Metagenome / Metatranscriptome Family F080805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080805
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	75 residues
Representative Sequence	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Number of Associated Samples	76
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.98 %
% of genes near scaffold ends (potentially truncated)	35.96 %
% of genes from short scaffolds (< 2000 bps)	81.58 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.596 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.860 % of family members)
Environment Ontology (ENVO)	Unclassified (59.649 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.754 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.57% β-sheet: 0.00% Coil/Unstructured: 59.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF02195	ParBc	3.51
PF13356	Arm-DNA-bind_3	2.63
PF05063	MT-A70	2.63
PF13148	DUF3987	2.63
PF00589	Phage_integrase	1.75
PF07085	DRTGG	0.88
PF01593	Amino_oxidase	0.88
PF14284	PcfJ	0.88
PF13362	Toprim_3	0.88
PF13481	AAA_25	0.88
PF12307	DUF3631	0.88
PF05225	HTH_psq	0.88
PF02515	CoA_transf_3	0.88
PF00226	DnaJ	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	5.26
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.60 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	85.96 %
Unclassified	root	N/A	11.40 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	37.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.95 %
Unclassified	root	N/A	11.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	32.46 %
Unclassified	root	N/A	11.40 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	10.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Thalassobaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae	4.39 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	32.46 %
Unclassified	root	N/A	11.40 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	10.53 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Thalassobaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum	4.39 %
Fodinicurvata	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	32.46 %
Unclassified	root	N/A	11.40 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	10.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Thalassobaculum litoreum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum	4.39 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	4.39 %
Fodinicurvata fenggangensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata fenggangensis	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	32.46 %
Unclassified	root	N/A	11.40 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	10.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.26 %
Thalassobaculum litoreum DSM 18839	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	4.39 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	4.39 %
Fodinicurvata fenggangensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata fenggangensis	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0975484	Not Available	1101	Open in IMG/M
3300000955\|JGI1027J12803_104480462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1092	Open in IMG/M
3300000956\|JGI10216J12902_103445230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	995	Open in IMG/M
3300004268\|Ga0066398_10224945	Not Available	505	Open in IMG/M
3300004633\|Ga0066395_10635171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	628	Open in IMG/M
3300005332\|Ga0066388_100034529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4848	Open in IMG/M
3300005332\|Ga0066388_100081213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3615	Open in IMG/M
3300005332\|Ga0066388_100202719	All Organisms → cellular organisms → Bacteria → Proteobacteria	2605	Open in IMG/M
3300005332\|Ga0066388_101455759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1194	Open in IMG/M
3300005332\|Ga0066388_101767178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300005332\|Ga0066388_103447835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300005332\|Ga0066388_103484209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	803	Open in IMG/M
3300005332\|Ga0066388_107491868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	548	Open in IMG/M
3300005363\|Ga0008090_15062026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300005434\|Ga0070709_10131089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1712	Open in IMG/M
3300005439\|Ga0070711_100518331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300005713\|Ga0066905_100025656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3241	Open in IMG/M
3300005713\|Ga0066905_100378653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1140	Open in IMG/M
3300005713\|Ga0066905_101387126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300005764\|Ga0066903_100010352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8892	Open in IMG/M
3300005764\|Ga0066903_100107699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3802	Open in IMG/M
3300005764\|Ga0066903_100155466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3299	Open in IMG/M
3300005764\|Ga0066903_101098084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1466	Open in IMG/M
3300005764\|Ga0066903_102492625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300005764\|Ga0066903_103970288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	793	Open in IMG/M
3300005764\|Ga0066903_105344029	Not Available	678	Open in IMG/M
3300005764\|Ga0066903_105984520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	637	Open in IMG/M
3300005764\|Ga0066903_108877930	Not Available	510	Open in IMG/M
3300009156\|Ga0111538_11290283	Not Available	922	Open in IMG/M
3300010046\|Ga0126384_10437597	Not Available	1113	Open in IMG/M
3300010046\|Ga0126384_11455229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	640	Open in IMG/M
3300010047\|Ga0126382_11127775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	697	Open in IMG/M
3300010359\|Ga0126376_12189763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	597	Open in IMG/M
3300010360\|Ga0126372_12819449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	538	Open in IMG/M
3300010361\|Ga0126378_10268296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata fenggangensis	1804	Open in IMG/M
3300010366\|Ga0126379_10064891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3083	Open in IMG/M
3300010366\|Ga0126379_10289940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1636	Open in IMG/M
3300012208\|Ga0137376_11623502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	538	Open in IMG/M
3300012971\|Ga0126369_10219588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1848	Open in IMG/M
3300016270\|Ga0182036_11841834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	513	Open in IMG/M
3300016294\|Ga0182041_10274989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1383	Open in IMG/M
3300016341\|Ga0182035_10955209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	758	Open in IMG/M
3300016357\|Ga0182032_10943223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300016371\|Ga0182034_10271953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1346	Open in IMG/M
3300016371\|Ga0182034_10410801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1113	Open in IMG/M
3300016387\|Ga0182040_10031695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3103	Open in IMG/M
3300016422\|Ga0182039_10440845	Not Available	1114	Open in IMG/M
3300016445\|Ga0182038_10268674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1380	Open in IMG/M
3300021560\|Ga0126371_11237120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	882	Open in IMG/M
3300025906\|Ga0207699_10726346	Not Available	728	Open in IMG/M
3300028720\|Ga0307317_10232266	Not Available	623	Open in IMG/M
3300028768\|Ga0307280_10039862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1438	Open in IMG/M
3300028814\|Ga0307302_10433824	Not Available	651	Open in IMG/M
3300028875\|Ga0307289_10327171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300028878\|Ga0307278_10221187	Not Available	842	Open in IMG/M
3300031543\|Ga0318516_10088053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1740	Open in IMG/M
3300031543\|Ga0318516_10367749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	829	Open in IMG/M
3300031543\|Ga0318516_10809995	Not Available	529	Open in IMG/M
3300031544\|Ga0318534_10174066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1244	Open in IMG/M
3300031545\|Ga0318541_10058598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1995	Open in IMG/M
3300031546\|Ga0318538_10007157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4401	Open in IMG/M
3300031546\|Ga0318538_10220439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1015	Open in IMG/M
3300031546\|Ga0318538_10428125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	716	Open in IMG/M
3300031561\|Ga0318528_10320287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	832	Open in IMG/M
3300031561\|Ga0318528_10526972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	634	Open in IMG/M
3300031573\|Ga0310915_10022952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3817	Open in IMG/M
3300031573\|Ga0310915_10119043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1801	Open in IMG/M
3300031573\|Ga0310915_10315558	Not Available	1105	Open in IMG/M
3300031573\|Ga0310915_10432448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	935	Open in IMG/M
3300031573\|Ga0310915_10647714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	747	Open in IMG/M
3300031682\|Ga0318560_10005854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4977	Open in IMG/M
3300031682\|Ga0318560_10029827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2570	Open in IMG/M
3300031723\|Ga0318493_10023501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2739	Open in IMG/M
3300031736\|Ga0318501_10042698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2079	Open in IMG/M
3300031744\|Ga0306918_10448986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	1007	Open in IMG/M
3300031747\|Ga0318502_10232193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1073	Open in IMG/M
3300031747\|Ga0318502_11028572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	503	Open in IMG/M
3300031769\|Ga0318526_10078407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1299	Open in IMG/M
3300031770\|Ga0318521_10177477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1221	Open in IMG/M
3300031777\|Ga0318543_10003351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4993	Open in IMG/M
3300031778\|Ga0318498_10064698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1637	Open in IMG/M
3300031779\|Ga0318566_10212484	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300031781\|Ga0318547_10297181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	980	Open in IMG/M
3300031797\|Ga0318550_10003904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5153	Open in IMG/M
3300031821\|Ga0318567_10175653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1191	Open in IMG/M
3300031835\|Ga0318517_10305528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300031859\|Ga0318527_10483332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300031879\|Ga0306919_10885050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	685	Open in IMG/M
3300031897\|Ga0318520_10014326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3589	Open in IMG/M
3300031910\|Ga0306923_11245298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	792	Open in IMG/M
3300031941\|Ga0310912_10797574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	729	Open in IMG/M
3300031942\|Ga0310916_10300004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1360	Open in IMG/M
3300031942\|Ga0310916_10759371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	818	Open in IMG/M
3300031945\|Ga0310913_10600422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300031946\|Ga0310910_10025610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3947	Open in IMG/M
3300031954\|Ga0306926_10396151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1704	Open in IMG/M
3300031954\|Ga0306926_10453650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1579	Open in IMG/M
3300031954\|Ga0306926_12398504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	581	Open in IMG/M
3300031959\|Ga0318530_10421540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031981\|Ga0318531_10134758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1101	Open in IMG/M
3300032001\|Ga0306922_10795077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum litoreum → Thalassobaculum litoreum DSM 18839	989	Open in IMG/M
3300032010\|Ga0318569_10343438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	695	Open in IMG/M
3300032042\|Ga0318545_10093830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1047	Open in IMG/M
3300032042\|Ga0318545_10221403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	678	Open in IMG/M
3300032059\|Ga0318533_10041160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3041	Open in IMG/M
3300032065\|Ga0318513_10647740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	517	Open in IMG/M
3300032066\|Ga0318514_10063211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1816	Open in IMG/M
3300032066\|Ga0318514_10449184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300032066\|Ga0318514_10620564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	575	Open in IMG/M
3300032089\|Ga0318525_10290691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	839	Open in IMG/M
3300032091\|Ga0318577_10038419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2104	Open in IMG/M
3300032261\|Ga0306920_100529928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1747	Open in IMG/M
3300032261\|Ga0306920_104450144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300033290\|Ga0318519_10558710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	693	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.12%
Plants	Host-Associated → Plants	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.19%
Loam	Environmental → Terrestrial → Soil → Loam	21.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.63%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09754842	2228664022	Soil	MTEVDHLPRLSSGAQRMRRYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRKALAAALHRYLDANPIAGRRW
JGI1027J12803_1044804622	3300000955	Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLACIRVQLRRSEVEALIARGLLEPAERQNRSALAAALHRYLDANPIAGRRW*
JGI10216J12902_1034452303	3300000956	Soil	MIDAVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLVQPAEREDRRALAEALHRYLDRNPIAERRQ*
Ga0066398_102249451	3300004268	Tropical Forest Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW*
Ga0066395_106351712	3300004633	Tropical Forest Soil	MTEVAHLPRLSSGAQRMRRYRERHRRGLSCVKVQLRRSEVDGLIACKLLEPNEREDRRALAAALHRYLDANPIAGRRW*
Ga0066388_1000345292	3300005332	Tropical Forest Soil	MTISSESVPVVSAGARRMRWYRERRRRGLTCIKVDLRRSEVDALIARGWLKPAERQDRNALAAALHRYLDANPIAGRRQ*
Ga0066388_1000812134	3300005332	Tropical Forest Soil	MSDGAAPSLSLGARRMRWYRERRRRGLSCIKVQLRRSEVEALIACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ*
Ga0066388_1002027194	3300005332	Tropical Forest Soil	MTEVEHLPRLSPGAQRMRHYRERRRRGLSCIKVQLRRSEVEALIACGLLQPAEQDRNALAAALHRYLYENPIAGRRQWRATPIP*
Ga0066388_1014557592	3300005332	Tropical Forest Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANPIAGRRW*
Ga0066388_1017671782	3300005332	Tropical Forest Soil	MIDGVSSVSPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLDANPIAGRR*
Ga0066388_1034478352	3300005332	Tropical Forest Soil	MSDGAAPSPSLAAERMRRYRERRRRGLSCIKVQLRRTEVDALIACKLLEPAEREDRRALAEALHRYLDVNPIGGYRR*
Ga0066388_1034842092	3300005332	Tropical Forest Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGHRW*
Ga0066388_1074918681	3300005332	Tropical Forest Soil	MTEADRLPRLSPGAQRMRHYRERRRRGLSCIKVQLRRGEVEALIAFGLLQPAQRQDRSALVAALHRYLDLHPIGGHRR*
Ga0008090_150620262	3300005363	Tropical Rainforest Soil	MIDGVSPLSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPTEREDRRALAAALHRYLDRNPIAGRRQ*
Ga0070709_101310891	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFENLPRVSSGAERMRRYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRKALAAALHRYLDANPIAGRRW*
Ga0070711_1005183312	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFENLPRVSSGAERMRRYRERRRRGLSCIKVQLRRSEVDALIARGLLERAERQDRSALAAALHRYLDANPIAGRRW*
Ga0066905_1000256564	3300005713	Tropical Forest Soil	MTDVVLSSAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERQDRSALAAALHRYLDANPIAGGRW*
Ga0066905_1003786532	3300005713	Tropical Forest Soil	MTEVMHLPRLSSGAQRMRRYRERHRRGLSCVKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW*
Ga0066905_1013871261	3300005713	Tropical Forest Soil	MTTSSESVPVVSAGARRMRWYRERRRRGITCIKVQLRRSEVEALMACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ*
Ga0066903_10001035210	3300005764	Tropical Forest Soil	MIDAMSPVSPAAERMRRYRERRRRGLLCFKVQLRRTELDALIARGLLEPAERKDRSALAAALLRYLDANPIAGGRW*
Ga0066903_1001076993	3300005764	Tropical Forest Soil	MTTSESVSVVSAGARRMRWYRERRRRGLTCIKVDLRRSEVDALIACGLLKPAQRQDRNALAAALHRYLDANPIAGRRP*
Ga0066903_1001554663	3300005764	Tropical Forest Soil	MTEVAHPPRLPPAAERMRRYRARRRRGLSCIKVQLRRSEVDALIACGFLGATDREDRSALAAALHRYLNANSIAGGRQ*
Ga0066903_1010980842	3300005764	Tropical Forest Soil	MIDGVSPVSPAAERMRRYRDRRQRGLVCIRIQLWRREVDGLIACKLLDPTQQEDRRALAAALHRDVNPIAGPR*
Ga0066903_1024926251	3300005764	Tropical Forest Soil	MRWYRERRRRGITCIKVQMRRSEVEALIACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ*
Ga0066903_1039702883	3300005764	Tropical Forest Soil	MTEVAHLSRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPI
Ga0066903_1053440292	3300005764	Tropical Forest Soil	LARFDRNVETHRQRLSSAAERMRLYRERRRRALSCVKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLDA
Ga0066903_1059845201	3300005764	Tropical Forest Soil	MTEVDHLPTLSSGAQRMRRYRERRRRGLSCIKVQLRRSEVDALIASGLLEHTERQDRGLLAAALHRYLDINPIGGRRW*
Ga0066903_1088779302	3300005764	Tropical Forest Soil	MSDCLSPVSPGAERMRRYRERRQRGLSCIRVELRRSEVDALIAHGLLVPAERQDRGALAAALHRFLDRHPIATQWR*
Ga0111538_112902831	3300009156	Populus Rhizosphere	SRKEAVMSDSLSPVSPGAERMRRYRERRQRGLLCIRVELRRSEVDALIAHGLLAPAERQDRGALAAALHRFLDRHPIAARWR*
Ga0126384_104375972	3300010046	Tropical Forest Soil	MTTSSESVPVVSAGARRMRWYRERRRRGLTCIKVDLRRSEVDGLIACKLLEPTEREDRRALAEALHRYLDVNPIAGYRR*
Ga0126384_114552292	3300010046	Tropical Forest Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANPIAGRR
Ga0126382_111277752	3300010047	Tropical Forest Soil	MTEVAHLPRLPSAAERMRRYRERRRRGLLCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW*
Ga0126376_121897632	3300010359	Tropical Forest Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGLLAAALHRYLDNNPIAGRRW*
Ga0126372_128194492	3300010360	Tropical Forest Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEADALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW*
Ga0126378_102682962	3300010361	Tropical Forest Soil	MTDVVLSSAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW*
Ga0126379_100648912	3300010366	Tropical Forest Soil	MTDVVLSSAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLDANPIAGGRW*
Ga0126379_102899402	3300010366	Tropical Forest Soil	MTELAHLPRLSSGAQRMRLYRERRRRGLLCIKVQVRRSEVEALIACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ*
Ga0137376_116235021	3300012208	Vadose Zone Soil	MTAVDHLPRLSSGAQRMRRYRERRRRGLSCIKVQMRRSEMEALIACGLLQPDEQQDRSALAAALHRYLDLHPIAGRRQ*
Ga0126369_102195882	3300012971	Tropical Forest Soil	VTTCSETVPVISAGAQRMRWYRERRRRGITCIKVQMRRSEVEALIACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ*
Ga0182036_118418341	3300016270	Soil	MTEVMHLPRPSSGAQRMRRYRERHRRGLSCVKVQLRRTEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0182041_102749893	3300016294	Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALTACGLLEPADRQDRGLLAAALHRYLDNNPIAGRRW
Ga0182035_109552091	3300016341	Soil	LPRLSSAAERMRLYRERRRRGLSCVKVQLRRTEVDALIARGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0182032_109432232	3300016357	Soil	TDVAHLPRLSSAAERMRLYRDRRRRGLLCINVQFRRTEVDALIARGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0182034_102719531	3300016371	Soil	MNPLGTTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANP
Ga0182034_104108011	3300016371	Soil	MVDSVSPVSPAAERMRHYRARRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYL
Ga0182040_100316955	3300016387	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDAN
Ga0182039_104408452	3300016422	Soil	MIDGMSPVSPAAEGMRRYRERRRRGLSCIKVQLWRSEVDGLIASGLLKPAERQDRGALAAALHRYLDANPIAGRRW
Ga0182038_102686743	3300016445	Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANPIAAR
Ga0126371_112371202	3300021560	Tropical Forest Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANPIAGRRW
Ga0207699_107263461	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFENLPRVSSGAERMRRYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRKALAAALHRYLDANPIAGRRW
Ga0307317_102322662	3300028720	Soil	MTETSPTPAAERMRRYRERRRRGLSCIKVELRRSEVDALIACKLLEPTEREDRRALAAALHRYLDCNPIAGRRQ
Ga0307280_100398623	3300028768	Soil	MTEVAHLPRLSPAAERMRRHRERRRRGLSCIKVELRRSEVDALVACKLLEPTEREDRRALTAALHRYLDSNPITGRRQ
Ga0307302_104338241	3300028814	Soil	MTETSPTPAAERMRRYRERRRRGLSCIKVELRRSEVDALVACKLLEPTEREDRRALTAALHRYLDSNPI
Ga0307289_103271711	3300028875	Soil	MIDGVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACKLLEPTEREDRRALTAALHRYLDSNPITGRRQ
Ga0307278_102211871	3300028878	Soil	GEWASPWAETTMIDGVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACKLLEPTEREDRRALTAALHRYLDSNPITGRRQ
Ga0318516_100880534	3300031543	Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGLLAAALHRYLDNNPIAGRRW
Ga0318516_103677491	3300031543	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLD
Ga0318516_108099951	3300031543	Soil	MTEVDHLPRLSPGAQRMRRYRARRRRGLSCIRVQLRRSEVEALIACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ
Ga0318534_101740661	3300031544	Soil	MVDSVSPVSPAAERMRHYRARRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRR
Ga0318541_100585983	3300031545	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIA
Ga0318538_100071577	3300031546	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318538_102204391	3300031546	Soil	LTDVAHLPRLSSAAERVRLYRERRRRGLSCVKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318538_104281253	3300031546	Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0318528_103202872	3300031561	Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIRVQLRRSEVDALIACGLLQSTDRQNRIALATALHRYLDAYPIAAGRW
Ga0318528_105269721	3300031561	Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGR
Ga0310915_100229524	3300031573	Soil	MTDSTPEPSPAAKRMRLYRERRRRGLSCIKVELRRNEVAGLIACKLLEPTERHDRRALAAALHRYLDANPIAGRRQ
Ga0310915_101190433	3300031573	Soil	MNPLGTTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANPIAGRRW
Ga0310915_103155581	3300031573	Soil	SAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0310915_104324482	3300031573	Soil	MIDGMSPVSPAAEGMRRYRERRRRGLSCIKVQLWRSEVDGLIASGLLKPAEQQDRGVLAAALHRYLDANPIAGRRW
Ga0310915_106477143	3300031573	Soil	SAMTEVDHLPRLSSAAERMRLYRERRRRGLSCVKVQLRRTEVDALIARGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0318560_100058548	3300031682	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHR
Ga0318560_100298273	3300031682	Soil	MIDASPTPAAERVRLYRERRRRGLSCVKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318493_100235012	3300031723	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318501_100426983	3300031736	Soil	MVDSVSPVSPAAERMRHYRARRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0306918_104489862	3300031744	Soil	MVDSVSPVSPAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGERRW
Ga0318502_102321931	3300031747	Soil	MTDVAHLPRLSSAAERMRLYRERRRRGLSCVKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHR
Ga0318502_110285722	3300031747	Soil	MIDGMSPVSPAAEGMRRYRERRRRGLSCIKVQLWRSEVDGLIASGLLKPAEQQDRGVLAAALHRYLDANPIA
Ga0318526_100784073	3300031769	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRTEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318521_101774773	3300031770	Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALSACGLLQPVERQDRNAFAAALHRYLDANPIAGRG
Ga0318543_100033511	3300031777	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRY
Ga0318498_100646983	3300031778	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHR
Ga0318566_102124842	3300031779	Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLESTEREDRGALAAALHRYLDANPIAGRRW
Ga0318547_102971811	3300031781	Soil	MIDASPTPAAERMRRYRERRRRGLLCVKVQLRRTEVDALIARGLLEPAERKDRSALAAALHR
Ga0318550_100039042	3300031797	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRTEVDALIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318567_101756533	3300031821	Soil	MTEVADLPRLSSAVERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0318517_103055282	3300031835	Soil	MIDASPTPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLDANPIAARHM
Ga0318527_104833322	3300031859	Soil	MIDASPTPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLD
Ga0306919_108850502	3300031879	Soil	MTEVMHLPRLSSGAQRMRVYRERRRRGLSCIKVQLRRSEVDGLIASGLLKPAERQDRGALAAALHRYLDANPIAGRRW
Ga0318520_100143261	3300031897	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAG
Ga0306923_112452983	3300031910	Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGERRW
Ga0310912_107975741	3300031941	Soil	EATMVDSVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGERRW
Ga0310916_103000042	3300031942	Soil	MTEVAHLPRLPTAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGRRW
Ga0310916_107593712	3300031942	Soil	MTEIDRLPRLSPGAQRMRRYRERRRRGLSCIKVQLRRSEVEALIACGLLQPAQRQDRNALAAALHRYLDENPIAGRRQ
Ga0310913_106004222	3300031945	Soil	MIDASPTPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYL
Ga0310910_100256104	3300031946	Soil	MIDASPTPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLDANPIAGGRW
Ga0306926_103961512	3300031954	Soil	MTEVVHLPRLPSATERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0306926_104536501	3300031954	Soil	MTEVDHLPRLSSAAERMRLYRERRRRGLSCVKVQLRRTEVDALIARGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0306926_123985042	3300031954	Soil	MVDSVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGLLAAALHRYLDNNPIAGRRW
Ga0318530_104215402	3300031959	Soil	MIDASPTPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPADRQDRGVLAAALHRYLDINPI
Ga0318531_101347581	3300031981	Soil	MTDVAHLPRLSSAAERMRLYRERRRRGLSCVKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0306922_107950772	3300032001	Soil	MVDSVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGERRW
Ga0318569_103434382	3300032010	Soil	LTDVAHLPRLSSAAERVRLYRERRRRGLSCVKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRY
Ga0318545_100938303	3300032042	Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACKLLEPTEREDRRALAAALHRYLDANPIAGHRW
Ga0318545_102214032	3300032042	Soil	MNPLGPTQSLSDAARRMRLYRERRRRGLSCIKVQLRRSEVDGLVACKLLEPTEREDRGALAAALHRYLDANPI
Ga0318533_100411603	3300032059	Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGERRW
Ga0318513_106477401	3300032065	Soil	LTDVAHLPRLSSAAERVRLYRERRRRGLSCVKVQLRRSEVDGLIACKLLEPTEREDRRALAAALHRYLDANP
Ga0318514_100632113	3300032066	Soil	MTEVAHLPRLPSAAERMRLYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRY
Ga0318514_104491841	3300032066	Soil	MIDASPTPAAERMRRYRERRRRGLLCIKVQLRRTEVDALIARGLLEPAERKDRSALAAALHRYLDANPIAARHMVTRND
Ga0318514_106205641	3300032066	Soil	TAMIDALSPVSPAAERMRRYRERRRRGLSCIRVQLRRSEVDALIACGLLQSTDRQNRIALATALHRYLDAYPIAAGRW
Ga0318525_102906912	3300032089	Soil	MIDGVSALSPAAERMRLYRERRRRGLSCIKVQLRRSEVDGLIACKLLEPTEREDRRALAAALH
Ga0318577_100384192	3300032091	Soil	MIDALSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0306920_1005299281	3300032261	Soil	MTEASPTQGAERMRLYRERRRRGLSCIKIQLRRVEVDGLIACKLLEPTEREDRRALAAALHRYLDANPIAGR
Ga0306920_1044501442	3300032261	Soil	MTEVMHLPRPSSGAQRMRHYRARRRRGLSCIKVQLRRSEVDALIACGLLEPADRQDRGVLAAALHRYLDINPIGGRRW
Ga0318519_105587102	3300033290	Soil	MIDGVSPVSPAAERMRRYRERRRRGLSCIKVQLRRSEVDGLIASGLLKPAERQDRGALAAALHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences