Metagenome / Metatranscriptome Family F081048

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081048
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	58 residues
Representative Sequence	MSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Number of Associated Samples	67
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.30 %
% of genes near scaffold ends (potentially truncated)	26.32 %
% of genes from short scaffolds (< 2000 bps)	64.04 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.404 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.825 % of family members)
Environment Ontology (ENVO)	Unclassified (70.175 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.193 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 93.10% β-sheet: 0.00% Coil/Unstructured: 6.90%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF08279	HTH_11	18.42
PF13481	AAA_25	14.91
PF08708	PriCT_1	8.77
PF04480	DUF559	3.51
PF10926	DUF2800	2.63
PF14216	DUF4326	2.63
PF12705	PDDEXK_1	2.63
PF11645	PDDEXK_5	1.75
PF05876	GpA_ATPase	0.88
PF00535	Glycos_transf_2	0.88
PF00145	DNA_methylase	0.88
PF00676	E1_dh	0.88
PF05136	Phage_portal_2	0.88
PF05869	Dam	0.88
PF00356	LacI	0.88
PF01844	HNH	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.88
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.88
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.88
COG5511	Phage capsid protein	Mobilome: prophages, transposons [X]	0.88
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.40 %
Unclassified	root	N/A	38.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.40 %
Unclassified	root	N/A	38.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.40 %
Unclassified	root	N/A	38.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.26 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	14.04 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.51 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14.04 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	2.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples	0.88 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	0.88 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	14.04 %
Puniceicoccales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales	2.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.88 %
uncultured Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples → uncultured Planctomycetota bacterium	0.88 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	14.04 %
Puniceicoccaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae	2.63 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.88 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.88 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.88 %
uncultured Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples → uncultured Planctomycetota bacterium	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	14.04 %
Ruficoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Ruficoccus	2.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.88 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	0.88 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.88 %
uncultured Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples → uncultured Planctomycetota bacterium	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	14.04 %
Ruficoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Ruficoccus	2.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.88 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	0.88 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.88 %
uncultured Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples → uncultured Planctomycetota bacterium	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.60 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	14.04 %
Ruficoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Ruficoccus	2.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.88 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	0.88 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.88 %
uncultured Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples → uncultured Planctomycetota bacterium	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003490\|JGI25926J51410_1018695	All Organisms → cellular organisms → Bacteria → PVC group	1371	Open in IMG/M
3300003493\|JGI25923J51411_1076130	Not Available	576	Open in IMG/M
3300004448\|Ga0065861_1076339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Ruficoccus	2528	Open in IMG/M
3300005581\|Ga0049081_10009228	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3742	Open in IMG/M
3300005581\|Ga0049081_10040554	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300005581\|Ga0049081_10065913	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1363	Open in IMG/M
3300006005\|Ga0073910_1007089	Not Available	729	Open in IMG/M
3300006805\|Ga0075464_10004477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6543	Open in IMG/M
3300006805\|Ga0075464_10032945	All Organisms → cellular organisms → Bacteria → PVC group	2775	Open in IMG/M
3300006805\|Ga0075464_10236857	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1089	Open in IMG/M
3300007559\|Ga0102828_1141191	Not Available	601	Open in IMG/M
3300009026\|Ga0102829_1082329	Not Available	991	Open in IMG/M
3300009026\|Ga0102829_1179601	Not Available	683	Open in IMG/M
3300009068\|Ga0114973_10007885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7051	Open in IMG/M
3300009068\|Ga0114973_10060739	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → environmental samples → uncultured Planctomycetota bacterium	2207	Open in IMG/M
3300009151\|Ga0114962_10296548	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	904	Open in IMG/M
3300009152\|Ga0114980_10045006	All Organisms → cellular organisms → Bacteria	2691	Open in IMG/M
3300009154\|Ga0114963_10004510	All Organisms → cellular organisms → Bacteria	9573	Open in IMG/M
3300009154\|Ga0114963_10437839	Not Available	703	Open in IMG/M
3300009155\|Ga0114968_10004306	All Organisms → cellular organisms → Bacteria	10622	Open in IMG/M
3300009155\|Ga0114968_10007290	All Organisms → cellular organisms → Bacteria	8106	Open in IMG/M
3300009158\|Ga0114977_10214102	Not Available	1125	Open in IMG/M
3300009159\|Ga0114978_10010760	All Organisms → cellular organisms → Bacteria	7048	Open in IMG/M
3300009160\|Ga0114981_10602340	Not Available	584	Open in IMG/M
3300009161\|Ga0114966_10364873	Not Available	855	Open in IMG/M
3300009163\|Ga0114970_10397244	Not Available	767	Open in IMG/M
3300009163\|Ga0114970_10426104	Not Available	734	Open in IMG/M
3300009164\|Ga0114975_10005283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8392	Open in IMG/M
3300009180\|Ga0114979_10006519	All Organisms → cellular organisms → Bacteria	7678	Open in IMG/M
3300009684\|Ga0114958_10291649	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	800	Open in IMG/M
3300010885\|Ga0133913_10078605	All Organisms → cellular organisms → Bacteria	8848	Open in IMG/M
3300010885\|Ga0133913_10412532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Ruficoccus	3569	Open in IMG/M
3300010885\|Ga0133913_10564377	Not Available	2992	Open in IMG/M
3300010885\|Ga0133913_11664236	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1606	Open in IMG/M
3300010885\|Ga0133913_11670001	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	1603	Open in IMG/M
3300010885\|Ga0133913_12903569	Not Available	1149	Open in IMG/M
3300011334\|Ga0153697_1134	All Organisms → cellular organisms → Bacteria	26168	Open in IMG/M
3300012012\|Ga0153799_1090079	Not Available	548	Open in IMG/M
3300012728\|Ga0157552_1243844	All Organisms → cellular organisms → Bacteria → PVC group	666	Open in IMG/M
3300013014\|Ga0164295_10390334	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1058	Open in IMG/M
3300013372\|Ga0177922_10428883	Not Available	594	Open in IMG/M
3300017701\|Ga0181364_1006389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2023	Open in IMG/M
3300017761\|Ga0181356_1039376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300017761\|Ga0181356_1231261	All Organisms → cellular organisms → Bacteria → PVC group	534	Open in IMG/M
3300017774\|Ga0181358_1041284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1771	Open in IMG/M
3300017774\|Ga0181358_1137314	Not Available	846	Open in IMG/M
3300017774\|Ga0181358_1153415	Not Available	785	Open in IMG/M
3300017774\|Ga0181358_1179306	Not Available	706	Open in IMG/M
3300017777\|Ga0181357_1041184	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1815	Open in IMG/M
3300017777\|Ga0181357_1177500	Not Available	771	Open in IMG/M
3300017778\|Ga0181349_1216413	Not Available	655	Open in IMG/M
3300017778\|Ga0181349_1290368	Not Available	533	Open in IMG/M
3300017785\|Ga0181355_1059055	All Organisms → cellular organisms → Bacteria → PVC group	1621	Open in IMG/M
3300017785\|Ga0181355_1240475	Not Available	697	Open in IMG/M
3300018790\|Ga0187842_1034100	All Organisms → cellular organisms → Bacteria → PVC group	1638	Open in IMG/M
3300018868\|Ga0187844_10158281	Not Available	991	Open in IMG/M
3300019093\|Ga0187843_10154742	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	993	Open in IMG/M
3300019784\|Ga0181359_1006398	All Organisms → cellular organisms → Bacteria → PVC group	3928	Open in IMG/M
3300019784\|Ga0181359_1009253	All Organisms → cellular organisms → Bacteria	3440	Open in IMG/M
3300019784\|Ga0181359_1011542	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3177	Open in IMG/M
3300019784\|Ga0181359_1039588	All Organisms → cellular organisms → Bacteria → PVC group	1825	Open in IMG/M
3300019784\|Ga0181359_1092217	Not Available	1121	Open in IMG/M
3300019784\|Ga0181359_1098042	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300019784\|Ga0181359_1128381	Not Available	897	Open in IMG/M
3300019784\|Ga0181359_1187047	Not Available	678	Open in IMG/M
3300019784\|Ga0181359_1207364	Not Available	626	Open in IMG/M
3300019784\|Ga0181359_1256391	All Organisms → cellular organisms → Bacteria → PVC group	527	Open in IMG/M
3300021963\|Ga0222712_10323563	Not Available	959	Open in IMG/M
3300022190\|Ga0181354_1014890	All Organisms → cellular organisms → Bacteria → PVC group	2378	Open in IMG/M
3300022190\|Ga0181354_1044113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300022190\|Ga0181354_1071622	Not Available	1149	Open in IMG/M
3300022752\|Ga0214917_10019608	All Organisms → cellular organisms → Bacteria	5609	Open in IMG/M
3300022752\|Ga0214917_10020381	All Organisms → cellular organisms → Bacteria	5467	Open in IMG/M
3300022752\|Ga0214917_10027107	All Organisms → cellular organisms → Bacteria	4433	Open in IMG/M
3300023174\|Ga0214921_10002465	Not Available	29971	Open in IMG/M
3300023174\|Ga0214921_10010146	All Organisms → cellular organisms → Bacteria	11721	Open in IMG/M
3300023174\|Ga0214921_10036231	All Organisms → cellular organisms → Bacteria	4686	Open in IMG/M
3300023174\|Ga0214921_10078730	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	2624	Open in IMG/M
3300025896\|Ga0208916_10283004	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300026837\|Ga0209856_1003831	Not Available	705	Open in IMG/M
3300026902\|Ga0209851_1031143	Not Available	530	Open in IMG/M
3300027563\|Ga0209552_1071547	Not Available	956	Open in IMG/M
3300027581\|Ga0209651_1150482	Not Available	631	Open in IMG/M
3300027608\|Ga0208974_1012344	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	2750	Open in IMG/M
3300027656\|Ga0209357_1023345	Not Available	2143	Open in IMG/M
3300027656\|Ga0209357_1031648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1766	Open in IMG/M
3300027656\|Ga0209357_1039205	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1542	Open in IMG/M
3300027659\|Ga0208975_1088039	Not Available	912	Open in IMG/M
3300027659\|Ga0208975_1118105	Not Available	758	Open in IMG/M
3300027734\|Ga0209087_1003113	All Organisms → cellular organisms → Bacteria	9171	Open in IMG/M
3300027741\|Ga0209085_1000900	All Organisms → cellular organisms → Bacteria	19797	Open in IMG/M
3300027747\|Ga0209189_1018600	All Organisms → cellular organisms → Bacteria	3776	Open in IMG/M
3300027759\|Ga0209296_1019813	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	3847	Open in IMG/M
3300027763\|Ga0209088_10004298	All Organisms → cellular organisms → Bacteria	8324	Open in IMG/M
3300027763\|Ga0209088_10054789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1925	Open in IMG/M
3300027782\|Ga0209500_10015809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Ruficoccus	4502	Open in IMG/M
3300027798\|Ga0209353_10198892	All Organisms → cellular organisms → Bacteria → PVC group	879	Open in IMG/M
3300027963\|Ga0209400_1000706	All Organisms → cellular organisms → Bacteria	28849	Open in IMG/M
3300027963\|Ga0209400_1006174	All Organisms → cellular organisms → Bacteria	8100	Open in IMG/M
3300027971\|Ga0209401_1024700	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300031707\|Ga0315291_10404710	Not Available	1297	Open in IMG/M
3300031707\|Ga0315291_10749084	All Organisms → cellular organisms → Bacteria → PVC group	859	Open in IMG/M
3300031707\|Ga0315291_11476444	Not Available	537	Open in IMG/M
3300031746\|Ga0315293_10281513	Not Available	1340	Open in IMG/M
3300031746\|Ga0315293_10902498	Not Available	638	Open in IMG/M
3300031885\|Ga0315285_10374438	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1030	Open in IMG/M
3300031885\|Ga0315285_10398083	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300031952\|Ga0315294_10056287	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	4170	Open in IMG/M
3300031952\|Ga0315294_10899625	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031999\|Ga0315274_10700373	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300032053\|Ga0315284_10462175	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1549	Open in IMG/M
3300032173\|Ga0315268_11161553	Not Available	781	Open in IMG/M
3300032177\|Ga0315276_10592892	Not Available	1191	Open in IMG/M
3300032256\|Ga0315271_10956748	Not Available	739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.37%
Terrestrial	Environmental → Terrestrial	2.63%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	89.47%
Marine	Environmental → Aquatic → Marine	7.89%
Soil	Environmental → Terrestrial → Soil	2.63%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	53.51%
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.09%
Coastal	Environmental → Aquatic → Marine → Coastal	4.39%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.63%
Sand	Environmental → Terrestrial → Soil → Sand	2.63%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	41.23%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	35.09%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	12.28%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.39%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	28.95%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.89%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.26%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.39%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.51%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.63%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.88%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006005	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_25-Nov-14	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011334	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012728	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES043 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026837	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_25-Nov-14 (SPAdes)	Environmental	Open in IMG/M
3300026902	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_14-Oct-14 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25926J51410_10186953	3300003490	Freshwater Lake	VVSVKRLTWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
JGI25923J51411_10761301	3300003493	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0065861_10763392	3300004448	Marine	MSVKRLTWQIEILERAKKSLFDGRLVIARSRLDMALHIAKELLKRAKAYQKRDMDTKAVGKESK*
Ga0049081_100092287	3300005581	Freshwater Lentic	MSVKRITWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0049081_100405546	3300005581	Freshwater Lentic	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKR
Ga0049081_100659135	3300005581	Freshwater Lentic	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0073910_10070892	3300006005	Sand	MSVKRLTWQIEILDRAKKSLIDGRLVIARSRLDMALHIAKELLKRAQAYQKRDAEKKK*
Ga0075464_1000447713	3300006805	Aqueous	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0075464_100329453	3300006805	Aqueous	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0075464_102368575	3300006805	Aqueous	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKR
Ga0102828_11411912	3300007559	Estuarine	VVSVKRLTWQIEILERAKKSLIDGRVVVTRCRLDLALHIAKEMLKRAQVYQKRDAEKKK*
Ga0102829_10823292	3300009026	Estuarine	MSVKRLTWLIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0102829_11796013	3300009026	Estuarine	MSVKRLTWLIEILERAKKSLADGRVVVTRCRLDLALHIAREMLKRAQVYQKRDAEKKK*
Ga0114973_1000788511	3300009068	Freshwater Lake	VVSVKRLTWQIEILERAKKSLADGRVVVSRCRIDLALHIAKEMLKRAKVYQKRDLEKKK*
Ga0114973_100607393	3300009068	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLIMARSRLDIALHIAKELLKRAQTYQKRDLEKKK*
Ga0114962_102965483	3300009151	Freshwater Lake	VKRLTWQIEILERAKKSLIDGRLIMARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0114980_100450063	3300009152	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLVMARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0114963_100045106	3300009154	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLIMARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0114963_104378392	3300009154	Freshwater Lake	MSVKRITWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDLDKKK*
Ga0114968_100043068	3300009155	Freshwater Lake	MSVKRLAWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQTYQKRDLEKKK*
Ga0114968_1000729015	3300009155	Freshwater Lake	VGNGAVVSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDLEKKK*
Ga0114977_102141022	3300009158	Freshwater Lake	MVSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDAEKKK*
Ga0114978_100107607	3300009159	Freshwater Lake	MSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDLEKKK*
Ga0114981_106023401	3300009160	Freshwater Lake	MSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDLEKKK*
Ga0114966_103648732	3300009161	Freshwater Lake	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDAEKKK*
Ga0114970_103972443	3300009163	Freshwater Lake	VVSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDLEKKK*
Ga0114970_104261041	3300009163	Freshwater Lake	IEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQTYQKRDLEKKK*
Ga0114975_100052836	3300009164	Freshwater Lake	MVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0114979_1000651910	3300009180	Freshwater Lake	MSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDAEKKK*
Ga0114958_102916493	3300009684	Freshwater Lake	MSVKRLTWQVEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0133913_100786054	3300010885	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLIMARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0133913_104125326	3300010885	Freshwater Lake	KRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0133913_105643775	3300010885	Freshwater Lake	MSVKRLTWQVEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0133913_116642361	3300010885	Freshwater Lake	MSVKRITWQIEILERAKKSLIDGRLVVARSRLDMALHIAKELLKRAQTYQKRDLEKKK*
Ga0133913_116700013	3300010885	Freshwater Lake	MSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAQTYQKRDLEKKK*
Ga0133913_129035691	3300010885	Freshwater Lake	IEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDAEKKK*
Ga0153697_113443	3300011334	Freshwater	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQAYQKRDAEKKK*
Ga0153799_10900792	3300012012	Freshwater	GPCQSHALGNGAVVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK*
Ga0157552_12438442	3300012728	Freshwater	VVSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDLEKKK*
Ga0164295_103903341	3300013014	Freshwater	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQAYQKRDAEKKK*
Ga0177922_104288832	3300013372	Freshwater	SVKRITWQIEILERAKKSLADGRVVVTRCRIDLALHIAKELLKRAQTYQKRDAEKKK*
Ga0181364_10063891	3300017701	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLGIALHIAKELLKRAQTYQKRDAEQKQC
Ga0181356_10393763	3300017761	Freshwater Lake	MGNGAVVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEEKK
Ga0181356_12312611	3300017761	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAE
Ga0181358_10412844	3300017774	Freshwater Lake	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAE
Ga0181358_11373141	3300017774	Freshwater Lake	MGNGAVVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQK
Ga0181358_11534151	3300017774	Freshwater Lake	MSVKRITWQIEILERAKKSLIDGWLVIARSRLNMALHIAKELLKRAQTYQKRDAEKKK
Ga0181358_11793061	3300017774	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQK
Ga0181357_10411841	3300017777	Freshwater Lake	VSVKRLIWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181357_11775003	3300017777	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAENKK
Ga0181349_12164131	3300017778	Freshwater Lake	RITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181349_12903683	3300017778	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTY
Ga0181355_10590551	3300017785	Freshwater Lake	MSVKRLTWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAENKK
Ga0181355_12404754	3300017785	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRD
Ga0187842_10341003	3300018790	Freshwater	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQAYQKRDAEKKK
Ga0187844_101582815	3300018868	Freshwater	MSVKRITWQIEILERAKKSLIDGRVVVTRCRLDLALHIAKEMLKRAQAYQKRDAEKKK
Ga0187843_101547423	3300019093	Freshwater	VVSVKRLTWQIEILERAKKSLIDGRVVVTRCRIDLALHIAKEMLKRAQAYQKRDAEKKK
Ga0181359_10063984	3300019784	Freshwater Lake	VVSVKRLTWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_10092536	3300019784	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_10115423	3300019784	Freshwater Lake	MSVKRLTWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_10395882	3300019784	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_10922174	3300019784	Freshwater Lake	MASHGVFMSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_10980421	3300019784	Freshwater Lake	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTY
Ga0181359_11283813	3300019784	Freshwater Lake	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRD
Ga0181359_11870472	3300019784	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_12073641	3300019784	Freshwater Lake	IEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181359_12563913	3300019784	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKK
Ga0222712_103235634	3300021963	Estuarine Water	MPFFCVFAVIEFMSVKRITWQIEILERAKKSLIDGRVVVTRCRLDLALHIAKEMLKRAQVYQKRDAEKKK
Ga0181354_10148904	3300022190	Freshwater Lake	VSVKRLTWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0181354_10441135	3300022190	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAENKK
Ga0181354_10716221	3300022190	Freshwater Lake	SHALGNGAVVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0214917_100196088	3300022752	Freshwater	MRESEPKMSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQTYQKRDLEKKK
Ga0214917_100203816	3300022752	Freshwater	MSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDLEKKK
Ga0214917_100271074	3300022752	Freshwater	VVSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKELLKRAQTYQKRDLEKKK
Ga0214921_1000246539	3300023174	Freshwater	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDLEKKK
Ga0214921_100101466	3300023174	Freshwater	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDLEKKK
Ga0214921_100362316	3300023174	Freshwater	MSVKRITWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDLEKKK
Ga0214921_100787302	3300023174	Freshwater	MSVKRITWQIEILERAKKSLADGRVVVTRCRIDLALHIAKELLKRAQTYQKRDLEKKK
Ga0208916_102830044	3300025896	Aqueous	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEK
Ga0209856_10038312	3300026837	Sand	MSVKRLTWQIEILDRAKKSLIDGRLVIARSRLDMALHIAKELLKRAQAYQKRDAEKKK
Ga0209851_10311431	3300026902	Sand	KRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0209552_10715471	3300027563	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTY
Ga0209651_11504821	3300027581	Freshwater Lake	MASHGVFMSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKK
Ga0208974_10123444	3300027608	Freshwater Lentic	MSVKRITWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0209357_10233453	3300027656	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDLEKKK
Ga0209357_10316485	3300027656	Freshwater Lake	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKK
Ga0209357_10392056	3300027656	Freshwater Lake	VVSVKRLTWQIEILERAKKSLLDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKK
Ga0208975_10880391	3300027659	Freshwater Lentic	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDA
Ga0208975_11181052	3300027659	Freshwater Lentic	MSVKRITWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAENKK
Ga0209087_10031136	3300027734	Freshwater Lake	MVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0209085_100090032	3300027741	Freshwater Lake	VSVKRLTWQIEILERAKKSLIDGRLIMARSRLDMALHIAKELLKRAQTYQKRDLEKKK
Ga0209189_10186004	3300027747	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLIMARSRLDMALHIAKELLKRAQTYQKRDLEKKK
Ga0209296_10198135	3300027759	Freshwater Lake	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDAEKKK
Ga0209088_100042986	3300027763	Freshwater Lake	MSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDAEKKK
Ga0209088_100547894	3300027763	Freshwater Lake	MSVKRLTWQIEILERAKKSLIDGRLVMARSRLDMALHIAKELLKRAQTYQKRDLEKKK
Ga0209500_100158095	3300027782	Freshwater Lake	MSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAKVYQKRDLEKKK
Ga0209353_101988922	3300027798	Freshwater Lake	VVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQVYQKRDAEKKK
Ga0209400_100070639	3300027963	Freshwater Lake	MSVKRLAWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQTYQKRDLEKKK
Ga0209400_10061744	3300027963	Freshwater Lake	VGNGAVVSVKRLTWQIEILERAKKSLADGRVVVTRCRIDLALHIAKEMLKRAKVYQKRDLEKKK
Ga0209401_10247003	3300027971	Freshwater Lake	MGNGAVVSVKRLTWQIEILERAKKSLIDGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0315291_104047104	3300031707	Sediment	MPFFCVFAVIEFMSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQAYQKRDLEKKK
Ga0315291_107490841	3300031707	Sediment	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDMALHIAKEMLKRAQAYQKRDAEKKK
Ga0315291_114764442	3300031707	Sediment	VVSVKRLTWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQAYQKRDAEKKK
Ga0315293_102815133	3300031746	Sediment	AMSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQAYQKRDAEKKK
Ga0315293_109024981	3300031746	Sediment	MPFFCVFAVIEFMSVKRITWQIEILERAKKSLADGRVVVTRCRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0315285_103744381	3300031885	Sediment	VSVKRLTWQIEILERAKKSLADGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0315285_103980833	3300031885	Sediment	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQAYQKRDAEKKK
Ga0315294_100562874	3300031952	Sediment	MPFFCVFAVIEFMSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQVYQKRDAEKKK
Ga0315294_108996252	3300031952	Sediment	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKELLKRAQTYQKRDAEKKK
Ga0315274_107003733	3300031999	Sediment	VVSVKRITWQIEILERAKKSLIDGRVVVTRCRLDLALHIAKEMLKRAQVYQKRDAEKKK
Ga0315284_104621754	3300032053	Sediment	VVSVKRITWQIEILERAKKSLADGRVVVTRCRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0315268_111615531	3300032173	Sediment	MPFFCVFAVIEFMSVKRITWQIEILERAKKSLADGRLVIARSRLDMALHIAKELLKRAQTYQKRDAEKKK
Ga0315276_105928924	3300032177	Sediment	MSVKRITWQIEILERAKKSLADGRVVVTRCRLDLALHIAKEMLKRAQAYQKRDLEKKK
Ga0315271_109567482	3300032256	Sediment	VVSVKRLTWQIEILERAKKSLADGRLVIARSRLDMALHIAKEMLKRALVYQKRDAEKKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081048

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences