NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F081025

Metagenome / Metatranscriptome Family F081025

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081025
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 63 residues
Representative Sequence MTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRRFVIDGGMF
Number of Associated Samples 67
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.75 %
% of genes near scaffold ends (potentially truncated) 20.18 %
% of genes from short scaffolds (< 2000 bps) 77.19 %
Associated GOLD sequencing projects 65
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (84.211 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton
(29.825 % of family members)
Environment Ontology (ENVO) Unclassified
(57.018 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(70.175 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.11%    β-sheet: 30.00%    Coil/Unstructured: 58.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF10544T5orf172 1.75
PF14192DUF4314 0.88
PF13245AAA_19 0.88
PF01580FtsK_SpoIIIE 0.88
PF13155Toprim_2 0.88
PF06067DUF932 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG1674DNA segregation ATPase FtsK/SpoIIIE or related proteinCell cycle control, cell division, chromosome partitioning [D] 0.88


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A84.21 %
All OrganismsrootAll Organisms15.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002835|B570J40625_100189591All Organisms → Viruses → Predicted Viral2252Open in IMG/M
3300002835|B570J40625_100325914All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1538Open in IMG/M
3300004240|Ga0007787_10487322Not Available616Open in IMG/M
3300006810|Ga0070754_10408941Not Available593Open in IMG/M
3300007538|Ga0099851_1120671Not Available990Open in IMG/M
3300007538|Ga0099851_1333556Not Available531Open in IMG/M
3300007539|Ga0099849_1009692Not Available4323Open in IMG/M
3300007590|Ga0102917_1330184Not Available525Open in IMG/M
3300007973|Ga0105746_1042930Not Available1406Open in IMG/M
3300007974|Ga0105747_1152586Not Available746Open in IMG/M
3300008107|Ga0114340_1000018All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales164521Open in IMG/M
3300008107|Ga0114340_1025328All Organisms → Viruses → Predicted Viral2757Open in IMG/M
3300008107|Ga0114340_1092937Not Available1885Open in IMG/M
3300008107|Ga0114340_1214048Not Available630Open in IMG/M
3300008108|Ga0114341_10395126Not Available672Open in IMG/M
3300008113|Ga0114346_1255980Not Available646Open in IMG/M
3300008113|Ga0114346_1273606Not Available606Open in IMG/M
3300008116|Ga0114350_1064073Not Available1280Open in IMG/M
3300008116|Ga0114350_1190917Not Available515Open in IMG/M
3300008117|Ga0114351_1077872Not Available1988Open in IMG/M
3300008119|Ga0114354_1043682Not Available3475Open in IMG/M
3300008120|Ga0114355_1104497Not Available1105Open in IMG/M
3300008258|Ga0114840_1006400All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2062Open in IMG/M
3300008262|Ga0114337_1114278Not Available1233Open in IMG/M
3300008262|Ga0114337_1174674Not Available904Open in IMG/M
3300008266|Ga0114363_1025239All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2570Open in IMG/M
3300008266|Ga0114363_1064780Not Available1407Open in IMG/M
3300008266|Ga0114363_1072578Not Available1304Open in IMG/M
3300008266|Ga0114363_1074616All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1279Open in IMG/M
3300008266|Ga0114363_1076112All Organisms → Viruses → Predicted Viral1262Open in IMG/M
3300008266|Ga0114363_1083126Not Available1566Open in IMG/M
3300008266|Ga0114363_1094862Not Available1698Open in IMG/M
3300008266|Ga0114363_1121885Not Available905Open in IMG/M
3300008266|Ga0114363_1168608Not Available708Open in IMG/M
3300008266|Ga0114363_1202854Not Available607Open in IMG/M
3300008266|Ga0114363_1230990Not Available538Open in IMG/M
3300008266|Ga0114363_1241999Not Available515Open in IMG/M
3300008267|Ga0114364_1023694Not Available2505Open in IMG/M
3300008267|Ga0114364_1031650Not Available2066Open in IMG/M
3300008267|Ga0114364_1040590Not Available1739Open in IMG/M
3300008267|Ga0114364_1070977Not Available1614Open in IMG/M
3300008267|Ga0114364_1102365Not Available1636Open in IMG/M
3300008267|Ga0114364_1142092Not Available677Open in IMG/M
3300008267|Ga0114364_1168773Not Available575Open in IMG/M
3300008448|Ga0114876_1159432Not Available812Open in IMG/M
3300008448|Ga0114876_1182558Not Available728Open in IMG/M
3300008448|Ga0114876_1184707Not Available722Open in IMG/M
3300008448|Ga0114876_1221184Not Available618Open in IMG/M
3300008448|Ga0114876_1253005Not Available544Open in IMG/M
3300009059|Ga0102830_1046027Not Available1329Open in IMG/M
3300009059|Ga0102830_1102000Not Available850Open in IMG/M
3300009075|Ga0105090_10205875Not Available1218Open in IMG/M
3300009086|Ga0102812_10224937All Organisms → Viruses → Predicted Viral1022Open in IMG/M
3300009180|Ga0114979_10247187Not Available1069Open in IMG/M
3300011011|Ga0139556_1001648Not Available3392Open in IMG/M
3300011995|Ga0153800_1004408Not Available1314Open in IMG/M
3300012663|Ga0157203_1026648Not Available824Open in IMG/M
3300012665|Ga0157210_1000001Not Available171535Open in IMG/M
3300013004|Ga0164293_10719180Not Available639Open in IMG/M
3300013005|Ga0164292_10906516Not Available553Open in IMG/M
(restricted) 3300013132|Ga0172372_10651731Not Available672Open in IMG/M
3300013372|Ga0177922_11330268All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1558Open in IMG/M
3300017747|Ga0181352_1142556Not Available638Open in IMG/M
3300017747|Ga0181352_1171794Not Available566Open in IMG/M
3300017747|Ga0181352_1175896Not Available557Open in IMG/M
3300017766|Ga0181343_1149065Not Available652Open in IMG/M
3300017774|Ga0181358_1207705Not Available637Open in IMG/M
3300017780|Ga0181346_1065895All Organisms → Viruses → Predicted Viral1446Open in IMG/M
3300017785|Ga0181355_1015171Not Available3376Open in IMG/M
3300018775|Ga0188848_1001601Not Available2605Open in IMG/M
3300019784|Ga0181359_1014577All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2891Open in IMG/M
3300019784|Ga0181359_1082343Not Available1204Open in IMG/M
3300020151|Ga0211736_10631773Not Available1207Open in IMG/M
3300020159|Ga0211734_11224959Not Available737Open in IMG/M
3300020162|Ga0211735_10327681All Organisms → cellular organisms → Bacteria3596Open in IMG/M
3300020172|Ga0211729_11300232All Organisms → Viruses → Predicted Viral1239Open in IMG/M
3300020183|Ga0194115_10161822Not Available1151Open in IMG/M
3300020183|Ga0194115_10348053Not Available656Open in IMG/M
3300020183|Ga0194115_10367382Not Available630Open in IMG/M
3300020506|Ga0208091_1003830Not Available2116Open in IMG/M
3300020506|Ga0208091_1004962Not Available1816Open in IMG/M
3300020515|Ga0208234_1024988Not Available686Open in IMG/M
3300022063|Ga0212029_1042537Not Available653Open in IMG/M
3300022179|Ga0181353_1000250All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage10642Open in IMG/M
3300022179|Ga0181353_1066868Not Available923Open in IMG/M
3300022190|Ga0181354_1009350Not Available2831Open in IMG/M
3300022190|Ga0181354_1074591Not Available1123Open in IMG/M
3300022407|Ga0181351_1003375All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5770Open in IMG/M
3300022407|Ga0181351_1026816Not Available2447Open in IMG/M
3300022407|Ga0181351_1036968Not Available2067Open in IMG/M
3300022407|Ga0181351_1130029Not Available933Open in IMG/M
3300023174|Ga0214921_10014864All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8948Open in IMG/M
3300023184|Ga0214919_10186635Not Available1580Open in IMG/M
3300025674|Ga0208162_1017496All Organisms → Viruses → Predicted Viral2832Open in IMG/M
3300027278|Ga0208439_1057925Not Available735Open in IMG/M
3300027972|Ga0209079_10254052Not Available598Open in IMG/M
3300031578|Ga0307376_10064594Not Available2630Open in IMG/M
3300031578|Ga0307376_10355708Not Available970Open in IMG/M
3300031669|Ga0307375_10317038Not Available994Open in IMG/M
3300031669|Ga0307375_10541743Not Available695Open in IMG/M
3300031758|Ga0315907_10012265Not Available8377Open in IMG/M
3300031758|Ga0315907_10085873Not Available2711Open in IMG/M
3300031758|Ga0315907_11243712Not Available518Open in IMG/M
3300031857|Ga0315909_10945852Not Available526Open in IMG/M
3300031951|Ga0315904_10223714Not Available1826Open in IMG/M
3300031963|Ga0315901_11015147Not Available578Open in IMG/M
3300032093|Ga0315902_10456386Not Available1130Open in IMG/M
3300033993|Ga0334994_0096511Not Available1745Open in IMG/M
3300033993|Ga0334994_0242963Not Available947Open in IMG/M
3300033994|Ga0334996_0084571Not Available1881Open in IMG/M
3300033994|Ga0334996_0488888Not Available554Open in IMG/M
3300034012|Ga0334986_0233595Not Available1009Open in IMG/M
3300034104|Ga0335031_0417570Not Available838Open in IMG/M
3300034283|Ga0335007_0460741Not Available775Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton29.82%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake16.67%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.53%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake7.02%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.14%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.14%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.26%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater4.39%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.39%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.51%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.75%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.75%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.88%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007590Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02EnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300007974Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300008262Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300009059Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703EnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300011011Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300011995Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012663Freshwater microbial communities from Indian River, Ontario, Canada - S50EnvironmentalOpen in IMG/M
3300012665Freshwater microbial communities from Talbot River, Ontario, Canada - S11EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300018775Metatranscriptome of marine microbial communities from Baltic Sea - GS679_0p8EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020515Freshwater microbial communities from Lake Mendota, WI - 27SEP2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027278Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
B570J40625_10018959163300002835FreshwaterMTVQELINELNKVENKNLKVIVQGCDPTDWVYNNEVEDVGVQNVYDDEIGYRKRFVIDGGMF*
B570J40625_10032591413300002835FreshwaterMTVQELIEVLEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVYDTEIGYRRRLVITGGMF*
Ga0007787_1048732223300004240Freshwater LakeMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0070754_1040894113300006810AqueousMTVQELINELEKVKNKNLKIVIQGCDPSDWVYNNDVEGVGIQTVYDSGIGYRKRFVIDGGMF*
Ga0099851_112067133300007538AqueousMTVKELIKVLEKVENKNLKVVVKGIDPTDYVYVNRIDKDDIDVENICIPVEDSYIIRRRLVINGGMF*
Ga0099851_133355623300007538AqueousMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0099849_100969253300007539AqueousMTVKELIEVLEKVENKNLKVVVKGIDPTDYVYVNRIDEDDIDVENICIPTEDSYIIRRRLVINGGMF*
Ga0102917_133018413300007590EstuarineEKVKNKNLKVVIQGVDPTDWVYNNEIVDIGEQNVYDNEIGYRRRFVIDGGMF*
Ga0105746_104293033300007973Estuary WaterMTVQELIDELQKVNNKNLKVVIQGSDPTDYVYYNEVECTGESNVYDEEIGYRRRFVIDGGMF*
Ga0105747_115258613300007974Estuary WaterMTVKELIEELQKIENKNLKVVVRGEDPTDYVYYNDIEISDVSVGNAFYDEGDDYRIRRRVIIDGGMF*
Ga0114340_1000018923300008107Freshwater, PlanktonMTVQELIEVLEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVGIDTGDDFIYRRRLVINGGMF*
Ga0114340_102532873300008107Freshwater, PlanktonVYKFKKIKVMTVKELIKVLEKVENQNLKVVVKGVDPTDWVYINMVDEEDVNVENVYDEEIGYRRRLVIDGGMF*
Ga0114340_109293713300008107Freshwater, PlanktonMTVQELINELQQVKNKNLKVVIQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0114340_121404833300008107Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEENVYDEEIGYRRRFVIDGGMF*
Ga0114341_1039512623300008108Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDYTYYNDIEYTSEQNVYDEEIGYRRRFVIDGGMF*
Ga0114346_125598033300008113Freshwater, PlanktonMTVQELINELEKVKNKNLKIVVQGCDPTDWVYNNDVEGVGEQNVYDEEIGYRRRFVI
Ga0114346_127360613300008113Freshwater, PlanktonMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNDVEGVGEQNVYDEEIGYRRRFVI
Ga0114350_106407333300008116Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSESNVYDEEIGYRRRFVIDGGMF*
Ga0114350_119091723300008116Freshwater, PlanktonIVYFSIIKKDKVMTVQELINELEKVKNKNLKVVIQGCDPTDWVYNNDVEDVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0114351_107787253300008117Freshwater, PlanktonVYKFKKIKVMTVKELIKVLEKVENQNLKVVVKGIDPTDWVYINMVDEEDVNVENVYDEEIGYRRRLVIDGGMF*
Ga0114354_104368293300008119Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGVDPTDWVYNNEVVDIGEQNVYDGEIGYRRRFVIDGGMF*
Ga0114355_110449723300008120Freshwater, PlanktonMTVQELIDELQKVKNKNLKVVIQGCDPTDYTYYNDIEYTSEENVYDEEIGYRRRFVIDGGMF*
Ga0114840_100640013300008258Freshwater, PlanktonMTVQELINELEKVKNKNLKIVVQGCDPTDWVYNNDVEGVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0114337_111427843300008262Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEQNVYDEEIGYRRRFVIDGGMF*
Ga0114337_117467413300008262Freshwater, PlanktonKIKVMTVKELIKVLEKVENQNLKVVVKGVDPTDWVYINMVDEEDVNVENVYDEEIGYRRRLVIDGGMF*
Ga0114363_102523953300008266Freshwater, PlanktonMTVQELINELQKVENKNLKVVVRGSDPTDYTYYNDVESVERDKVYYEEEDMYRYRFIIDAGMF*
Ga0114363_106478013300008266Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDWVYNNDVEDVGEQNVYDEEIGYRRRFVI
Ga0114363_107257833300008266Freshwater, PlanktonMTVQELINELEKVKNKNLKVVVQGCDPTEWVYNNEVEDVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0114363_107461643300008266Freshwater, PlanktonMTVQELIDELQKVKNKNLKVVIQGCDPTDYTYYNDIEYTSEENVYDEEIGYRRRFVI
Ga0114363_107611223300008266Freshwater, PlanktonMTVKELIEELQKVENKNLKVVVQGCDPTDWVYNNEVEDVGVQNVYDEEIGYRKRFVIDGGMF*
Ga0114363_108312643300008266Freshwater, PlanktonMTVKELIEKLEKVENKNLKVVVKGVDPTDWVYVNMIDEEDVNVENVYDEEIGYRRRLVIDGGMF*
Ga0114363_109486233300008266Freshwater, PlanktonVYKFKKIKVMTVKELIKVLEKVENQNLKVVVKGVDPTDWVYINMVDEEDVNVENVYDEEIGYRRRLVIDGGMFEIRKTC*
Ga0114363_112188523300008266Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDYTYYNDIEYTSEENVYDEEIGYRRRFVIDGGMF*
Ga0114363_116860813300008266Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGCDPTDWVYNNDVEDVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0114363_120285423300008266Freshwater, PlanktonMTVQELIDELQKVKNKNLKVVVQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0114363_123099013300008266Freshwater, PlanktonLINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEQNVYDEEIGYRRRFVIDGGMF*
Ga0114363_124199933300008266Freshwater, PlanktonKVMTVQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEENVYDEEIGYRRRFVIDGGMF*
Ga0114364_102369423300008267Freshwater, PlanktonMTVQELINELQQVKNKNLKVVIQGCDPTDYTYYNDVEYTSEENVYDEEIGYRR*
Ga0114364_103165053300008267Freshwater, PlanktonMTVKELIEELQKVENKNLKVVVQGCDPTDWVYNNEVEGVGVQNVYDEEIGYRKRFVIDGGMF*
Ga0114364_104059063300008267Freshwater, PlanktonMTVKELIEELQKVENKNLKIVVRGIDPTDWVYNNEVEDVGVRNVYDEEIGYRKRFVIDGGMF*
Ga0114364_107097743300008267Freshwater, PlanktonMTVKELIEELEKVKNKNLKVVVRGCDPTDWVYHNDVDGVDVENVYDEEIGYRKRFVIDGGMF*
Ga0114364_110236523300008267Freshwater, PlanktonMTVQELINELEKVKNKNLKVVIQGVDPTDWVYNNEIEGIGEKNVYDEEIGYRRRFVIDGGMF*
Ga0114364_114209223300008267Freshwater, PlanktonMTVQELINELQKVKNKNLKVVIQGCDPTDYVYYNDIEYTSEENVYDEEIGYRKRFVIDGGMF*
Ga0114364_116877323300008267Freshwater, PlanktonMTVKELIEELQKVKNKNLKIVVRGCDPTDYVYYNDVDGVDVENVYDEEIGYRRRFVIDGGMF*
Ga0114876_115943213300008448Freshwater LakeMLYSGIIKNNNMTVQELINELQKVENKNLKVVVRGTDPTNYQYNNDVEDCGVGNVYYEGLDGYRRRFVIDGGMF*
Ga0114876_118255823300008448Freshwater LakeMTVQELIEVLEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVYDTEIGYRRRLVIAGGMF*
Ga0114876_118470733300008448Freshwater LakeQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEENVYDEEIGYRRRFVIDGGMF*
Ga0114876_122118433300008448Freshwater LakeMTVQELIDELQKVKNKNLKVVIQGCDPTDYTYYNDIEYTSEQNVYDDEIGYRRRFVIDGGMF*
Ga0114876_125300513300008448Freshwater LakeQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEQNVYDEEIGYRRRFVIDGGMF*
Ga0102830_104602733300009059EstuarineMLYSDIIKKYKHMTVQELINELQKVENKNLKVVVRGSDPTDYTYYNDVESVERDKVYYEEENTYRYRFIIDGGMF*
Ga0102830_110200023300009059EstuarineMTVKELIEELQKVENKNLKIVVQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0105090_1020587543300009075Freshwater SedimentMTVQELINELEKVENKNLKIIIRGTDPTDYQYNNDVEELGVENVYYEELDGYRRRFVIDGGCF*
Ga0102812_1022493713300009086EstuarineHMTVQELINELQKVENKNLKVVVRGSDPTDYTYYNDVESVERDKVYYEEENTYRYRFIIDGGMF*
Ga0114979_1024718723300009180Freshwater LakeMTVQELINELQQVKNKNLKVVVQGCDPTDWVYNNEVEGVGVQNVYDEEIGYRKRFVIDGGMF*
Ga0139556_100164893300011011FreshwaterMTVQELIDELQKVNNKNLKVVVQGSDPTDYVYYNEVECTGESNVYDEEIGYRKRFVIDGGMF*
Ga0153800_100440823300011995FreshwaterMTVQELIEILEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVYDTEIGYRRRLVIAGGMF*
Ga0157203_102664813300012663FreshwaterMTVQELINELEKVKNKNLKIVVRGCDPTDYVYYNDVDGVDVQNVYDEEIGYRKRFVIDGGMF*
Ga0157210_1000001513300012665FreshwaterMTVQELINELNKVENKNLKVVVQGCDPTDWVYNNDVEGVGVQNVYDEEIGYRRRFVIDGGMF*
Ga0164293_1071918023300013004FreshwaterMTVQDLINELQKVENKNLKVVIRGMDSHDFYYHNGIEDCEVGNVYYEDLDGYRRRFIIDGGMFGEMF*
Ga0164292_1090651623300013005FreshwaterMTVQELINELEKVKNKNLKVVIQGCDPTDWVYNNDVEGVGEQNVYDEEIGYRRRFVIDGGMF*
(restricted) Ga0172372_1065173123300013132FreshwaterMTVKELIEELEKVKNKNLKIVVRGSDPTDWVYYNDVDGVGEQNVYDEEIGYRRRFVIDGGMF*
Ga0177922_1133026863300013372FreshwaterMTVQELIEILEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVYDTEIGYRRRLVITGGMF*
Ga0181352_114255613300017747Freshwater LakeMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRR
Ga0181352_117179413300017747Freshwater LakeNNNNMTVQDLINELQKVENKNLKVVIRGTDPTDYTYYNDVEGCDREKVYNEEEDTYRYRFVIDGGMF
Ga0181352_117589613300017747Freshwater LakeMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRRFVID
Ga0181343_114906533300017766Freshwater LakeMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFV
Ga0181358_120770513300017774Freshwater LakeMTVQELINELEKIKNKNLKVVIQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRRFEIDGGMF
Ga0181346_106589523300017780Freshwater LakeMTVQDLINELNKVENKNLKVVVQGCDPTDYTYYNDVEGVGVENVFDDEIGYRRRFVIDGGMF
Ga0181355_1015171113300017785Freshwater LakeMTVKELIEELQKVKNKNLKIVVRGCDPTDYVYYNDVDGVDVENVYDEEIGYRRRFVIDGGMF
Ga0188848_100160123300018775Freshwater LakeMTVKELIEELQKVENKNLKVVVQGYDPTDWIYNNEVEGVGVQNVYDEVIGFRRRFVIDGGMF
Ga0181359_101457713300019784Freshwater LakeKVMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRRFVIDGGMF
Ga0181359_108234343300019784Freshwater LakeMTVKELIEELEKVKNKNLKVVVRGCDPTDWVYHNDVDGVDVENVYDEEIGYRKRFVIDGGMF
Ga0211736_1063177343300020151FreshwaterMTVKELIEELEKVENKNLKIVVRGIDPTDWVYNNEVEDVGVRNVYDEEIGYRKRFVIDGGMF
Ga0211734_1122495923300020159FreshwaterMTVQELIEVLEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVGIDTGDDFIYRRRLVINGGMF
Ga0211735_1032768113300020162FreshwaterININNLKLKVMTVQELINELEKVKNKNLKVVIQGVDPTDWVYNNEIEDIGEKNVYDEVIGYRRRFVIDGGMF
Ga0211729_1130023213300020172FreshwaterCIIKKIKKMTVKELIEELEKVENKNLEIVVRGIDPTDWVYNNEVEDVGVRNVYDEEIGYRKRFVIDGGMF
Ga0194115_1016182243300020183Freshwater LakeMTVKELIEELQKVENKNLKVVVQGYDPTDWIYNNEVEGVGVQNVYDEEIGYRRRFVIDGGMF
Ga0194115_1034805323300020183Freshwater LakeMTVKELIEELQKVENKNLKVVVQGYDPTDWIYNNEVEGVGVQSVYDEEIGYRRRFVIDGGMF
Ga0194115_1036738223300020183Freshwater LakeMTVKELIEELQKVENKNLKVVIQGCDPTDWVYNNEVEGVGIQNVYDEEIGYRRRFVIDGGMF
Ga0208091_100383043300020506FreshwaterMTVQELINELNKVENKNLKVIVQGCDPTDWVYNNEVEDVGVQNVYDDEIGYRKRFVIDGGMF
Ga0208091_100496233300020506FreshwaterMTVQELIEVLEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVYDTEIGYRRRLVITGGMF
Ga0208234_102498833300020515FreshwaterLNKVENKNLKVIVQGCDPTDWVYNNEVEDVGVQNVYDDEIGYRKRFVIDGGMF
Ga0212029_104253723300022063AqueousMTVKELIKVLEKVENKNLKVVVKGIDPTDYVYVNRIDKDDIDVENICIPVEDSYIIRRRLVINGGMF
Ga0181353_1000250173300022179Freshwater LakeMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEDVGEQNVYDEEIGYRRRFVIDGGMF
Ga0181353_106686813300022179Freshwater LakeMTVQELINKLQEVENKNLKVIIRGTDPTDYTYYNDVEGCDREKVYNEEEDTYRYRFVIDGGMF
Ga0181354_100935083300022190Freshwater LakeMTVKELIEELEKVENKNLKVVVTGIDPTDYVYVNRIEKTDINVENVYDEEIGYRRRLVISGGMF
Ga0181354_107459133300022190Freshwater LakeMTVQELINELQQVKNKNLKVVIQGCDPTDYTYYNDVEYTSEENVYDEEIGYRRRFVIDGGMF
Ga0181351_1003375103300022407Freshwater LakeMTVKELIKKLEKVENQNLKVVVKGVDPTDWVYINMIGEEDVNVKNVYDEEIGYRRRLVIDGGLF
Ga0181351_102681623300022407Freshwater LakeMTVKELIEELEKVENKNLKIVVTGIDPTDYVYVNRIEKTDINVENVYDEEIGYRRRLVISGGMF
Ga0181351_103696843300022407Freshwater LakeMTVQELINELQKVKNKNLKVVIQGCDPTDYVYYNDIEYTSEENVYDEEIGYRKRFVIDGGMF
Ga0181351_113002923300022407Freshwater LakeMTVQELINELIKVENKNLKVVVQGCDPTDYTYYNDVEGIGVENVYDDEIGYRRRFVIDGGMF
Ga0214921_10014864163300023174FreshwaterMTVQELINELQQVKNKNLKVVIRGTDPTDWVYNNDVEGCGKDKVYYEDNDTYRWRFIIDGGCF
Ga0214919_1018663543300023184FreshwaterMTVQELIDELQKVNNKNLKVVIQGSDPTDYVYYNEVECTGESNVYDEEIGYRRRFVIDGGMF
Ga0208162_101749643300025674AqueousMTVKELIEVLEKVENKNLKVVVKGIDPTDYVYVNRIDEDDIDVENICIPTEDSYIIRRRLVINGGMF
Ga0208439_105792523300027278EstuarineMTVQELINELQKVENKNLKVVVRGSDPTDYTYYNDVESVERDKVYYEEENTYRYRFIIDGGMF
Ga0209079_1025405223300027972Freshwater SedimentMTVQELINELEKVENKNLKIIIRGTDPTDYQYNNDVEELGVENVYYEELDGYRRRFVIDGGCF
Ga0307376_1006459493300031578SoilMTVKELIEELQKVENKNLKVVVQGCDPTDWVYNNEVEDVGVQNVYDEEIGYRRRFVIDGGMF
Ga0307376_1035570823300031578SoilMTVQELIEELQKVNNKNLKVVIQGNDPTDWVYNNEVEDVGVKNVYDEEIGYRKRFVIDGGMF
Ga0307375_1031703823300031669SoilMTVKELIEELQKVENKNLKIVVRGIDPTDWVYNNEVEDVGVRNVYDEEIGYRKRFVIDGGMF
Ga0307375_1054174333300031669SoilMTVKELIEELQKVENKNLKIVVRGIDPTDWVYNNEVEDVGVRNVYDEEIGYRKRFVIDGG
Ga0315907_10012265213300031758FreshwaterMTVQELINELQKVENKNLKVVVRGSDPTDYTYYNDVESVERDKVYYEEEDMYRYRFIIDAGMF
Ga0315907_1008587323300031758FreshwaterMTVQELIDELQKVKNKNLKVVVQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFVIDGGMF
Ga0315907_1124371223300031758FreshwaterMTVQELINELQKVENKNLKVVVRGSDPTDYTYYNDVESVERDKVYYEEEDTYRYRFIIDAGMF
Ga0315909_1094585213300031857FreshwaterMTVQELINELQKVENKNLKVVVRGSDPTDFTYYNDVESVERDKVYYEEEDMYRYRFIIDAGMF
Ga0315904_1022371443300031951FreshwaterMTVKELIKVLEKVENQNLKVVVKGVDPTDWVYINMVDEEDVNVENVYDEEIGYRRRFVIDGGMF
Ga0315901_1101514713300031963FreshwaterMTVQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEQNVYDEEIGYRRRFVIDGGMF
Ga0315902_1045638613300032093FreshwaterMTVQELINELEKVKNKNLKVVIQGCDPTDWVYYNDIEYTSEENVYDEEIGYRRRFVIDGGMF
Ga0334994_0096511_322_5103300033993FreshwaterMTVQELINELEKVKNKNLKVVVRGCDPTDWVYNNDVEDVGEQNVYDEEIGYRRRFVIDGGMF
Ga0334994_0242963_1_1713300033993FreshwaterMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNEVEGVGEQNVYDEEIGYRRRFVI
Ga0334996_0084571_460_6513300033994FreshwaterMTVQELINELEKVENKNLKIVIRGTDPTDYQYNNDVEELGVENVYYEELDGYRRRFVIDGGCF
Ga0334996_0488888_345_5393300033994FreshwaterMTVKELIEVLEKVENKNLKVVVTGMDPTDFVYVNRIEKTDVNVENVYDTEIGYRRRLVIAGGMF
Ga0334986_0233595_175_3633300034012FreshwaterMTVKELIEELQKVENKNLKVVIKGVDPTDWVYNNKIEDVSVENVFDEEIGYRRRLVIDGGMF
Ga0335031_0417570_337_5253300034104FreshwaterMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNDVEGVGEQNVYDEEIGYRRRFVIDGGMF
Ga0335007_0460741_622_7743300034283FreshwaterMTVQELINELEKVKNKNLKVVVQGCDPTDWVYNNDVEGVGEQNVYDEEIGY


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