Metagenome / Metatranscriptome Family F080783

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080783
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	63 residues
Representative Sequence	ILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP
Number of Associated Samples	60
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.30 %
% of genes near scaffold ends (potentially truncated)	71.93 %
% of genes from short scaffolds (< 2000 bps)	86.84 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.632 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (52.632 % of family members)
Environment Ontology (ENVO)	Unclassified (70.175 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.789 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.66% β-sheet: 0.00% Coil/Unstructured: 39.34%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13267	DUF4058	7.89
PF04255	DUF433	3.51
PF07602	DUF1565	1.75
PF02796	HTH_7	1.75
PF02810	SEC-C	1.75
PF04014	MazE_antitoxin	1.75
PF11954	DUF3471	0.88
PF05685	Uma2	0.88
PF11867	DUF3387	0.88
PF07883	Cupin_2	0.88
PF00753	Lactamase_B	0.88
PF00069	Pkinase	0.88
PF14311	DUF4379	0.88
PF13289	SIR2_2	0.88
PF01061	ABC2_membrane	0.88
PF07592	DDE_Tnp_ISAZ013	0.88
PF01850	PIN	0.88
PF04237	YjbR	0.88
PF07929	PRiA4_ORF3	0.88
PF13310	Virulence_RhuM	0.88
PF16326	ABC_tran_CTD	0.88
PF07285	DUF1444	0.88
PF00072	Response_reg	0.88
PF06616	BsuBI_PstI_RE	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.51
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	3.51
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.88
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.88
COG4848	YtpQ protein involved in methylglyoxal resistance, DUF1444/UPF0354 family	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
All Organisms	root	All Organisms	47.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
cellular organisms	root	All Organisms → cellular organisms	47.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	29.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	28.95 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	21.05 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.88 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.88 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	7.02 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	4.39 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.88 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.88 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.88 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.88 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	7.02 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.75 %
Chloroflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae	0.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.88 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.88 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.88 %
Thalassomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas	0.88 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	5.26 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.75 %
Oscillochloridaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae	0.88 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.88 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.88 %
Thalassomonas actiniarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas → Thalassomonas actiniarum	0.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.88 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.88 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.75 %
unclassified Aquisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera	0.88 %
Oscillochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris	0.88 %
Rhodopirellula maiorica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	0.88 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.88 %
Thalassomonas actiniarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas → Thalassomonas actiniarum	0.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.88 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.88 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.63 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.75 %
Aquisphaera sp. JC669	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	0.88 %
Candidatus Oscillochloris fontis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	0.88 %
Rhodopirellula maiorica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	0.88 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.88 %
Thalassomonas actiniarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas → Thalassomonas actiniarum	0.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.88 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.88 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10056789	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2049	Open in IMG/M
3300004468\|Ga0068977_1294206	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300004470\|Ga0068967_1308413	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300004478\|Ga0068972_1552055	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300004607\|Ga0068948_1054712	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	555	Open in IMG/M
3300004973\|Ga0072322_1006277	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300006052\|Ga0075029_101154365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Thalassomonas → Thalassomonas actiniarum	540	Open in IMG/M
3300006059\|Ga0075017_100318593	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1152	Open in IMG/M
3300006086\|Ga0075019_10591483	Not Available	695	Open in IMG/M
3300009520\|Ga0116214_1310896	Not Available	605	Open in IMG/M
3300009521\|Ga0116222_1311496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	681	Open in IMG/M
3300009521\|Ga0116222_1562542	Not Available	500	Open in IMG/M
3300009522\|Ga0116218_1007409	All Organisms → cellular organisms → Bacteria	4995	Open in IMG/M
3300009523\|Ga0116221_1546776	Not Available	509	Open in IMG/M
3300009524\|Ga0116225_1159145	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1029	Open in IMG/M
3300009524\|Ga0116225_1273516	Not Available	756	Open in IMG/M
3300009524\|Ga0116225_1522641	Not Available	527	Open in IMG/M
3300009525\|Ga0116220_10003048	All Organisms → cellular organisms → Bacteria	6688	Open in IMG/M
3300009525\|Ga0116220_10485160	Not Available	560	Open in IMG/M
3300009672\|Ga0116215_1171575	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	960	Open in IMG/M
3300009672\|Ga0116215_1512334	Not Available	519	Open in IMG/M
3300009672\|Ga0116215_1529097	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	509	Open in IMG/M
3300009683\|Ga0116224_10164899	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1065	Open in IMG/M
3300009683\|Ga0116224_10308760	Not Available	752	Open in IMG/M
3300009698\|Ga0116216_10400859	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	833	Open in IMG/M
3300009698\|Ga0116216_10507303	Not Available	729	Open in IMG/M
3300009698\|Ga0116216_10563113	Not Available	687	Open in IMG/M
3300009824\|Ga0116219_10399057	Not Available	767	Open in IMG/M
3300009824\|Ga0116219_10424460	Not Available	740	Open in IMG/M
3300009824\|Ga0116219_10456671	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300009839\|Ga0116223_10067068	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300010339\|Ga0074046_10072832	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2240	Open in IMG/M
3300010339\|Ga0074046_10181563	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1330	Open in IMG/M
3300010339\|Ga0074046_10492828	Not Available	732	Open in IMG/M
3300010339\|Ga0074046_10546855	Not Available	688	Open in IMG/M
3300010341\|Ga0074045_10148482	Not Available	1594	Open in IMG/M
3300010341\|Ga0074045_10357528	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	951	Open in IMG/M
3300010341\|Ga0074045_10715673	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	635	Open in IMG/M
3300010343\|Ga0074044_10936024	Not Available	567	Open in IMG/M
3300010343\|Ga0074044_11018905	Not Available	543	Open in IMG/M
3300010379\|Ga0136449_100119111	All Organisms → cellular organisms → Bacteria	5319	Open in IMG/M
3300010379\|Ga0136449_100187741	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3961	Open in IMG/M
3300010379\|Ga0136449_100385601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2497	Open in IMG/M
3300010379\|Ga0136449_100501617	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	2107	Open in IMG/M
3300010379\|Ga0136449_100602171	Not Available	1873	Open in IMG/M
3300010379\|Ga0136449_101264496	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1155	Open in IMG/M
3300010379\|Ga0136449_101308824	Not Available	1129	Open in IMG/M
3300010379\|Ga0136449_102903483	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010379\|Ga0136449_103077927	Not Available	648	Open in IMG/M
3300010379\|Ga0136449_103131208	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	641	Open in IMG/M
3300010379\|Ga0136449_103880980	Not Available	561	Open in IMG/M
3300010379\|Ga0136449_103907588	Not Available	558	Open in IMG/M
3300010379\|Ga0136449_104285625	Not Available	528	Open in IMG/M
3300010379\|Ga0136449_104626613	Not Available	504	Open in IMG/M
3300011061\|Ga0138534_1078466	Not Available	1468	Open in IMG/M
3300011069\|Ga0138592_1141291	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1072	Open in IMG/M
3300011076\|Ga0138574_1081866	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1561	Open in IMG/M
3300011088\|Ga0138576_1014814	Not Available	518	Open in IMG/M
3300011089\|Ga0138573_1013739	Not Available	508	Open in IMG/M
3300014162\|Ga0181538_10158275	Not Available	1294	Open in IMG/M
3300014162\|Ga0181538_10524938	Not Available	622	Open in IMG/M
3300014162\|Ga0181538_10578145	Not Available	587	Open in IMG/M
3300014164\|Ga0181532_10575323	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300014165\|Ga0181523_10282801	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300014165\|Ga0181523_10392424	Not Available	774	Open in IMG/M
3300014165\|Ga0181523_10641319	Not Available	582	Open in IMG/M
3300014199\|Ga0181535_10685496	Not Available	584	Open in IMG/M
3300014199\|Ga0181535_10876922	Not Available	506	Open in IMG/M
3300014200\|Ga0181526_10103341	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300014200\|Ga0181526_10574296	Not Available	713	Open in IMG/M
3300014200\|Ga0181526_10919963	Not Available	550	Open in IMG/M
3300016730\|Ga0181515_1080895	Not Available	584	Open in IMG/M
3300016730\|Ga0181515_1503990	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1281	Open in IMG/M
3300017938\|Ga0187854_10276829	Not Available	722	Open in IMG/M
3300017946\|Ga0187879_10164683	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1250	Open in IMG/M
3300017946\|Ga0187879_10248675	Not Available	991	Open in IMG/M
3300017946\|Ga0187879_10829581	Not Available	517	Open in IMG/M
3300017961\|Ga0187778_10390920	Not Available	911	Open in IMG/M
3300017995\|Ga0187816_10486325	Not Available	555	Open in IMG/M
3300018008\|Ga0187888_1022806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3247	Open in IMG/M
3300018014\|Ga0187860_1281617	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	650	Open in IMG/M
3300018017\|Ga0187872_10056387	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300018017\|Ga0187872_10071353	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1797	Open in IMG/M
3300018022\|Ga0187864_10029545	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3262	Open in IMG/M
3300018022\|Ga0187864_10087660	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1643	Open in IMG/M
3300018035\|Ga0187875_10263062	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	939	Open in IMG/M
3300018035\|Ga0187875_10715272	Not Available	526	Open in IMG/M
3300018037\|Ga0187883_10397037	Not Available	706	Open in IMG/M
3300018037\|Ga0187883_10407532	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	697	Open in IMG/M
3300018038\|Ga0187855_10307280	Not Available	928	Open in IMG/M
3300018038\|Ga0187855_10467878	Not Available	734	Open in IMG/M
3300018042\|Ga0187871_10548440	Not Available	640	Open in IMG/M
3300018043\|Ga0187887_10451960	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300018086\|Ga0187769_10743266	Not Available	742	Open in IMG/M
3300018086\|Ga0187769_11213511	Not Available	571	Open in IMG/M
3300018090\|Ga0187770_11343863	Not Available	580	Open in IMG/M
3300025576\|Ga0208820_1072217	Not Available	902	Open in IMG/M
3300027497\|Ga0208199_1069587	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300027625\|Ga0208044_1082130	Not Available	965	Open in IMG/M
3300027625\|Ga0208044_1191701	Not Available	550	Open in IMG/M
3300027641\|Ga0208827_1071527	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1097	Open in IMG/M
3300027825\|Ga0209039_10107942	Not Available	1187	Open in IMG/M
3300027825\|Ga0209039_10219224	Not Available	768	Open in IMG/M
3300030494\|Ga0310037_10043367	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2150	Open in IMG/M
3300030494\|Ga0310037_10142950	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1089	Open in IMG/M
3300030494\|Ga0310037_10486695	Not Available	501	Open in IMG/M
3300030707\|Ga0310038_10362552	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	638	Open in IMG/M
3300032160\|Ga0311301_10062928	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	8050	Open in IMG/M
3300032160\|Ga0311301_10318697	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2469	Open in IMG/M
3300032160\|Ga0311301_10598546	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1590	Open in IMG/M
3300032160\|Ga0311301_11005315	Not Available	1102	Open in IMG/M
3300032160\|Ga0311301_11238788	Not Available	951	Open in IMG/M
3300033755\|Ga0371489_0499261	Not Available	539	Open in IMG/M
3300033818\|Ga0334804_069643	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.79%
Aquatic	Environmental → Aquatic	34.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.04%
Freshwater	Environmental → Aquatic → Freshwater	31.58%
Sediment	Environmental → Aquatic → Sediment	2.63%
Peat	Environmental → Terrestrial → Peat	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	31.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	29.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	52.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.53%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	7.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004607	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011061	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011069	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011088	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100567891	3300000567	Peatlands Soil	MVSPELFQVSAAAWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0068977_12942062	3300004468	Peatlands Soil	VIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLTDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0068967_13084132	3300004470	Peatlands Soil	VLRGGTRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLTDHLKVEARRLGVHRLHGLRWSQVAFAHSPCP*
Ga0068972_15520551	3300004478	Peatlands Soil	AESWLETVAQYGRRFHCAVGLADHRKAEAQSLGVNWLQGVRSSQVAFAHSPCP*
Ga0068948_10547121	3300004607	Peatlands Soil	WLETVARFGRLFHRAGGLAEHLKVEAERLGVNWLHGLHSSQVAFAHSPPP*
Ga0072322_10062771	3300004973	Peatlands Soil	AESWLETVAQFGRRFHRAVGLADHLKAEAQRLRVNWLQGVRSSQVSFAHSPCP*
Ga0075029_1011543651	3300006052	Watersheds	QVSAESWLETVARFGRRFHRAVGLADHLQAEAQRLGVAWLHGLRWSQAAFAPPLRS*
Ga0075017_1003185932	3300006059	Watersheds	PPSRSKMALNSRSVPAEWWLETIARFGRQFHRAMGLSDHLKAEARRLGVHRLHGLRWSQVAFAHSPCP*
Ga0075019_105914831	3300006086	Watersheds	MRGGTRGVIPQALASILDRLQVFAESWLETIDRFDRQFHRAVGRSDHLKAEARRLGVNRLLGLRWSQVAFAHSPCP*
Ga0116214_13108961	3300009520	Peatlands Soil	VIPLALASILDRLQLSAESWLATISRFGRQFHRAVGLSDHLKVEARRLGVSRLHGLRWSQVAFGHAPCP*
Ga0116222_13114962	3300009521	Peatlands Soil	SWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116222_15625421	3300009521	Peatlands Soil	GLESILDRLKVSAESWLETVAQYGRRFHCAVGLADHRKAEAQSLGVNLLQGVRSSQVAFAHSPCP*
Ga0116218_10074094	3300009522	Peatlands Soil	RGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116221_15467761	3300009523	Peatlands Soil	LQVSAESWLETVAQLGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSEVAFAHTPSP*
Ga0116225_11591452	3300009524	Peatlands Soil	VIPLALALILDRLQLSAESWLETISRFGRQFHRAVGLSDHLKVEARRLGVSRLHGLRWSQVAFGHAPCP*
Ga0116225_12735161	3300009524	Peatlands Soil	TRGVIPLALASILDRLQVSAESWLETIARFGRQFHRALGLSNHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116225_15226412	3300009524	Peatlands Soil	DQGLGSLLDRLKVSAGSWLETVAQFGRRFHRAVGLADHLKAETLRLGVNWLQGVRSSQVAFAHSPCP*
Ga0116220_100030487	3300009525	Peatlands Soil	VIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116220_104851601	3300009525	Peatlands Soil	YELCMVSPELFQVSAAAWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0116215_11715752	3300009672	Peatlands Soil	VIPLALASILDRLQVSAESWLETISRFGRQFHRAVGLSDHLKVEARRLGVSRLHGLRWSQVAFGHAPCP*
Ga0116215_15123341	3300009672	Peatlands Soil	LESILDRLKVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0116215_15290972	3300009672	Peatlands Soil	SRSVPAEWWLETIARFGRQFHRAMGLSDLLKAEARRLGVHRLHGLRWCQVAFAHSPCP*
Ga0116224_101648992	3300009683	Peatlands Soil	VIPLALASILDRLQLSAESWLETISRFGRQFHRAVGLSDHLKVEARRLGVSRLHGLRWSQVAFGHAPCP*
Ga0116224_103087601	3300009683	Peatlands Soil	DPLSGNGLQVSAEWWLETVAQFGRRFHRALGLVDHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0116216_104008592	3300009698	Peatlands Soil	LASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116216_105073031	3300009698	Peatlands Soil	VIPLALASILDRLQVSAESWLETIARFGRQFHRALGLSNHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116216_105631132	3300009698	Peatlands Soil	ESWLETVAQFGRRFHRAVGLADHLKAESQRLGVNWLQGIRSSRVSFAHSPCL*
Ga0116219_103990571	3300009824	Peatlands Soil	LRGGTRGVIPLALASILDRLQVSAESWLETIARFGRQFHRALGLSNHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116219_104244602	3300009824	Peatlands Soil	GTRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0116219_104566711	3300009824	Peatlands Soil	HGVIPQALESILDRLHVSAEPWLETVAQVGRRFHRAVGLADHLKAEAQRLGVSWLQGVRSSQVAFAYSPCP*
Ga0116223_100670684	3300009839	Peatlands Soil	WLETVARFGRRFHRAVGLADHLQAEAQRLGVAWLHGLRWSQAAFAPPLRS*
Ga0074046_100728321	3300010339	Bog Forest Soil	PLALASILDRLQVSAESWLETIARFGRQFHRAVGLSEHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0074046_101815632	3300010339	Bog Forest Soil	VIPLALASILDRLQVSAESWLETIAQFGGQFHRAVGLPEHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0074046_104928282	3300010339	Bog Forest Soil	VHGIEGLIPLALASILDRLQVFAESWLETIARFGRQFHRALGLSDHLKVEARRLGVHRLHGLRWCQVAFAHSPSPCP*
Ga0074046_105468551	3300010339	Bog Forest Soil	TRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLCEHLKAEARRLGVNRLHGLRWSQVAFAPSPCP*
Ga0074045_101484821	3300010341	Bog Forest Soil	ESWLETIARFGRQFHRAVGLSEHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0074045_103575283	3300010341	Bog Forest Soil	VHGIEGLIPLALASILDRLQVSAESWLETIARFGRQFHGAVGLSDHLKVEARRLGVHRLHGLRW
Ga0074045_107156731	3300010341	Bog Forest Soil	VIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSEHLKVEARRLGVNRLHGLRWSQVAFAHSPCP*
Ga0074044_109360241	3300010343	Bog Forest Soil	LESILDRLQVSAESWLETVAQFGRRFHRAVGLADQLKAEAQRLGVSWLQGVRSSQVAFAYSPCP*
Ga0074044_110189051	3300010343	Bog Forest Soil	ILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0136449_1001191119	3300010379	Peatlands Soil	MSAHFLSGDGLQVSAESWLETVARFGRRFHRAVGLADHLKAEAQRLGVNWMQGVRSSQVAFAE*
Ga0136449_1001877411	3300010379	Peatlands Soil	VAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0136449_1003856012	3300010379	Peatlands Soil	PQGLESILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGIRSSQVAFAHSPCP*
Ga0136449_1005016171	3300010379	Peatlands Soil	AANPVKVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPST*
Ga0136449_1006021714	3300010379	Peatlands Soil	SAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNLLQGVRSSQVAFAHSPCP*
Ga0136449_1012644961	3300010379	Peatlands Soil	VIPQALASILDRLQVFAESWLETIDRFDRQFHRAMGQSDHLKAEARRLGVNRLLGLRWSQVAFAHSPCP*
Ga0136449_1013088241	3300010379	Peatlands Soil	SWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSEVAFAHSPCL*
Ga0136449_1029034831	3300010379	Peatlands Soil	QVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVSWLHGVRSSQVAFAHSPCP*
Ga0136449_1030779271	3300010379	Peatlands Soil	VSAESWLETVAQFGRRFHRAVGLADHLKAEARRLGVNWLQGVRSSQVAFAHTPCP*
Ga0136449_1031312082	3300010379	Peatlands Soil	WLETVAQFGRRFHRAVGLADHLKAEAQRLGVSWLQGIRSSQVAFAHSPCP*
Ga0136449_1038809801	3300010379	Peatlands Soil	AAWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0136449_1039075882	3300010379	Peatlands Soil	ETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFARSPCP*
Ga0136449_1042856251	3300010379	Peatlands Soil	RLQVAAESWLETVAQFGCRFHRAVGLADHLKAEAQRLGVNWRQGVRSSQVAFAHSPCP*
Ga0136449_1046266132	3300010379	Peatlands Soil	SWLETVAQFGRRFHRAVGLADHLKAEAQRLGANWLQGVRSSQVAFAHSPCP*
Ga0138534_10784662	3300011061	Peatlands Soil	MIPSALGSILDRLQVSAESWLETVARFGRRFHRAVGLADNLKVEAQRFGVNWLHGLRWSQVAFAPAPCR*
Ga0138592_11412913	3300011069	Peatlands Soil	AESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVSFAHSPCP*
Ga0138574_10818662	3300011076	Peatlands Soil	VIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLTDHLKVEARRLGVHRLHGLRWSQVAFAHSPCP*
Ga0138576_10148141	3300011088	Peatlands Soil	ETVARFGRLFHRAVGLAEHLKVEAERLGVNWLHGLHSSQVAFAHSPPP*
Ga0138573_10137391	3300011089	Peatlands Soil	VIPAALASILDRLQVSAESWLETVARFGRRFHLAAGLADHLKAEAQRLGVTWLHGLRWSQVAFAPPLRS*
Ga0181538_101582752	3300014162	Bog	VIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEDRRLGVHRLHGLRWCQVAFAHSSCP*
Ga0181538_105249382	3300014162	Bog	AESWLETVAQFGRRFHRAVGFADHLKAEAQRLGVNWLQGVRSSQVAFAHTPCP*
Ga0181538_105781451	3300014162	Bog	MWMAPAALSQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPSP*
Ga0181532_105753232	3300014164	Bog	RLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVSWLQGVRSSQVAFAYSPCP*
Ga0181523_102828012	3300014165	Bog	PKRRTDTGLCALESILDRLHVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVSWLQGVRSSQVAFAHSPCP*
Ga0181523_103924242	3300014165	Bog	WLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAQSPRT*
Ga0181523_106413191	3300014165	Bog	ESWLETVAQFGRRFHRAVGFADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0181535_106854961	3300014199	Bog	DRLQVSAESWLETVAQFGRRFHLAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP*
Ga0181535_108769221	3300014199	Bog	LESILDRIQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSLCP*
Ga0181526_101033414	3300014200	Bog	ETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQMAFAHSPCP*
Ga0181526_105742962	3300014200	Bog	VIPAALASILDRLQVSAESWLETVARFGRRFHLAVGLADHLKAEAQRLGVTWLHGLRWSRVAFAPPLRS*
Ga0181526_109199631	3300014200	Bog	ILDRLQVSAESWLETVAQFGRRFHRAVGLADHLRAEAQRLGVNWLQGVRSSQVAFAHSPSP*
Ga0181515_10808951	3300016730	Peatland	WTGRELRTGAHGVIPQALESILDRLHVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVSWLQGVRSSQVAFAYSPCP
Ga0181515_15039901	3300016730	Peatland	VIPLALASILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP
Ga0187854_102768292	3300017938	Peatland	RLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP
Ga0187879_101646831	3300017946	Peatland	IPQGLESILDRLQVSAESWLETVAQFGRRFHRAVGLAEHLKDEARRLGVNWLQGVRSSQVAFAHSPCP
Ga0187879_102486753	3300017946	Peatland	LDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQMAFAHSPCP
Ga0187879_108295812	3300017946	Peatland	ETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRASQVSFAHSPCP
Ga0187778_103909201	3300017961	Tropical Peatland	MRGGTRGVIPQALASILDRLQVVAESWLETIDRFDRQFHRAVGQSDHLKAEARRLGVNRLLGLRWSQVAFVHSPCP
Ga0187816_104863251	3300017995	Freshwater Sediment	ILDRLQVSAESWLETVARFGRRFHLAVGLADHLKAEAQRLGVTWLHGLRWSQVAFAPPLR
Ga0187888_10228061	3300018008	Peatland	PQGLESILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSRVAFAHSPCP
Ga0187860_12816171	3300018014	Peatland	LESILDRLQVSAESWLETVARFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVSFAQSPCP
Ga0187872_100563871	3300018017	Peatland	RALRLQVSAESWLETIARFGGRFHRALGLSDHLKVEARRLGVNRLHGLRWSQVAFAPSPY
Ga0187872_100713531	3300018017	Peatland	LALASILDRLQVSAESWLETIARFGRQIHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP
Ga0187864_100295451	3300018022	Peatland	GLESILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSRVAFAHSPCP
Ga0187864_100876604	3300018022	Peatland	PQGLESILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKDEAQRLGVNWLQGVRSSQVAFAHSPCP
Ga0187875_102630623	3300018035	Peatland	LHVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVSWLQGVRSSQVAFAYSPCP
Ga0187875_107152721	3300018035	Peatland	LQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPSP
Ga0187883_103970371	3300018037	Peatland	SILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQMAFAHLPCL
Ga0187883_104075321	3300018037	Peatland	DRLQVSAESWLETVAQFGRRFQRAVGLADHLKAEARRLGVNWLQGVRSSQVAFTK
Ga0187855_103072801	3300018038	Peatland	ILDRLKVSAESWLETVAQFGRRFHRALGWADHPKAEAQRLGVNWLQGVRSSQVAFAHSPC
Ga0187855_104678782	3300018038	Peatland	WLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP
Ga0187871_105484401	3300018042	Peatland	RLQVSAESWLETVAQFGRRFHRAVGLADHLRAEAQRLGVNWLQGVRSSQVAFAHSPSP
Ga0187887_104519601	3300018043	Peatland	RTGAHGVIPQALESILDRLHVSAESWLETVAQFGRRFHGAVGLADHLKAEAQRLGVSWLQGVRSSQVAFAHSPCP
Ga0187769_107432661	3300018086	Tropical Peatland	MVKTSLATVARFGRRFHRAVGLAEHLQAEARRLGVAWLHGLRWSQAAFAPPLRS
Ga0187769_112135111	3300018086	Tropical Peatland	MRGGPPGVIPLALASVLDRLQVSAESWLETIARFDRQFHRAVGQSDHLKAEARRLGVNRLLGLRWSQVAFAHSHCP
Ga0187770_113438631	3300018090	Tropical Peatland	HGVIPPALGSILDRLQVSAESWLETVARFGRQFHRAVGLADHLQAEAERLGVNWLHGLRWSQAAFAHPPCP
Ga0208820_10722171	3300025576	Peatland	LRGGTRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPRP
Ga0208199_10695872	3300027497	Peatlands Soil	VIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLTDHLKVEARRLGVHRLHGLRWSQVAFAHSPCP
Ga0208044_10821301	3300027625	Peatlands Soil	LDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVSFAHSPCP
Ga0208044_11917012	3300027625	Peatlands Soil	VSAAAWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPCP
Ga0208827_10715272	3300027641	Peatlands Soil	LESILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVSFAHSPCP
Ga0209039_101079422	3300027825	Bog Forest Soil	LALASILGRLQVSAESWPETITRFGCQFHRAVGLSEHLKVEARRLGVNRLYGLRWSQVAFAHSPCS
Ga0209039_102192241	3300027825	Bog Forest Soil	LRGGTRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLCEHLKAEARRLGVNRLHGLRWSQVAFAPSPCP
Ga0310037_100433672	3300030494	Peatlands Soil	VLRGGTRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLTDHLKVEARRLGVHRLHGLRWSQVAFAHSPCP
Ga0310037_101429502	3300030494	Peatlands Soil	LDRLQLSAESWLETISRFGRQFHRAVGLSDHLKVEARRLGVSRLHGLRWSQVAFGHAPCP
Ga0310037_104866951	3300030494	Peatlands Soil	TRGVIPLALASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP
Ga0310038_103625521	3300030707	Peatlands Soil	PRGVIPLALASILDRLQVSAESWLETISRFGRQFHRAVGLSDHLKVEARRLGVSRLHGLRWSQVAFGHAPCP
Ga0311301_100629282	3300032160	Peatlands Soil	LASILDRLQVSAESWLETIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLRWSQVAFAHSPCP
Ga0311301_103186974	3300032160	Peatlands Soil	DRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVSFAHSPCP
Ga0311301_105985461	3300032160	Peatlands Soil	MRGGTRGVIPQALASILDRLQVFAESWLETIDRFDRQFHRAMGQSDHLKAEARRLGVNRLLGLRWSQVAFAHSPCP
Ga0311301_110053151	3300032160	Peatlands Soil	VSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSEVAFAHSPCL
Ga0311301_112387881	3300032160	Peatlands Soil	ILDRLQVSAESWLETVAQFGRRFHRAVGLADHLKAEAQRLGVNWLQGVRSSQVAFAHSPC
Ga0371489_0499261_29_223	3300033755	Peat Soil	LASILDRLQVSAESWLETVARFGRRFHRAVGLADHLKAEAQRLGVAWLHGLRWSQAAFALPLRS
Ga0334804_069643_66_260	3300033818	Soil	LASIRDRLQVSAESWLEKIARFGRQFHRAVGLSDHLKVEARRLGVNRLHGLLWSQVAFAHSPCP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences