Metagenome / Metatranscriptome Family F081059

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	59 residues
Representative Sequence	VGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Number of Associated Samples	76
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.49 %
% of genes from short scaffolds (< 2000 bps)	92.11 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (73.684 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (30.702 % of family members)
Environment Ontology (ENVO)	Unclassified (68.421 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.561 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI12421J11937_100188017 2JGI12421J11937_100826683 3JGI12421J11937_100983093 4JGI12421J11937_101507402 5Ga0007760_110910891 6Ga0070374_100026651 7Ga0070374_105613932 8Ga0049081_101243061 9Ga0049081_103320022 10Ga0049080_101752942 11Ga0049085_100723841 12Ga0049085_101444801 13Ga0075467_107302332 14Ga0102828_10832501 15Ga0102919_11586051 16Ga0102859_11202882 17Ga0102859_11957311 18Ga0105747_10709751 19Ga0108970_110202091 20Ga0102829_12130692 21Ga0102860_11328862 22Ga0114973_101561051 23Ga0114980_103163401 24Ga0114980_105459092 25Ga0114968_101769191 26Ga0114968_106519831 27Ga0114968_106865182 28Ga0114978_100132711 29Ga0114981_100079341 30Ga0114981_102648122 31Ga0114981_103626211 32Ga0114981_104799401 33Ga0114966_104662071 34Ga0114970_104832331 35Ga0114979_108150862 36Ga0114969_102399083 37Ga0114969_105074092 38Ga0114974_107973332 39Ga0133913_120273741 40Ga0133913_127838351 41Ga0119955_11402644 42Ga0164293_110309201 43Ga0181364_10373751 44Ga0181350_10959351 45Ga0181347_10150941 46Ga0181362_10904462 47Ga0181362_11165972 48Ga0181365_10924782 49Ga0181365_11072532 50Ga0181365_11365622 51Ga0181365_11685181 52Ga0181356_10715793 53Ga0181356_11413401 54Ga0181356_12520352 55Ga0181358_11456111 56Ga0181357_11646911 57Ga0181355_12022291 58Ga0181355_12729822 59Ga0181359_11173203 60Ga0181359_11238621 61Ga0181359_11799011 62Ga0181359_12681582 63Ga0211735_107039382 64Ga0211731_113766341 65Ga0222714_102483501 66Ga0222713_100898044 67Ga0222712_108185872 68Ga0181354_12400181 69Ga0181351_11254273 70Ga0181351_11568831 71Ga0214917_102992792 72Ga0214923_102525701 73Ga0244775_105637851 74Ga0244775_113957182 75Ga0208916_103122082 76Ga0208942_11426082 77Ga0208942_11508551 78Ga0209356_11487871 79Ga0209357_11444012 80Ga0208975_10608231 81Ga0208975_10814783 82Ga0209553_11003321 83Ga0209087_12387882 84Ga0209355_12458231 85Ga0209596_11003235 86Ga0209596_12743371 87Ga0209596_13759341 88Ga0209296_10835856 89Ga0209296_12370702 90Ga0209296_12547731 91Ga0209246_101932931 92Ga0209107_105074341 93Ga0209353_101846083 94Ga0209353_102373553 95Ga0209354_104172461 96Ga0209550_107802021 97Ga0209400_12402302 98Ga0209401_10825264 99Ga0209401_12254502 100Ga0209298_102915542 101Ga0315291_107874363 102Ga0315291_108706072 103Ga0315291_110802522 104Ga0315293_110444322 105Ga0315285_109035882 106Ga0315274_112303001 107Ga0315284_123872651 108Ga0315277_105155571 109Ga0315268_126460451 110Ga0315271_118616352 111Ga0315286_122537362 112Ga0315275_120949791 113Ga0334722_106356531 114Ga0334722_108491962
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI12421J11937_100188017 2Ga0049081_103320022 3Ga0049080_101752942 4Ga0119955_11402644 5Ga0181347_10150941 6Ga0181355_12729822
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1JGI12421J11937_100188017 2Ga0049081_103320022 3Ga0049080_101752942 4Ga0119955_11402644 5Ga0181347_10150941 6Ga0181355_12729822
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.75% β-sheet: 24.56% Coil/Unstructured: 73.68%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13578	Methyltransf_24	86.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	7.89 %
Unclassified	root	N/A	2.63 %
Viruses	superkingdom	All Organisms → Viruses	89.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.89 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	73.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.79 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	73.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.79 %
Unclassified	root	N/A	2.63 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	73.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	73.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.79 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	9.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.79 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.79 %
Unclassified	root	N/A	2.63 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.65 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10018801	All Organisms → Viruses → Predicted Viral	2566	Open in IMG/M
3300000756\|JGI12421J11937_10082668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	924	Open in IMG/M
3300000756\|JGI12421J11937_10098309	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	805	Open in IMG/M
3300000756\|JGI12421J11937_10150740	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	575	Open in IMG/M
3300004793\|Ga0007760_11091089	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	617	Open in IMG/M
3300005517\|Ga0070374_10002665	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8002	Open in IMG/M
3300005517\|Ga0070374_10561393	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	568	Open in IMG/M
3300005581\|Ga0049081_10124306	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005581\|Ga0049081_10332002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	518	Open in IMG/M
3300005582\|Ga0049080_10175294	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	713	Open in IMG/M

Showing 1 to 10 of 111 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.12%
Plants	Host-Associated → Plants	0.88%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.84%
Leaf	Host-Associated → Plants → Leaf	0.88%
Marine	Environmental → Aquatic → Marine	12.28%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.26%
Lake	Environmental → Aquatic → Freshwater → Lake	43.86%
Lentic	Environmental → Aquatic → Freshwater → Lentic	42.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.39%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.26%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.39%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	12.28%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	38.60%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.58%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.75%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.26%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.75%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.63%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.88%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.63%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	4.39%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	30.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	26.32%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.28%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300004793	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M

Showing 1 to 10 of 76 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100188017	3300000756	Freshwater And Sediment	VGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
JGI12421J11937_100826683	3300000756	Freshwater And Sediment	DIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
JGI12421J11937_100983093	3300000756	Freshwater And Sediment	FTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
JGI12421J11937_101507402	3300000756	Freshwater And Sediment	YFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0007760_110910891	3300004793	Freshwater Lake	IKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYADKVS*
Ga0070374_100026651	3300005517	Freshwater Lake	FFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0070374_105613932	3300005517	Freshwater Lake	LPGVPFFTEVGANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0049081_101243061	3300005581	Freshwater Lentic	FAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0049081_103320022	3300005581	Freshwater Lentic	MHRSVITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0049080_101752942	3300005582	Freshwater Lentic	NKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0049085_100723841	3300005583	Freshwater Lentic	EALPGVTFFAEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYEAFSRGKGYAN*
Ga0049085_101444801	3300005583	Freshwater Lentic	EALPGVTFFAEVGANKQFTGEDIYFFAVANKAEVPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS*
Ga0075467_107302332	3300006803	Aqueous	GFCLMHRSVITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0102828_10832501	3300007559	Estuarine	ALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0102919_11586051	3300007597	Estuarine	GEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0102859_11202882	3300007708	Estuarine	AEVGANKQFTGEDIYFFAVANKAEVPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAKLP*
Ga0102859_11957311	3300007708	Estuarine	VPFFTEVGANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0105747_10709751	3300007974	Estuary Water	KQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0108970_110202091	3300008055	Estuary	GEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0102829_12130692	3300009026	Estuarine	AVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0102860_11328862	3300009056	Estuarine	AGMGFCLMHRSVITRIKEALPGVTFFAEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYEAFSRGKGYAN*
Ga0114973_101561051	3300009068	Freshwater Lake	MHRSVITRIKEALPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0114980_103163401	3300009152	Freshwater Lake	TRIKKALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0114980_105459092	3300009152	Freshwater Lake	TEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0114968_101769191	3300009155	Freshwater Lake	TRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114968_106519831	3300009155	Freshwater Lake	NKAEIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0114968_106865182	3300009155	Freshwater Lake	MHRSVITRIKEALPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114978_100132711	3300009159	Freshwater Lake	DIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114981_100079341	3300009160	Freshwater Lake	TGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKDYAK*
Ga0114981_102648122	3300009160	Freshwater Lake	MHRSGITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114981_103626211	3300009160	Freshwater Lake	QFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114981_104799401	3300009160	Freshwater Lake	TGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0114966_104662071	3300009161	Freshwater Lake	DIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0114970_104832331	3300009163	Freshwater Lake	SAAGMGFCLMHRSVITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114979_108150862	3300009180	Freshwater Lake	PFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN*
Ga0114969_102399083	3300009181	Freshwater Lake	EVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0114969_105074092	3300009181	Freshwater Lake	EDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN*
Ga0114974_107973332	3300009183	Freshwater Lake	LPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0133913_120273741	3300010885	Freshwater Lake	DIYFFAVVNKAEIPLWCDTSATVGHMKRFNMDENYYDAFGKGKGYAD*
Ga0133913_127838351	3300010885	Freshwater Lake	GANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGKGKGYAD*
Ga0119955_11402644	3300012006	Freshwater	SKQFTGEDIYFFAVVNKAEVPLWCDTGATVGHMKRFNMDEHYYDAFNKNNTN*
Ga0164293_110309201	3300013004	Freshwater	NKQFTGEDIYFFAVVNKAEIPLWCYTAATVGHMKRFNMDENYYDAFGRGKGYAD*
Ga0181364_10373751	3300017701	Freshwater Lake	MHRSVITRIKEALPGVTFFAEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYANGVS
Ga0181350_10959351	3300017716	Freshwater Lake	VITRIKKALPGVPFFTEVGANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181347_10150941	3300017722	Freshwater Lake	RRKEIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYANGVS
Ga0181362_10904462	3300017723	Freshwater Lake	GANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181362_11165972	3300017723	Freshwater Lake	ANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181365_10924782	3300017736	Freshwater Lake	FAVVNKAEIPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS
Ga0181365_11072532	3300017736	Freshwater Lake	EIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0181365_11365622	3300017736	Freshwater Lake	KTNKQFTGEDIYFFAVVNKADIQLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181365_11685181	3300017736	Freshwater Lake	PRIKEALPGVSCFTEVGATQQFTDEEIYFFRVLDKAGIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0181356_10715793	3300017761	Freshwater Lake	CLMHRSVITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVANKAEVPLWCDTSATVGHMKRFNMDENYYDAFGRGKGYAGLS
Ga0181356_11413401	3300017761	Freshwater Lake	QFTGEDIYFFAVANKAEVPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS
Ga0181356_12520352	3300017761	Freshwater Lake	AVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181358_11456111	3300017774	Freshwater Lake	IKEALPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0181357_11646911	3300017777	Freshwater Lake	RSKEALPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0181355_12022291	3300017785	Freshwater Lake	AEIPLWCDTGATVGHMKRFNMDENYYDAFNKGNGYAK
Ga0181355_12729822	3300017785	Freshwater Lake	EDIYFFAVANKAEVPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS
Ga0181359_11173203	3300019784	Freshwater Lake	YFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181359_11238621	3300019784	Freshwater Lake	ALPGVPFFTEVGANKMFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDEHYYDAFGRGEGYAN
Ga0181359_11799011	3300019784	Freshwater Lake	MHRSVITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0181359_12681582	3300019784	Freshwater Lake	IKEALPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0211735_107039382	3300020162	Freshwater	CLMHRSVITRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0211731_113766341	3300020205	Freshwater	QFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0222714_102483501	3300021961	Estuarine Water	IYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0222713_100898044	3300021962	Estuarine Water	HRNVITRIKKALPGVPFFTEVGANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0222712_108185872	3300021963	Estuarine Water	DIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0181354_12400181	3300022190	Freshwater Lake	KQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0181351_11254273	3300022407	Freshwater Lake	MHRSVITRIKEALPGIPFFTEVGANKQFTGEDIYFFAVANKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0181351_11568831	3300022407	Freshwater Lake	AEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0214917_102992792	3300022752	Freshwater	YFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0214923_102525701	3300023179	Freshwater	FAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0244775_105637851	3300024346	Estuarine	FTGEDIYFFAVANKAEVPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAKLP
Ga0244775_113957182	3300024346	Estuarine	ALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0208916_103122082	3300025896	Aqueous	GANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0208942_11426082	3300027627	Freshwater Lentic	NVITRIKKALPGVTFFAEVGANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0208942_11508551	3300027627	Freshwater Lentic	FFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYA
Ga0209356_11487871	3300027644	Freshwater Lake	PGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYADKVS
Ga0209357_11444012	3300027656	Freshwater Lake	TEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYADKVS
Ga0208975_10608231	3300027659	Freshwater Lentic	FTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0208975_10814783	3300027659	Freshwater Lentic	NKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209553_11003321	3300027688	Freshwater Lake	VGANKQFTGEDIYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0209087_12387882	3300027734	Freshwater Lake	IYFFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0209355_12458231	3300027744	Freshwater Lake	RIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209596_11003235	3300027754	Freshwater Lake	PFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGKGKGYAD
Ga0209596_12743371	3300027754	Freshwater Lake	VIKRIKEALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209596_13759341	3300027754	Freshwater Lake	TRIKKALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKDYAK
Ga0209296_10835856	3300027759	Freshwater Lake	FTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209296_12370702	3300027759	Freshwater Lake	VPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209296_12547731	3300027759	Freshwater Lake	NKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209246_101932931	3300027785	Freshwater Lake	KEALPGVTFFAEVGANKQFTGEDIYFFAVANKAEVPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209107_105074341	3300027797	Freshwater And Sediment	GEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0209353_101846083	3300027798	Freshwater Lake	LPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209353_102373553	3300027798	Freshwater Lake	GEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0209354_104172461	3300027808	Freshwater Lake	RIKEALPGVTFFAEVGANKQFTGEDIYFFAVVNKAEIPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS
Ga0209550_107802021	3300027892	Freshwater Lake	LWCDTAATVGHMKRFNMDENYYDAFGRGKGYADKVS
Ga0209400_12402302	3300027963	Freshwater Lake	KVLPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGKGKGYAD
Ga0209401_10825264	3300027971	Freshwater Lake	NKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0209401_12254502	3300027971	Freshwater Lake	TEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDSFSKGKGYAD
Ga0209298_102915542	3300027973	Freshwater Lake	MHRNVVTRIKKALPGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKDYAK
Ga0315291_107874363	3300031707	Sediment	NKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0315291_108706072	3300031707	Sediment	ANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0315291_110802522	3300031707	Sediment	FAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0315293_110444322	3300031746	Sediment	TGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYEAFSRGKGYAN
Ga0315285_109035882	3300031885	Sediment	EVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0315274_112303001	3300031999	Sediment	KQFTGEDIYFFAVVNKAEIPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS
Ga0315284_123872651	3300032053	Sediment	PFFTEVGANKQFTGEDIYFFAVANKADIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAN
Ga0315277_105155571	3300032118	Sediment	PFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0315268_126460451	3300032173	Sediment	FFAVVNKADIPLWCDTGATVGHMKRFNMDENYYDAFSRGKGYAN
Ga0315271_118616352	3300032256	Sediment	VITRIKEALPNVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0315286_122537362	3300032342	Sediment	SVITRIKEALPGVTFFAEVGANKQFTGEDIYFFAVVNKAEIPLWCDTSATVGHMKRFNMGEDYYDAFGRGKGYAGLS
Ga0315275_120949791	3300032401	Sediment	VGANKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0334722_106356531	3300033233	Sediment	PGVPFFTEVGANKQFTGEDIYFFAVVNKAEIPLWCDTAATVGHMKRFNMDENYYDAFGRGKGYAD
Ga0334722_108491962	3300033233	Sediment	NKQFTGEDIYFFAVVNKAEIPLWCDTGATVGHMKRFNMDENYYEAFSRGKGYAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081059

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences