Metagenome Family F081016

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081016
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	125 residues
Representative Sequence	AHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDVLRSAVRFIRGLEK
Number of Associated Samples	87
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	94.74 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.877 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (22.807 % of family members)
Environment Ontology (ENVO)	Unclassified (32.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.649 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.48% β-sheet: 37.66% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.107.1.1: Ran-binding protein mog1p	d1jhsa_	1jhs	0.67736
d.312.1.1: TM1622-like	d1vr8a1	1vr8	0.67711
e.3.1.1: beta-Lactamase/D-ala carboxypeptidase	d1pyya4	1pyy	0.61603
e.3.1.0: automated matches	d6i1ha1	6i1h	0.59933
e.3.1.0: automated matches	d6hr4a2	6hr4	0.59233

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF02230	Abhydrolase_2	4.39
PF05908	Gamma_PGA_hydro	2.63
PF02687	FtsX	2.63
PF13531	SBP_bac_11	2.63
PF00884	Sulfatase	2.63
PF00528	BPD_transp_1	1.75
PF12833	HTH_18	1.75
PF04237	YjbR	1.75
PF12867	DinB_2	0.88
PF13442	Cytochrome_CBB3	0.88
PF07593	UnbV_ASPIC	0.88
PF04073	tRNA_edit	0.88
PF12704	MacB_PCD	0.88
PF13242	Hydrolase_like	0.88
PF07638	Sigma70_ECF	0.88
PF07719	TPR_2	0.88
PF00144	Beta-lactamase	0.88
PF14255	Cys_rich_CPXG	0.88
PF08818	DUF1801	0.88
PF06439	3keto-disac_hyd	0.88
PF13602	ADH_zinc_N_2	0.88
PF07859	Abhydrolase_3	0.88
PF07228	SpoIIE	0.88
PF04228	Zn_peptidase	0.88
PF05016	ParE_toxin	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG4195	Phage-related replication protein YjqB, UPF0714/DUF867 family	Mobilome: prophages, transposons [X]	2.63
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	1.75
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.88
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2321	Predicted metalloprotease	General function prediction only [R]	0.88
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.88
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.88
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.88 %
Unclassified	root	N/A	49.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.88 %
Unclassified	root	N/A	49.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.88 %
Unclassified	root	N/A	49.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.26 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8.77 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	4.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.51 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	8.77 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.75 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.88 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.77 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.75 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.88 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.77 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.88 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.77 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.75 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.88 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.77 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.75 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	0.88 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.88 %
Mesorhizobium sp. B1-1-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. B1-1-3	0.88 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.77 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.75 %
Mycobacterium sp. PS03-16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. PS03-16	0.88 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	0.88 %
Mesorhizobium sp. B1-1-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. B1-1-3	0.88 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Acidobacteria bacterium 13_1_40CM_65_14	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5401CFRUL	Not Available	503	Open in IMG/M
3300000891\|JGI10214J12806_11874959	Not Available	587	Open in IMG/M
3300000956\|JGI10216J12902_101041148	Not Available	879	Open in IMG/M
3300004114\|Ga0062593_101596631	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300004156\|Ga0062589_101214869	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300004463\|Ga0063356_102820553	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005179\|Ga0066684_10907802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300005328\|Ga0070676_11076569	Not Available	606	Open in IMG/M
3300005332\|Ga0066388_105827916	Not Available	623	Open in IMG/M
3300005332\|Ga0066388_108447541	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300005334\|Ga0068869_101196751	Not Available	668	Open in IMG/M
3300005354\|Ga0070675_102085174	Not Available	523	Open in IMG/M
3300005365\|Ga0070688_100071828	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300005365\|Ga0070688_101319403	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005367\|Ga0070667_102058957	Not Available	538	Open in IMG/M
3300005445\|Ga0070708_101345114	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300005457\|Ga0070662_100772516	Not Available	816	Open in IMG/M
3300005471\|Ga0070698_100806720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	883	Open in IMG/M
3300005540\|Ga0066697_10388024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300005543\|Ga0070672_102119811	Not Available	507	Open in IMG/M
3300005544\|Ga0070686_100501822	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005545\|Ga0070695_100651739	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005618\|Ga0068864_101571065	Not Available	662	Open in IMG/M
3300005718\|Ga0068866_10086614	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300005719\|Ga0068861_100541123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1059	Open in IMG/M
3300005843\|Ga0068860_101497257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	696	Open in IMG/M
3300006034\|Ga0066656_10909645	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300006049\|Ga0075417_10110507	Not Available	1254	Open in IMG/M
3300006844\|Ga0075428_100153527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2501	Open in IMG/M
3300006844\|Ga0075428_100350617	Not Available	1584	Open in IMG/M
3300006844\|Ga0075428_101830571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	632	Open in IMG/M
3300006845\|Ga0075421_100232803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14	2265	Open in IMG/M
3300006845\|Ga0075421_101105123	Not Available	890	Open in IMG/M
3300006845\|Ga0075421_101758741	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006845\|Ga0075421_101875175	Not Available	642	Open in IMG/M
3300006847\|Ga0075431_100238284	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300006852\|Ga0075433_11363615	Not Available	614	Open in IMG/M
3300006853\|Ga0075420_100278984	Not Available	1451	Open in IMG/M
3300006853\|Ga0075420_101318925	Not Available	620	Open in IMG/M
3300006880\|Ga0075429_100022695	All Organisms → cellular organisms → Bacteria	5440	Open in IMG/M
3300006969\|Ga0075419_10351525	Not Available	1002	Open in IMG/M
3300006969\|Ga0075419_11385141	Not Available	524	Open in IMG/M
3300006969\|Ga0075419_11436757	Not Available	516	Open in IMG/M
3300009094\|Ga0111539_12538461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	594	Open in IMG/M
3300009100\|Ga0075418_10126141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2720	Open in IMG/M
3300009100\|Ga0075418_11541013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	721	Open in IMG/M
3300009101\|Ga0105247_11506382	Not Available	549	Open in IMG/M
3300009156\|Ga0111538_12298334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. B1-1-3	677	Open in IMG/M
3300009156\|Ga0111538_12821905	Not Available	608	Open in IMG/M
3300009162\|Ga0075423_11974109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	631	Open in IMG/M
3300009553\|Ga0105249_11271423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	807	Open in IMG/M
3300009553\|Ga0105249_11382722	Not Available	776	Open in IMG/M
3300010403\|Ga0134123_11059465	Not Available	831	Open in IMG/M
3300011445\|Ga0137427_10256499	Not Available	732	Open in IMG/M
3300012228\|Ga0137459_1042276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1293	Open in IMG/M
3300012893\|Ga0157284_10272019	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012906\|Ga0157295_10334557	Not Available	542	Open in IMG/M
3300012908\|Ga0157286_10044764	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300012915\|Ga0157302_10233040	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012938\|Ga0162651_100059900	Not Available	613	Open in IMG/M
3300014325\|Ga0163163_10784360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1016	Open in IMG/M
3300014871\|Ga0180095_1069011	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300015371\|Ga0132258_13052741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1159	Open in IMG/M
3300015371\|Ga0132258_13090821	All Organisms → cellular organisms → Bacteria → Acidobacteria	1151	Open in IMG/M
3300015372\|Ga0132256_100587793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1228	Open in IMG/M
3300015372\|Ga0132256_100590885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1224	Open in IMG/M
3300015372\|Ga0132256_103101740	Not Available	559	Open in IMG/M
3300015373\|Ga0132257_101106048	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300015373\|Ga0132257_101254460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	939	Open in IMG/M
3300015374\|Ga0132255_100918432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1310	Open in IMG/M
3300015374\|Ga0132255_103650995	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300015374\|Ga0132255_104501484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300018072\|Ga0184635_10248431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704	Open in IMG/M
3300018469\|Ga0190270_10629601	Not Available	1051	Open in IMG/M
3300018481\|Ga0190271_13230237	Not Available	546	Open in IMG/M
3300019356\|Ga0173481_10151147	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300019362\|Ga0173479_10656608	Not Available	558	Open in IMG/M
3300025901\|Ga0207688_10757361	Not Available	615	Open in IMG/M
3300025910\|Ga0207684_11673018	Not Available	513	Open in IMG/M
3300025930\|Ga0207701_10346062	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300025932\|Ga0207690_11070401	Not Available	672	Open in IMG/M
3300025961\|Ga0207712_12146618	Not Available	500	Open in IMG/M
3300026118\|Ga0207675_100518823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1188	Open in IMG/M
3300026118\|Ga0207675_102327610	Not Available	549	Open in IMG/M
3300026121\|Ga0207683_12134535	Not Available	508	Open in IMG/M
3300027873\|Ga0209814_10054731	Not Available	1667	Open in IMG/M
3300027909\|Ga0209382_11124671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	809	Open in IMG/M
3300027909\|Ga0209382_11905592	Not Available	574	Open in IMG/M
3300027909\|Ga0209382_11906008	Not Available	574	Open in IMG/M
3300028381\|Ga0268264_11078917	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300028589\|Ga0247818_11003605	Not Available	590	Open in IMG/M
3300028590\|Ga0247823_10796839	Not Available	709	Open in IMG/M
3300028590\|Ga0247823_11341072	Not Available	536	Open in IMG/M
3300028876\|Ga0307286_10351840	Not Available	549	Open in IMG/M
3300031548\|Ga0307408_100223883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1536	Open in IMG/M
3300031716\|Ga0310813_10192965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. PS03-16	1665	Open in IMG/M
3300031858\|Ga0310892_11156829	Not Available	550	Open in IMG/M
3300031892\|Ga0310893_10105840	Not Available	1039	Open in IMG/M
3300031892\|Ga0310893_10340670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	644	Open in IMG/M
3300031913\|Ga0310891_10355934	Not Available	526	Open in IMG/M
3300031943\|Ga0310885_10063269	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300031943\|Ga0310885_10335803	Not Available	790	Open in IMG/M
3300031944\|Ga0310884_10201571	Not Available	1062	Open in IMG/M
3300032000\|Ga0310903_10026315	Not Available	2034	Open in IMG/M
3300032000\|Ga0310903_10407246	Not Available	694	Open in IMG/M
3300032002\|Ga0307416_100837002	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300032012\|Ga0310902_10218693	All Organisms → cellular organisms → Bacteria → Proteobacteria	1129	Open in IMG/M
3300032017\|Ga0310899_10296497	Not Available	749	Open in IMG/M
3300032017\|Ga0310899_10455240	Not Available	622	Open in IMG/M
3300032179\|Ga0310889_10640539	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300032180\|Ga0307471_101536768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	823	Open in IMG/M
3300032205\|Ga0307472_101816898	Not Available	606	Open in IMG/M
3300032211\|Ga0310896_10294246	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300034147\|Ga0364925_0169536	Not Available	797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.63%
Environmental	Environmental	47.37%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.63%
Terrestrial	Environmental → Terrestrial	43.86%
Aquatic	Environmental → Aquatic	3.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.79%
Sediment	Environmental → Aquatic → Sediment	3.51%
Floodplain	Environmental → Terrestrial → Floodplain	0.88%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.88%
Roots	Host-Associated → Plants → Roots	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.77%
Loam	Environmental → Terrestrial → Soil → Loam	7.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.51%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	14.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.75%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	22.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	14.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.51%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.88%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_01171640	2070309009	Soil	DAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGALPDSPTTVLAGDTLDVHATTRLGYSISAVATRDHQLFLVSERPTEPPDVAQDILRSAVRFIRGLEN
JGI10214J12806_118749591	3300000891	Soil	DHIACALTYPEGTAYDPARAAENLVPPFERMADAVGLSHGNYHVIDAHMCPYKGRNYAHLVIRGDGQTVSLFAERAERGALPDTPTMVLAGDALDVHATTRLGYLVSAVATRDHRIFLVSESPTDPPDLAQDILRSAVGFIRSLEK*
JGI10216J12902_1010411482	3300000956	Soil	DAHMCPYKGRNYAHVVIRGDGQTLSLFAEHAERGALPETPTTVLVGDTLDIHATTRLGYRISAVATRDHRLFLISERPIDPPDVAQDILRSAVRFIRGLEK*
Ga0062593_1015966311	3300004114	Soil	CPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLPGDALDVHATMRLGYRISAVATRDHRLFLVAERPTDPPDLSQDILRSAVRFIRGLEK*
Ga0062589_1012148692	3300004156	Soil	ESPFEHIVDAVGLSRGTYHVIDAHMCPFKGRNYAHVVIRGDGQTVSLFAEPARGALPATPTTVLAGDTLDVHATMRLGYRIAAVATRDYRIFLVSERPTDPPDLAQDILRAAVRFIRDLEK*
Ga0063356_1028205532	3300004463	Arabidopsis Thaliana Rhizosphere	HGAYDVIDAHMCPFKGRNYAHVVIRGGNGQTLSLFAERAERGVLPAAPTTVLVGDTVDVHATTRLGYRISAVATRDHRIYVVSERPTDPPDIAQEILRSAVRFIRDLEKSVGR*
Ga0066684_109078022	3300005179	Soil	NRAAQNLVPPFEQIVDVVGLSHSVYHVIDAHMCPFKGRNSAHLVIRGEGQTLSLFAERAGRGALPATPTTVLAGDALDVHATARLGYWISAVAMRDYRVFLVSERPTNPPDLAQDILRSAVRFVHGLEK*
Ga0070676_110765692	3300005328	Miscanthus Rhizosphere	DAHMCPYKGRNYAHVVIRGDGQTLSLFAERGERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTEPPDLAQDILRSAVRFIRGLEK*
Ga0066388_1058279161	3300005332	Tropical Forest Soil	YHVIDAHMCPYKGRNYAHLVIRGDGQTLSLFAERAERGALPDTRTTVLAGESLNLHATMRLGYRISAVATRDHRVFLVSERPIDPPDLAEDILRSAVRFIRGLEK*
Ga0066388_1084475412	3300005332	Tropical Forest Soil	VIDAHMCPYKGRTYAHVVIRGDRQTLSLFVEGAERGALPDTPTTVLAGDTLDLHATTRLGYQIAAVATRDHRLFLVSQRPTAPPDVAQEIVRSAVRFIRGLEN*
Ga0068869_1011967512	3300005334	Miscanthus Rhizosphere	YHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERGERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0070675_1020851741	3300005354	Miscanthus Rhizosphere	VIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLPGDALDVHATMRLGYRISAVATRDYRLFLVSERPTDPPELAQDILRSAVRFIRGLEK*
Ga0070688_1000718283	3300005365	Switchgrass Rhizosphere	APPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFTERAERGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDLSQDILRSAVRFIRGLEK*
Ga0070688_1013194031	3300005365	Switchgrass Rhizosphere	AYDPARAAENLVPPFERMADAVGLSHGNYHVIDAHMCPYKGRNYAHLVIRGDGQTVSLFAERAERGALPDTPTMVLAGDALDVHATTRLGYLVSAVATRDHRIFLVSESPTDPPDLAQDILRSAVGFIRSLEK*
Ga0070667_1020589571	3300005367	Switchgrass Rhizosphere	LAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGGLPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEQ*
Ga0070708_1013451142	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PYKGRTYAHVVIRGDGQTLSLFAERAERGALPDTPTTALAGDTLDVHATTRLGYRVSAVATREHRLFLVSQRPTDPPDLAQDILRSAVRFIRGLEK*
Ga0070662_1007725161	3300005457	Corn Rhizosphere	AAYNDSAEDHVACALTYPSDTVYDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEQ*
Ga0070698_1008067201	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DSAEDHVACALTYPSGTVYDPDRAAQNLAPPFEHIVDAVGRSHGLYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0066697_103880241	3300005540	Soil	DVVGLSHGVYHVIDAHMCPFKGRNYAHLVIRGEGQTLSLFAERAGRGALPATPTTVLAGDALDVHATARLGYRISAVAMRDYRVFLVSERPTNPPDLAQDILRSAVRFVHGLEK*
Ga0070672_1021198111	3300005543	Miscanthus Rhizosphere	VDAAAYNDSAEDHVACALTYPSDTVYDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLSQDILRSAVRFIRGLEK*
Ga0070686_1005018221	3300005544	Switchgrass Rhizosphere	YDPDRAAHNLAPPFEHIVDVVGRSHGVYHVIDAHMCPYNGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLDGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSGVRFIRGLEK*
Ga0070695_1006517391	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGGLPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0068864_1015710652	3300005618	Switchgrass Rhizosphere	YHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAQRGPLPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0068866_100866143	3300005718	Miscanthus Rhizosphere	DSAEDHVACALTYSSGTVYDPDRAAHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLSAERAEGGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEK*
Ga0068861_1005411232	3300005719	Switchgrass Rhizosphere	YDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEK*
Ga0068860_1014972572	3300005843	Switchgrass Rhizosphere	IVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLSAERAEGGALPDTPTTVLAGDAVDVHATMRLGYRISAVATRDHRLFLVTAPTEPRDLAQDILRSAVRFIRGLEK*
Ga0066656_109096452	3300006034	Soil	PPFEQIVDVVGLSHGVYHVIDAHMCPFKGRNYAHLVIRGEGQTLSLFAERAGRGALPATPTTVLAGDTLDVHATARLGYRISAVAMRDYRVFLVSERPTNPPDLAQDILRSAVRFVHGLEK*
Ga0075417_101105073	3300006049	Populus Rhizosphere	LYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK*
Ga0075428_1001535271	3300006844	Populus Rhizosphere	RAARNLVSPFEHIADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGGLPDTPMTVLAGDTLDVHATTQLGYRISAVATRNHRLFLVSERPTDPPELAEDILRSAVHFIRGLEK*
Ga0075428_1003506171	3300006844	Populus Rhizosphere	RAARNLVSPFEHIADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK*
Ga0075428_1018305711	3300006844	Populus Rhizosphere	PYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDLSQDILRSAVRFIRGLEK*
Ga0075421_1002328034	3300006845	Populus Rhizosphere	DRAAQNLVSPFEHIVDAVGLSHGVYHVIDAHMCPYKSRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTLLAGDTLDVYATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVHFIRGLEK*
Ga0075421_1011051231	3300006845	Populus Rhizosphere	VYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGALPDTPMTVLAGDTLDVHATTRLGYRISAVATRNHRLFLVSERPTDPPELAEDILRSAVRFIRGLEK*
Ga0075421_1017587411	3300006845	Populus Rhizosphere	VYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGGLPDTPMTVLAGDTLDVHATTQLGYRISAVATRNHRLFLVSERPTDPPELAEDILRSAVHFIRGLEK*
Ga0075421_1018751751	3300006845	Populus Rhizosphere	SHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK*
Ga0075431_1002382841	3300006847	Populus Rhizosphere	SHGVYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGALPDAPTTVLAGDTLNVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRDLEK*
Ga0075433_113636152	3300006852	Populus Rhizosphere	RVDAAAYSDSAEDHVSCALTYPSGTEYDPNRAAQNLAPPFEHIVDAVGRLHGHYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAAEAFDVHATTRLGYRVSAVATRDHRLFLVSERPTDPPDVSQGILLSAVRFVRGLEK*
Ga0075420_1002789841	3300006853	Populus Rhizosphere	RVDAAAYNDSAGDHIACALAYPDGTVYDPDRAAQNLVSPFEHIVDAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGALPDTPMTVLAGDTLDVHATTQLGYRISAVATRNHRLFLVSERPTDPPELAEDILRSAVHFIRGLEK*
Ga0075420_1013189252	3300006853	Populus Rhizosphere	VDAAAYNDSAEDHVACALAYYPSGTVYDPDRAARNLAPPFEHIVDAVGRSHGLYHVIDAHMCPYKGRTYAHVVIRGDGQTLSLFAERAERGALPGTPTTVLAGDALDVHATTRLGYRISAVATREHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEK*
Ga0075429_1000226951	3300006880	Populus Rhizosphere	IADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGGLPDTPMTVLAGDTLDVHATTQLGYRISAVATRNHRLFLVSERPTDPPELAEDILRSAVHFIRGLEK*
Ga0075419_103515251	3300006969	Populus Rhizosphere	DRAARNLVSPFEHIADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK*
Ga0075419_113851411	3300006969	Populus Rhizosphere	DRAARNLVSPFEHIADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDRQTLSLFAERAERGGLPDTPMTVLAGDTLDVHATTQLGYRISAVATRNHRLFLVSERPTDPPELAEDILRSAVHFIRGLEK*
Ga0075419_114367571	3300006969	Populus Rhizosphere	AVGLSHGAYRVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAADTLDVHATTRLGYRISAVATRDHRVFLVSERPTDPPDLAQGILRSAVRFIRGLEN*
Ga0111539_125384612	3300009094	Populus Rhizosphere	AIGQSYGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0075418_101261411	3300009100	Populus Rhizosphere	YHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK*
Ga0075418_115410132	3300009100	Populus Rhizosphere	GQSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0105247_115063821	3300009101	Switchgrass Rhizosphere	EDHVACALTYPSDIVYDPNRAAQNLAPPFEHIVDVVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERGERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLAQDILRSAVRFVRGLEK*
Ga0111538_122983341	3300009156	Populus Rhizosphere	GRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAADTLDVHATTRLGYRISAVATRDHRVFLVSERPTDPPDVAQGILRSAVRFIRGLEN*
Ga0111538_128219051	3300009156	Populus Rhizosphere	HYHVIDAHMCPYKGRNYAHLVIRGDGQTLSLFVEHAERGALPDTPTTVLAGEALDVHATTRLGYRVSAVATRDHRLFLVSERPTDPPDVSQGILLSAVRFIRGLDK*
Ga0075423_119741092	3300009162	Populus Rhizosphere	AEDHVACALTYYPSGTVYDPVRAAHNLAPPFEHIVEAVGQSHGLYQVIDAHMCPYKGRNYAHVVLRGDGQTLSLFAERAERGALPDTPTTVLPGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLSQGILRSAVRFIRGLEK*
Ga0105249_112714231	3300009553	Switchgrass Rhizosphere	RLLHGLIYKRGVVSIRDRRHMCPFKGRNYAQVVIRGDGQTLSLFAERAERGALPDTPTTVLPGDALDVHATTRLGYRISAVATRDHQLFLVSERPTDPPDLAQDILGSAVRFIRGLEK*
Ga0105249_113827221	3300009553	Switchgrass Rhizosphere	MCPYKGRSYAHVVIRGDGQTLSLFAERAKRGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDLSQDILRSAVRFIRGL
Ga0134123_110594651	3300010403	Terrestrial Soil	DSAEDHVACALTYPSDTVYDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDSPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEK*
Ga0137427_102564991	3300011445	Soil	AAAYDDSAEDHIACALTFPDGTAYDKLRAAKNLESPFEHIVDAVGLSHGPYHVIDAHMCPYNGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQGILRSAVRFIRGLEN*
Ga0137459_10422761	3300012228	Soil	AVGLSHGPYRVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAGRGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFLVSERPTAPPDLAQRILRSAVRFIRGLEN*
Ga0157284_102720192	3300012893	Soil	VVDAVGQSHGPYQVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAARGALPDTPTTVLPGDALDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0157295_103345571	3300012906	Soil	PDRAAHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTEPPDLAQDILRSAVRFIRGLEQ*
Ga0157286_100447642	3300012908	Soil	SHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAARGALPDTPTTVLPGDALDVHATMRLGYRISAVATRDHRLFLVAERPTDPPDLSQDILRSAVRFIRGLEK*
Ga0157302_102330402	3300012915	Soil	SCALTYPSDTVYDPNRAAQNLTPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHLVIRGDGQTVSLFAERAERGALPDTPTMVLAGDALDVHATTRLGYLVSAVATRDHRIFLVSESPTDPPDLAQDILRSAVGFIRSLEK*
Ga0162651_1000599001	3300012938	Soil	AHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDVLRSAVRFIRGLEK*
Ga0163163_107843601	3300014325	Switchgrass Rhizosphere	PSGTVYDPDRAAQNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLSAERAEGGALPDTPTTVLAGDAVDVHATMRLGYRISAVATRDHRLFLVTERPTEPRDLAQDILRSAVRFIRGLEK*
Ga0180095_10690111	3300014871	Soil	SPFEHIVDAVGLSHGPYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAGRGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQGILRSAVRFIRGLEN*
Ga0132258_130527412	3300015371	Arabidopsis Rhizosphere	HVIDAHMCPYNGRNYAHVVIRGDGQTLSVFAERAERGALPDTPTTVLAGDATLDVHATTRLGYRISAVATREHRIFVVSERPTDPLHVDQDILRAAVRFIRGLEK*
Ga0132258_130908211	3300015371	Arabidopsis Rhizosphere	ACALSYPEGTAFDPERAAQSLMPPFERIVDAVGLSHGNYRVIDAHMCPYKGRNYAHVVIRGEGQTLSLFAERADRGALPAAPTTVLAGDTLNLHATTRLGYRVSAVATRDHRLFLVSESPTDPPDLAQDILRSAVGFIRSLEK*
Ga0132256_1005877931	3300015372	Arabidopsis Rhizosphere	PFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLSQGILLSAVRFIRDLEK
Ga0132256_1005908851	3300015372	Arabidopsis Rhizosphere	DPERAAQNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGAGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYQISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0132256_1031017401	3300015372	Arabidopsis Rhizosphere	IVDAVGLSHGIYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTRTTALPGESLDVHATMRLGYRISALATREYRLFLVSERPTDPPDLAEDILRSAVRFIRGLEN*
Ga0132257_1011060481	3300015373	Arabidopsis Rhizosphere	PDRAAQSLASPFEHIVDAVGLSHGIYHVIDAHMCPYKGRNYAHLVIRGDGQTLSLFAERAERGVLPDTRTTVLPGETLDVHATMRLGYRISALATREYRLFLVSERPTDPPDLAEDILRSAVRFIRGLEN*
Ga0132257_1012544602	3300015373	Arabidopsis Rhizosphere	AYSDSAEDHVACALTYSNGTVYDPDRAAHNLAPPFEHIVDVVGQSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLSQGILLSAVRFIRDLEK*
Ga0132255_1009184322	3300015374	Arabidopsis Rhizosphere	SHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDVAQDILRSAVRFTRGLEK*
Ga0132255_1036509951	3300015374	Arabidopsis Rhizosphere	DHIACALTYPEGTEYDKDRAAQNLVAPFEHIVDAVGRSHGVYHVIDAHMCPYKGRTYAHVVIRGDRQTLSLFVEPAERGALPDTPTTVLAGDTLDVHATTRLGYQIAAAATRDHRLFLVSQRPTDPPDVAQEIFRSAVRFIRGLEN*
Ga0132255_1045014841	3300015374	Arabidopsis Rhizosphere	HGVYHVIDAHMCPFKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK*
Ga0184635_102484311	3300018072	Groundwater Sediment	FEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDMLDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDLSQGILLSAVRFIRGLEK
Ga0190270_106296012	3300018469	Soil	ALTYPEGAAYDPERAAQSLMSPFEHIVDAVGLAHGIYHVIDAHMCPYKGRNYAHVVIHGDRQTLSLFAERAARGALPDTPMAVLAGDTLDVHATMRLGYRISAVATRDYRLFLVSERPTDPPELAQDILRSAVRFIRALEK
Ga0190271_132302371	3300018481	Soil	PFEHIVDAVGRAHGIYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLYLVSERPTDPPDLAQGILRSAVRFIRGLEN
Ga0173481_101511472	3300019356	Soil	SHGVYHVIDAHMCPYKGRNYAHLVIRGDGQTVSLFAERAERGALPDTPTMVLAGDALDVHATTRLGYLVSAVATRDHRIFLVSESPTDPPDLAQDILRSAVGFIRSLEK
Ga0173479_106566081	3300019362	Soil	AAAYNDSAEDHVSCALTYPSDTVYDPNRAAQNLTPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDMLRSAVRFIRGLEK
Ga0207688_107573611	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	CALTYPSGTVYDPDRAAHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQGILGSAVRFIRGLEK
Ga0207684_116730181	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LAYPEGAAYDPDRAAQSLVSPFEHIVEAVGLTHGIYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTGLPGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK
Ga0207701_103460621	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AAYDDSAEDHVACALAYPAAAAYDADRAAQSLESPFEHIVDAVGLSRGTYHVIDAHMCPYKGRNYAHVVIRGDGQTVSLFAEPARGALPATPTTVLAGDTLDVHATMRLGYRIAAVATRDYRIFLVSERPTDPPDLAQDILRAAVRFIRDLEK
Ga0207690_110704011	3300025932	Corn Rhizosphere	EDHVACALTYPSDTVYDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDYRLFLVSERPTDPPELAQDILRSAVRFIRGLEK
Ga0207712_121466182	3300025961	Switchgrass Rhizosphere	PFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTEPPDLAQDILRSAVRFIRGLEQ
Ga0207675_1005188231	3300026118	Switchgrass Rhizosphere	CALTYPSDTVYDPDRAAHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFTERAERGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDVAQDILRSAVRFTRGLEK
Ga0207675_1023276101	3300026118	Switchgrass Rhizosphere	AYNDSAEDHVACALTYPTGTEYDANRAAQNLAPPFEHIVDAVGQSHGVYHVIDAHMCPYKGRHYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDLSQDILRSAVRFIRGLEK
Ga0207683_121345351	3300026121	Miscanthus Rhizosphere	DTVYDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFTERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK
Ga0209814_100547312	3300027873	Populus Rhizosphere	SSGTVYDPDRAAHNLAPPFEHIVDVVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK
Ga0209382_111246712	3300027909	Populus Rhizosphere	AVGQSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTQLGYRISAVATRDHRLFLVSERPTDPPDLSQDILRSAVRFIRGLEK
Ga0209382_119055922	3300027909	Populus Rhizosphere	HIADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK
Ga0209382_119060081	3300027909	Populus Rhizosphere	AHMCPYKSRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTLLAGDTLDVYATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVHFIRGLEK
Ga0268264_110789172	3300028381	Switchgrass Rhizosphere	VYDPGRAAHNLAPPFEHIVDAVGRSHGAYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFVRGLEK
Ga0247818_110036051	3300028589	Soil	DSADDHIACALTYPDGTAYDKVRAAQNLESPFEHIVDAVGLSHGLYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPATPTTVLAGDTLDVHATTRLGHRISAVATRDHRLFLVSERPIDPPDLAQDILRSAVRFIRGLEN
Ga0247823_107968391	3300028590	Soil	TAYDKVRAAQNLESPFEHIVDAVGLSHGLYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPATPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFLVSERPIDPPDLAQDILRSAVRFIRGLEN
Ga0247823_113410721	3300028590	Soil	YDPDHAAQSLVSPFEHIVDAVGLAHGSYHVVDAHMCPYKGRNYAHVVIQGERQTLSLFAERAARGALPDAPTTVLAGDTLDVHATTRLGYRISAVATRDYLLFLVSERPTDPPELAQDILRSAVRFIRGLEK
Ga0307286_103518401	3300028876	Soil	DRAAHNLAPPFEHIVDAVGRSHGVYHVIDAHMCPYKGRNYAHLVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTEPPDLAQDILRSAARFIRGLEK
Ga0307408_1002238831	3300031548	Rhizosphere	VGLSHGVYHVIDAHMCPYKGRTYAHIVIRGDNQTLSLFAERAERGALPDAPTTVLAGDMPDVHATTQLGYRISAVATRDHRLFLVSERPTDPPGVAQDILRSAVRFIRGLEK
Ga0310813_101929653	3300031716	Soil	IDAHMCPYKGRNYAHLVIRGDGQTVSLFAERAERGALPDTPTMVLAGDALDVHATTRLGYLVSAVATRDHRIFLVSESPTDPPDLAQDILRSAVGFIRSLEK
Ga0310892_111568291	3300031858	Soil	ACALTYPDGTSYDELRAAQNLESPFEHIADAVGLSHGAYRVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAEDTLDVHATTRLGYRISAVATRDHRVFLVSERPTDPPDLAQGILRSAVRFIRGLEN
Ga0310893_101058401	3300031892	Soil	PSGTVYDPDRAAQNLAPPFEHIVDAVGRSHGLYHVIDAHMCPYKGRTYAHLVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRFGYRISAVATRDHRLFLVSERPTDPPDLAQDILRSAVRFIRGLEK
Ga0310893_103406701	3300031892	Soil	NLAPPFEHIVDVVGQSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDTLDVHATTRLGYRISAVATRDHRLFFVSERPTDPPDLSQGILLSAVRFIRDLEK
Ga0310891_103559341	3300031913	Soil	ARNLVSPFEHMADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK
Ga0310885_100632692	3300031943	Soil	VYDPDRAAQNLTPPFEHIVDAVGRSHGLYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDAPTTVLAGDAVDVHATTRLGYRISAVATRDHRLFLVSERPTAPPDIAQGILVSAVRFIRGLEK
Ga0310885_103358031	3300031943	Soil	HIVDAVGRSHGLYHVIDAHMCPYKGRTYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTEPPDLAQDILRSAVRFIRGLEK
Ga0310884_102015712	3300031944	Soil	VDAAAYDDSAEDHIACALTYPDGTVYDPDRAAQNLMSPFEHIVAAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK
Ga0310903_100263151	3300032000	Soil	PFEHMADAVGLSHGVYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK
Ga0310903_104072461	3300032000	Soil	DSAGDHIACALTYPEGTAYDPARAAENLVPPFERMADAVGLSHGSYHVIDAHMCPYKGRNYAHLVIRGGGQTVSLFAERAERGALPDTPTMVLAGDALDVHATTRLGYLVSAVATRDHQIFLVSESPTDPPDLAQDILRSAVRFIRGLEK
Ga0307416_1008370022	3300032002	Rhizosphere	PYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPADLTQGILRSAARFIRGLEK
Ga0310902_102186933	3300032012	Soil	PFEHMVDAVGLSHGNYQVIDAHMCPYKGRNYAHLVIRGDGQTLSLFAERAERGALPAAPTTVLAGDTVDLHATTRLGYLVSAVATRDHRLFLVSESPTDPPDVAQDILRSAVRFIRGLEK
Ga0310899_102964971	3300032017	Soil	TYPSSTVYDPDRAAQNLTPPFEHIVDAVGRSHGLYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDAPTTVLAGDAVDVHATTRLGYRISAVATRDHRLFLVSERPTAPPDIAQGILVSAVRFIRGLEK
Ga0310899_104552401	3300032017	Soil	RVDAAAYDDSAEDHIACALTYPDGTAYDKVRAAQNLESPFEHIVDAVGLSHGLYHVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPATPTTVLAGDTLDLHATTRLGYRISAVATRDHRLFLVSERPIDPPDLAQDILRSAVRFIRGLEN
Ga0310889_106405391	3300032179	Soil	QNLASPFERIADAIGLSHGAYDVIDAHMCPYKGRNYAHVVIRGSDGETLSLFAERAERGALPAAPTTVLAGDSLPVHATTRLGYGISAVATRDHRIFLVSEKPTDPPAVAQEILRSAVRFIRGLEK
Ga0307471_1015367681	3300032180	Hardwood Forest Soil	IDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFLVSERPTEPPDLAQDILRSAVRFIRGLEK
Ga0307472_1018168981	3300032205	Hardwood Forest Soil	HVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERAERGALPDTPTTVLAGDALDVHATTRLGYRISAVATRDHRLFFVSERPTEPPDLAQDILRSAVRFIRGLEK
Ga0310896_102942461	3300032211	Soil	HVIDAHMCPYKGRNYAHVVIRGDGQTLSLFAERADRGALPDTPTTVLAGDTLDVHGTTQLGYRISAVATRNHRLFLVSERPTDPPDLGQDILRSAVRFIRGLEK
Ga0364925_0169536_6_317	3300034147	Sediment	VIDAHMCPYKGRNYAHVVIRGDRQTLSVFAERAARGALPDTPTTVLAGDTLDVHATTRLGYRIEAVATRDYRLFLVSERPTDPPEVAQDILRSAVHFIRGLEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081016

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences