Metagenome Family F080688

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080688
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	49 residues
Representative Sequence	MTQAEMHXTTHSDVHRSSDFEDLHEKQTVESTTSQLSEHSIEVQLSDHL
Number of Associated Samples	13
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	3.54 %
% of genes near scaffold ends (potentially truncated)	18.42 %
% of genes from short scaffolds (< 2000 bps)	15.79 %
Associated GOLD sequencing projects	13
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Eukaryota (52.632 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.84% β-sheet: 0.00% Coil/Unstructured: 44.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00078	RVT_1	54.05
PF14529	Exo_endo_phos_2	2.70
PF03184	DDE_1	1.80
PF03732	Retrotrans_gag	1.80
PF13087	AAA_12	0.90
PF12511	DUF3716	0.90
PF00125	Histone	0.90
PF12861	zf-ANAPC11	0.90
PF01288	HPPK	0.90
PF00465	Fe-ADH	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.90
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.90
COG0801	7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)	Coenzyme transport and metabolism [H]	0.90
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.90
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.68 %
Unclassified	root	N/A	26.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.63 %
Unclassified	root	N/A	26.32 %
Viruses	superkingdom	All Organisms → Viruses	21.05 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	52.63 %
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	50.00 %
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	30.70 %
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	27.19 %
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	24.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	24.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	24.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
Lecanoromycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
OSLEUM clade	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
Umbilicariomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
Umbilicariales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
Umbilicariaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
Lasallia	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia	9.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.05 %
Lasallia pustulata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	9.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300030517\|Ga0272420_1039311	All Organisms → Viruses → Predicted Viral	2557	Open in IMG/M
3300030523\|Ga0272436_1000508	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	85298	Open in IMG/M
3300030523\|Ga0272436_1000784	All Organisms → cellular organisms → Eukaryota → Opisthokonta	64450	Open in IMG/M
3300030523\|Ga0272436_1004458	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	16412	Open in IMG/M
3300030523\|Ga0272436_1007170	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	11536	Open in IMG/M
3300030523\|Ga0272436_1019047	Not Available	5122	Open in IMG/M
3300030523\|Ga0272436_1024509	All Organisms → Viruses → Predicted Viral	4037	Open in IMG/M
3300030523\|Ga0272436_1024659	All Organisms → Viruses → Predicted Viral	4015	Open in IMG/M
3300030523\|Ga0272436_1025994	All Organisms → Viruses → Predicted Viral	3820	Open in IMG/M
3300030523\|Ga0272436_1146627	Not Available	708	Open in IMG/M
3300031447\|Ga0272435_1000271	All Organisms → cellular organisms → Eukaryota → Opisthokonta	93552	Open in IMG/M
3300031447\|Ga0272435_1000271	All Organisms → cellular organisms → Eukaryota → Opisthokonta	93552	Open in IMG/M
3300031447\|Ga0272435_1000959	All Organisms → cellular organisms → Eukaryota → Opisthokonta	36808	Open in IMG/M
3300031447\|Ga0272435_1001003	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	35427	Open in IMG/M
3300031447\|Ga0272435_1001009	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	35236	Open in IMG/M
3300031447\|Ga0272435_1001952	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	21184	Open in IMG/M
3300031447\|Ga0272435_1002057	All Organisms → cellular organisms → Eukaryota → Opisthokonta	20337	Open in IMG/M
3300031447\|Ga0272435_1002612	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	16762	Open in IMG/M
3300031447\|Ga0272435_1003909	Not Available	12198	Open in IMG/M
3300031447\|Ga0272435_1003932	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	12167	Open in IMG/M
3300031447\|Ga0272435_1005005	All Organisms → cellular organisms → Eukaryota → Opisthokonta	10039	Open in IMG/M
3300031447\|Ga0272435_1006430	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	8166	Open in IMG/M
3300031447\|Ga0272435_1007038	Not Available	7575	Open in IMG/M
3300031447\|Ga0272435_1009326	Not Available	6116	Open in IMG/M
3300031447\|Ga0272435_1009659	Not Available	5956	Open in IMG/M
3300031447\|Ga0272435_1011231	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	5310	Open in IMG/M
3300031447\|Ga0272435_1013832	All Organisms → Viruses → Predicted Viral	4530	Open in IMG/M
3300031447\|Ga0272435_1015623	All Organisms → Viruses → Predicted Viral	4116	Open in IMG/M
3300031447\|Ga0272435_1016586	All Organisms → Viruses → Predicted Viral	3928	Open in IMG/M
3300031447\|Ga0272435_1018220	All Organisms → Viruses → Predicted Viral	3651	Open in IMG/M
3300031447\|Ga0272435_1022454	All Organisms → Viruses → Predicted Viral	3127	Open in IMG/M
3300031447\|Ga0272435_1026704	All Organisms → Viruses → Predicted Viral	2728	Open in IMG/M
3300031447\|Ga0272435_1031142	All Organisms → Viruses → Predicted Viral	2417	Open in IMG/M
3300031447\|Ga0272435_1072826	Not Available	1165	Open in IMG/M
3300031447\|Ga0272435_1080839	Not Available	1055	Open in IMG/M
3300031447\|Ga0272435_1085650	Not Available	999	Open in IMG/M
3300031448\|Ga0272438_1000323	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	73125	Open in IMG/M
3300031448\|Ga0272438_1000351	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	69902	Open in IMG/M
3300031448\|Ga0272438_1000415	All Organisms → cellular organisms → Eukaryota	64112	Open in IMG/M
3300031448\|Ga0272438_1000415	All Organisms → cellular organisms → Eukaryota	64112	Open in IMG/M
3300031448\|Ga0272438_1000684	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	51245	Open in IMG/M
3300031448\|Ga0272438_1001370	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	35267	Open in IMG/M
3300031448\|Ga0272438_1002637	Not Available	23861	Open in IMG/M
3300031448\|Ga0272438_1003494	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	19911	Open in IMG/M
3300031448\|Ga0272438_1009293	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	9648	Open in IMG/M
3300031448\|Ga0272438_1012900	Not Available	7487	Open in IMG/M
3300031448\|Ga0272438_1017989	Not Available	5877	Open in IMG/M
3300031448\|Ga0272438_1098788	Not Available	1640	Open in IMG/M
3300031448\|Ga0272438_1251403	Not Available	698	Open in IMG/M
3300031448\|Ga0272438_1331013	Not Available	519	Open in IMG/M
3300031449\|Ga0272429_1045813	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3503	Open in IMG/M
3300031450\|Ga0272433_10001061	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	51793	Open in IMG/M
3300031450\|Ga0272433_10001222	All Organisms → cellular organisms → Eukaryota → Opisthokonta	47248	Open in IMG/M
3300031450\|Ga0272433_10003531	Not Available	21759	Open in IMG/M
3300031450\|Ga0272433_10004723	All Organisms → cellular organisms → Eukaryota → Opisthokonta	17831	Open in IMG/M
3300031450\|Ga0272433_10005141	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	16806	Open in IMG/M
3300031450\|Ga0272433_10018573	Not Available	6654	Open in IMG/M
3300031450\|Ga0272433_10035272	Not Available	4076	Open in IMG/M
3300031453\|Ga0272425_1001868	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	37384	Open in IMG/M
3300031453\|Ga0272425_1003519	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	22983	Open in IMG/M
3300031453\|Ga0272425_1003721	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	21863	Open in IMG/M
3300031453\|Ga0272425_1006658	All Organisms → cellular organisms → Eukaryota → Opisthokonta	13101	Open in IMG/M
3300031453\|Ga0272425_1011455	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	7844	Open in IMG/M
3300031453\|Ga0272425_1014868	Not Available	6236	Open in IMG/M
3300031453\|Ga0272425_1022524	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	4397	Open in IMG/M
3300031453\|Ga0272425_1039046	All Organisms → Viruses → Predicted Viral	2834	Open in IMG/M
3300031453\|Ga0272425_1053928	All Organisms → Viruses → Predicted Viral	2201	Open in IMG/M
3300031453\|Ga0272425_1058115	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	2074	Open in IMG/M
3300031453\|Ga0272425_1060441	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	2013	Open in IMG/M
3300031453\|Ga0272425_1102407	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	1332	Open in IMG/M
3300031453\|Ga0272425_1114746	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300031453\|Ga0272425_1165445	Not Available	919	Open in IMG/M
3300031453\|Ga0272425_1180934	Not Available	857	Open in IMG/M
3300031460\|Ga0272430_1052442	Not Available	2615	Open in IMG/M
3300031460\|Ga0272430_1141287	Not Available	851	Open in IMG/M
3300031460\|Ga0272430_1151133	Not Available	776	Open in IMG/M
3300031460\|Ga0272430_1162924	All Organisms → cellular organisms → Eukaryota	697	Open in IMG/M
3300031470\|Ga0272432_1001220	All Organisms → cellular organisms → Eukaryota → Opisthokonta	35908	Open in IMG/M
3300031471\|Ga0272439_1005693	All Organisms → cellular organisms → Eukaryota → Opisthokonta	15997	Open in IMG/M
3300031471\|Ga0272439_1011475	All Organisms → cellular organisms → Eukaryota → Opisthokonta	9601	Open in IMG/M
3300031471\|Ga0272439_1018086	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	6924	Open in IMG/M
3300031471\|Ga0272439_1028484	Not Available	5024	Open in IMG/M
3300031471\|Ga0272439_1032473	All Organisms → Viruses → Predicted Viral	4569	Open in IMG/M
3300031471\|Ga0272439_1033648	All Organisms → Viruses → Predicted Viral	4448	Open in IMG/M
3300031471\|Ga0272439_1044987	All Organisms → Viruses → Predicted Viral	3582	Open in IMG/M
3300031471\|Ga0272439_1072429	All Organisms → Viruses → Predicted Viral	2429	Open in IMG/M
3300031471\|Ga0272439_1082882	All Organisms → Viruses → Predicted Viral	2157	Open in IMG/M
3300031471\|Ga0272439_1105815	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	1714	Open in IMG/M
3300031471\|Ga0272439_1169113	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300031471\|Ga0272439_1243533	Not Available	736	Open in IMG/M
3300031473\|Ga0272434_1000259	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	132810	Open in IMG/M
3300031473\|Ga0272434_1000330	All Organisms → cellular organisms → Eukaryota → Opisthokonta	121563	Open in IMG/M
3300031473\|Ga0272434_1000330	All Organisms → cellular organisms → Eukaryota → Opisthokonta	121563	Open in IMG/M
3300031473\|Ga0272434_1000463	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	102334	Open in IMG/M
3300031473\|Ga0272434_1000875	All Organisms → cellular organisms → Eukaryota → Opisthokonta	71204	Open in IMG/M
3300031473\|Ga0272434_1001160	All Organisms → cellular organisms → Eukaryota → Opisthokonta	59376	Open in IMG/M
3300031473\|Ga0272434_1001213	All Organisms → cellular organisms → Eukaryota → Opisthokonta	57815	Open in IMG/M
3300031473\|Ga0272434_1001675	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	46214	Open in IMG/M
3300031473\|Ga0272434_1002220	All Organisms → cellular organisms → Eukaryota → Opisthokonta	37363	Open in IMG/M
3300031473\|Ga0272434_1002601	All Organisms → cellular organisms → Eukaryota → Opisthokonta	33323	Open in IMG/M
3300031473\|Ga0272434_1003568	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	24652	Open in IMG/M
3300031473\|Ga0272434_1003588	Not Available	24506	Open in IMG/M
3300031473\|Ga0272434_1004720	Not Available	19008	Open in IMG/M
3300031473\|Ga0272434_1005343	Not Available	16919	Open in IMG/M
3300032162\|Ga0272424_1002025	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	37096	Open in IMG/M
3300032162\|Ga0272424_1007302	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	15970	Open in IMG/M
3300032162\|Ga0272424_1009313	All Organisms → cellular organisms → Eukaryota → Opisthokonta	13422	Open in IMG/M
3300032162\|Ga0272424_1021241	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata	7117	Open in IMG/M
3300032162\|Ga0272424_1044149	All Organisms → Viruses → Predicted Viral	3728	Open in IMG/M
3300032162\|Ga0272424_1058471	All Organisms → Viruses → Predicted Viral	2825	Open in IMG/M
3300032162\|Ga0272424_1062790	All Organisms → Viruses → Predicted Viral	2627	Open in IMG/M
3300032162\|Ga0272424_1138073	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300033168\|Ga0272423_1005060	All Organisms → cellular organisms → Eukaryota → Opisthokonta	12028	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300030517	Rock endolithic microbial communities from Victoria Land, Antarctica - Battleship Promontory nord	Environmental	Open in IMG/M
3300030523	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak white sandstone	Environmental	Open in IMG/M
3300031447	Rock endolithic microbial communities from Victoria Land, Antarctica - Ricker Hills nord	Environmental	Open in IMG/M
3300031448	Rock endolithic microbial communities from Victoria Land, Antarctica - Knobhead nord	Environmental	Open in IMG/M
3300031449	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt sud	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031453	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte sud	Environmental	Open in IMG/M
3300031460	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace nord	Environmental	Open in IMG/M
3300031470	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley nord	Environmental	Open in IMG/M
3300031471	Rock endolithic microbial communities from Victoria Land, Antarctica - Knobhead sud	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300032162	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte nord	Environmental	Open in IMG/M
3300033168	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand sud	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0272420_10393114	3300030517	Rock	MTQAEMHXTTHSDVHRSSDFEDLHEKQTVESTTSQLSEHSIEVQLSDHL
Ga0272436_100050842	3300030523	Rock	MYQITHSDIHQSSSSEDFHEKQTADSTSSQLSEHSIEVQFSDHL
Ga0272436_100078414	3300030523	Rock	MFQTLMIQAEMHXTIHLDVHXSSDFENLHEKQTVESTISQLSEHFIKV
Ga0272436_100445813	3300030523	Rock	MHXTTHSNVHXSLDFEDFYEKQTVESMTSQLSEHSIKVQLSDHI
Ga0272436_10071704	3300030523	Rock	MTXIEMHXTTHLNVHXSSDFEDLHEKQTVESMTSQLSEHSIEVQLSDHL
Ga0272436_10190473	3300030523	Rock	MHXTTHSDVHQSSDFENFHKKQTVKLMTSQLSEHSIKVQLSDHF
Ga0272436_10245093	3300030523	Rock	MFQTLMTQAEMHXTIHSDIHQSSNFEDLYEKQTVESMTSQLSEHFIKVQLSDHL
Ga0272436_10246591	3300030523	Rock	MYXITHSDIHXSSSSENLHEKQTAESISSQLSEHSIKVQFSDYF
Ga0272436_10259941	3300030523	Rock	HSDIHQSSSFENLHEKQTAESTISQLSEHSIKVQFSNHF
Ga0272436_11466271	3300030523	Rock	DVHRSSDFEDLHEKQTVESMTSQLSEHSIEVQLSDHL
Ga0272435_100027161	3300031447	Rock	MYXIIHSDIHXSSSSEDLHEKQTAESTLSQLSEHSIEVQFSNHL
Ga0272435_100027173	3300031447	Rock	MFXTLMTXAEMHXTTHSDVHXSSDFENLFEKQTVESMTSQLSEHSIEVQLSNHL
Ga0272435_100095935	3300031447	Rock	MYXITHSDIHXSLSSENLHEKQTVESTSSQLSEHSIKVQFSDHL
Ga0272435_100100329	3300031447	Rock	MHXTTHLNVHXSSDFENLHEKQTVKSTTSQLSEHFIKVQLSDHL
Ga0272435_100100914	3300031447	Rock	MHXTTHSDVHXSSDFEDFYEKQTVELMTSQLSEHFIKVQLSDHL
Ga0272435_100195218	3300031447	Rock	MTQAEMYXITHSDIYQSSSSEDLHEKQTAKLMSSQLSEHSVEVQFSDHF
Ga0272435_10020572	3300031447	Rock	MLQTLMIXAEMHXTTYSDVHQSSNFENLHEKQTVESTTSQLSEHSIEVQLSDHL
Ga0272435_10026124	3300031447	Rock	MHXTTHLNVHQSSDFENLHEKQIVELTSSQLSEHFIEVQLSDHL
Ga0272435_10039098	3300031447	Rock	MFQTLMTXAEMHXITHSDVHQSSDFEDLHEKQTVKLMINQLSEHSIEVQFSDHF
Ga0272435_10039324	3300031447	Rock	MIQAEMHXTTHSDVHQSSDFEDLYEKQTVESMISQLFEHFIEVQLSDHL
Ga0272435_10050059	3300031447	Rock	MTXAEMYXITYSDIHQSSSSENLHEKQITESTSSQLSEHSIEVQFSDHL
Ga0272435_10064306	3300031447	Rock	MHXTTHSDVHXSLDFEDLHEKQTVESMTSQLSEHSIEVQLSDHF
Ga0272435_10070389	3300031447	Rock	MYXIIHSDIHQSSSSEDLHEKQTAESTLSKLSEHSIKVQFSDHL
Ga0272435_10093262	3300031447	Rock	MLQTLMTXAEMHXTTHSDVHXSSNFENLHEKQTVESMTSQLFKHSIKVQLSDHL
Ga0272435_10096595	3300031447	Rock	MLXTLTTQAEMHXTTHSDVHRSSDFEDLHEKQTVESMISQLSEHSIEVQLSNHL
Ga0272435_10112315	3300031447	Rock	MTQAEMHXITHSDVHQSSNFKDLHEKQTVELMISQLSEHSIEVQLSDHL
Ga0272435_10138325	3300031447	Rock	MIQAEMHXITHSDVHXSSDFEDLHEKQIVESTTSQLSEHSIEIQLSDHL
Ga0272435_10156233	3300031447	Rock	MTQAEMYXITHSDIHXSSSSEDFHEKQTAELMSSQLSEHSIEVQFLDSL
Ga0272435_10165865	3300031447	Rock	MLXTLTTQAEMHXTTHSDVHQSSDFEDLHEKQTVESMISQLSEHSIEVQLSDHL
Ga0272435_10182203	3300031447	Rock	MTQAEMYXITHLDIHRSLSSEDLHEKQTAESTSSQLSEHSIKVQFSDHLXIRQNEY
Ga0272435_10224544	3300031447	Rock	MHXTINSNVHQSSDFENLYEKQTIKSMTSQLLKHFIEVQLSDHL
Ga0272435_10267044	3300031447	Rock	MYXITHLNIHXSSSSEDLHEKQTAESTSSQLSEHFIEVQFSDHL
Ga0272435_10311421	3300031447	Rock	MYXITHSDIHQSSSSEDLHEKQTAESTLNQLSEHSIEVQFS
Ga0272435_10728262	3300031447	Rock	MFXTLMTXAEMHXTTYSDVDXSSDFKDLHEKQTVESMTSQLSEHSIEVQLSNYF
Ga0272435_10808392	3300031447	Rock	MLXTLMTQAKMHXTTHSDIHQSSDFEDLHEKQTVESMISQLSEHSIKVQLSNHL
Ga0272435_10856502	3300031447	Rock	MLXTLMTQAEMHXTTYSDVHQSSDFKDLHEKQTVESMISQLFEHSIEVQLSDHL
Ga0272438_100032357	3300031448	Rock	MTXAEMHXTIHSNVHXSSDFKDLHEKQTVELITSQLSEHSIEVQLSDHL
Ga0272438_100035125	3300031448	Rock	MIXAEVHXTTHSDVHQSSDFEDLYEKQIVESMTSQLSEHSIEVQLSDHL
Ga0272438_100041511	3300031448	Rock	MLQTLMIXAEMHXTTYLDVHQSSDFEDLYEKQTVELMTSQLSEHSIEVQLSDHF
Ga0272438_100041543	3300031448	Rock	MFXTLMTXAEMHXTTHSDVHQSSDFEDLHEKQTVESTTSQLSERSIEVQLSDHFQIRQNE
Ga0272438_100068421	3300031448	Rock	MLQTLMTXAEMHXTIHSDIHQLSDFEDFHEKQTVESMTSQLFEHSIKVQLSNYL
Ga0272438_10013703	3300031448	Rock	MLRTLTTQAEMHXTTHLDVHQSSDFEDFHEKQTVESMTSQLPKRFIEVQLSDHL
Ga0272438_100263725	3300031448	Rock	MLXTLMTXIEMHXITHSDVHQSSDFEDFYEKQTVESMTSQLSEHSIEVQISNHL
Ga0272438_100349421	3300031448	Rock	MTQAEMHXIIHSDVHXSSDFKDLHEKQTVESMTSQLSEHFIEVQLSDHLXIRQNEH
Ga0272438_10092936	3300031448	Rock	MLQTLITXAEMHXTTHSNVYXSSDFEDLHEKQTVESITSQLSEHFIEVQLSDHL
Ga0272438_10129008	3300031448	Rock	MLRTLMTXIEMHXTTHLNVHXSSDFEDLHEKQTVESMTSQLSEHSIEVQLSDHL
Ga0272438_10179893	3300031448	Rock	MLXTLMTXAEMHXTIHSDVHRSSDFENLHEKQTVKSITSQLFEHSIEVQLSNHL
Ga0272438_10987881	3300031448	Rock	MHXTIYSDVHQSSDFENLHEKQTIKSITSQLLKHFIEVQLSDHF
Ga0272438_12514031	3300031448	Rock	MFQALMTXAEMHXTIHSDVYQSSDFENLHEKQTIESMTSQLLEHFIEVQLSDHL
Ga0272438_13310132	3300031448	Rock	TRAEMHXTTHSDVHQSSNFENLHEKQTVESMISQLSEHSIEVQLSDHL
Ga0272429_10458132	3300031449	Rock	MHQVTHSDIHQSSDFEDFHEKQIVNLISSQLSKHFIKVQLSDHISIR
Ga0272433_100010615	3300031450	Rock	MYXITHSDIHXSLSSENLHEKQTAESMSSQLSEHSIEVQFSDHL
Ga0272433_1000122215	3300031450	Rock	MHXTTHSDVYXSSDFEDLHEKQTVESMINQLSERSIEVQLSDHL
Ga0272433_1000353113	3300031450	Rock	MLQTLMIXAEMHXTTYLDVHQSSDFEDLHEKQTVELMTSQLSEHSIEVQLSDYF
Ga0272433_100047231	3300031450	Rock	HSDVHRSSDFEDLHEKQTVESMTSQLSERSIEVQLSDHL
Ga0272433_100051413	3300031450	Rock	MLRTLMTQAEMHXTTHLDVHQSSDFEDFHEKQTVESMTSQLPKRFIEVQLSDHL
Ga0272433_1001857312	3300031450	Rock	AEMHXTIHSDVHRSSDFEDLHEKQTVESMTSQLSERSIEVQLLDHL
Ga0272433_100352725	3300031450	Rock	MTXAEMHEITHSDIHXSSDFEDLHEKQTVKSMTSQLFKHSIXVQLSDHFSIR
Ga0272425_100186836	3300031453	Rock	MLRTLMTXAEMHXTTYSDVHXSSDFKDLHEKQTVESMTSQLSEHSIEVQLSDHL
Ga0272425_100351916	3300031453	Rock	MLQTLMTQAEMHXTTHSDVHXSSDFEDLHEKQIVESMTSQLSEHSIKVQLSDHL
Ga0272425_100372113	3300031453	Rock	MLXTLMTXAEMHXTIHSDVHQSSDFEDLREKQTVESTTSQLSEHFIKVQLSDHF
Ga0272425_10066589	3300031453	Rock	MLQTLMIXAEMHXTTYSDVHQSSNFENLHEKQTVESTISQLSEHSIEVQLSDHL
Ga0272425_10114551	3300031453	Rock	MHXTTHSDVHXSSDFEDLHEKQTVESTTSQLSEHSIEVQLSDHL
Ga0272425_10148685	3300031453	Rock	MTXAEMYXITHSDIHXSSSSEDLHEKXTAELTSSQLSEHSIKVQFSDHL
Ga0272425_10225245	3300031453	Rock	MTXAEMHXTTYSDVYQSSDFEDLHEKQTVESTTSQLSEHSIKVQLSDHF
Ga0272425_10390462	3300031453	Rock	MLXTLMTQAEMHXTTYSDDHRSSDFKDLHEKQTVESMISQLFEHSIKVQLSDHL
Ga0272425_10539282	3300031453	Rock	MYXITHSDIHQSLSSEDLHEKQTAELMSSQLSEHSIKVQFSDHF
Ga0272425_10581152	3300031453	Rock	MTQAEMYXITHLDIHRSSSSEDLHEKQTAESTSSQLSEHSIKVQFSDHLXIRQNEY
Ga0272425_10604411	3300031453	Rock	MIQAEVYXTTHSDVYXSLDFENFHEKQIVESITSQLSEHSIRVQLSDHF
Ga0272425_11024072	3300031453	Rock	TLMTXAEVHXTTHSDVHRSSNFEDLHEKQTVKSTSSQLSEHSIEVQFSDHL
Ga0272425_11147461	3300031453	Rock	MLQTLMTXAEMHXTTHSDVHXSSDFENLHEKQTVESMTSQLSEHSIEVQLSDHL
Ga0272425_11654451	3300031453	Rock	EMHXTTHSDVLQSSDFEDLHEKQTVESMTSQLSEHSIEVQLSNHL
Ga0272425_11809342	3300031453	Rock	EMHXTTHSDVYQSSDFEDLHEKQTVELMTSQLSEHSIEVQLSNHL
Ga0272430_10524422	3300031460	Rock	MHEITHSDIHXSSDFEDLHEKQTVKSMTSQLFKHSIXVQLSDHFSIR
Ga0272430_11412872	3300031460	Rock	AEMHXTIHSDVHQSSDFEDLHEKQTVESITSQLSEHSIEVQLSDHL
Ga0272430_11511331	3300031460	Rock	HSDIHQSSDFEDFHEKQIVNLISSQLSKHFIKVQLSDHISIR
Ga0272430_11629241	3300031460	Rock	MHXTTHSDVHQXLDFEDLHEKQTVESMTSQLSEHSIKVQLSDH
Ga0272432_100122032	3300031470	Rock	MLQTLTTRAEMHXTTHSDVYRSSDFENLHEKQTVESMTSQLSEHSIEVQLSNHI
Ga0272439_100569316	3300031471	Rock	MFQTLITQAEMHXTIHSDVHQSSDFKDLHEKQTVESITSQLSEHSIKVQLSDHL
Ga0272439_10114758	3300031471	Rock	MTQAEMYXITHSDIHXSLSSEDLHKKQTAESTSSQLSEHSIEVQFSDHLYIRQNEH
Ga0272439_10180864	3300031471	Rock	MTQAEMHXTTYSDDHRSSDFKDLHEKQTVESMISQLFEHSIKVQLSDHL
Ga0272439_10284842	3300031471	Rock	MLRTLMIQAEMHXTTHLNVYXSSDFENLHEKQTVESITSQLSEHSIEVQLSDHL
Ga0272439_10324736	3300031471	Rock	MFQTLMTQAEMHXITHSDVYXSSDFEDLHEKQTAESTSSQLSEHSIK
Ga0272439_10336483	3300031471	Rock	MYXITHLDIHRSSSSEDLHEKQTAESTSSQLSEHSIKVQFSDHLXIRQNEY
Ga0272439_10449873	3300031471	Rock	MLQTLTTQVEMHXTTYSDVHQSSNFENLHEKQTVESMTDQLSEHSIEVQLSDHF
Ga0272439_10724293	3300031471	Rock	MLQTLTTQIKMHXTTHSDVHXSSDFENLHEKQTVKSMTSQLSEHSIKVQL
Ga0272439_10767802	3300031471	Rock	MHXTIHSDVHQSSDFKDLHEKQTVESITSQLSEHSIKVQ
Ga0272439_10828822	3300031471	Rock	MTXAEMYXITHSDIHQSLSSEDLHEKQTAELMSSQLSEHSIKVQFSDHF
Ga0272439_11058151	3300031471	Rock	MTQAEMHXTTHSDVHXSSDFKDLHEKQTVESTTSQLSEH
Ga0272439_11691131	3300031471	Rock	TLTTRAEMHXTTHSDVHQSSDFEDLHEKQTVESMTSQLSEHSVEVQLSDHL
Ga0272439_12435331	3300031471	Rock	LNVHXSSDFEDLHEKQTVELTTSQLSEHSIKVQLSDHL
Ga0272434_1000259119	3300031473	Rock	MHXTTHLNVHXSSDFENLHEKQTVKSTTSQLSEHSIKVQLSDHL
Ga0272434_1000330114	3300031473	Rock	MIRVEMHXTTHSDVHQSLDFEDLHEKQTVESMTSQLSEHSIKVQLSDHL
Ga0272434_100033044	3300031473	Rock	MIQAEMHXTTHSDVHQSSDFENLYEKQTVKSMTSQLSEHSIKVQLLDHF
Ga0272434_1000463107	3300031473	Rock	MLQTLMIXAEMHXTTYLDVHQSSDFEDLHEKQTVKLMTSQLSEHSIEVQLSDHF
Ga0272434_100087568	3300031473	Rock	MFXTLMTXAEMHXTTHSDVHXSSDFENLYEKQTVESMTSQLSEHSIEVQLSNHL
Ga0272434_100116031	3300031473	Rock	MLXTLMTQAEMHXITHSDVHQSLNFKDLHEKQTVELMISQLSEHSIEVQLSDHL
Ga0272434_100121354	3300031473	Rock	MTQAEMYXTTYSDDHRSSDFKDLHEKQTVESMISQLFEHSIKVQLSDHL
Ga0272434_100167532	3300031473	Rock	MLXTLITQAKMHXTTHSNVHQSSDFEDLHEKQTVESMTSQLSKHSIEIQLSDHF
Ga0272434_100222015	3300031473	Rock	MLQTLMTXAEMHXTIHSDIHQLSDFEDFHEKQTVESMTSQLFEHSIKVQLSNYF
Ga0272434_100260111	3300031473	Rock	MHXTTHSNVYXSSDFEDLHEKQTVESMINQLSERSIEVQLSDHL
Ga0272434_10035687	3300031473	Rock	MIQAEMHXTTHSDVHQSSDFEDLHEKQTVESMISQLFEHFIEVQLSDHL
Ga0272434_100358810	3300031473	Rock	MLQTLITXAEMHXTTHSDVHXSSDFEDLHEKQTVESITSQLSEHFIEVQLSDHL
Ga0272434_100472023	3300031473	Rock	MLQTLTIQAEMHXTTHSDVHQSSNFEDFHEKQTVELTTSQLSEHSIEV
Ga0272434_10053435	3300031473	Rock	MTXAEMHXTTYSDVHQSSDFKDLHEKQTVESTTSQLSKHFIEVQLSDHL
Ga0272424_100202527	3300032162	Rock	MLQTLMTQAKMHXTTHSDVHXSLDFKNLHEKQIVESMTSQLSEHSIKVQLSDHL
Ga0272424_100730217	3300032162	Rock	MTQAEMHXTIHSDVHQSSDFEDLHEKQTVELTTSQLFERSIEVQLSDHL
Ga0272424_10093138	3300032162	Rock	MIQIEMHXTTYLNVHXSSDFEDLHEKQTVELTTSQLSEHSIKVQLSDHL
Ga0272424_10212417	3300032162	Rock	MLXTLMTQAEMHXITHSDVHQSSNFKDLHEKQTVELMISQLSEHSIEVQLSDHL
Ga0272424_10441491	3300032162	Rock	TXAEMYXITHSDIHXSSSSEDLHEKQTAESMSSQLSEHSIKVQFSDHL
Ga0272424_10584712	3300032162	Rock	MTXAEMHXTTHSDVHXSLDFEDLHEKQTVKLMTSQLSEHSIKVQLSDHL
Ga0272424_10627901	3300032162	Rock	MHXTTHSDVHXSSNFEDFHEKQTVELMTSQLSEHFIKVQLSDHL
Ga0272424_11380731	3300032162	Rock	MLQTLTTRIKMHXTTHSDVHXSSDFENLHEKQTVKSMTSQLSEHSIKVQL
Ga0272423_10050609	3300033168	Rock	MHXTTHSDVHRSSVFEDLHEKQTVELTTSQLSEHSIEVQLSDHL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences