Metagenome / Metatranscriptome Family F081056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	73 residues
Representative Sequence	KPFTADDLYHAVRDAITRATDLAAIAEAEIVRAHAGLSRLALALEASRTMRVQTLDLVVAARELRRAAAVQD
Number of Associated Samples	102
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.75 %
% of genes near scaffold ends (potentially truncated)	93.86 %
% of genes from short scaffolds (< 2000 bps)	94.74 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.561 % of family members)
Environment Ontology (ENVO)	Unclassified (24.561 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (28.070 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.00% β-sheet: 0.00% Coil/Unstructured: 33.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13560	HTH_31	5.26
PF00313	CSD	4.39
PF00072	Response_reg	3.51
PF04120	Iron_permease	2.63
PF00440	TetR_N	1.75
PF00118	Cpn60_TCP1	1.75
PF06724	DUF1206	1.75
PF01381	HTH_3	1.75
PF13440	Polysacc_synt_3	0.88
PF13977	TetR_C_6	0.88
PF04366	Ysc84	0.88
PF08448	PAS_4	0.88
PF00749	tRNA-synt_1c	0.88
PF02630	SCO1-SenC	0.88
PF02771	Acyl-CoA_dh_N	0.88
PF17167	Glyco_hydro_36	0.88
PF00196	GerE	0.88
PF09678	Caa3_CtaG	0.88
PF00343	Phosphorylase	0.88
PF11066	DUF2867	0.88
PF00989	PAS	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.75
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.88
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.88
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	31.58 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	11.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.02 %
Unclassified	root	N/A	7.02 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	31.58 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.40 %
Unclassified	root	N/A	7.02 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.26 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	30.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.40 %
Unclassified	root	N/A	7.02 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.26 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	30.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.40 %
Unclassified	root	N/A	7.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.26 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	29.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.40 %
Unclassified	root	N/A	7.02 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	29.82 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	11.40 %
Unclassified	root	N/A	7.02 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02HB1OT	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	639	Open in IMG/M
2228664021\|ICCgaii200_c0841172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	800	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11087948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	967	Open in IMG/M
3300000956\|JGI10216J12902_113493992	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300004145\|Ga0055489_10077867	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300004153\|Ga0063455_101189910	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300004480\|Ga0062592_101217561	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005337\|Ga0070682_101745989	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005366\|Ga0070659_102065666	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005441\|Ga0070700_100654656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300005455\|Ga0070663_101378981	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005458\|Ga0070681_10548626	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300005518\|Ga0070699_100152483	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300005535\|Ga0070684_100230820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1690	Open in IMG/M
3300005545\|Ga0070695_101788321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	515	Open in IMG/M
3300005546\|Ga0070696_101727669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	540	Open in IMG/M
3300005564\|Ga0070664_100820803	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300005578\|Ga0068854_100934577	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005616\|Ga0068852_102644299	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005719\|Ga0068861_102464852	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300006804\|Ga0079221_10263009	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300006847\|Ga0075431_102180369	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006852\|Ga0075433_10480054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1095	Open in IMG/M
3300006852\|Ga0075433_11557777	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006918\|Ga0079216_11196236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	610	Open in IMG/M
3300009078\|Ga0105106_10051275	All Organisms → cellular organisms → Bacteria	3051	Open in IMG/M
3300009078\|Ga0105106_10956500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	609	Open in IMG/M
3300009087\|Ga0105107_10973558	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	591	Open in IMG/M
3300009157\|Ga0105092_10307379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	895	Open in IMG/M
3300009166\|Ga0105100_10166632	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1309	Open in IMG/M
3300009168\|Ga0105104_10127348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1373	Open in IMG/M
3300009171\|Ga0105101_10205244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	954	Open in IMG/M
3300010371\|Ga0134125_12844631	Not Available	526	Open in IMG/M
3300010373\|Ga0134128_11157551	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300010373\|Ga0134128_11938634	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300010375\|Ga0105239_10148423	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2616	Open in IMG/M
3300010396\|Ga0134126_11143979	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300010999\|Ga0138505_100053976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	583	Open in IMG/M
3300011000\|Ga0138513_100034713	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300011119\|Ga0105246_10521411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1013	Open in IMG/M
3300011431\|Ga0137438_1083435	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	966	Open in IMG/M
3300012908\|Ga0157286_10050810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1063	Open in IMG/M
3300012911\|Ga0157301_10022143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1415	Open in IMG/M
3300012951\|Ga0164300_10800400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	584	Open in IMG/M
3300012957\|Ga0164303_11249788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	546	Open in IMG/M
3300012958\|Ga0164299_10278726	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012960\|Ga0164301_11758199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	520	Open in IMG/M
3300012988\|Ga0164306_10493307	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	940	Open in IMG/M
3300013096\|Ga0157307_1022935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1042	Open in IMG/M
3300013100\|Ga0157373_10461354	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300013306\|Ga0163162_11596165	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014325\|Ga0163163_11249713	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300015372\|Ga0132256_102217655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	654	Open in IMG/M
3300015373\|Ga0132257_103536084	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300017997\|Ga0184610_1251708	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	587	Open in IMG/M
3300018059\|Ga0184615_10456274	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	693	Open in IMG/M
3300018063\|Ga0184637_10187711	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1270	Open in IMG/M
3300018063\|Ga0184637_10522621	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300018063\|Ga0184637_10622979	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300018063\|Ga0184637_10675719	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	569	Open in IMG/M
3300018068\|Ga0184636_1239980	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300018076\|Ga0184609_10123844	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300018076\|Ga0184609_10215359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	896	Open in IMG/M
3300018076\|Ga0184609_10490770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	560	Open in IMG/M
3300018422\|Ga0190265_10062497	All Organisms → cellular organisms → Bacteria	3317	Open in IMG/M
3300018422\|Ga0190265_11245027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	862	Open in IMG/M
3300018466\|Ga0190268_10663108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	756	Open in IMG/M
3300019254\|Ga0184641_1335493	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	939	Open in IMG/M
3300019259\|Ga0184646_1094928	Not Available	541	Open in IMG/M
3300019259\|Ga0184646_1601873	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300019361\|Ga0173482_10785705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	503	Open in IMG/M
3300021073\|Ga0210378_10026003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2349	Open in IMG/M
3300021090\|Ga0210377_10284011	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1020	Open in IMG/M
3300022756\|Ga0222622_10267523	Not Available	1165	Open in IMG/M
3300025327\|Ga0209751_10876601	Not Available	692	Open in IMG/M
3300025796\|Ga0210113_1106661	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025911\|Ga0207654_11396634	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025912\|Ga0207707_11393847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	559	Open in IMG/M
3300025959\|Ga0210116_1049674	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300026118\|Ga0207675_101100995	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300027561\|Ga0209887_1099191	Not Available	590	Open in IMG/M
3300027722\|Ga0209819_10066361	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300027731\|Ga0209592_1048201	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300027743\|Ga0209593_10198419	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300027979\|Ga0209705_10370866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	717	Open in IMG/M
3300028715\|Ga0307313_10143361	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	736	Open in IMG/M
3300028716\|Ga0307311_10202354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	583	Open in IMG/M
3300028771\|Ga0307320_10087897	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300028811\|Ga0307292_10494679	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	524	Open in IMG/M
3300028819\|Ga0307296_10076116	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300028828\|Ga0307312_10726417	Not Available	658	Open in IMG/M
3300028828\|Ga0307312_11161318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	511	Open in IMG/M
3300028878\|Ga0307278_10015161	All Organisms → cellular organisms → Bacteria	3579	Open in IMG/M
3300030006\|Ga0299907_11307136	Not Available	515	Open in IMG/M
3300030336\|Ga0247826_10411097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1002	Open in IMG/M
3300030620\|Ga0302046_11284572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	573	Open in IMG/M
3300030903\|Ga0308206_1009873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1402	Open in IMG/M
3300030990\|Ga0308178_1008607	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300031081\|Ga0308185_1034396	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	620	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10161446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	618	Open in IMG/M
3300031229\|Ga0299913_10738981	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	960	Open in IMG/M
3300031421\|Ga0308194_10058038	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1011	Open in IMG/M
3300031716\|Ga0310813_10855843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	822	Open in IMG/M
3300031852\|Ga0307410_11495924	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031903\|Ga0307407_11215526	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031908\|Ga0310900_11761989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	526	Open in IMG/M
3300031908\|Ga0310900_11916434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	506	Open in IMG/M
3300031913\|Ga0310891_10148966	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300032003\|Ga0310897_10027770	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300032075\|Ga0310890_11354948	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300033513\|Ga0316628_101244165	Not Available	991	Open in IMG/M
3300033550\|Ga0247829_11486233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	559	Open in IMG/M
3300033811\|Ga0364924_010390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1719	Open in IMG/M
3300034644\|Ga0370548_079727	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.58%
Host-Associated	Host-Associated	17.54%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.39%
Aquatic	Environmental → Aquatic	27.19%
Plants	Host-Associated → Plants	17.54%
Solid Waste	Engineered → Solid Waste	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.75%
Freshwater	Environmental → Aquatic → Freshwater	14.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.40%
Sediment	Environmental → Aquatic → Sediment	10.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Marine	Environmental → Aquatic → Marine	2.63%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.75%
Floodplain	Environmental → Terrestrial → Floodplain	0.88%
Roots	Host-Associated → Plants → Roots	0.88%
Grass	Engineered → Solid Waste → Grass	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.53%
Loam	Environmental → Terrestrial → Soil → Loam	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.51%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.63%
Sand	Environmental → Terrestrial → Soil → Sand	1.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.88%
Composting	Engineered → Solid Waste → Grass → Composting	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.14%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.51%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.51%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.88%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02199970	2170459021	Switchgrass, Maize And Mischanthus Litter	MLKPFTADDLYHAVRDAITRTTDLTSVAEADIVRAHAGLSRLAQALEESRTMRVHTLDLVVAARELRRIKDQE
ICCgaii200_08411722	2228664021	Soil	DLYHAVRDALTRATDLAAVAEAEIVQAHAGLSKLALALEASRTTRVHTLDLVVAARELRRAAGGQS
ICChiseqgaiiFebDRAFT_110879482	3300000363	Soil	DLYHAVRDALTRATDLAAVAEAEIVQAHAGLSKLALALEASRTTRVHTLDLVVAARELRRAAGGQS*
JGI10216J12902_1134939923	3300000956	Soil	PVRVLLKPFTADDLYHAVRDAITRASDLAAVAEAEIVRAHAGLSKLALALEASRTMRVQTLDLVVAARELRRAAVGPS*
Ga0055489_100778671	3300004145	Natural And Restored Wetlands	PDDLYHAVRDAISRVADLTAVAEQEIVRAHAGLSQLARALEASRTARVHTLDLVVAARELRRATAGVV*
Ga0063455_1011899102	3300004153	Soil	PDDLPVRVMLKPFSADDLYHAVRDAITRATDLTRIAEADIVQAHAGLSRLAQALAASRTMRVHILDLVVAARELRRARAQE*
Ga0062592_1012175613	3300004480	Soil	SDTPVRVVLKPFTADDLYHAVRDAITRSAQLVLDAEKEIVQAHAGLSRLAKALEASRMSRLNTVDLIIAARELRRLNQPK*
Ga0070682_1017459891	3300005337	Corn Rhizosphere	LFHAVRDAITRSTDLTNVAEAEIVLAHAGLSRLARALEDSRTTRVHTLDLVVAARELRRIREEE*
Ga0070659_1020656662	3300005366	Corn Rhizosphere	HAVRDAITRSTDLTNVAEAEIVLAHAGLSRLARALEDSRTTRVHTLDLVVAARELRRIREQE*
Ga0070700_1006546561	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PRIGPADTPVRVMLKPFSAEDLYHAVRDAITRAADLITVAEHEIVLAHAGLSRLAAALELSRTMRVQTLDLVVAARELRRIQDSS*
Ga0070663_1013789811	3300005455	Corn Rhizosphere	DDLYHAVRDAITRSTDLTRIAEADIVRAHAGLSRLARALDDSRTTRVNTLDLVVAARELRRIREGA*
Ga0070681_105486263	3300005458	Corn Rhizosphere	VRVVLKPFTADDLYHAVRDAITRSAQLVLDAEKEIVQAHAGLSRLAKALEASRMSRLNTVDLIIAARELRRLNQPK*
Ga0070699_1001524835	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PFTADDLYHAVRDAITRATDLAAVAEAEIVRAHAGLSQLALALETSRTMRLQTLDLVVAARELRRVAAGSD*
Ga0070684_1002308201	3300005535	Corn Rhizosphere	ADDLYHAVRDAITRSTDLTNVAEAEIVLAHAGLSRLARALEDSRTTRVHTLDLVVAARELRRIREQE*
Ga0070695_1017883212	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LKPFSADDLYHAVRDAISRSEDLSSAAEEEIIKAHEGLSRLARSLEDSRTMRVHTLDLVVAARELRRAQRERR*
Ga0070696_1017276692	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SDTPVRVLLKPFTADDLYHAVRDAISRATDLAAVAEAEIVRAHAGLSKLALALVASRTMRVQTVDLIVAARELRRAVGPS*
Ga0070664_1008208033	3300005564	Corn Rhizosphere	LYHAVRDAITRSTDLTRIAEADIVRAHAGLSRLAQALNASRTMRVQTLDLVVAARELRRIREHG*
Ga0068854_1009345772	3300005578	Corn Rhizosphere	PVRVMLKPFTADDLYHAVRDAITRSTDLTNVAEAEIVLAHAGLSRLAQALEASRTMRVHILDLVVAARELRRIREQE*
Ga0068852_1026442992	3300005616	Corn Rhizosphere	DDLYHAVRDAITRSTDLTNVAEAEIVLAHAGLSRLAQALEASRTMRVHILDLVVAARELRRTREQE*
Ga0068861_1024648521	3300005719	Switchgrass Rhizosphere	TPVRVMLKPFSADDLYHAVRDALTRATDLVAIAEMEILQAHEGLSRLALALEASRAIRAQTVDLVAAARELRGGIAAHN*
Ga0079221_102630093	3300006804	Agricultural Soil	AVPRIGPHDHPVRVMLKPFTADDLYHAVRDAITRSTDLTSIAEDEIVLAHAGLSRLARALEASRTMRVHTLDLVVAARELRRFKEQR*
Ga0075431_1021803692	3300006847	Populus Rhizosphere	LKPFTAEDLYHAVRDAITRSADLTSLAEEEIVLAHAGLSRLAQALEASRTLRVHTLDLVVAARELRRIKEQG*
Ga0075433_104800541	3300006852	Populus Rhizosphere	ESSDTPVRVLLKPFTPDDLYHAVRDALSRSADLTAAAELEIVRAHAGLSKLALALEASRTAHVHVLDLVVAARELRRVAPRTD*
Ga0075433_115577771	3300006852	Populus Rhizosphere	AWDAPVRVLRKPFTSEDLYHAVRDAITRATDLAAAAELEIIQAHAGLSKLALALEASRTMRVQTLDLVVAARELRRAAAAPR*
Ga0079216_111962362	3300006918	Agricultural Soil	MLKPFSTDDLYHAVCDAITRSTRLMEAAEREIAEAHAGLSRVALALEASRTSRVQMLDLVAAARELRRSRGSK*
Ga0105106_100512752	3300009078	Freshwater Sediment	MLKPFTAESLYHAVRDAITRSADLVASAEREIAQAHAGLSRLATALEASRTMRGETLDLVIAARGLRRIEGRTN*
Ga0105106_109565001	3300009078	Freshwater Sediment	PFTPDDLYHAVRDAISRVAELTAVAEQEIVRAHAGLSQLAMALEASRTARVHTLDLVVAARELRRATARVV*
Ga0105107_109735582	3300009087	Freshwater Sediment	MLKPFTAESLYHAVRDAITRSADLVASAEREIAQAHAGLSRLAKALEASRTMRGETLDLVIAARGLRRIEGRTN*
Ga0105092_103073791	3300009157	Freshwater Sediment	PVRVLLKPFTADDLHHAVRDAITRATDLAAAAEIEIVRAHAGLSKLALALEMSRTMRVQTLDLVVAARELRRAAGG*
Ga0105100_101666323	3300009166	Freshwater Sediment	RDAITRSADLVASAEREIAQAHAGLSRLATALEASRTMRGETLDLVIAARGLRRIEGRTN
Ga0105104_101273481	3300009168	Freshwater Sediment	IESSDTPVRVLLKPFTADDLNHAVRDAISRATDLAALAEAEIVKAHAGLSKLAMALEASRTMRVQTLDLVVAARELRRAAARPDD*
Ga0105101_102052442	3300009171	Freshwater Sediment	MLKPFTAESLYHAVRDAITRSADLVASAEREIAQAHAGLSRLATALEASRTMRGETLDLVIAARGLRRI
Ga0134125_128446312	3300010371	Terrestrial Soil	RSAELVLDAEKEIIQAHAGLSRLAKALEASRTSRLNAVDLIIAARELRRLNQPK*
Ga0134128_111575512	3300010373	Terrestrial Soil	VRVMLKPFTADDLYHAVRDAITRSTDLTSVAEAEIVLAHAGLSRLAQALEASRTTRVHTLDLVVAARELRRIREHG*
Ga0134128_119386341	3300010373	Terrestrial Soil	SADDLYHAVRDAITRTTDLTSVAEADIVRAHAGLSRLAQALEESRTMRVHTLDLVVAARELRRIKDQE*
Ga0105239_101484231	3300010375	Corn Rhizosphere	TADDVYHAVRDAITRATDLAAVAEAEIVRAHAGLSKLALALEASRTVRVQTIDLVVAARELRRAAAGPR*
Ga0134126_111439791	3300010396	Terrestrial Soil	PFTADDLYHGVRDAITRTTDLTSVAEADIVRAHAGLSRLAQALEESRTMRVHTLDLVVAARELRRIKDQE*
Ga0138505_1000539761	3300010999	Soil	PYIESSDTPVRVLLKPFTSDDLYHAVRDAITRAADLTAVAEAEIVRAHAGLSKLALALEASRTMRVQTKDLVIAARELRRIKRPD*
Ga0138513_1000347132	3300011000	Soil	EDLYHAVRDAITRSADLMSLAEEEIVHAHAGLSRLAQALDASRTMRVHTLDLVVAARELRRIKEQG*
Ga0105246_105214111	3300011119	Miscanthus Rhizosphere	RDAITRSTDLTSVAEAEIVLAHAGLSRLAQALEASRTTRVHTLDLVVAARELRRIREHG*
Ga0137438_10834352	3300011431	Soil	SDIPVRVMLKPFTPEDLYHAVRDAITRSANLIEAAEHEIVQAHSGLSRLAAALEASRTMRVQTLDLVIAARELRRIKGPG*
Ga0157286_100508101	3300012908	Soil	VRDAITRSTDLTNVAEAEIVLAHAGLSRLARALEDSRTTRVHTLDLVVAARELRRIREQE
Ga0157301_100221433	3300012911	Soil	DDLYHAVRDAITRSTDLTSVAEAEIVLAHAGLSRLAQALEASRTTRVHTLDLVVAARELRRIREQE*
Ga0164300_108004001	3300012951	Soil	RRVLLKPFTPDDLYHAVRDALSRSADLTAAAEQEIVRAHAGLSHLASALEASRTSRVHTLDLVVAARELRRAAGQAD*
Ga0164303_112497882	3300012957	Soil	YHAVRDALSRSADLTAAAEQEIVRAHAGLSKLALALEASRTARVHVLDLVVAARELRRVAPRTD*
Ga0164299_102787263	3300012958	Soil	VPHIGPDDIPVRVMLKTFSADDLYHAVRDAITRSTDLTSVAEAEIVLAHAGLSRLAQALEASRTTRVHTLDLVVAARELRRIREQE*
Ga0164301_117581991	3300012960	Soil	TPDDLYHAVRDAITRAADLAALAEHEIVLAHAGLSKLAMTLELSGTMRVRMLDLIVAARNLRRVTSPD*
Ga0164306_104933071	3300012988	Soil	PVRVLLKPFTPDDLYHAVRDALSRSADLTAAAEQEIVRAHAGLSKLALALEASRTARVHVLDLVVAARELRRVAPRTD*
Ga0157307_10229353	3300013096	Soil	VRVMLKPFSADDLYHAVRDAITRSTDLTNVAEAEIVLAHAGLSRLARALEDSRTTRVHTLDLVVAARELRRIREEE*
Ga0157373_104613543	3300013100	Corn Rhizosphere	YHAVRDALTRSAELIRAAEKEIVDAHAGLSRLARALEASRVSRLNTVDLISAARELRRLNEPT*
Ga0163162_115961651	3300013306	Switchgrass Rhizosphere	SADDLYHAVRDAITRSTDLTNVAEAEIVLAHAGLSRLAQALEASRTMRVHILDLVVAARELRRIREQE*
Ga0163163_112497131	3300014325	Switchgrass Rhizosphere	KPFSADDLYHAVRDAITRSTDLTSVAEAEIVLAHAGLSRLAQALNSSRTMRVQTLDLVVAARELRRIREQE*
Ga0132256_1022176552	3300015372	Arabidopsis Rhizosphere	VRVLLKPFSPDDLYHAVRDAISRAADLTAAAEEEIVRAHAGLSRLASALEASRTVRVHVLDLVVAARELRRMAPRTG*
Ga0132257_1035360842	3300015373	Arabidopsis Rhizosphere	DLYHAVRDAITRTTDLTSVAEADIVQAHAGLSRLAQALAASRTMRVHTLDLVVAARELRRIKDQE*
Ga0184610_12517082	3300017997	Groundwater Sediment	DLYHAVRDAITRAADLVEAAEHEIAQAHAGLSRLAAALEASRTTRVQTLDLVIAARELRRIKGPG
Ga0184615_104562742	3300018059	Groundwater Sediment	AEDLYHAVRDAIIRSADLIADAEHEIAQAHAGLSRLAAALEASRTMRGQTLDLVIAARELRRIKGPD
Ga0184637_101877113	3300018063	Groundwater Sediment	RDAITRSANLIEAAEHEIAQAHAGLSRLAAALEASRTMRVQTMDLVIAARELRRIKGPG
Ga0184637_105226212	3300018063	Groundwater Sediment	RVMLKPFTPDDLCHAVRDAMTRAADLAAAAETEIVRAHAGLSKLALALEASRTVRVQTTDLVIAARELGRVAEG
Ga0184637_106229792	3300018063	Groundwater Sediment	VRVLLKPFTPEDLYHAVRDAITRAADLSAVAETEIVRAHAGLSKLALALEASRTMRVQTIDLVIAARELRRATEG
Ga0184637_106757192	3300018063	Groundwater Sediment	RDAITRSANLIEAAEHEIAQAHAGLSRLAAALEASRTMRVQTLDLVIAARELRRIKGPG
Ga0184636_12399801	3300018068	Groundwater Sediment	LYHAVRDAITRATDLAAVAETEIVQVHAGLSKLALALEASRTMRIQTLDLVIAARELRRAAEG
Ga0184609_101238442	3300018076	Groundwater Sediment	DDLYHAVRDVITRATDLVAVAEAEIVRAHAGLSKLALALETGRTMRVQTIDLVIAARELRRAAGGQADARSSLPD
Ga0184609_102153591	3300018076	Groundwater Sediment	VRVLLKPFTPDDLYHAVRDAITRATDLSAVAEAEIVRAHAGLSKLAYAIEASRSTRVQTLDLVVAARELRRAAGG
Ga0184609_104907702	3300018076	Groundwater Sediment	TPVRVLLKPFTADHLYHAVRDAITRTTDLVAIAEADIVRAHAGLGKLALALEMSRTTRVHTLDLIVAARELRRAVGG
Ga0190265_100624974	3300018422	Soil	HAVRDAITRSSSLVASAEQEIAQAHAGLSRLAVALEASRTMRGQRLDLVIAARELRVVKN
Ga0190265_112450271	3300018422	Soil	PHVESSDTPVRVMLKPFTPDDLYHAVRDAITRARDLVAAAETEIVRAHAGLSALAQALEASRTNRVQTVDLVIAARELRRAAEG
Ga0190268_106631081	3300018466	Soil	YIESSDTPVRVLLKPFTADDLHHAVRDAITRATDLAAAAEIEIVRAHAGLSKLALALETSRTMRVQTLDLVVAARELRRAAGGP
Ga0184641_13354932	3300019254	Groundwater Sediment	GDLYHAVRDAITRAANLTAAAEHEIAEAHAGLSRLAAALEASRTMRVQTLDLVIAARELRRIKRPG
Ga0184646_10949282	3300019259	Groundwater Sediment	FTADHLNHAVRDAITRATDLAAIAEAEIVRAHAGLSKLALALETSRTMRVQTLDLVVAARELRRAAGG
Ga0184646_16018731	3300019259	Groundwater Sediment	PYIEYSDTPVRVLLKPFTPEDLYHAVRDAITRAADLSAVAETEIVRAHAGLSKLALALEASRTMRVQTVDLVIAARELRRATEG
Ga0173482_107857052	3300019361	Soil	VPYIETSDTPVRVLLKPFTADDLYHAVRDAISRATDLAAVAEAEIVRAHAGLSKLALALEASRTVRVQTIDLVVAARELRRAVGPS
Ga0210378_100260035	3300021073	Groundwater Sediment	SDTPVRVLLKPFTADDLNHALRDAITRATDLAAIAEAEIVRAYAGLSKLALALETSRMMRVQTLDLVVAARELRRAAGG
Ga0210377_102840112	3300021090	Groundwater Sediment	AQTFTAEDLYHAVRDAITRSADLLAAAEHEIAQAHAGLSRLAAALEASRTTRVQTLDLVIAARELRRIKGPD
Ga0222622_102675232	3300022756	Groundwater Sediment	DDLYHAMRDAITRATDLAVVAETEIVQAHSGLSKLASAIKASRTTRVQTLDLVVAARELRRAAAQD
Ga0209751_108766012	3300025327	Soil	PFTPDDLYHAVRDAITRAKDLAAAAETEIVRAHSGLSKLALALEASRTMRVQTVDLVIAARELRRATEG
Ga0210113_11066611	3300025796	Natural And Restored Wetlands	FSAADLYQAVRDAITRSARLIEAAENEIAQAHAGLSEAAMVLEASRTARVQMLDLVKVARELRRTKPSD
Ga0207654_113966341	3300025911	Corn Rhizosphere	AVRDAITRSTDLTSVAEAEIVLAHAGLSRLAQALEASRTTRVHTLDLVVAARELRRIREQ
Ga0207707_113938471	3300025912	Corn Rhizosphere	SPSDTPVRVVLKPFTADDLYHAVRDAITRSAQLVLDAEKEIVQAHAGLSRLAKALEASRMSRLNTVDLIIAARELRRLNQPK
Ga0210116_10496741	3300025959	Natural And Restored Wetlands	AVRDAISRVADLTAVAEQEIVRAHAGLSQLARALEASRTARVHTLDLVVAARELRRATAGVV
Ga0207675_1011009952	3300026118	Switchgrass Rhizosphere	TPVRVMLKPFSADDLYHAVRDALTRATDLVAIAEMEILQAHEGLSRLALALEASRAIRAQTVDLVAAARELRGGIAAHN
Ga0209887_10991911	3300027561	Groundwater Sand	DAITRATDLAAAAEIEIVRAHAGLSKLAYALEASRTMRVQTLDLVVAARELRRAGARQD
Ga0209819_100663611	3300027722	Freshwater Sediment	PVRVLLKPFTADDLHHAVRDAITRATDLAAAAEIEIVRAHAGLSKLALALEMSRTMRVQTLDLVVAARELRRAAGG
Ga0209592_10482013	3300027731	Freshwater Sediment	LKPFTAESLYHAVRDAITRSADLVASAEREIAQAHAGLSRLATALEASRTMRGETLDLVIAARGLRRIEGRTN
Ga0209593_101984192	3300027743	Freshwater Sediment	VLLKPFTADDLNHAVRDAISRATDLAALAEAEIVKAHAGLSTLALALERSRTMRVQTLDLVVAACELRRAAEGAG
Ga0209705_103708662	3300027979	Freshwater Sediment	MLKPFTAESLYHAVRDAITRSADLVASAEREIAQAHAGLSRLATALEASRTMRGETLDLVIAARGLRRIEGRTN
Ga0307313_101433611	3300028715	Soil	MLKPFTAEDLYHAVRDAITRAADLTAIAEDEIVRAHAGLSRLATALEASRSMRGQMQDLVVAAQELRRMEDSA
Ga0307311_102023541	3300028716	Soil	PFSADDLYHAVRDAISRSTDLAAVAEAEIVRAHAGLSKLALALEASRTMRVQTLDLVVAARELRRAAAGPPIDSPGPSSP
Ga0307320_100878973	3300028771	Soil	IGPGDTPVRVMLKPFTAEDLYHAVLDAITRAADLNAIAEDEIVRAHAGLSRLAKALEASRTMRVQRLDLVAAARELRRIKDLD
Ga0307292_104946791	3300028811	Soil	VPRIGPGDTPVRVMVKPFTAEDLFYAVRDAITRAADLNAIAEDEIAPAHAGLSKLAMALEASRTMRGQMLDLVVAARELRRIKDAG
Ga0307296_100761163	3300028819	Soil	DTPVRVLLKPFSADDLYHAVRDAISRSTDLAAVAEAEIVRAHAGLSKLALALEESRTMRVQTLDLVVAARELRRAAAGLS
Ga0307312_107264171	3300028828	Soil	AITRAADLAAIAEAEIVQAHAGLSKLATALQASHTTRVHVLDLVVAARELRRAGAGPS
Ga0307312_111613181	3300028828	Soil	PFRVMLKPFTADDLYLAIRDALSRTLDLATAAEKEIIKAHVGLSKLARALEDSRTVRVHTLDLVVAARELRRIKPERRKKPRTDRQVAPRGK
Ga0307278_100151614	3300028878	Soil	VRDTITRAADLAAVAEAEIVRAHAGLSKLALALEASRTMRVQTIDLVIAARELRRAAVEQSPEPRPSGPQPLD
Ga0299907_113071361	3300030006	Soil	NHAVRDAITRATDLAAVAEAEIVRAHAGLSKLALALETSRTMRVQTLDLVVAARELRRAAGGQADARPSLPD
Ga0247826_104110974	3300030336	Soil	YVESEDIPVRVLLKPFTADDLYHAVRDAITRATDLAAIAEAEIVRAHAGLSRLALALEASRTMRVQTLDLVVAARELRRAAAVQD
Ga0302046_112845721	3300030620	Soil	RVLLKPFTADDLNHAVRDAITRATDLAAVAEAEIVRAHAGLSKLALALERSRTMRVQTIDLVIAARELRRAAARPDD
Ga0308206_10098733	3300030903	Soil	TAEDLYHAVRDAITRAADLTAIAEDEIVRAHASLGRLATALEGSRTMRGQMQDLVAAAQELRRMKDSA
Ga0308178_10086074	3300030990	Soil	SNVRVMLKPFRADDLYHAVRDTMTRAADLTAIAEYEIAQAHAGLSRLAKALEASRTMRVQRLDLVAAARELRRIKDLD
Ga0308185_10343961	3300031081	Soil	HAVRDAITRAADLTAIAEDEIVRAHASLGKLATALEASRSMRGQMQDLDAAAQELRRMQDSAKGREPSHST
(restricted) Ga0255310_101614461	3300031197	Sandy Soil	TPVRVLLKPFTADDLYHAVRDAITRATDLAAVVEAEIVRAHAGLSKLALALEASRTMRVQTLDLVVAARELRRAAVGPS
Ga0299913_107389811	3300031229	Soil	PVRVLLKPFTADGLNHAVRDAITRATDLAAVAEAEIVRAHAGLSKLALALERSRTMRVQTIDLVIAARELRRAAARPDD
Ga0308194_100580383	3300031421	Soil	VRVMLKPFTAEDLYHAVRDAITRAADLTAIAEDEIVRAHASLGRLATALEGSRTMRGQMQDLVAAAQELRRMKDSA
Ga0310813_108558432	3300031716	Soil	VPYIESSDTPVRVLLKPFTADDLYHAVRDAITRATDLAAVAEAEIVRAHAGLSKLALALVASRTMRVQTVDLVVAARELRRAVGPS
Ga0307410_114959243	3300031852	Rhizosphere	DDLYHAVRDAITRSTDLTSVAEAEIVRAHTGLSRLAQALEASRTMRVHTLDLVVAARELRRIKEQ
Ga0307407_112155261	3300031903	Rhizosphere	GPDDIPVRVMLKPFSADDLSHAVRDAITRATELTRIAEADIVQAHAGLSRLAQALQASRTIRVHAQDLVLAARELRRVKGQA
Ga0310900_117619892	3300031908	Soil	KPFTADDLNHAVRDAITRATDLAAVAEAEIVRAHAGLSKLALALETSRTMRVQTLDLVVAARELRRAAGG
Ga0310900_119164341	3300031908	Soil	TPVRVLLKPFTADDLYHAVRDAISRATDLAAVAEAEIVRAHAGLSKLALALVASRTMRVQTVDLIVAARELRRAAAGPS
Ga0310891_101489662	3300031913	Soil	VRDAITRSTDLTSVAEAEIVLAHTGLSRLARALEDSRTTRVHTLDLVVAARELRRIREQE
Ga0310897_100277704	3300032003	Soil	DAITRSTDLTSVAEAEIVLAHAGLSRLAQALEASRTTRVHTLDLVVAARELRRIREQE
Ga0310890_113549481	3300032075	Soil	DIPVRVMLKPFSADDLYHAVRDAITRSTDLTSVAEAEIVLAHTGLSRLARALEDSRTTRVHTLDLVVAARELRRIREQE
Ga0316628_1012441652	3300033513	Soil	SDIPVRVLLKPFTADDLYHAVRDAITRATDLAAIAEAEIVRAHAGLSKLALALEASRTMRVQTLDLVVAARELRRAAGGPS
Ga0247829_114862331	3300033550	Soil	KPFTADDLYHAVRDAITRATDLAAIAEAEIVRAHAGLSRLALALEASRTMRVQTLDLVVAARELRRAAAVQD
Ga0364924_010390_3_221	3300033811	Sediment	KPFTADHLYHAVRDAITRATDLSAVAEAEIVRAHAGLGKLALALEASRTMRVQTLDLVVAARELRRVARGPN
Ga0370548_079727_2_244	3300034644	Soil	FTPDDLYHAVRDAITRAADVTSVVEADIVRAHAGLGRLAQALDASRTMRVHTRDLVVAARELRRIKDQEEADTPGGRATK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters