Metagenome / Metatranscriptome Family F080969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080969
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	94 residues
Representative Sequence	MEARVQKSAICRDWKEVYKAALFEDDNSKIPQRIAEAERALAARATELYGASDDQIREQKAMENARYFLRVLGSTQGLLNTPGDYLQQKRVHLQTA
Number of Associated Samples	78
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.06 %
% of genes near scaffold ends (potentially truncated)	36.84 %
% of genes from short scaffolds (< 2000 bps)	75.44 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.702 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.684 % of family members)
Environment Ontology (ENVO)	Unclassified (30.702 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.912 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.87% β-sheet: 0.00% Coil/Unstructured: 41.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF11752	DUF3309	39.47
PF07920	DUF1684	6.14
PF04366	Ysc84	3.51
PF00149	Metallophos	3.51
PF00694	Aconitase_C	2.63
PF11967	RecO_N	1.75
PF00072	Response_reg	0.88
PF12732	YtxH	0.88
PF10543	ORF6N	0.88
PF00535	Glycos_transf_2	0.88
PF02776	TPP_enzyme_N	0.88
PF00821	PEPCK_GTP	0.88
PF08281	Sigma70_r4_2	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3358	Uncharacterized conserved protein, DUF1684 family	Function unknown [S]	6.14
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	3.51
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.70 %
Unclassified	root	N/A	19.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.70 %
Unclassified	root	N/A	19.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.70 %
Unclassified	root	N/A	19.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.72 %
Unclassified	root	N/A	19.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.02 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.02 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.02 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.02 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	2.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.02 %
Rhodanobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	2.63 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10157770	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300001471\|JGI12712J15308_10152210	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300002245\|JGIcombinedJ26739_101033790	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300004103\|Ga0058903_1518055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	617	Open in IMG/M
3300004152\|Ga0062386_101152340	Not Available	644	Open in IMG/M
3300004631\|Ga0058899_11988886	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300004631\|Ga0058899_12034306	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005533\|Ga0070734_10274149	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005534\|Ga0070735_10504032	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005541\|Ga0070733_10393706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300005541\|Ga0070733_10697023	Not Available	682	Open in IMG/M
3300005542\|Ga0070732_10310676	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005921\|Ga0070766_10387647	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300005921\|Ga0070766_10432873	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300006893\|Ga0073928_10010148	All Organisms → cellular organisms → Bacteria	11288	Open in IMG/M
3300006893\|Ga0073928_10852693	Not Available	627	Open in IMG/M
3300007982\|Ga0102924_1014609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6206	Open in IMG/M
3300007982\|Ga0102924_1085875	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300009522\|Ga0116218_1032792	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300009522\|Ga0116218_1410440	Not Available	604	Open in IMG/M
3300009700\|Ga0116217_10143336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300009824\|Ga0116219_10448218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300010343\|Ga0074044_10001335	All Organisms → cellular organisms → Bacteria	22464	Open in IMG/M
3300010379\|Ga0136449_100739571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1640	Open in IMG/M
3300010379\|Ga0136449_102955279	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300011120\|Ga0150983_10675175	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300011120\|Ga0150983_11927773	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300011120\|Ga0150983_12526472	Not Available	656	Open in IMG/M
3300011411\|Ga0153933_1004247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3863	Open in IMG/M
3300014489\|Ga0182018_10618577	Not Available	567	Open in IMG/M
3300014495\|Ga0182015_10005504	All Organisms → cellular organisms → Bacteria → Acidobacteria	13135	Open in IMG/M
3300014501\|Ga0182024_10178494	All Organisms → cellular organisms → Bacteria	2937	Open in IMG/M
3300014501\|Ga0182024_10915100	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300014501\|Ga0182024_11208037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300014501\|Ga0182024_11583554	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300017822\|Ga0187802_10004752	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300017822\|Ga0187802_10040844	All Organisms → cellular organisms → Bacteria → Acidobacteria	1678	Open in IMG/M
3300017823\|Ga0187818_10016853	All Organisms → cellular organisms → Bacteria	3121	Open in IMG/M
3300017924\|Ga0187820_1021800	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300017933\|Ga0187801_10100866	All Organisms → cellular organisms → Bacteria → Acidobacteria	1096	Open in IMG/M
3300017933\|Ga0187801_10488169	Not Available	519	Open in IMG/M
3300017943\|Ga0187819_10004469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7594	Open in IMG/M
3300017943\|Ga0187819_10293145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300017955\|Ga0187817_10851455	Not Available	583	Open in IMG/M
3300017995\|Ga0187816_10523251	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300018006\|Ga0187804_10024488	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300018006\|Ga0187804_10311350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300018007\|Ga0187805_10057490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1748	Open in IMG/M
3300018007\|Ga0187805_10172191	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300018007\|Ga0187805_10267115	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300020580\|Ga0210403_10344706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300020580\|Ga0210403_10778244	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300020583\|Ga0210401_10244509	All Organisms → cellular organisms → Bacteria → Acidobacteria	1653	Open in IMG/M
3300020583\|Ga0210401_10833361	Not Available	782	Open in IMG/M
3300021170\|Ga0210400_10015719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5969	Open in IMG/M
3300021171\|Ga0210405_10445948	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300021171\|Ga0210405_10893384	Not Available	676	Open in IMG/M
3300021180\|Ga0210396_10079339	All Organisms → cellular organisms → Bacteria → Proteobacteria	2980	Open in IMG/M
3300021403\|Ga0210397_11253254	Not Available	576	Open in IMG/M
3300021406\|Ga0210386_10406528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300021420\|Ga0210394_10005846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13614	Open in IMG/M
3300021420\|Ga0210394_10318853	All Organisms → cellular organisms → Bacteria → Acidobacteria	1364	Open in IMG/M
3300021420\|Ga0210394_11352308	Not Available	607	Open in IMG/M
3300021474\|Ga0210390_10008125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8635	Open in IMG/M
3300021477\|Ga0210398_10542660	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300021479\|Ga0210410_10139446	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300022528\|Ga0242669_1067530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	642	Open in IMG/M
3300022532\|Ga0242655_10329824	Not Available	504	Open in IMG/M
3300022557\|Ga0212123_10037228	All Organisms → cellular organisms → Bacteria → Acidobacteria	4789	Open in IMG/M
3300022557\|Ga0212123_10276103	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300022709\|Ga0222756_1031028	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300022709\|Ga0222756_1043991	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300022711\|Ga0242674_1035498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans	641	Open in IMG/M
3300022717\|Ga0242661_1167934	Not Available	502	Open in IMG/M
3300022722\|Ga0242657_1084574	Not Available	758	Open in IMG/M
3300022724\|Ga0242665_10171133	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300025134\|Ga0207416_1085395	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300025134\|Ga0207416_1168624	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300025320\|Ga0209171_10158697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300027684\|Ga0209626_1023784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1474	Open in IMG/M
3300027824\|Ga0209040_10063456	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300027826\|Ga0209060_10586381	Not Available	504	Open in IMG/M
3300027854\|Ga0209517_10085466	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300027869\|Ga0209579_10320317	Not Available	837	Open in IMG/M
3300027889\|Ga0209380_10448517	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300027905\|Ga0209415_10063925	All Organisms → cellular organisms → Bacteria	4478	Open in IMG/M
3300027908\|Ga0209006_10008739	All Organisms → cellular organisms → Bacteria → Acidobacteria	9148	Open in IMG/M
3300027986\|Ga0209168_10135464	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300027986\|Ga0209168_10316392	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300030659\|Ga0316363_10226147	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300030707\|Ga0310038_10065962	All Organisms → cellular organisms → Bacteria → Acidobacteria	1986	Open in IMG/M
3300030730\|Ga0307482_1096873	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300030730\|Ga0307482_1130240	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300030991\|Ga0073994_12228144	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300031047\|Ga0073995_10930387	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031090\|Ga0265760_10002822	All Organisms → cellular organisms → Bacteria → Acidobacteria	5073	Open in IMG/M
3300031708\|Ga0310686_105807804	Not Available	569	Open in IMG/M
3300031708\|Ga0310686_107235075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15118	Open in IMG/M
3300031708\|Ga0310686_109505109	Not Available	667	Open in IMG/M
3300031708\|Ga0310686_111997513	All Organisms → cellular organisms → Bacteria → Acidobacteria	1229	Open in IMG/M
3300031715\|Ga0307476_10262269	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300031715\|Ga0307476_10663230	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031718\|Ga0307474_10000021	All Organisms → cellular organisms → Bacteria → Acidobacteria	135768	Open in IMG/M
3300031718\|Ga0307474_10017334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5226	Open in IMG/M
3300031753\|Ga0307477_10348123	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300031754\|Ga0307475_10878192	Not Available	709	Open in IMG/M
3300031823\|Ga0307478_10017648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4995	Open in IMG/M
3300031823\|Ga0307478_10356952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300031962\|Ga0307479_10285690	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300032160\|Ga0311301_10160938	All Organisms → cellular organisms → Bacteria	4010	Open in IMG/M
3300032160\|Ga0311301_10516888	All Organisms → cellular organisms → Bacteria → Acidobacteria	1762	Open in IMG/M
3300032515\|Ga0348332_11662574	Not Available	593	Open in IMG/M
3300032756\|Ga0315742_12277735	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.32%
Aquatic	Environmental → Aquatic	22.81%
Fungi	Host-Associated → Fungi	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.44%
Freshwater	Environmental → Aquatic → Freshwater	14.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs	7.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.88%
Mycelium	Host-Associated → Fungi → Mycelium	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.91%
Loam	Environmental → Terrestrial → Soil → Loam	11.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	7.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.14%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.88%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.40%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	7.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.16%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	7.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.75%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.88%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.88%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101577703	3300000567	Peatlands Soil	KAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSEHVNQTQTVQSATA*
JGI12712J15308_101522102	3300001471	Forest Soil	ALFEDDSTKIPQRIAEAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNVRLQTV*
JGIcombinedJ26739_1010337901	3300002245	Forest Soil	MEARAHKSAICRDWKEVYKAALLEDDNTKIPQRIAEAENALAARALALELYGASDEQVREQRAMENARYFLRVLGSTQGMLNTPSGYVNQRPRLQTASV*
Ga0058903_15180551	3300004103	Forest Soil	WKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGLIHTSGDYLSQSRKVQLQTV*
Ga0062386_1011523401	3300004152	Bog Forest Soil	MRKSWIRRDWKDLYQAAIFEEDSSKVPHRIVEAESALAARALELSGADGDLAHEQKAMENARYFLRVLGSTAGMVNTSQRPPSQ
Ga0058899_119888861	3300004631	Forest Soil	KAALFEDDNTKIPQRIADAENALAARARELFGVSDDQSREQQAMENARYFLRVLGSTQGIGILNAPGEYVRQKPVLQSAAV*
Ga0058899_120343062	3300004631	Forest Soil	RDWKEVYKAALFEDDNTKIPQRIAEAENALAARALELFGASDDQVREQKAMENARYFLRVLGSAHGMLNASSPYVNQKPSLHPATV*
Ga0070734_102741492	3300005533	Surface Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAERALAARATELYGASDDQVREQQAMENARYFLRVLETTQGLIHTSGDYLSQSRKVQLQTA*
Ga0070735_105040321	3300005534	Surface Soil	MEARARKSAICRDWKEIYKAALFEDDNTKIPQRIADAERALAAREIELFGASDDQVREQQAMQNARYFLRVLGSTAGILNTATYARPKETVHLATM*
Ga0070733_103937062	3300005541	Surface Soil	VQKSSICRDWKEVYKAALFEDDNSKIPQRIADAERALAARATELWGASDDQIREQKAMENARYFLRVLGSTQGLLNPPADYLKQNQHVHLQTA*
Ga0070733_106970232	3300005541	Surface Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGLIHTSGDYLSQSRKVQLQTA*
Ga0070732_103106761	3300005542	Surface Soil	ALFEDDNTKIPQRIADAERALAAREIELFGASDDQVREQQAMQNARYFLRVLGSTAGILNTATYARPKETVHLATM*
Ga0070766_103876472	3300005921	Soil	MCRDWKEVYKAALLEDDNTKIPQRIADAETALAARATELYGATDDQIREQQAMENARYFLRVLGTTQGLLNTPGDYLSQKQKLHLQTA*
Ga0070766_104328731	3300005921	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIAEAERALAARATELYGASDDQTREQQAMENARYFLRVLGTTQGLLNTPSDYLNQKQNVRLQAV*
Ga0073928_1001014810	3300006893	Iron-Sulfur Acid Spring	VQKSLICRDWKEVYKAALFEDDNSKIPQRIAEAERALAARATELYGASDDQIREQKAMENARYFLRVLGSTQGLLNTPGDYLQQKRVHLQTA*
Ga0073928_108526932	3300006893	Iron-Sulfur Acid Spring	VQTSSMCRDWKEVYKAALLEDDNTKIPQRIADAETALAARATELYGATDDQIREQQAMENARYFLRVLGTTQGLLNTPGDYLSQKQKLHLQTA*
Ga0102924_10146099	3300007982	Iron-Sulfur Acid Spring	LLEIYSYFQAFGLVEARVQKSSMCRDWKEVYKAALFEDDNSKIPQRIADAEIALAARATELWGASDDQIREQKAMENARYFLRVLGSTQGLLNTPADYLKQGQHVQLQPA*
Ga0102924_10858753	3300007982	Iron-Sulfur Acid Spring	MEARVQKSAICRDWKEVYKAALFEDDNSKIPQRIADAERALAARATELYGASDDQIREQKAMENARYFLRVLGSTQGLLNTPADYLKQNQHVHLQTA*
Ga0116218_10327924	3300009522	Peatlands Soil	MTPTSRINEVGMETRMHQSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRTLELFGATDDQIREQRAMENARYFLRVLGTAQGILTTPSEHVNR
Ga0116218_14104402	3300009522	Peatlands Soil	PTSRFNEVSMDARAHKSPIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSEHVNQTQTVQSATA*
Ga0116217_101433362	3300009700	Peatlands Soil	MDARAHKSPIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSEHVNQTQTVQSATA*
Ga0116219_104482182	3300009824	Peatlands Soil	MTATSRLNEVGMETRMHQSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRALELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA*
Ga0074044_100013354	3300010343	Bog Forest Soil	MDARVHKSPIHRDWKEIYKAALFEDDNSKIAQRIAEAERALAARALELYGASDDQIREQRAMENARYFLRVLGTTQGILTTPSEHVNQRQSVHSVTA*
Ga0136449_1007395712	3300010379	Peatlands Soil	MTATSRLNEVGMETRMHKSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA*
Ga0136449_1029552792	3300010379	Peatlands Soil	ETRMHQSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRALELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA*
Ga0150983_106751753	3300011120	Forest Soil	GEVSMEARMHKSPILRDWKEVYKAALFEDDNTKIPQRIADAENALAARAQELFGVSDDQSREQQAMENARYFLRVLGSTQGILNAPNEYVRQKPVLQTAAV*
Ga0150983_119277731	3300011120	Forest Soil	CRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGLIHTSGDYLSQSRKVQLQTV*
Ga0150983_125264722	3300011120	Forest Soil	YKAALFEDDNTKIPQRIAEAERALAARALELYGASDDQGREQQAMENAKYFLRVLGNTHGMQPPPNEYVNQKQNVHLAAI*
Ga0153933_10042472	3300011411	Attine Ant Fungus Gardens	MCRDWKEVYKAALFEDDNSKIPQRIAEAESALAVRATELYGTSDDQIREQQAMENARYFLRVLGSTQGLLNTPADYLKQKQQIHLQTA*
Ga0182018_106185772	3300014489	Palsa	MCRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRATELYGASDDQIREQQAMENARYFLRVLGTSQGLLNSGDYINQKRNVQMHTA*
Ga0182015_100055049	3300014495	Palsa	MCRDWKEIYKAALFEDDNTKIPQRIADAERALAARASELYGASDDQIREQQAMENARYFLRVLGTSQGLLNSGDYINQKRNVQMHTA*
Ga0182024_101784943	3300014501	Permafrost	MCRDWKEVYKAALFEDDNSKIPQRIADAERALAARATELWGASDDQIREQKAMENARYFLRVLGSTQGLLNTPADYLKQNQHVHLQTA*
Ga0182024_109151002	3300014501	Permafrost	VQKSSVCRDWKEVYKAALFEDDNSKIPQRIADAERALAARATELYGASDDQIREQKAMENARYFLRVLGSTQGLLNTPADYLRQKQHVHLQTA*
Ga0182024_112080371	3300014501	Permafrost	MCRDWKEVYKAALFEDDNSKIPQRIADAERALAARATELWGASDDQIREQNAMENARYFLHVLGSTQGLLNTSADHLKQRQHVQLQTA*
Ga0182024_115835542	3300014501	Permafrost	ICRDWKEVYKAALLEDDNSKIPQRIADAERALAARATELYGASDDQIREQLAMENARYFLRVLGSTQGLLNTPADYLKQKQHVHLQTA*
Ga0187802_100047524	3300017822	Freshwater Sediment	METRTHKSSIRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGNTQGILTAPSEHVHQTQTVHSVTA
Ga0187802_100408441	3300017822	Freshwater Sediment	MDARVHKSPIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGATDDQIREQRAMENARYFLRVLGTTQGILISPSEHVTHTQTVQSVTA
Ga0187818_100168533	3300017823	Freshwater Sediment	METRTHKSSIRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGNTQGILTTPSEHVHQTQTVHSVTA
Ga0187820_10218002	3300017924	Freshwater Sediment	METRMHKSSVRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSKHVNQTQTVHSAAA
Ga0187801_101008661	3300017933	Freshwater Sediment	MDARVHKSPIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGATDDQIREQRAMENARYFLRVLGATQGILISPSEHVTHTQTVQS
Ga0187801_104881691	3300017933	Freshwater Sediment	VYKAALFEDDNSKIPQRIAEAERALEARALELFGAGDDQIREQQAMENARYFLRVLGSTQGMLTPREYVNHESSLHSATV
Ga0187819_100044692	3300017943	Freshwater Sediment	MEARAQKAVIHRDWKEVYKAALFEDDNSKIPQRIAEAERALEARALELFGAGDDQIREQQAMENARYFLRVLGSTQGMLTPREYVNHESSLHSATV
Ga0187819_102931452	3300017943	Freshwater Sediment	MDARVHKSPVHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGTSDDQIREQRAMENARYFLRVLGTTQGMFAGPSEDINLQSAHSVAA
Ga0187817_108514552	3300017955	Freshwater Sediment	GMETRTHKSSIRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARARELFGASDDQIREQRAMENARYFLRVLGNTQGILTAPSEHVHQTQTVHSVTA
Ga0187816_105232512	3300017995	Freshwater Sediment	RDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQQAMENARYFLRVLGNVQGILITPSEHQGQNIHLAAV
Ga0187804_100244882	3300018006	Freshwater Sediment	MDARVHKSPIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILISPSEHVTHTQTVQSVTA
Ga0187804_103113502	3300018006	Freshwater Sediment	METRTHKSSIRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSK
Ga0187805_100574902	3300018007	Freshwater Sediment	METRTHKSSIRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARARELFGASDDQIREQRAMENARYFLRVLGNTQGILTTPSEHVHQTQTVHSVTA
Ga0187805_101721911	3300018007	Freshwater Sediment	METRMHKSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSKHVNQTQTVHSAAA
Ga0187805_102671151	3300018007	Freshwater Sediment	MDARVHKSPVHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGNTQGILTTPSEHVHQTQTVHSVTA
Ga0210403_103447061	3300020580	Soil	MDARVHKSSICRNWKEVYKAALFEDDSSKIPQRIADAERALAARALELYGASDDQVREQQAMENARYFLRVLGSTAGILSAPSYSRPKETVHSAAM
Ga0210403_107782442	3300020580	Soil	MEARVQKSPICRDWKEIYKAALFEDDNTKIPQRIAEAERALAARALELYGASDDQGREQQAMENAKYFLRVLGNTHGMQPPPSEYVNQKQNVHLATI
Ga0210401_102445092	3300020583	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGLIHTSGDYLSQSRKVQLQTV
Ga0210401_108333611	3300020583	Soil	MEARVLKSPMSRDWKEVYKAALFEDDNDRIPQRIAEAEKALAARALEMFGAGGDQNHEQLAMENAKYFLRVLGSTAGTLNTPREYVGQTK
Ga0210400_100157193	3300021170	Soil	MEARAHKPPICRDWKEVYKAALFEDDNTKIPQRIAEAETALAARALELFGASDDQVREQQAMENARYFLRVLGTTQGLRNTPVEYASQKQNVHLSAM
Ga0210405_104459481	3300021171	Soil	MEARVQKSAMYRDWKEVYKAALFEDDSTKIPQRIADAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNVRLQTV
Ga0210405_108933842	3300021171	Soil	MEARAHKSPFGRDWKEVYKAALFEDDDTKIPQRIAEAENALAARALELFGASDEQVREQKAMENARYFLRVLGNTHGMLNTPSLNAPSQYVNQKPSLQAATV
Ga0210396_100793393	3300021180	Soil	MEARAHKSSACRDWKEIYKAALFEDDNTKIPQRIAEAERALAARALELFGASDEQVREQRAMENARYFLRVLGNTQGMPAPTRYSDQPQSVQLATI
Ga0210397_112532542	3300021403	Soil	MEARVLKSPMSRDWKEVYKAALFEDDNDRIPQRIAEAEKALAARALEMFGAGGDQNHEQQAMENAKYFLRVLGSTAGTLNTPREYVGQTKRSSSNR
Ga0210386_104065281	3300021406	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENARYFLRVLGTTQGLIHTSGDYLSQSRKVQLQTV
Ga0210394_100058466	3300021420	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQIREQQAMENARYFLRVLGTTQGLIHTSGDYLSQSRKIHVQTV
Ga0210394_103188532	3300021420	Soil	VQTSSMCRDWKEVYKAALLEDDNTKIPQRIADAETALAERATELYGATDDQIREQQAMENARYFLRVLGTTQGLLNTPGDYLSQKQKLHLQTA
Ga0210394_113523081	3300021420	Soil	VQKSAMYRDWKEVYKAALFEDDSTKIPQRIAEAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNIRLQTV
Ga0210390_100081254	3300021474	Soil	MEARMHKSPILRDWKEVYKAALFEDDNTKIPQRIADAENALAARAQELFGVSDDQSREQQAMENARYFLRVLGSTQGILNAPNEYVRQKPVLQTAAV
Ga0210398_103823432	3300021477	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGL
Ga0210398_105426603	3300021477	Soil	VYKAALFEDDSTKIPQRIAEAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNVRLQTV
Ga0210410_101394463	3300021479	Soil	MEARVQKSAMYRDWKEVYKAALFEDDSTKIPQRIAEAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNVRLQTV
Ga0242669_10675302	3300022528	Soil	RVQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGLIHTSGDYLSQSRKVQLQTV
Ga0242655_103298241	3300022532	Soil	VGMEARAHKSSACRDWKEIYKAALFEDDNTKIPQRIAEAERALAARALELFGASDEQVREQRAMENARYFLRVLGNTQGMPAPTRYSDQPQSVQLATI
Ga0212123_100372282	3300022557	Iron-Sulfur Acid Spring	VQKSLICRDWKEVYKAALFEDDNSKIPQRIAEAERALAARATELYGASDDQIREQKAMENARYFLRVLGSTQGLLNTPGDYLQQKRVHLQTA
Ga0212123_102761031	3300022557	Iron-Sulfur Acid Spring	LLEIYSYFQAFGLVEARVQKSSMCRDWKEVYKAALFEDDNSKIPQRIADAEIALAARATELWGASDDQIREQKAMENARYFLRVLGSTQGLLNTPADYLKQGQHVQLQPA
Ga0222756_10310281	3300022709	Soil	EVSMEARMHKSPILRDWKEVYKAALFEDDNTKIPQRIADAENALAARAQELFGVSDDQSREQQAMENARYFLRVLGSTQGILNAPNEYVRQKPVLQTAAV
Ga0222756_10439911	3300022709	Soil	WKEVYKAALFEDDSTKIPQRIADAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNIRLQTV
Ga0242674_10354982	3300022711	Soil	SSMCRDWKEVYKAALFEDDNTKIPQRIADAEIALAARATELYGASDDQVREQQAMENAKYFLRVLGTTQGLIHTSGDYLSQSRKIHVQTV
Ga0242661_11679341	3300022717	Soil	RMEARAHKSPFGRDWKEVYKAALFEDDDTKIPQRIAEAENALAARALELFGASDEQVREQKAMENARYFLRVLGNTHGMLNTPSLNAPSQYVNQKPSLQPATV
Ga0242657_10845742	3300022722	Soil	MEARVKTSSMCRDWKEVYKAALLEDDNTKIPQRIADAETALAERATELYGATDDQIREQQAMENARYFLRVLGTTQGLLNTPGDYLSQKQKLHLQTA
Ga0242665_101711332	3300022724	Soil	EVGMEARAHKSSACRDWKEIYKAALFEDDNTKIPQRIAEAERALAARALELFGASDEQVREQRAMENARYFLRVLGNTQGMPAPTRYSDQPQSVQLATI
Ga0207416_10853953	3300025134	Iron-Sulfur Acid Spring	YSYFQAFGLVEARVQKSSMCRDWKEVYKAALFEDDNSKIPQRIADAEIALAARATELWGASDDQIREQKAMENARYFLRVLGSTQGLLNTPADYLKQGQHVQLQPA
Ga0207416_11686241	3300025134	Iron-Sulfur Acid Spring	MEARVQKSAICRDWKEVYKAALFEDDNSKIPQRIAEAERALAARATELYGASDDQIREQKAMENARYFLRVLGSTQGLLNTPGDYLQQKRVHLQTA
Ga0209171_101586971	3300025320	Iron-Sulfur Acid Spring	MEARVQTSSMCRDWKEVYKAALLEDDNTKIPQRIADAETALAARATELYGATDDQIREQQAMENARYFLRVLGTTQGLLNTP
Ga0209626_10237842	3300027684	Forest Soil	MEARVQTSSMCRDWKEVYKAALLEDDNTKIPQRIADAETALAARATELYGATDDQIREQQAMENARYFLRVLGTTQGLLNTPGDYLSQKQKLHLQTA
Ga0209040_100634564	3300027824	Bog Forest Soil	MRKSWIRRDWKDLYQAAIFEEDSSKVPHRIVEAESALAARALELSGADGDLAHEQKAMENARYFLRVLGSTAGMVNTSQRPPSQRAAI
Ga0209060_105863811	3300027826	Surface Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAERALAARATELYGASDDQVREQQAMENARYFLRVLETTQGLIHTSGDYLSQSRKVQLQTA
Ga0209517_100854663	3300027854	Peatlands Soil	MDARAHKSPIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQRAMENARYFLRVLGTTQGILTTPSEHVNQTQTVQSATA
Ga0209579_103203171	3300027869	Surface Soil	MCRDWKEVYKAALFEDDNTKIPQRIADAERALAARATELYGASDDQVREQQAMENARYFLRVLETTQGLIHTSGDYLSQSRKVQLQTA
Ga0209380_104485172	3300027889	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIAEAERALAARATELYGASDDQTREQQAMENARYFLRVLGTTQGLLNTPSDYLNQKQNVRLQAV
Ga0209415_100639256	3300027905	Peatlands Soil	METRMHQSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRALELFGATDDQIREQRAMENARYFLRVLGTAQGILTTPSEHVNRTQTVHSATA
Ga0209006_100087398	3300027908	Forest Soil	VQKSAMYRDWKEVYKAALFEDDSTKIPQRIAEAENALAARATELFGASDDQIREQQAMENARYFLRVLGTTQGILKTPADYLNQRQNVRLQTV
Ga0209168_101354641	3300027986	Surface Soil	CRDWKEVYKAALFEDDNTKIPQRIADAERALAARATELYGASDDQVREQQAMENARYFLRVLETTQGLIHTSGDYLSQSRKVQLQTA
Ga0209168_103163921	3300027986	Surface Soil	MEARARKSAICRDWKEIYKAALFEDDNTKIPQRIADAERALAAREIELFGASDDQVREQQAMQNARYFLRVLGSTAGILNTATYARPKETVHLATM
Ga0316363_102261471	3300030659	Peatlands Soil	KMTATSRLNEVGMETRMHKSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRTLELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA
Ga0310038_100659622	3300030707	Peatlands Soil	METRMHKSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRALELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA
Ga0307482_10968731	3300030730	Hardwood Forest Soil	RAQKSVIHRDWKEVYKAALFEDDNTKIPQRIAEAERALAARALELFGASDDQDREQKAMENARYFLRVLGNTQGMPATREYLNHESSLHSATA
Ga0307482_11302402	3300030730	Hardwood Forest Soil	MEARAHKSSACRDWKEIYKAALFEDDNTKIPQRIAEAERALAARALELFGADDDQVREQQAMDNARYFLRVLGNTQGVLTTPRQYVNQKQNVQLATM
Ga0073994_122281443	3300030991	Soil	MEARAHKPPICRDWKEVYKAALFEDDNTKIPQRIAEAETALAARALELFDASDDQVREQQAMENARYFLRVLGTTQGLRNTPVEYASQKQNVHLSAM
Ga0073995_109303871	3300031047	Soil	ASPFYVRVSMEAGAHKPPICRDWKEVYKAALFEDDNTKIPQRIAEAETALAARALELFGASDDQVREQQAMENARYFLRVLGTTQGLRNTPVEYASQKQNVHLSAM
Ga0265760_100028223	3300031090	Soil	MEARMHKSPILRDWKEVYKAALFEDDNTKIPQRIADAENALAARARELFGVSDDQSREQQAMENARYFLRVLGSTHGMLNVPNEYVRQKPALQTAAV
Ga0310686_1058078041	3300031708	Soil	VQQSSICKDWKEIYKAALFEDDNSKIPQRIAEAERALAARATELWGASDDQIREQKAMENARYFLRVLGSTQGLLNTPAGYLQQKQHVHLQTA
Ga0310686_10723507511	3300031708	Soil	MEALMHKSPILRDWKEVYKAALFEDDNTKIPQRIADAENALAARARELFGVSDDQSREQQAMENARYFLRVLGSTQGILNAPSEYVRQKAALQTVAV
Ga0310686_1095051092	3300031708	Soil	MQARAHKSPISNDWKEIYKAALFEDDNSKIPQRIAEAERALEARALELCGASDDQVCEQKAMENAKYFLRVLGNTQGPPLSSPREYVSQKQNVQLASA
Ga0310686_1119975131	3300031708	Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIAEAERALAARATELYGASDDQTREQQAMENARYFLRVLGTTQGLLNTPGDYLNQKQNVRLQAV
Ga0307476_102622693	3300031715	Hardwood Forest Soil	VQKSSMCRDWKEVYKAALFEDDNTKIPQRIADAERALAARATELYGASDDQIREQQAMENARYFLRVLGTTQGLLTTPGDYLTQSRKVHLQTA
Ga0307476_106632302	3300031715	Hardwood Forest Soil	MEARAQKSVIHRDWKEVYKAALFEDDNTKIPQRIAEAERALAARALELFGASDDQDREQKAMENARYFLRVLGNTQGMPATREYLNHESSLHSATA
Ga0307474_10000021106	3300031718	Hardwood Forest Soil	MEARVRKSPICRDWKEIYKAALFEDDNTKIPQRIAEAERALAARALELFGADDDQVREQQAMDNARYFLRVLGNTQGVLTTPRQYVNQKQNVQLATM
Ga0307474_100173343	3300031718	Hardwood Forest Soil	MEARAQKSVIHRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGASDDQIREQQAMENARYFLRVLGNTQGMAAPREYVNHESSLHSATA
Ga0307477_103481232	3300031753	Hardwood Forest Soil	LLLRGFSEVRMEARVHKSPFGRDWKEVYKAALFEDDDTKIPQRIAEAENALAARALELFGASDEQVREQKAMENARYFLRVLGNTHGMLNTPSLNAPSQYVNQKPSLQAATV
Ga0307475_108781921	3300031754	Hardwood Forest Soil	MEARAHKSPFGRDWKEVYKAALFEDDDTKIPQRIAEAENALAARALELFGASDEQVREQKAMENARYFLRVLGSAHGMLNAPSSYVNQKPSLHPATV
Ga0307478_100176481	3300031823	Hardwood Forest Soil	MEARIHKSPIPRDWKEVYKAALFEDDNTKIPQRIADAENALAARARELFGVSDDQSREQQAMENARYFLRVLGSTQGIGILNAPGEYVRQKPVLQSAAV
Ga0307478_103569521	3300031823	Hardwood Forest Soil	MQARAHKSPISNDWKEIYKAALFEDDNSKIPQRIAEAERALEARALELCGASDDQVCEQKAMENAKYFLRVLGNTQGMMSTPLSSPRQYVGQKQN
Ga0307479_102856901	3300031962	Hardwood Forest Soil	MEARAHKSPFGRDWKEVYKAALFEDDDTKIPQRIAEAENALAARALELFGASDEQVREQKAMENARYFLRVLGNTHGMLNTPSLNAPSQYVNQKPSLQPATV
Ga0311301_101609383	3300032160	Peatlands Soil	MTATSRLNEVGMETRMHQSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAVRALELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA
Ga0311301_105168883	3300032160	Peatlands Soil	METRMHKSSLRRDWKEIYKAALFEDDNSKIPQRIAEAERALAARALELFGATDDQIREQRAMENARYFLRVLGTTQGILTSPSEHVNRTQTVHSATA
Ga0348332_116625741	3300032515	Plant Litter	EVGMEALMHKSPILRDWKEVYKAALFEDDNTKIPQRIADAENALAARARELFGVSDDQSREQQAMENARYFLRVLGSTQGILNAPSEYVRQKAALQTVAV
Ga0315742_122777352	3300032756	Forest Soil	VQKSLMCRDWKEIYKAALFEDDNSKIPQRIADAESALAARATELWGASDDQIREQQAMENARYFLRVLGSTQGLLNAPADYLKQKQHVHLQAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences