPGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAANLAANLGSIRRIMVTLTAQSASGPIDARTFTLTTSVRPRNL*
Ga0126383_101086293	3300010398	Tropical Forest Soil	TIVLAAPGVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANSVTGFTLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPVDARTFTLTTSVRPRNL*
Ga0126383_122445491	3300010398	Tropical Forest Soil	TGTTIVLASPGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTNDVVIPAASLAANLGSIRRIMVTLSAQSVSGPLDARTFTLTTSVRPRNL*
Ga0137392_109745421	3300011269	Vadose Zone Soil	SVSFWADLTGASTTLTANANVNDTTLNVLNASGFAAGDVVYLINTDQFSTVTVSSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACALTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137391_106707812	3300011270	Vadose Zone Soil	DNVNTLLKDAGEGAGLQPLANGVTACNLTYFDANDIVILPINLTANLGNIRRIVVTLTAQSTGNQEQRSFSLTSSVRPRNL*
Ga0137389_117752982	3300012096	Vadose Zone Soil	STVTVTSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137363_102090831	3300012202	Vadose Zone Soil	QVGRPKQIRYLWDGINTVFKDAGTGLGFQTLATGVTGFQLTYFDTSDVAIPVASLGASLNLIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL*
Ga0137380_106078771	3300012206	Vadose Zone Soil	WDNVNTMFKDAGEGGGLQPLAVGVTACTLAYFDANDIVILPVNLTANLGNIRRIVVTLTAQSTGNQEQRSFSLTSSVRPRNL*
Ga0137377_1000279715	3300012211	Vadose Zone Soil	NVNTIFKDAGLGAGLQPLATGVTACTLTYFDINDVAIPAVSLAANLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137387_103811931	3300012349	Vadose Zone Soil	SVSFWADLTGASTTLTANANVSDTTLNVLNASGFAAGDVVYLINTDQFSTVTVTSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDSVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137371_113704211	3300012356	Vadose Zone Soil	ADLTGASTTLTANANVNDTTLNVVNASGFAAGDVVYLINTDQFSTVTVTSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSTGNQEQRTFSLTSSVRPRNL*
Ga0137384_103665682	3300012357	Vadose Zone Soil	FKDAGEGAGLQPLAVGVTACNLTYLDANDIVILPVNLTANLGNIRRIVVTLTAQSTGNQEQRSFSLTSSVRPRNL*
Ga0137385_115151281	3300012359	Vadose Zone Soil	TTLTANANVSDTTLNVLNASGFAAGDVVYLINTDQFSTVTVTSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDSVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137397_113387601	3300012685	Vadose Zone Soil	NTDQFSPVTVSSAAGTVVTIGAPGVPVAYSEGVQVGRPKLIRFVWDNVNTIFKDAGLGAGLQPLATGVTACAVTYFDVNDVAIPAVNLPGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137396_100327705	3300012918	Vadose Zone Soil	FSTVTVTSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDNVNTIFKDAGLCAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRSFSLTSSVRPRNL*
Ga0137416_118706601	3300012927	Vadose Zone Soil	NTIFKDAGLGAGLQPLATGVTACALTYFDANDVAIPPLGLAANLGNIRRMVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0137407_102442142	3300012930	Vadose Zone Soil	VLNASGFAAGDVVYLINTDQFSTVTVTSAAGTVISIGAPGVPVAYSQGVQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0153915_118811891	3300012931	Freshwater Wetlands	VVNASGFTAGDTIYLINTDQFSTVTVGSASGTVIIIGAPGTPVAYSQGVQVGRPKLVRFVWDSVDTIFKDAGTGAGLQPLATGVTAFALTYFDVNDAVIPAASLPGSLGNIRRIVVTLTAQSAGSREPRAFSLTSSVRPRNL*
Ga0137410_119536101	3300012944	Vadose Zone Soil	PPGVPVAYSQGVQVGRPKLVRFVWDSVNTIFKDAGLGAGLQPLATGVTACALTYFDANDVAIPPLGLAANLGNIRRMVVTLTAQSAGNQEQRTFSLTSSVRPRNL*
Ga0126375_113397972	3300012948	Tropical Forest Soil	DASGFRGGDVIYLINTDQYSTVTVSSATSTTIVLAAPGVPQPYAQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANSVTGFTLTYFDTNDVVIPAANLAANLGSIRRIMVTLTAQSASGPVDARTFTLTTSVRPRNL*
Ga0126369_119858881	3300012971	Tropical Forest Soil	INTDQYSTATVASASGTTITLASPGVPQPYAQGIQVGRPKLVRFAWDNVSTLLKDSGTGGGLQPLANRVTGFSLTYFDTNDVVIPAGNLAANLGSIRRIMVTLTTQSSNGPVDARTFTLTTSVRPRNL*
Ga0180066_11047302	3300014873	Soil	PVAYSQGVQVGRPKLIRFVWDSVSTIFKDAGTGAGLQPLATGVTSCALTYFNVNDVAIPAGSLPANLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL*
Ga0180104_12003442	3300014884	Soil	ASATVITIGAPGVPVPYSQGVQVGRPKLIRFVWDGVSTIFKDAGMGAGLQPLATGVTACAMTYFDVNDVVIPAVSLPANLGNIRRIVVTMTAQSNGTQEQRTFSLTSSVRPRNL*
Ga0137409_106823431	3300015245	Vadose Zone Soil	VQVGRPKLVRFVWDNVNTIFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRSFSLTSSVRPRNL*
Ga0182036_114992842	3300016270	Soil	GRPKLVRFAWDNVSTLRKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0184648_10078791	3300019249	Groundwater Sediment	LNVVNASGFAAGDTIYLINTDQFSTVTVGSASGTVITIGPPGVPVAYSQGVQVGRPKLIRFAWDNVSTIFKDAGMGGGLQPLATGVTACALTYFDVNDVVIPAVALPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0180113_12098831	3300020065	Groundwater Sediment	TGASTTLTANANVNDTTLNVVNASGFAAGDTIYLINTDQFSAVTVGSASGTVITISPPGVPIAYSQGVQVGRPKLIRFVWNNVDTIFKDAGMGAGLQPLATGVTACAMTYFDVNDVVIPAVSLPANLGNIRRIVVTLTAQSAASQEQRTFSLTSSVRPRNL
Ga0184649_11360461	3300020068	Groundwater Sediment	SGTVITINPPGVPVAYSQGVQVGRPKLVRFVWDSVSTIFKDAGMGAGLQPLATGVTACALTYFDVNDVVIPPEALPANLGNIRRIVVTMTAQSNGTQEQRTFSLTSSVRPRNL
Ga0210377_102885141	3300021090	Groundwater Sediment	LNVVNASGFTAGDTIYLINTDQFSTVTVGSASGTVITINPPGVPVAYSQGVQVGRPKLIRFVWDSVSTIFKDAGTGAGLQPLATGVTSCALTYFNVNDVAIPAGSLPANLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209322_103521452	3300025146	Soil	GAGLQPLATGVTACALTYFDANDVVIPAVSLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209109_100880341	3300025160	Soil	NVNDMTLNVANASGFTAGDTIYLINTDQFSTVTVGSASGTVITIGAPGVPVAYSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDANDVVIPAVSLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209002_100895402	3300025289	Soil	RFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDVNDVAIPAGDLPANLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209431_109910582	3300025313	Soil	PKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDVNDVAIPAGDLPANLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209519_104634541	3300025318	Soil	NVVNASGFTAGDTIYLINTDQFSTVTVGSASGTVITIGPPGVPVAYSQGVQVGRPKLIRFVWDNVSTIFKDDGMGAGLQPLATGVTACALTYFDASDVAIPAVNLPANLGNIRRVVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209520_103776501	3300025319	Soil	GMGAGLQPLATGVTACALTYFDASDVAIPAVNLPANLGNIRRVVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209641_100988503	3300025322	Soil	TVGSSSGTVITIGAPGVPVAYSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDANDVVIPAVNLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209640_109882062	3300025324	Soil	YSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDANDVVIPAVSLPGNLGNIRRIVATMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0209341_110767812	3300025325	Soil	GDTIYLINTDQFSTVTVGSASGTVITIGAPGVPVAYSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDANDVVIPAVNLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0207423_10152872	3300025535	Natural And Restored Wetlands	ADLTGASTRLTADANTNDTTLAVVDASGFVAGDVIYLINTDQFSTVTVSSVAGTTIVLATPGVPKPYAQGVQVGRPKPVRFVWDNVNTLLKDAGAGTGLQPLATGVTGLNLTYFDTNDVVILPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFDLTSSVRPRNL
Ga0210132_10398601	3300025538	Natural And Restored Wetlands	STVTVSSVAGTTIVLASPGVPMPYAQGVQVGRPKLVRFVWDNVSILLKDAGSGTGLQPLATGVTGLNLTYFDTNDVVILPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFDLTSSVRPRN
Ga0210108_10903452	3300025560	Natural And Restored Wetlands	ADANTSDTVLTVVDASGFMAGDVIYLINTDQFSTVTVSSVAGTTIVLASPGVPMPYAQGVQVGRPKLVRFVWDNVSILLKDAGSGTGLQPLATGVTGLNLTYFDTNDVVIPPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFNLTSSVRPRNL
Ga0210108_11030312	3300025560	Natural And Restored Wetlands	IFKDAGTGAGLQPLAAGVTGYTMTYYDSNDVVIPAGSLPGNLGNIRRLVVALTARSAGSQEQRTFSLTSSVRPRNL
Ga0210073_10260372	3300025569	Natural And Restored Wetlands	MPYAQGVQVGRPKLVRFVWDNVSILLKDAGSGTGLQPLATGVTGLNLTYFDTNDVVIPPGSLAGNLGNIRRIVVTLTAQSAGSVDSRTFNLTSSVRPRNL
Ga0207646_104297982	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL
Ga0209055_12884822	3300026309	Soil	LWNGIDTVFKDAGTGLGFQPLATGVTGFQLTYFDTSDVAIPVASLGASLNLIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL
Ga0209159_12526052	3300026343	Soil	QVGRPKQIRYLWNGIDTVFKDAGTGLGFQPLATGVTGFQLTYFDTSDVAIPVASLGASLNLIRRVVVTLTAQSAGTDEVRSFTLTSSVRPRNL
Ga0257170_10517272	3300026351	Soil	TLLKDAGTGLGFQPLATGVTGFQLTYFDTNDVAIPVASLGASLNLIRRVVVTLTAQSGGTDEVRSFTLTSSVRPRNL
Ga0209117_11855882	3300027645	Forest Soil	GFAAGDTIYLINTDQFSTVTVGSASGTVITISPPGVPVAYSQGVQVGRPKLIRFVWNNVDTIFKDAGTGLQPLATGVTGYTMTYFDVNDVVIPAMNLPGNLGNIRRIAVTLTAQTAANQEQRTFSLTSSVRPRNL
Ga0208991_11089871	3300027681	Forest Soil	WDSVNTIFKDAGLGAGLQPLATGVTACALTYFDANDVAIPPLGLAANLGNIRRMVVTLTAQSAGNQEQRTFSLTSSVRPRNL
Ga0209590_109689702	3300027882	Vadose Zone Soil	GRPKLIRFVWDNVNTMFKDAGEGAGLQPLAVGVTACNLTYFDANDIVILPVNLTANLGNIRRIVVTLTAQSTGNQEQRSFSLTSSVRPRNL
Ga0307504_102143462	3300028792	Soil	AGDVVYLINTDQFSTVTVTSAAGTVINIGAPGVPVAYSQGVQVGRPKLVRFVWDNVNTVFKDAGLGAGLQPLATGVTACTLTYFDVNDVAIPAVSLAGNLGNIRRLVVTLTAQSAGNQEQRTFSLTSSVRPRNL
Ga0307469_108877672	3300031720	Hardwood Forest Soil	AGTVITLNAPGVPVAYSQGVQVGRPKLVRFVWDNVNTIFKDAGAGAGLQPLAVGVTTCALTYFDANDIAILPANLPANLGNIRRIVVTLTAQSTGNQEQRSFSLTSSVRPRNL
Ga0318492_103698701	3300031748	Soil	INTDQYSTVTVSSATGTTIVLAPTGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0318521_100682682	3300031770	Soil	VTVSSATGTTIVLAPTGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0307473_102119631	3300031820	Hardwood Forest Soil	LKDAGEGAGLQPLAVGVTACNLTYFDANDIVILPANLNANLGNIRRIVVTLTAQSTGNQEQRSFSLTSSVRPRNL
Ga0310917_109972582	3300031833	Soil	NANTSDTTLTVADASGFRGGDVIYLINTDQYSTVTVSSATGTTIVLAPTGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0310912_114579482	3300031941	Soil	STVIVSSATGTTIVLAPTGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0310909_102476181	3300031947	Soil	PKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0318562_100406663	3300032008	Soil	PYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0307471_1007803902	3300032180	Hardwood Forest Soil	NGAGLQTLANGVTNLNLAYFDANDVLIPAGSLAGNLGNIRRIVVTMTAQSTGSMESRSFDLTSSVRPRNL
Ga0307472_1003314281	3300032205	Hardwood Forest Soil	AYSQGVQVGRPKLVRFVWDNVNTIFKDAGAGAGLQPLAVGVTTCALTYFDANDIAILPANLPANLGNIRRIVVTLTAQSTGNQEQRTFSLTSSVRPRNL
Ga0335083_105507952	3300032954	Soil	SASGTTITLSSPGVPVAYSQGVQVGRPKLVRFVWDNVGTLLKDAGDGAGLQPLAAGVTGFNLTYFDTADVAIPPGSLSANLGSIRRIVVTLTTQSTGTVDPRTFNLTSSVRPRNL
Ga0335084_105364121	3300033004	Soil	TDQYSTATVQSASGTTITLSSPGVPVAYSQGVQVGRPKLVRFVWDNVGTLLKDAGDGAGLQPLAAGVTGFNLTYFDTADVAIPPGSLSANLGSIRRIVVTLTTQSTGTVDPRTFNLTSSVRPRNL
Ga0318519_100128031	3300033290	Soil	LINTDQYSTVTVSSATGTTIVLAPTGVPQPYTQGVQVGRPKLVRFVWDNVSTLLKDSGTGGGLQPLANGVTGFTLTYFDTSDVVIPAASLAANLGSIRRIMVTLTAQSVSGPLDARTFTLTTSVRPRNL
Ga0214472_114633221	3300033407	Soil	YSQGVQVGRPKLIRFVWDNVSTIFKDAGMGAGLQPLATGVTATALTYFDVNDVVIPAVSLPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0326730_10809231	3300033500	Peat Soil	GASTRLTADANTNDTTLAVVDASGFMAGDVIYLINTDQFSTVTVSSVAGTTIVLASPGVPIPYAQGVQVGRPKLVRFAWDNLSTLLKDAGAGTGLQPLATGVTGLNLTYFDTNDVVIPQASLAGNLGNIRRIVVTLTAQSAGSVDSRTFNLTSSVRPRNL
Ga0326723_0016384_1_306	3300034090	Peat Soil	PIPYAQGVQVGRPKLVRFAWDNLSTLLKDAGAGTGLQPLATGVTGLNLTYFDTNDVVIPQASLAGNLGNIRRIVVTLTAQSAGSVDSRTFNLTSSVRPRNL
Ga0370484_0088738_391_798	3300034125	Untreated Peat Soil	TAGDTIYLINTDQFSTVTVGSASGTVITIGPPGVPVAYSQGVQVGRPKLVRFVWDNVSTIFKDAGTGAGLQPLASGVTACTLTYFDVNDVAIPPGALPGNLGNIRRLVVTLTAQSAATQEQRTFSLTSSVRPRNL
Ga0364942_0248334_258_581	3300034165	Sediment	IGTPGVPVAYSQGVQVGRPKLVRFVWDNVSTIFKDAGMGAGLQPLATGVTACALTYFDVNDVVIPAVALPGNLGNIRRIVVTMTAQSAGTQEQRTFSLTSSVRPRNL
Ga0364932_0016688_2410_2754	3300034177	Sediment	ASGTVITIGAPGLPVAYSQGVQVGRPKLIRFVWDNVSTIFKDAGTGAGLQPLATGVTASTLTYFDVNDVAIAPGVLPGNLGNIRRIVVTMTAQSASTQEQRTFSLTSSVRPRNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences