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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F080966 |
| Family Type | Metagenome |
| Number of Sequences | 114 |
| Average Sequence Length | 54 residues |
| Representative Sequence | MKQVLLSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEIL |
| Number of Associated Samples | 100 |
| Number of Associated Scaffolds | 114 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 33.33 % |
| % of genes near scaffold ends (potentially truncated) | 7.89 % |
| % of genes from short scaffolds (< 2000 bps) | 6.14 % |
| Associated GOLD sequencing projects | 96 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.65 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (92.105 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.053 % of family members) |
| Environment Ontology (ENVO) | Unclassified (31.579 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (61.404 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.69% β-sheet: 0.00% Coil/Unstructured: 42.31% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.65 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 114 Family Scaffolds |
|---|---|---|
| PF01557 | FAA_hydrolase | 19.30 |
| PF10370 | DUF2437 | 13.16 |
| PF00294 | PfkB | 0.88 |
| PF03162 | Y_phosphatase2 | 0.88 |
| PF10431 | ClpB_D2-small | 0.88 |
| PF00005 | ABC_tran | 0.88 |
| PF01039 | Carboxyl_trans | 0.88 |
| PF00227 | Proteasome | 0.88 |
| COG ID | Name | Functional Category | % Frequency in 114 Family Scaffolds |
|---|---|---|---|
| COG0638 | 20S proteasome, alpha and beta subunits | Posttranslational modification, protein turnover, chaperones [O] | 0.88 |
| COG0777 | Acetyl-CoA carboxylase beta subunit | Lipid transport and metabolism [I] | 0.88 |
| COG0825 | Acetyl-CoA carboxylase alpha subunit | Lipid transport and metabolism [I] | 0.88 |
| COG2365 | Protein tyrosine/serine phosphatase Oca4 | Signal transduction mechanisms [T] | 0.88 |
| COG3484 | Predicted proteasome-type protease | Posttranslational modification, protein turnover, chaperones [O] | 0.88 |
| COG4799 | Acetyl-CoA carboxylase, carboxyltransferase component | Lipid transport and metabolism [I] | 0.88 |
| COG5405 | ATP-dependent protease HslVU (ClpYQ), peptidase subunit | Posttranslational modification, protein turnover, chaperones [O] | 0.88 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 92.11 % |
| All Organisms | root | All Organisms | 7.89 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300002914|JGI25617J43924_10090240 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1104 | Open in IMG/M |
| 3300004080|Ga0062385_10768992 | All Organisms → cellular organisms → Bacteria | 627 | Open in IMG/M |
| 3300010361|Ga0126378_10101621 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2839 | Open in IMG/M |
| 3300018029|Ga0187787_10172589 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 747 | Open in IMG/M |
| 3300021168|Ga0210406_10986281 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 628 | Open in IMG/M |
| 3300027326|Ga0209731_1002812 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2020 | Open in IMG/M |
| 3300027846|Ga0209180_10483716 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 695 | Open in IMG/M |
| 3300031525|Ga0302326_12084820 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 729 | Open in IMG/M |
| 3300033983|Ga0371488_0103698 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1571 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 21.05% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 11.40% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 9.65% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 7.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.89% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 5.26% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.51% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.51% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.51% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.51% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.63% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.75% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.75% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.75% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.75% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.75% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 0.88% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.88% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 0.88% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.88% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.88% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.88% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 0.88% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.88% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.88% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.88% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.88% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.88% |
| Plant Roots | Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots | 0.88% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
| 3300005169 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA | Environmental | Open in IMG/M |
| 3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005533 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 | Environmental | Open in IMG/M |
| 3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
| 3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
| 3300006162 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009520 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300014165 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG | Environmental | Open in IMG/M |
| 3300014839 | Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300017823 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3 | Environmental | Open in IMG/M |
| 3300017926 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2 | Environmental | Open in IMG/M |
| 3300017937 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4 | Environmental | Open in IMG/M |
| 3300017944 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG | Environmental | Open in IMG/M |
| 3300017947 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300017961 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG | Environmental | Open in IMG/M |
| 3300017995 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1 | Environmental | Open in IMG/M |
| 3300018029 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG | Environmental | Open in IMG/M |
| 3300018057 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150 | Environmental | Open in IMG/M |
| 3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
| 3300018088 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG | Environmental | Open in IMG/M |
| 3300018090 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
| 3300020150 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Host-Associated | Open in IMG/M |
| 3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300024224 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14 | Environmental | Open in IMG/M |
| 3300025812 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes) | Environmental | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026467 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A | Environmental | Open in IMG/M |
| 3300026474 | Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T0 | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300026849 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes) | Environmental | Open in IMG/M |
| 3300026876 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes) | Environmental | Open in IMG/M |
| 3300026887 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes) | Environmental | Open in IMG/M |
| 3300026895 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes) | Environmental | Open in IMG/M |
| 3300026928 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes) | Environmental | Open in IMG/M |
| 3300027000 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes) | Environmental | Open in IMG/M |
| 3300027063 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes) | Environmental | Open in IMG/M |
| 3300027326 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027502 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027523 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes) | Environmental | Open in IMG/M |
| 3300027703 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes) | Environmental | Open in IMG/M |
| 3300027783 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027898 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes) | Environmental | Open in IMG/M |
| 3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031668 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
| 3300031798 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19 | Environmental | Open in IMG/M |
| 3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032067 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22 | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300032895 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3 | Environmental | Open in IMG/M |
| 3300032898 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1 | Environmental | Open in IMG/M |
| 3300032954 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2 | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| 3300033983 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| AF_2010_repII_A1DRAFT_100815362 | 3300000597 | Forest Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWL |
| JGI25617J43924_100902401 | 3300002914 | Grasslands Soil | MTRILASILTTLLIVAMTLAAMFTLVRATIYVTSIASPLHRAAAIAAELLLGVVLLL |
| Ga0062385_107689922 | 3300004080 | Bog Forest Soil | MKMILAFILTTVLIVAMTLTAMFTLVEATLYVTSIDSPLRRAGAIGAEL |
| Ga0066810_101445371 | 3300005169 | Soil | MKHVIASFFMVLLIVAMTLSAIAILVRATEYVTSIEHPLVRAGAIAAELLLGVILLLGTVWLA |
| Ga0066685_102775821 | 3300005180 | Soil | MKQIFLSILTTLMIVATTLSAMVILVKATLFVTSIESPLPRAGAI |
| Ga0066388_1005537891 | 3300005332 | Tropical Forest Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLA |
| Ga0066388_1006624253 | 3300005332 | Tropical Forest Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLPRAGSMAAELLLG |
| Ga0066388_1014745253 | 3300005332 | Tropical Forest Soil | MKQVILSILTTLMIVATTLSAMVILVRATLYVTSIQSPLRRAGAIAAEILLGV |
| Ga0066388_1015567343 | 3300005332 | Tropical Forest Soil | MKHVLLAILTTLLVVAMTLSAMVILVRATLYVTAIQSPLPR |
| Ga0066388_1083940031 | 3300005332 | Tropical Forest Soil | MKQVLASILTTAMIVAMTLSAMVILERATEYVTAIQSPLQRTGAIAAE |
| Ga0070734_107070781 | 3300005533 | Surface Soil | MKQFFASLLTTIMIVAMTLSAMAIIVRATLYVTAITSPL |
| Ga0070730_101617383 | 3300005537 | Surface Soil | MKQVFLSVLTTLMIVATTLSAMVILVRATLFVTSIESPLPRAGAILAEILL |
| Ga0075028_1000481284 | 3300006050 | Watersheds | MRRVFLSILTTLMIVAMTLSAMLILVQATEYVTSIESPLPRMGAIAAELLLGVVLLLGTVWLATHLA |
| Ga0075030_1005207902 | 3300006162 | Watersheds | MLCLPVGRTRAAPMKQVLASILTTLMIVAMTLSAMVILERATIYVTSIASPLPRAGAIAAEILLGVILLLGTVW |
| Ga0073928_106925611 | 3300006893 | Iron-Sulfur Acid Spring | MKQVLASFLTTLMIVAMTLSAMVIIVRATVYVTSIESPLQRAGAIGAELLLGVILLLGTVWLATHL |
| Ga0099830_115112141 | 3300009088 | Vadose Zone Soil | MLWLAGTPSLRLPMKQVFLSILTTLMIVATTLSAMVILVRATLFVTSIESPLPRAGAILAEILLGVVLLLGTVWL |
| Ga0116214_13205692 | 3300009520 | Peatlands Soil | MRQVLASILTTLMIVAMTLSAMVILERATVYVTSIASPFPRAGAIAAEILLGVVLLLGTV |
| Ga0126378_101016211 | 3300010361 | Tropical Forest Soil | MKQVLLSILTVLLIVATTLSAMVILVRATLYVTAIQSTLPRAG |
| Ga0126381_1045752461 | 3300010376 | Tropical Forest Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLL |
| Ga0137393_112595211 | 3300011271 | Vadose Zone Soil | MKQVFLSILTTLMIVATTLSAMVILVRATLFVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHAA |
| Ga0137413_102740423 | 3300012924 | Vadose Zone Soil | MKQIFLSILTTLMIVATTLSAMVILVRATLFVTSIESPLPRAGAILAEILLGVVLLLGTVWLAT |
| Ga0137419_118979761 | 3300012925 | Vadose Zone Soil | MKQVFLSILTTLMIVATTLSAMVILVRATLFVTSIESPLPRAGAILAEILLGVVLLL |
| Ga0137416_118996731 | 3300012927 | Vadose Zone Soil | MKQVFLSILTTLMIVATTLSAMVILVRATLFVTSIESPLPRAGA |
| Ga0137410_100563515 | 3300012944 | Vadose Zone Soil | MKQVFLSILTTLMIVATTLSAMVILERATLFVTSIESPLPRAGAILA |
| Ga0126369_100116071 | 3300012971 | Tropical Forest Soil | MKQVILSILTTLLIVATTLSAMVLLVRATLYVTSIQSPLARAGAIVAEILLGIVLLL |
| Ga0126369_130539802 | 3300012971 | Tropical Forest Soil | MKRVILSILTTLMIVATTLSAMVILERATLYVTSIRSPLPRAGAIAAEI |
| Ga0181523_107784022 | 3300014165 | Bog | MKQVLASVLTTLMIVAMTLSAMVILERATVYVTSIASPLPRAGAIAA |
| Ga0182027_100004331 | 3300014839 | Fen | MKQVLASILTTLMIVAMTLSAMVILERATVYVTSIASPLPRAGAIAAEILLGVILLLGTVWLATH |
| Ga0137409_100213978 | 3300015245 | Vadose Zone Soil | MKQVLLSILTTLMIVATTLSAMVILVKATLYVTSIESPLPRAGAILAEIL |
| Ga0182036_105979001 | 3300016270 | Soil | MKHALLAILTTLLIVTMTLSAMVILVRATLYVTAIHSPLPRAGAMVAELL |
| Ga0182036_106779371 | 3300016270 | Soil | MKHVLLSILTTLLIVAMTLSAMVILVRATLYVTEIDSPLKRAGAIAAEILLGVIL |
| Ga0182033_106283551 | 3300016319 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSRLPRAGAMA |
| Ga0182035_101909091 | 3300016341 | Soil | MKHVFLSICTAILIVGMTLSSILILVRATHYVTSVEPPLPRAGAIAAEL |
| Ga0182037_103033531 | 3300016404 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLPRAGAMVAELLL |
| Ga0182038_116646681 | 3300016445 | Soil | MKHVFLSILTAILIVAMTLSSMVILVRATHYVTSIESPLGRAGAIVAELLLGVILLLGTV |
| Ga0187818_104026132 | 3300017823 | Freshwater Sediment | MLWLLFCRARPALMKQVLASILATLMIVAMTLSAMVILERATVYVTSIASPLPRAGAIAAEILLGVILLLG |
| Ga0187818_104904801 | 3300017823 | Freshwater Sediment | MKHVLLSILTTLLIVAMTLSAMVILVRATLYVTAIDSPLPRAGAMAAELLLGVVLL |
| Ga0187807_12544342 | 3300017926 | Freshwater Sediment | MKHILLSILTMILVVGMTLSAMVIVVRATQYVTAIQSPLPRAG |
| Ga0187809_100859343 | 3300017937 | Freshwater Sediment | MKHVFLSILTALLIVAMTLSSMVILVRATHYVTSIESPLGRAGAMIAELLLGVILLLGTVWLA |
| Ga0187786_105865851 | 3300017944 | Tropical Peatland | MKQVFLSILTMLLIVAMTLSAMVILVRATLYVTTIDSPVSRAGAI |
| Ga0187785_100759073 | 3300017947 | Tropical Peatland | MKQFFLSILTMLLIVATTLSAMVILVRATLYVTTIDSPVSRAGAIASEILLGVILLLGTVWLAT |
| Ga0187817_100819131 | 3300017955 | Freshwater Sediment | MKHILLSVLTMILVVGMTLSAMVIVVRATQYVTAIQSPLPRAGAMAAEILLGTVLLLGTVWLATHI |
| Ga0187779_105747802 | 3300017959 | Tropical Peatland | MKHVLLSILTALLIVAMTLSAMVILVRATLYVTAIESPLSRAGAIAAEILLGVILLLG |
| Ga0187779_107786072 | 3300017959 | Tropical Peatland | MRHFLLAILTTLLIVAMTLSAMIILVRATEYVTAVESPLPRAGAI |
| Ga0187778_100136211 | 3300017961 | Tropical Peatland | MKHVLLSILTTLLIVAMTLSAMVILVRATLYVTAIRSPLQLGGAIAAEIL |
| Ga0187816_101003313 | 3300017995 | Freshwater Sediment | MKQVLASILTTLMIVALTFAAIVILERATLYVIAIESPWQRAGA |
| Ga0187787_101725891 | 3300018029 | Tropical Peatland | MKHVLLSILTTLLVVAMTLSAMVILVRATSYVTAIESPWSRAGAIAAEILLGVTLLLGTVWLATHLAV |
| Ga0187858_104797021 | 3300018057 | Peatland | MKQVLASILTTLMIVALTFAAMVILERATLYVISIDSPLQRAAAIAVEILLGIVLLLGTV |
| Ga0187772_108834131 | 3300018085 | Tropical Peatland | MKKVLASILTALMTVAMTMSAMVILERATLYVTSIASPVARATAIAAEILLGVILLLGTV |
| Ga0187769_104576663 | 3300018086 | Tropical Peatland | MKHVLASFLTALLIVAMTLSAMVILVRATLYVTSIASPLA |
| Ga0187771_103121221 | 3300018088 | Tropical Peatland | MKKVLASILTALMPVAMTMSAMVILERATLYVTSI |
| Ga0187770_104898811 | 3300018090 | Tropical Peatland | LSILTAILIVAMTLSAMVILVRATQYVTAIESPLPRAGAIAAEILLG |
| Ga0187768_10764571 | 3300020150 | Tropical Peatland | MRHVLLSILTAVLIVAMTLSAMVILVRATLYVTSIERPLARAGAMAAELLI |
| Ga0210399_109712921 | 3300020581 | Soil | MKQVILSILTTLMIVATTLSAMVILVRATLYVTSI |
| Ga0210406_109862812 | 3300021168 | Soil | MKRIFASVLTTLLIVAMTLAAMFTLVRATVYVTSIESPLQRAIAIAAELLLGVVLLLGTVWLATHL |
| Ga0210405_110090272 | 3300021171 | Soil | MKHVFLSILTAILIVAMTLSSMVILVRATHYVTAIESPLPRAGAIAAELLLGVVLLL |
| Ga0210408_103371633 | 3300021178 | Soil | MKQVFLSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATH |
| Ga0210388_104334203 | 3300021181 | Soil | MKHVFLSILTAILIVAMTLSSMVILVRATHYVTAIESPLPRAGAIAAELLLGVVLLLGTVWLA |
| Ga0213874_101999441 | 3300021377 | Plant Roots | MKQFLASLLTTIMIVAMTLSAMAILVRATLYVTAIQSPLMRAGAIVAEILLGVILLLGTVWLA |
| Ga0210386_110385041 | 3300021406 | Soil | MKQVILSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLA |
| Ga0210394_108209382 | 3300021420 | Soil | MKQVILSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGA |
| Ga0210394_110575282 | 3300021420 | Soil | MKQVILSILTTLMIVATTLSAMVILVQATLYVTSIKSPLP |
| Ga0210384_1000040163 | 3300021432 | Soil | MRRVFLSILTTFMIVAMTLSAMLILVQATEYVTSIESPLARMGAIAAELL |
| Ga0210384_102259271 | 3300021432 | Soil | MLWLAGNAGHRLPMKQVFLSILTTLMIVATTLSAMVILVRATLYVTSIESPLSRAGAILAEILLGVVLLL |
| Ga0210384_108227851 | 3300021432 | Soil | MKTILASILTTLLIVAMTLSAMFILVEATVRVTSLTSRLQRAVAICAELLLGVVLLL |
| Ga0210392_111776401 | 3300021475 | Soil | MRRVFLSILTTMMIVAMTLSAMLILVQATEYVTSIESPLARMGAIAA |
| Ga0210398_114992591 | 3300021477 | Soil | MKQIFLSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEILLGV |
| Ga0210409_103593993 | 3300021559 | Soil | MKQVFLSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLAT |
| Ga0247673_10404282 | 3300024224 | Soil | MKQFILSILTMLMVVATTLSAMVILVRATLYVTAIESPLPRA |
| Ga0208457_10493371 | 3300025812 | Peatland | MKQVLASILTTLMIVAMTLSAMVILERATVYVTSIASPLPRAGA |
| Ga0207664_107782291 | 3300025929 | Agricultural Soil | MVLLIVATTLSAMAILVRATEYVTSIEYPLARAGATAAELLLGVILLLGTVWLATHLA |
| Ga0257154_10803861 | 3300026467 | Soil | MKQIILSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEILLGVVLLLGTVWLATHA |
| Ga0247846_10430392 | 3300026474 | Soil | MLWLPFCRARPALMKQVLASILTTLMIVAMTLSAMVILERATVYVTSIASPLPRAGAIAAEILLGVILLLG |
| Ga0179587_100127156 | 3300026557 | Vadose Zone Soil | MKQFILSILTTLMIVATTLSAMVILVRATLYVTSIESP |
| Ga0207804_1076243 | 3300026849 | Tropical Forest Soil | MKHVLLSILTTVLIVSMTLSAMVILVRATLYVTEIESPLKRAGAIAAEILLGVILLLGTVWLATHLA |
| Ga0207837_10235811 | 3300026876 | Tropical Forest Soil | MKHASLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLPRAGAMVAELLLG |
| Ga0207805_10300761 | 3300026887 | Tropical Forest Soil | MKHASLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLPRAGAMVAELLLGVVLLLGTVWL |
| Ga0207758_10283031 | 3300026895 | Tropical Forest Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVIEI |
| Ga0207779_10283752 | 3300026928 | Tropical Forest Soil | MKHASLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLPRAGAMVAELLLGVVLLLGTVWLATHL |
| Ga0207803_10039685 | 3300027000 | Tropical Forest Soil | MKHVLLSILTTVLIVSMTLSAMVILVRATLYVTEIESPLKRAGAIAAEILLGVILLLGTVWLATHL |
| Ga0207762_10657891 | 3300027063 | Tropical Forest Soil | MKHVLLSILTTVLIVSMTLSAMVILVRATLYVTEIESPLKRAGAIAAEILLGVILLLGTVWLATH |
| Ga0209731_10028124 | 3300027326 | Forest Soil | MKHVLLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLARAGAV |
| Ga0209622_10412432 | 3300027502 | Forest Soil | MRHVFLSILTTVLIVAMTLSAMAILVRATLYVTAVESPLQRAGAIAAEILL |
| Ga0208890_10716612 | 3300027523 | Soil | MVLLIVAMTLSAIAILVRATEYVTSIEHPLVRAGAIAAELLLGVILLLGTVWLA |
| Ga0207862_10194491 | 3300027703 | Tropical Forest Soil | MKHVLLSILTTALIVSMTLSAMVILVRATLYVTEIE |
| Ga0209448_101527452 | 3300027783 | Bog Forest Soil | MMIVAMTLSAMLILVQATEYVTSIESPLGRAGAMAAELLLGVILLLGTVWLATHLAV |
| Ga0209448_101554342 | 3300027783 | Bog Forest Soil | MIRVIASILTTLIIVAMTLSAMVILEQATLYVTAIESPLARAGAMAA |
| Ga0209180_104837161 | 3300027846 | Vadose Zone Soil | MTRILASILTTLLIVAMTLAAMFTLVRATIYVTSIASPLHRAAAIAAELL |
| Ga0209275_107106931 | 3300027884 | Soil | MKQFLASILTTIMIVAMTLSAMAILVRATLYVTAIKSPVERAGAI |
| Ga0209067_105088561 | 3300027898 | Watersheds | MKQVLLSILTTLMIVALTMSAMAILLRATSYVTSIESPLP |
| Ga0209067_108038931 | 3300027898 | Watersheds | MKQVFLSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAIAAEILLGVVLLLGTVWL |
| Ga0209415_104337523 | 3300027905 | Peatlands Soil | MLWLRFCRARPAFMKQVLASILTTMMIVAMTLSAMVILERATLYVTSIASPLPRAGAIAAEILLGVILLLGTVWLATHL |
| Ga0170823_124198471 | 3300031128 | Forest Soil | MKQVLLSILTTLMIVATTLSAMVILVRATLYVTSIE |
| Ga0302326_120848201 | 3300031525 | Palsa | MKMICASILTTILVVAMTLGAMFILLRATLYVTAIASPLQRGAAILAELLLGVILLLGTVWLATH |
| Ga0318573_107461432 | 3300031564 | Soil | MKHVLLSILTTLLIVAMTLSAMVILVRATLYVTEIDSPLKRAGAIAAEILLGVILLLGTVWLATHL |
| Ga0318542_103671541 | 3300031668 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSRLPRAGAMAAELLLG |
| Ga0307469_100696775 | 3300031720 | Hardwood Forest Soil | MKHVIASFFMVLLIVATTLSAMAILVRATEYVTSIEYPLARAGATAAEL |
| Ga0307469_103614722 | 3300031720 | Hardwood Forest Soil | MKQVLLSILTTLMIVATTLSAMVILVRATLYVTSIESPLPRAGAILAEIL |
| Ga0318547_101502471 | 3300031781 | Soil | LAAADQANGTPMKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSPLPRAGAMAAELLL |
| Ga0318523_101204483 | 3300031798 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSPLP |
| Ga0318568_107953221 | 3300031819 | Soil | MKHVFLSICTAILIVGMTLSSILILVRATHYVTSVESPLPRAGAIAAELLLGVVLLLGTV |
| Ga0310917_106796652 | 3300031833 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIQSPLPRAGAMAAELLLGVVLLLGTVWLATH |
| Ga0306925_107149813 | 3300031890 | Soil | MKHVIASFFMVLLIVAMTLSAMAILVRATEYVTSIEYPLARAGAIAAELLLGVILLL |
| Ga0307479_117055541 | 3300031962 | Hardwood Forest Soil | MKQVILSILTMLMVVATTLSAMVILVRATLYVTSIESPLPRAG |
| Ga0306922_117171591 | 3300032001 | Soil | MKHLLLSILTTLLIVAMMLSAMVILVRTTLYVTAIQSPLPRAGAIAAEILVGVVLLLG |
| Ga0318533_107677031 | 3300032059 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIH |
| Ga0318524_106952102 | 3300032067 | Soil | MKHALLAILTTLLIVAMTLSAMVILVRATLYVTAIHSPLPRAGAMAVELLLGVVLLLGTV |
| Ga0307470_102686673 | 3300032174 | Hardwood Forest Soil | MKQVFLSILTTLMIVATTLSAMVILVRATLFVTSIESPLP |
| Ga0306920_1010513871 | 3300032261 | Soil | MKHVIASFFMVLLIVAMTLSAMAILVRATEYVTSIESPLARAGAIAA |
| Ga0335074_102785734 | 3300032895 | Soil | MKHAFLSILVALLIVAMTLSSMVILVRATHYITSIESP |
| Ga0335072_105412563 | 3300032898 | Soil | MRHVLLSMLTAVLIVAMTLSSMVILVRATHYVTAILDPL |
| Ga0335083_104104273 | 3300032954 | Soil | MKHVFLSILTALLIVAMTLSSMVILVRATHYVTGIASPLARAGAIVAEMLLGVILLLGTVWLATHLA |
| Ga0335076_102611083 | 3300032955 | Soil | MKHVFLSILTTLLVVAMTLSAMVILVRATLYVTAIASPLSRAGAIAAEIL |
| Ga0371488_0103698_2_202 | 3300033983 | Peat Soil | MLWLPFYRVRPALMKQVLASILTTLMIVAMTLSAMVILERATLYVTSIASPLPRAGAIAAEILLGVV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |