Metagenome / Metatranscriptome Family F080776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080776
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	97 residues
Representative Sequence	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIAGLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Number of Associated Samples	58
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.84 %
% of genes near scaffold ends (potentially truncated)	23.68 %
% of genes from short scaffolds (< 2000 bps)	71.05 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.316 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil (29.825 % of family members)
Environment Ontology (ENVO)	Unclassified (76.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.80% β-sheet: 0.00% Coil/Unstructured: 39.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d5zw7a2	5zw7	0.81
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d5zw7a2	5zw7	0.81
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d2pg0a2	2pg0	0.8
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d2pg0a2	2pg0	0.8
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d5jsca2	5jsc	0.79
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d5jsca2	5jsc	0.79
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d3r7ka2	3r7k	0.78
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d3r7ka2	3r7k	0.78
a.213.1.2: DinB/YfiT-like putative metalloenzymes	d2hkva1	2hkv	0.77
a.213.1.2: DinB/YfiT-like putative metalloenzymes	d2hkva1	2hkv	0.77

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01594	AI-2E_transport	8.77
PF00571	CBS	8.77
PF06897	DUF1269	7.89
PF07690	MFS_1	7.89
PF02163	Peptidase_M50	4.39
PF04536	TPM_phosphatase	3.51
PF09335	SNARE_assoc	1.75
PF02687	FtsX	1.75
PF12704	MacB_PCD	1.75
PF04972	BON	1.75
PF13432	TPR_16	1.75
PF08447	PAS_3	0.88
PF03109	ABC1	0.88
PF03683	UPF0175	0.88
PF01261	AP_endonuc_2	0.88
PF02371	Transposase_20	0.88
PF01435	Peptidase_M48	0.88
PF03729	DUF308	0.88
PF00535	Glycos_transf_2	0.88
PF02635	DrsE	0.88
PF00582	Usp	0.88
PF01804	Penicil_amidase	0.88
PF00072	Response_reg	0.88
PF04011	LemA	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	8.77
COG4803	Uncharacterized membrane protein	Function unknown [S]	7.89
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.75
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.75
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.75
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.88
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.88
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.82 %
Unclassified	root	N/A	23.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.89 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.89 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.89 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.89 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.89 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	2.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.88 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.89 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2.63 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.88 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10003393	All Organisms → cellular organisms → Bacteria	4760	Open in IMG/M
3300003218\|JGI26339J46600_10077440	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300004152\|Ga0062386_100198626	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300004152\|Ga0062386_100482304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1005	Open in IMG/M
3300004152\|Ga0062386_100662029	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300004476\|Ga0068966_1389503	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300009549\|Ga0116137_1110317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300009616\|Ga0116111_1134455	Not Available	597	Open in IMG/M
3300009643\|Ga0116110_1021235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2514	Open in IMG/M
3300009644\|Ga0116121_1122346	Not Available	818	Open in IMG/M
3300009645\|Ga0116106_1030837	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300009646\|Ga0116132_1224703	Not Available	570	Open in IMG/M
3300010339\|Ga0074046_10024183	All Organisms → cellular organisms → Bacteria → Acidobacteria	4213	Open in IMG/M
3300010339\|Ga0074046_10027164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	3930	Open in IMG/M
3300010339\|Ga0074046_10141492	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300010339\|Ga0074046_10314281	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300010339\|Ga0074046_10422133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300010341\|Ga0074045_10336003	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300010343\|Ga0074044_10082517	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300011089\|Ga0138573_1151689	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300014155\|Ga0181524_10056871	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300014155\|Ga0181524_10182591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300014158\|Ga0181521_10198685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300014162\|Ga0181538_10426564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300014165\|Ga0181523_10266987	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300014165\|Ga0181523_10355061	Not Available	821	Open in IMG/M
3300014199\|Ga0181535_10123796	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300017823\|Ga0187818_10008679	All Organisms → cellular organisms → Bacteria	4338	Open in IMG/M
3300017823\|Ga0187818_10591296	Not Available	501	Open in IMG/M
3300017929\|Ga0187849_1123061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300017929\|Ga0187849_1369359	Not Available	527	Open in IMG/M
3300017934\|Ga0187803_10009895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3806	Open in IMG/M
3300017935\|Ga0187848_10118819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300017938\|Ga0187854_10112412	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300017940\|Ga0187853_10212118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300017943\|Ga0187819_10477117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300017955\|Ga0187817_10557272	Not Available	731	Open in IMG/M
3300017996\|Ga0187891_1222645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300018001\|Ga0187815_10003058	All Organisms → cellular organisms → Bacteria	7716	Open in IMG/M
3300018008\|Ga0187888_1211824	Not Available	765	Open in IMG/M
3300018009\|Ga0187884_10204193	Not Available	814	Open in IMG/M
3300018014\|Ga0187860_1123171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300018014\|Ga0187860_1208692	Not Available	796	Open in IMG/M
3300018016\|Ga0187880_1053166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2153	Open in IMG/M
3300018016\|Ga0187880_1085509	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300018017\|Ga0187872_10194178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300018019\|Ga0187874_10343213	Not Available	605	Open in IMG/M
3300018020\|Ga0187861_10456247	Not Available	531	Open in IMG/M
3300018030\|Ga0187869_10151248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1151	Open in IMG/M
3300018030\|Ga0187869_10294147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300018033\|Ga0187867_10028214	All Organisms → cellular organisms → Bacteria	3528	Open in IMG/M
3300018033\|Ga0187867_10141486	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300018035\|Ga0187875_10179004	All Organisms → cellular organisms → Bacteria → Acidobacteria	1176	Open in IMG/M
3300018040\|Ga0187862_10305805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300018040\|Ga0187862_10655140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300018044\|Ga0187890_10376034	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300018046\|Ga0187851_10089261	All Organisms → cellular organisms → Bacteria → Acidobacteria	1930	Open in IMG/M
3300018057\|Ga0187858_10176998	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300018062\|Ga0187784_10760134	Not Available	774	Open in IMG/M
3300018062\|Ga0187784_10769587	Not Available	769	Open in IMG/M
3300018086\|Ga0187769_10038708	All Organisms → cellular organisms → Bacteria	3272	Open in IMG/M
3300018088\|Ga0187771_10447986	Not Available	1090	Open in IMG/M
3300018088\|Ga0187771_11864618	Not Available	510	Open in IMG/M
3300018090\|Ga0187770_11405560	Not Available	567	Open in IMG/M
3300019082\|Ga0187852_1160859	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300019082\|Ga0187852_1252239	Not Available	713	Open in IMG/M
3300025473\|Ga0208190_1063403	Not Available	756	Open in IMG/M
3300027825\|Ga0209039_10000152	All Organisms → cellular organisms → Bacteria	63443	Open in IMG/M
3300027825\|Ga0209039_10057594	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300027825\|Ga0209039_10089529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1333	Open in IMG/M
3300027825\|Ga0209039_10173735	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300032770\|Ga0335085_10117854	All Organisms → cellular organisms → Bacteria	3396	Open in IMG/M
3300032828\|Ga0335080_12286204	Not Available	518	Open in IMG/M
3300032829\|Ga0335070_10132660	Not Available	2559	Open in IMG/M
3300032893\|Ga0335069_10108889	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300032897\|Ga0335071_11426393	Not Available	637	Open in IMG/M
3300033402\|Ga0326728_10000115	All Organisms → cellular organisms → Bacteria	322233	Open in IMG/M
3300033402\|Ga0326728_10000664	All Organisms → cellular organisms → Bacteria	131334	Open in IMG/M
3300033402\|Ga0326728_10001236	All Organisms → cellular organisms → Bacteria	91647	Open in IMG/M
3300033402\|Ga0326728_10002349	All Organisms → cellular organisms → Bacteria	63448	Open in IMG/M
3300033402\|Ga0326728_10002519	All Organisms → cellular organisms → Bacteria	60503	Open in IMG/M
3300033402\|Ga0326728_10003273	All Organisms → cellular organisms → Bacteria	50886	Open in IMG/M
3300033402\|Ga0326728_10003347	All Organisms → cellular organisms → Bacteria	50189	Open in IMG/M
3300033402\|Ga0326728_10005627	All Organisms → cellular organisms → Bacteria	34795	Open in IMG/M
3300033402\|Ga0326728_10007135	All Organisms → cellular organisms → Bacteria	29198	Open in IMG/M
3300033402\|Ga0326728_10007622	All Organisms → cellular organisms → Bacteria	27585	Open in IMG/M
3300033402\|Ga0326728_10018675	All Organisms → cellular organisms → Bacteria	13613	Open in IMG/M
3300033402\|Ga0326728_10044317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6769	Open in IMG/M
3300033402\|Ga0326728_10054038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5761	Open in IMG/M
3300033402\|Ga0326728_10119113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3047	Open in IMG/M
3300033402\|Ga0326728_10131768	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300033402\|Ga0326728_10226981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1824	Open in IMG/M
3300033402\|Ga0326728_10238496	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300033402\|Ga0326728_10259296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1643	Open in IMG/M
3300033402\|Ga0326728_10372154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300033402\|Ga0326728_10388547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1201	Open in IMG/M
3300033402\|Ga0326728_10725827	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300033402\|Ga0326728_10733782	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300033402\|Ga0326728_10745146	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300033402\|Ga0326728_10849176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300033402\|Ga0326728_10961583	Not Available	597	Open in IMG/M
3300033402\|Ga0326728_11142164	Not Available	523	Open in IMG/M
3300033405\|Ga0326727_10176661	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300033405\|Ga0326727_10244675	Not Available	1864	Open in IMG/M
3300033405\|Ga0326727_10302831	All Organisms → cellular organisms → Bacteria → Acidobacteria	1572	Open in IMG/M
3300033405\|Ga0326727_10489781	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300033405\|Ga0326727_10533489	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300033977\|Ga0314861_0034403	All Organisms → cellular organisms → Bacteria → Acidobacteria	2975	Open in IMG/M
3300033977\|Ga0314861_0091880	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1568	Open in IMG/M
3300033977\|Ga0314861_0120330	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300033977\|Ga0314861_0322396	Not Available	692	Open in IMG/M
3300034091\|Ga0326724_0110369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1782	Open in IMG/M
3300034091\|Ga0326724_0112365	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300034091\|Ga0326724_0435627	Not Available	686	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.88%
Aquatic	Environmental → Aquatic	49.12%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.12%
Peat	Environmental → Terrestrial → Peat	29.82%
Soil	Environmental → Terrestrial → Soil	21.05%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	49.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	29.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	37.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	29.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.30%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	29.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	23.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.14%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	6.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.39%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	3.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100033935	3300003218	Bog Forest Soil	MATFEENVSAQLEKTKSQMKEIESLAKGIASQAEMDAINDLKSKKQELTKKLQDMTTSADTKAKAEIEADLAKLNVLLGQVVTSLRSHAAPRPPAQQK*
JGI26339J46600_100774402	3300003218	Bog Forest Soil	MGEFEENVSAQLDKSKSQMKEIEALAKGNASQAETDAINGLKNKGQELDKKFQDLKTSADTKAKAAIEADLSKLNVSLGQVATSLKSHSASK*
Ga0062386_1001986261	3300004152	Bog Forest Soil	MADKTFEENVSAQLAKSKSQMKEIEALAKGKASQVEIDTIAGLKNKKQEIEKKLQTLKTSADTKAKAAIETDLAKFNDWLGQALTTLKGQATSTPGQQK*
Ga0062386_1004823041	3300004152	Bog Forest Soil	MKEIEALAKGKASQAAIDTIARLKNKKQEIEKKVQALKNSADTKAKAAIETDLAKFNDSLGQVVTTLKGQATSTPGQQK*
Ga0062386_1006620292	3300004152	Bog Forest Soil	MAEFEENVSAQLEKSKSQMKEIETLAKGNASQAEIDAINGLKNKRQEITNKLQDLKTSADTKAKAAILTDLAKFNDSLGQVVTKLKSHAATKTPGQQK*
Ga0068966_13895032	3300004476	Peatlands Soil	MAEFQENFRAQWEKSKSQMQEIEALAKGNASQAVTDAINSLKNKGQEIDKQVQDLKSSTETKAKATIETNMAKFNDLLGQVAAKLKSQPASK
Ga0116137_11103172	3300009549	Peatland	MSIEEERHRVTKPQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK*
Ga0116111_11344551	3300009616	Peatland	MSIEEERHRVTKPQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK*
Ga0116110_10212351	3300009643	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLGQVATKLKSHTAAK*
Ga0116121_11223462	3300009644	Peatland	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIARLKNRGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGQVVTTLKGHSTP
Ga0116106_10308371	3300009645	Peatland	MAEETKTFEETVRSQLEKSKSQMEEIEVLAKGSVSQAVNDAINGLKNKRQEIANKFQGLKTSAETKAKTEIQADLEKFNVMLGQVAAKLKSPAPSK*
Ga0116132_12247031	3300009646	Peatland	LEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLGQVATKLKSHTAAK*
Ga0074046_100241833	3300010339	Bog Forest Soil	VKSTWTRRRITADKTFEENVSAQLAKSRSHMKEIEALAKGKASQAAIDTIARLKNKKQEIEKKVQALKNSADTKAKAAIETDLAKFNDSLGQVVTTLKGQATSTPGQQK*
Ga0074046_100271646	3300010339	Bog Forest Soil	LAFVLPNDRRASKRNVTGVTKPHGEINSDKTERKTIMADKTFEENVSAQLAKSKSQMKEIEALAKGKASQVEIDTIAGLKNKKQEIEKKLQTLKTSADTKAKAAIETDLAKFNDWLGQALTTLKGQATSTPGQQK*
Ga0074046_101414923	3300010339	Bog Forest Soil	EVKSNQRRTIMAEETKTFEETVRSQLEKSKSQMEEIEALAKGRASQAVNDAINGLKNKRQEIAKKLQGLKISADTKAKAEIVADLDKFNVVLGQVATKLKSHTASNN*
Ga0074046_103142811	3300010339	Bog Forest Soil	SLALAFVLPNQRERSRRNVTGVTKTHGQINPHKTERRTIMAEFEENVSAQLEKSKSQMKEIETLAKGNASQAEIDAINGLKNKRQEITNKLQDLKTSADTKAKAAILTDLAKFNDSLGQVVTKLKSHAATKTPGQQK*
Ga0074046_104221331	3300010339	Bog Forest Soil	MIMGEFEENVSAQLDKSKSQMKEIEALAQGNASQAETDAINGLKNKGQELDKKFQDLKTSADTKAKAAIEADLSKLNVSLGQVATSLKSHSASK*
Ga0074045_103360032	3300010341	Bog Forest Soil	VTKTHGQINPHKTERRTIMAEFEENVSAQLEKSKSQMKEIETLAKGNASQAEIDAINGLKNKRQEITNKLQDLKTSADTKAKAAILTDLAKFNDSLGQVVTKLKSHAATKTPGQQK*
Ga0074044_100825173	3300010343	Bog Forest Soil	MAEETKTFEETVRSQLEKSKSQMEEIEALAKGRTSQAVNDAINGLKNKRQEIAKKLQGLKTSADTKAKAEIEADLDKFNVVLGQVATKLKSPTASK*
Ga0138573_11516892	3300011089	Peatlands Soil	MAEFQENFRAQWEKSKSQMQEIEALAKGNASQAVTDAINSLKNKGQEIDKQVQDLKSSTETKAKATIETNMAKFNDLLGQVAAKLKSQPASKTPAQHN*
Ga0181524_100568714	3300014155	Bog	MREIPAKRRTIMADKTFEENVRAQWEKSKSQLQEIQTLAKGIASQKVTDTINGLKNKRQELDKKVQDLKASADTKAKATIEAELAKFNDSLGQVAASLKSQARKQDGC*
Ga0181524_101825912	3300014155	Bog	MSIEEERHRVTKPQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQ
Ga0181521_101986851	3300014158	Bog	MAEETRTFEENVRAQLQKSVSQMKEIEALAKGRASQAEIDAINALKKKRREIDTKYQELKTSAETKAKAEIVADLDKFNVVLGQVATRLKSHTAAK*
Ga0181538_104265641	3300014162	Bog	DKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK*
Ga0181523_102669872	3300014165	Bog	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIARLKNRGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGHVVTTLKGHSTPAQ*
Ga0181523_103550611	3300014165	Bog	MSIEEERHRVTKPQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDL
Ga0181535_101237962	3300014199	Bog	MAEETKTFEETVRSQLEKSKSQMEEIEVLAKGRASQAEIDAINGLNNKRQEIATKLQALKTSAETKAKAEIVADLDKFNVVLGQVATKLKSHTAAK*
Ga0187818_100086795	3300017823	Freshwater Sediment	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVTDTIAGLKSKRQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGQVVTTLKGHATPAQQK
Ga0187818_105912961	3300017823	Freshwater Sediment	SKSQIKEIETLAKGKASQAAIDTINNLKNKRQEILQKVQQLKTSADTKAKTAIETDLAKFNDSLGQVATALKGHATSTPGQQK
Ga0187849_11230611	3300017929	Peatland	MSIEEERHRVTKPQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187849_13693591	3300017929	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSANAKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0187803_100098952	3300017934	Freshwater Sediment	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLGQVATKLKSHTAAK
Ga0187848_101188191	3300017935	Peatland	MAEATKTFEETVRSQLEKSKSQMEEIEALIKERVSETENDAINSLNNKRQEVAKKFQALKTSADTKAKAEIVANLDKLNVVLGQVATKLKSHTASK
Ga0187854_101124122	3300017938	Peatland	VADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187853_102121182	3300017940	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDRFNVVLGQVATKLKSHTASK
Ga0187819_104771171	3300017943	Freshwater Sediment	MAEGTKTFEETVRSQLEKSKSQMEEIEALAKGSVSQAVNDTINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLGQ
Ga0187817_105572721	3300017955	Freshwater Sediment	MAEETKTFEETVRSQLEKSKSQMEEIEALAKGSVSQAVNDTINGLKNKRQEIANKFQGLKTSVDTKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0187891_12226452	3300017996	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGRASQAVNDAINGLKNKRQEIAQKVQGLKTSADTKVKAEIQADLDKF
Ga0187815_100030589	3300018001	Freshwater Sediment	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVTDTIAGLKSKRQEIEKKVQALRTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPAQQK
Ga0187888_12118241	3300018008	Peatland	KSQMEEIEVLAKGSVSQAVNDAINGLKNKRQEIANKFQGLKTSADTKAKAEIVADLDKFNVVLGQVATKLKSHTAAK
Ga0187884_102041931	3300018009	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADTKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0187860_11231711	3300018014	Peatland	VADKTFEENAKAQLAKSKSRIKEIEALAKGKASQAMIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187860_12086921	3300018014	Peatland	MAEETKTFEETVRSQLEKSKSQIEEIKALAKGIASQAENDAINGLNNKRQEIATKFQGLKTSADTKAKAEIVANLDKLNVALGQVAAKLKSHAASK
Ga0187880_10531663	3300018016	Peatland	MAEETRTFEENVRAQLQKSVSQMKEIEALAKGRASQAEIDAISALKKKRREIDTKFQELKTSAETKAKAEIVADLDKFNVVLGQVATTLKSHTAVK
Ga0187880_10855092	3300018016	Peatland	VADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187872_101941781	3300018017	Peatland	VADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKEQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187874_103432131	3300018019	Peatland	MAEETRTFEENVRAQLQKSVSQMKEIEAFAKGRASQAEIDAINALKKKRQEIDTKYQELKTSAETKAKTEIQADLEKFNVMLGQVAAKLKSHAASK
Ga0187861_104562471	3300018020	Peatland	VADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKGQEIEKKVQALKTSARTKVKAEIETDLAKFNDALGQVVTTLKGQATPT
Ga0187869_101512481	3300018030	Peatland	MSIEEERHRVTKPQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKRQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187869_102941471	3300018030	Peatland	MTEETRTFEENVRAQLQKSVSQMKEIEALAKGRASQAEIDAISALKKKRREIDTKFQELKTSAETKAKAEIVADLDKFNVVL
Ga0187867_100282145	3300018033	Peatland	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIAGLKNKGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGQVVTALKGHATPAQQK
Ga0187867_101414861	3300018033	Peatland	KSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLGQVATKLKSHTAAK
Ga0187875_101790043	3300018035	Peatland	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIAGLKNKGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALG
Ga0187862_103058052	3300018040	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEITNKFQGLKTSADAKAKAEIVADLDKFNVVLGQVATKLKSHTAAK
Ga0187862_106551402	3300018040	Peatland	PQIDWNETERRTIVADKTFEENAKAQLAKSKSQIKEIEALAKGKASQAVIDTIASLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187890_103760341	3300018044	Peatland	MAEETKTFEETVRSQLERSKSQMEEIEALAKGKASQAVIDTIARLKNRGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGHVVTTLKGHSTPAQ
Ga0187851_100892612	3300018046	Peatland	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIARLKNRGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGHVVTTLKGHSTPAQ
Ga0187858_101769981	3300018057	Peatland	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIAGLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0187784_107601341	3300018062	Tropical Peatland	MTDKTFQENVKAQLAKSKSQMKEIAALAKGKASQAALDTIAGLENKRQEIEKKVQALKTSADTKAKAAIETDLAKFNDALGQVATTLKSQTQAPGQQK
Ga0187784_107695871	3300018062	Tropical Peatland	MAEETKTFEETVRSQLEKSKSQMEEIEALAKGSVSQVVNDTINGLKSKRQEIANKFQGVKTSADTEAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0187769_100387081	3300018086	Tropical Peatland	MAEETKTFEETVRSQLEKSKSQMEEIEALAKGSVSQVVNDTINGLKSKRQEIANKFQGLKTSADTKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0187771_104479862	3300018088	Tropical Peatland	MAEETKTFEETVRSQLEKSKSQMEEIEALAKGSVSQAVNDTINGLKSKRQEIANKFQGLKTSADTEAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0187771_118646181	3300018088	Tropical Peatland	NRLARDGKENDMADKTFQENVKAQLAKSKSQMKEIAALAKGKASQAALDTIAGLENKRQEIEKKVQALKTSADTKAKAAIETDLSKFNDALGQVATTLKSQTPAPGQQK
Ga0187770_114055601	3300018090	Tropical Peatland	MADKTFQENVKAQLAKSKSQMKEIAALAKGKASQAALDTIAGLENKRQEIEKKVQALKTSANTKAKAAIETDLVKFNDALGQVATTLKSQTPAPGQQK
Ga0187852_11608591	3300019082	Peatland	MAEETKTFEETVRSQLEKSKSQIEEIKALAKGRASQSEIDAINGLNNKRQEIATKLQALKTSAETKTKTEIQADLDKFNVMLGQVAAKLKSPAPSK
Ga0187852_12522391	3300019082	Peatland	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLRQVATKLKSHTAAK
Ga0208190_10634031	3300025473	Peatland	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIARLKNRGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGH
Ga0209039_1000015258	3300027825	Bog Forest Soil	MATFEENVSAQLEKTKSQMKEIESLAKGIASQAEMDAINDLKSKKQELTKKLQDMTTSADTKAKAEIEADLAKLNVLLGQVVTSLRSHAAPRPPAQQK
Ga0209039_100575942	3300027825	Bog Forest Soil	MGEFEENVSAQLDKSKSQMKEIEALAKGNASQAETDAINGLKNKGQELDKKFQDLKTSADTKAKAAIEADLSKLNVSLGQVATSLKSHSASK
Ga0209039_100895292	3300027825	Bog Forest Soil	MKEIEALAKGKASQAAIDTIARLKNKKQEIEKKVQALKNSADTKAKAAIETDLAKFNDSLGQVVTTLKGQATSTPGQQK
Ga0209039_101737351	3300027825	Bog Forest Soil	MADKTFEENVSAQLAKSKSQMKEIEALAKGKASQVEIDTIAGLKNKKQEIEKKLQTLKTSADTKAKAAIETDLAKFNDWLGQALTTLKGQATSTPGQQK
Ga0335085_101178544	3300032770	Soil	MAEETKTFEETVRSQLEKSKSQVEEIEALAKGTLSQAVNDAINGLKNKRQEIANKFQGLKTSADAKAKAEIVADLDKFNVVLGQVATKLKSHTAAK
Ga0335080_122862041	3300032828	Soil	MAEETKTFEETVRSQVENSKSQMEEIEALAKGSVSQAVNDAINGLKNKWQEIANKFQELKTSADTKAKAEIVADLDKFNVVLGQVATKLK
Ga0335070_101326604	3300032829	Soil	MAEETKTFEETIRSQLEKSKSQMEEIEALAKGSLSQAVNDAINGLKNKRQEIANKFQGLKTSADTKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0335069_101088891	3300032893	Soil	MADETKTFVDNVSAQLEKSKSQLQEIEALGKTRASQAVNAAVKGLKKKSREIDKKYQGLKTSADTKVKAEIQADLEKFNVALAQ
Ga0335071_114263931	3300032897	Soil	MAEETKTFEETVRSQVENSKSQMEEIEALAKGSVSQAVNDAINGLKNKWQEIANKFQELKTSADTKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0326728_10000115214	3300033402	Peat Soil	MADDTKTFEENVRAQLQKSVSQMKEIEALAKGKASQAQTDAINALKNKKQEIDTKYQGLKTSADTKAKAEIQADLDKFNVMLGQVASKLKGPAPSK
Ga0326728_1000066486	3300033402	Peat Soil	VPEKTPTFEENVSAQLEKSKSQIKEIEGLAKGIASQAETDAINALKNKRQEIEKKYQELKTSASTKAKAAIETDLAKFNDSLGQVATKLKNLAASKPPAQQK
Ga0326728_1000123670	3300033402	Peat Soil	MTDKTFEENVKAQLAKSKSQMKEIAALAKGKASQAEIDTIAGLKNKGQEIEKKVQVLKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPAQQK
Ga0326728_1000234921	3300033402	Peat Soil	MAEFEQNVSAQLEKSKSQIKEIETLAKGKASQAEIDAINSLKSKRREISQKLQDLKTSVDTKAKAVIEADLTKLNDSLGQVATKLKSNAASK
Ga0326728_1000251932	3300033402	Peat Soil	MAEFEVKVRAQLKTSKSLMKQIETLAKGMAAQAEIDAINSLKSKRQEVEKNVQDLKTSADTKAKAAVETSLAKFNDSLRQVVTKLKSQAASKSATSRQQK
Ga0326728_1000327341	3300033402	Peat Soil	MADKTFEQNITAQLETSKSQMKEIETLAKGKASQAQIDTINTLKNKRQEILNKVQQLKTSADTKAQTAIETDLAKFNDALGQVATALKASTPGQQK
Ga0326728_1000334739	3300033402	Peat Soil	MAEETKTFEETVRSQLEKSKSQMEEIEAVAKGSVSQAVNDTVDGLKNKRQEIANKLQGLRTSADTKAKAEIVADLDKFNVMLGQAATKLKSRTASK
Ga0326728_1000562716	3300033402	Peat Soil	MADKTFEENVRAQLAKSKSQMKEIEALAKGKASQAQIDTIAGLKNKGQEIEKKVQALKTSADTKVKAAIETDLAKFNDWLGQVVATLKGQAASTPDQQK
Ga0326728_1000713518	3300033402	Peat Soil	MAEFEENVSAQWEKSKSQMKEIEALAKGNASQTVSDAINGLKKKGQDIDKMVQDLKTSTETKTKATVEANMAKFNVLLGQVATKLKSDAAAKTAGQQK
Ga0326728_1000762225	3300033402	Peat Soil	MAEKTFEENISAQLEKSKSQIKEIETLAKGKASQAEIDTINGLKNKREEILKKVQQLKTSADTKAKTAVETDLAKFNDSLGQVATALKGHATSTPGQQK
Ga0326728_1001867514	3300033402	Peat Soil	MAENTQTFKENVKGQLEKAKSQMAEIEALTKGKVSQTELDTIDGLKNKKLELEKKLQNLGTTADTKAKAEIEADLAKLNALLGKVATNLKSQSASK
Ga0326728_100443176	3300033402	Peat Soil	MTDKTFQENVKAQLAKSKSQMKEIAALAKGKASQGALDTIAGLENKRQEIEKKVQALKTSADTKAKAVIETDLAKFNDALGQVATTLKSQTPAPGQQK
Ga0326728_100540384	3300033402	Peat Soil	MADKTFEENVRAQLEKGKSQMKEIQALAKGKASQAVIDTIAGLINKQQEIEKKVQALKTSARTKVKAEIETDLAKFNDALGQVVTTLKGQATPTQQK
Ga0326728_101191131	3300033402	Peat Soil	MADDTKTFEENVRAQLQKSVSQMKEIEALAKGKASQAQTDAINALKNKKQEIDTKYQGLKTSADTKAKAEIQADLDKFNVMLGQVAAKLKSPAPPK
Ga0326728_101317683	3300033402	Peat Soil	MAEFEENVSAQLEKSKSQMKEIETLAKGNASQAEIDAINGLKNKRQEITNKLQDLKTSADTKAKAATLTDLAKFNDSLGQVVTKLKSHAATKTPGQQK
Ga0326728_102269811	3300033402	Peat Soil	MAEETRTFEENVRAQLQKSVSQMKEIEALAKGRASQAEIDAINALKKKRREIDTKYQELKTSAETKAKAEIVADLDKFNVVLGQVATRLKSHAAAK
Ga0326728_102384962	3300033402	Peat Soil	MADKTFQEKAKAQLAKGKSQMKEIEALAKGKASQAMIDTIAGLKNKGQDIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVATTLKGHATPAQQK
Ga0326728_102592961	3300033402	Peat Soil	NVSAQLAKSKSQLKEIETLAKGKASQAAIDTIAGLKNKGQEIEKKVQAAKTSADAKAKAAIETDLAKFNDSLGQVVATLKGQATSTPGQK
Ga0326728_103721542	3300033402	Peat Soil	MADKTFEENVRAQWEKSKSQLQEIQTLAKGIASQKVTDTINGLKNKRQELDKKVQDLKASADTKAKATIEAELAKFNDSLGQVAASLRSQARKQDG
Ga0326728_103885472	3300033402	Peat Soil	MADKTFQENAKAQLAKSKSQMKEIEALAKGKASQAVIDTIAGLKNRGQEIEKKVQALKTSVDTKVKAEIETDLAKFNDALGQVVTTLKGHATPAQQK
Ga0326728_107258272	3300033402	Peat Soil	MAAFTENVKAQLEKTKSQLTEIEALAKGKASQAELDTINGLKNKKQDLEKKLQGLKASADTKAKAEIEADLAKLNDSLGQVATKLKGNTASK
Ga0326728_107337822	3300033402	Peat Soil	MADKTFEENVSAQLAKSKSQMKDIETLAKGKASQAALDAIAGLKNKKQEIEKKVQALKTSTDTKAKAAIETDLAKFNDALGQV
Ga0326728_107451462	3300033402	Peat Soil	MADKTFEDNVNAQLAKSKSQMKEIETLAKGKASQAVLDTIAGLKNKRQEIEKKAQALKTSVDTKAKAAIETDLAKFNDALGQVATTLKSQTGATGQQK
Ga0326728_108491761	3300033402	Peat Soil	EIEALAKGKASQAVIDTIASLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTLKGHATPTQQK
Ga0326728_109615831	3300033402	Peat Soil	MGSFKENVSAQLEKSKSQLKEIETLAKGNASQAVTDTINSLKNKRQDIDKKVQELTTSADTKAKAAIEADLAKFNDALGQVAAKLKSHAASTLGQQK
Ga0326728_111421641	3300033402	Peat Soil	MADKTFEENVSAQLEKSKSQMKEIETLAKGKASQAVIDTINSLKNKRQEILNKLQQLKTSADTKAKTAIETELAKFNDA
Ga0326727_101766616	3300033405	Peat Soil	MAKKTFEQNVSAQLEKSKSQMKEIETLAKGKASQAVTDTINGLKNKREEILNKVQQLKTSADTKAKTAIVTELTKFNDSLGQVATALKGNATSTPGQQK
Ga0326727_102446752	3300033405	Peat Soil	MADETKTFVDNVSAQLEKSKSQLQEIEALGKTRASQAVNDAVKGLKKKSREIDKKYQGLKTSADTKVKAEIQTDLEKFNVALGQVAAKLKTPAPSK
Ga0326727_103028311	3300033405	Peat Soil	VERPRREVKSIQRKTTTAEETKTFHETVRSQLEKSKSQIEEIEALAKGRASQAVNDAINGLMNKRQGIARKLQGLKASADTKAKAEIEADLDKLNVVLGQVATKLKSPTASK
Ga0326727_104897811	3300033405	Peat Soil	VTKTHGQINSQTERKTIMADKTFEENVSAQLEKSKSQMKEIETLAKGKASQTESDAISGLKNKRDEILKKVQELKTSTDTKAKAAIETELTKFNDSLGQIATKLKSPAASK
Ga0326727_105334891	3300033405	Peat Soil	ADDTKTFEENVRAQLQKSVSQMKEIEALAKGKASQAQTDAINALKNKKQEIDTKYQGLKTSADTKAKAEIQADLDKFNVMLGQVAAKLKSPAPPK
Ga0314861_0034403_2659_2973	3300033977	Peatland	VTKPEGEIDWHETERRTIMADKTFQENAKAQLAKGKSQMKEIEALAKGKASQAVIDTIAGLKNKGQEIEKKVQALKTSADTKVKAEIETDLAKFNDALGQVVTTL
Ga0314861_0091880_841_1137	3300033977	Peatland	MVDKTFEENVKAQLAKSKSQMKEIAALAKGKASQAALDTIAGLENKRQEIEKKVQALKTSADTKVKAAIETDLAKFNDALGRVATTLKSQTPAPGQKK
Ga0314861_0120330_529_822	3300033977	Peatland	MATFEENVNAQLEKSKSQMKEIETLAKGQASQAAIDTVNSLKNKRDEILKKVQQVKTSADAKAKTAIETELAKFNDSLGQVATALKGHAPSTPGQQK
Ga0314861_0322396_284_574	3300033977	Peatland	MAEETKTFEETVRSQLEKSKSQMEEIEALAKGSVSQAVNDTINGLKSKRQEIANKFQGLKTSADTKAKAEIVADLDKFNVVLGQVATKLKSHTASK
Ga0326724_0110369_804_1172	3300034091	Peat Soil	MSIEEERHRVTKPQIDWNETERRTIMADKTFEENVRAQLEKGKSQMKEIQALAKGKASQAVIDTIAGLINKQQEIEKKVQALKTSARTKVKAEIETDLAKFNDALGQVVTTLKGQATPTQQK
Ga0326724_0112365_276_623	3300034091	Peat Soil	MKTHGQINPHKTERRTIMAEFEENVSAQLEKSKSQMKEIETLAKGNASQAEIDAINGLKNKRQEITNKLQDLKTSADTKAKAATLTDLAKFNDSLGQVVTKLKSHAATKTPGQQK
Ga0326724_0435627_221_637	3300034091	Peat Soil	LAFVLLNDERGPGRKVTGVTNIHGQINSHRTEGRTIVPEKTPTFEENVSAQLEKSKSQIKEIEGLAKGIASQAETDAINALKNKRQEIEKKYQELKTSASTKAKAAIETDLAKFNDSLGQVATKLKNLAASKPPAQQK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences