NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080653

Metagenome / Metatranscriptome Family F080653

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080653
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 47 residues
Representative Sequence VKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQ
Number of Associated Samples 99
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.39 %
% of genes near scaffold ends (potentially truncated) 99.13 %
% of genes from short scaffolds (< 2000 bps) 90.43 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(30.435 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.217 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.77%    β-sheet: 0.00%    Coil/Unstructured: 66.23%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF06348DUF1059 62.61
PF00486Trans_reg_C 20.87
PF03704BTAD 6.96
PF01434Peptidase_M41 3.48
PF03795YCII 0.87
PF04545Sigma70_r4 0.87
PF13193AMP-binding_C 0.87
PF06480FtsH_ext 0.87
PF01547SBP_bac_1 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 6.96
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 6.96
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 4.35
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.87

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001334|A2165W6_1020006All Organisms → cellular organisms → Bacteria → Terrabacteria group1111Open in IMG/M
3300001406|JGI20187J14854_1007539All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300001536|A1565W1_10328414All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300001593|JGI12635J15846_10050214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3186Open in IMG/M
3300001593|JGI12635J15846_10636285All Organisms → cellular organisms → Bacteria → Terrabacteria group618Open in IMG/M
3300002245|JGIcombinedJ26739_100449083All Organisms → cellular organisms → Bacteria → Terrabacteria group1167Open in IMG/M
3300002907|JGI25613J43889_10178194All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300002914|JGI25617J43924_10361125All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005166|Ga0066674_10297076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales759Open in IMG/M
3300005167|Ga0066672_10416549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria879Open in IMG/M
3300005176|Ga0066679_10938158All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005178|Ga0066688_10351203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria955Open in IMG/M
3300005179|Ga0066684_10114000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1674Open in IMG/M
3300005179|Ga0066684_10839175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria604Open in IMG/M
3300005471|Ga0070698_100243754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1730Open in IMG/M
3300005518|Ga0070699_100381993All Organisms → cellular organisms → Bacteria1272Open in IMG/M
3300005518|Ga0070699_100537437All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300005518|Ga0070699_101234883All Organisms → cellular organisms → Bacteria → Terrabacteria group685Open in IMG/M
3300005518|Ga0070699_101747310All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005536|Ga0070697_100460418All Organisms → cellular organisms → Bacteria → Terrabacteria group1109Open in IMG/M
3300005536|Ga0070697_101399281All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300005542|Ga0070732_10364594All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300005561|Ga0066699_11189917All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005569|Ga0066705_10327671All Organisms → cellular organisms → Bacteria → Terrabacteria group969Open in IMG/M
3300005586|Ga0066691_10323873All Organisms → cellular organisms → Bacteria → Terrabacteria group911Open in IMG/M
3300005587|Ga0066654_10637499All Organisms → cellular organisms → Bacteria → Terrabacteria group592Open in IMG/M
3300005598|Ga0066706_10001911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8568Open in IMG/M
3300005938|Ga0066795_10267895All Organisms → cellular organisms → Bacteria → Terrabacteria group505Open in IMG/M
3300006032|Ga0066696_10155191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1430Open in IMG/M
3300006047|Ga0075024_100824497All Organisms → cellular organisms → Bacteria → Terrabacteria group521Open in IMG/M
3300006059|Ga0075017_100878421All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300006864|Ga0066797_1005049All Organisms → cellular organisms → Bacteria4309Open in IMG/M
3300006864|Ga0066797_1137666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria854Open in IMG/M
3300009029|Ga0066793_10202109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_121157Open in IMG/M
3300009029|Ga0066793_10812529All Organisms → cellular organisms → Bacteria → Terrabacteria group531Open in IMG/M
3300009038|Ga0099829_10366369All Organisms → cellular organisms → Bacteria → Terrabacteria group1188Open in IMG/M
3300009038|Ga0099829_11534397All Organisms → cellular organisms → Bacteria → Terrabacteria group550Open in IMG/M
3300009038|Ga0099829_11760555All Organisms → cellular organisms → Bacteria → Terrabacteria group508Open in IMG/M
3300009088|Ga0099830_10886100All Organisms → cellular organisms → Bacteria → Terrabacteria group738Open in IMG/M
3300010303|Ga0134082_10021067All Organisms → cellular organisms → Bacteria → Terrabacteria group2405Open in IMG/M
3300010329|Ga0134111_10528468All Organisms → cellular organisms → Bacteria → Terrabacteria group521Open in IMG/M
3300010335|Ga0134063_10482373All Organisms → cellular organisms → Bacteria → Terrabacteria group618Open in IMG/M
3300010396|Ga0134126_11620283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12712Open in IMG/M
3300011269|Ga0137392_10749655All Organisms → cellular organisms → Bacteria → Terrabacteria group807Open in IMG/M
3300011270|Ga0137391_11236009All Organisms → cellular organisms → Bacteria → Terrabacteria group594Open in IMG/M
3300012011|Ga0120152_1007228All Organisms → cellular organisms → Bacteria5067Open in IMG/M
3300012096|Ga0137389_10935526All Organisms → cellular organisms → Bacteria → Terrabacteria group743Open in IMG/M
3300012096|Ga0137389_11377234All Organisms → cellular organisms → Bacteria → Terrabacteria group600Open in IMG/M
3300012189|Ga0137388_10063693All Organisms → cellular organisms → Bacteria → Terrabacteria group3043Open in IMG/M
3300012200|Ga0137382_10671625All Organisms → cellular organisms → Bacteria → Terrabacteria group742Open in IMG/M
3300012206|Ga0137380_10652600All Organisms → cellular organisms → Bacteria → Terrabacteria group916Open in IMG/M
3300012208|Ga0137376_11177533All Organisms → cellular organisms → Bacteria → Terrabacteria group655Open in IMG/M
3300012210|Ga0137378_10881408All Organisms → cellular organisms → Bacteria → Terrabacteria group808Open in IMG/M
3300012362|Ga0137361_10531064All Organisms → cellular organisms → Bacteria → Terrabacteria group1080Open in IMG/M
3300012362|Ga0137361_10806587All Organisms → cellular organisms → Bacteria → Terrabacteria group854Open in IMG/M
3300012363|Ga0137390_10460324All Organisms → cellular organisms → Bacteria → Terrabacteria group1247Open in IMG/M
3300012685|Ga0137397_10718336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria742Open in IMG/M
3300012917|Ga0137395_10803617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12681Open in IMG/M
3300012927|Ga0137416_10905614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria784Open in IMG/M
3300012957|Ga0164303_11071779All Organisms → cellular organisms → Bacteria → Terrabacteria group579Open in IMG/M
3300012961|Ga0164302_10858987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12692Open in IMG/M
3300013503|Ga0120127_10000679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6242Open in IMG/M
3300013766|Ga0120181_1023583All Organisms → cellular organisms → Bacteria → Terrabacteria group1538Open in IMG/M
3300014052|Ga0120109_1059791All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300014829|Ga0120104_1066120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12696Open in IMG/M
3300015190|Ga0167651_1066832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12732Open in IMG/M
3300015193|Ga0167668_1034395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_121107Open in IMG/M
3300015359|Ga0134085_10605535All Organisms → cellular organisms → Bacteria → Terrabacteria group509Open in IMG/M
3300018054|Ga0184621_10085282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1103Open in IMG/M
3300018433|Ga0066667_11107005All Organisms → cellular organisms → Bacteria → Terrabacteria group686Open in IMG/M
3300018468|Ga0066662_12213415All Organisms → cellular organisms → Bacteria → Terrabacteria group577Open in IMG/M
3300020581|Ga0210399_10174490All Organisms → cellular organisms → Bacteria → Terrabacteria group1783Open in IMG/M
3300021178|Ga0210408_11001823All Organisms → cellular organisms → Bacteria → Terrabacteria group646Open in IMG/M
3300021403|Ga0210397_11018292All Organisms → cellular organisms → Bacteria → Terrabacteria group643Open in IMG/M
3300021418|Ga0193695_1087752All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300021559|Ga0210409_10463388All Organisms → cellular organisms → Bacteria → Terrabacteria group1129Open in IMG/M
3300025505|Ga0207929_1090566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria574Open in IMG/M
3300025509|Ga0208848_1090252All Organisms → cellular organisms → Bacteria → Terrabacteria group624Open in IMG/M
3300025862|Ga0209483_1011081All Organisms → cellular organisms → Bacteria5010Open in IMG/M
3300025862|Ga0209483_1119483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1130Open in IMG/M
3300025910|Ga0207684_10634039All Organisms → cellular organisms → Bacteria → Terrabacteria group911Open in IMG/M
3300026298|Ga0209236_1209014All Organisms → cellular organisms → Bacteria → Terrabacteria group714Open in IMG/M
3300026313|Ga0209761_1228649All Organisms → cellular organisms → Bacteria → Terrabacteria group766Open in IMG/M
3300026313|Ga0209761_1272389All Organisms → cellular organisms → Bacteria → Terrabacteria group617Open in IMG/M
3300026317|Ga0209154_1144308All Organisms → cellular organisms → Bacteria → Terrabacteria group993Open in IMG/M
3300026323|Ga0209472_1271356All Organisms → cellular organisms → Bacteria → Terrabacteria group541Open in IMG/M
3300026324|Ga0209470_1292613All Organisms → cellular organisms → Bacteria → Terrabacteria group610Open in IMG/M
3300026325|Ga0209152_10304265All Organisms → cellular organisms → Bacteria → Terrabacteria group598Open in IMG/M
3300026329|Ga0209375_1022344All Organisms → cellular organisms → Bacteria3598Open in IMG/M
3300026331|Ga0209267_1250479All Organisms → cellular organisms → Bacteria → Terrabacteria group616Open in IMG/M
3300026342|Ga0209057_1007035All Organisms → cellular organisms → Bacteria7469Open in IMG/M
3300026499|Ga0257181_1068099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium608Open in IMG/M
3300026538|Ga0209056_10507709All Organisms → cellular organisms → Bacteria → Terrabacteria group629Open in IMG/M
3300026542|Ga0209805_1279348All Organisms → cellular organisms → Bacteria → Terrabacteria group638Open in IMG/M
3300026551|Ga0209648_10418375All Organisms → cellular organisms → Bacteria → Terrabacteria group862Open in IMG/M
3300026552|Ga0209577_10183408All Organisms → cellular organisms → Bacteria → Terrabacteria group1621Open in IMG/M
3300027480|Ga0208993_1106397All Organisms → cellular organisms → Bacteria → Terrabacteria group513Open in IMG/M
3300027537|Ga0209419_1063935All Organisms → cellular organisms → Bacteria → Terrabacteria group721Open in IMG/M
3300027587|Ga0209220_1084865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12835Open in IMG/M
3300027610|Ga0209528_1121410All Organisms → cellular organisms → Bacteria → Terrabacteria group576Open in IMG/M
3300027674|Ga0209118_1040092All Organisms → cellular organisms → Bacteria → Terrabacteria group1410Open in IMG/M
3300027681|Ga0208991_1112186All Organisms → cellular organisms → Bacteria → Terrabacteria group815Open in IMG/M
3300027684|Ga0209626_1023458All Organisms → cellular organisms → Bacteria → Terrabacteria group1483Open in IMG/M
3300027748|Ga0209689_1427059All Organisms → cellular organisms → Bacteria → Terrabacteria group508Open in IMG/M
3300027915|Ga0209069_10150097All Organisms → cellular organisms → Bacteria → Terrabacteria group1159Open in IMG/M
3300027915|Ga0209069_11053325All Organisms → cellular organisms → Bacteria → Terrabacteria group502Open in IMG/M
3300028047|Ga0209526_10372309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_66_12953Open in IMG/M
3300028536|Ga0137415_10752149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria786Open in IMG/M
3300028792|Ga0307504_10123654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria851Open in IMG/M
3300028881|Ga0307277_10578488All Organisms → cellular organisms → Bacteria → Terrabacteria group504Open in IMG/M
3300029636|Ga0222749_10468134All Organisms → cellular organisms → Bacteria → Terrabacteria group677Open in IMG/M
3300031820|Ga0307473_11090681All Organisms → cellular organisms → Bacteria → Terrabacteria group588Open in IMG/M
3300031962|Ga0307479_11667378All Organisms → cellular organisms → Bacteria → Terrabacteria group592Open in IMG/M
3300032180|Ga0307471_100144991All Organisms → cellular organisms → Bacteria → Terrabacteria group2271Open in IMG/M
3300032180|Ga0307471_100544568All Organisms → cellular organisms → Bacteria → Terrabacteria group1314Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.39%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.96%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost6.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.35%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil4.35%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.61%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.74%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001334Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001406Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012EnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300015190Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025505Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025509Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027610Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2165W6_102000613300001334PermafrostVKYLYLLYADESKMPAPGTPAFNAQNDAFNNYFEEINSK
JGI20187J14854_100753913300001406Arctic Peat SoilVKYLYLLYGDESKMPAPGSAQFDAQNEAFNTYFAELDGKGMFKAG
A1565W1_1032841423300001536PermafrostMKYLYLLYADESKMPAPDSAQMQQQEAAFGRYYEELS
JGI12635J15846_1005021443300001593Forest SoilMKYLYLLYADESKMPAADSPQMQQQEAAFGKYYEELS
JGI12635J15846_1063628533300001593Forest SoilMKYLYLLYADESKMPAPDSPQMQQQQAAFGRYYEELSGKGMF
JGIcombinedJ26739_10044908313300002245Forest SoilVKYLYLLYADESKMPAPGTPAFNAQNDAFNNYFAEIDGKGMF
JGI25613J43889_1017819433300002907Grasslands SoilVKYLYLLYADESKMPAPGSAAFNAQNDAFNNYFAEIDGKGMFKAGDPVQPSKTSKT
JGI25617J43924_1036112523300002914Grasslands SoilMKYLYLLYADESKMPAPDSAQMQQQQAAFGAYYDELSKRGMFKAGDPVQPS
Ga0066674_1029707633300005166SoilVKYLYLLYADESKMAAPGSAQFDAQNDAFNKYFEELDGKGMFKA
Ga0066672_1041654913300005167SoilMKYLYLLYADESKMPAPNSPQMQQQEAAFGRYYEELSGKGMFKGGDPVQ
Ga0066679_1093815813300005176SoilLKYLYLLYADESKMPAADSPQMQQQQAAFGRYYEELSGKGMFKAGDPVQPSKTAT
Ga0066688_1035120313300005178SoilMKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEELSGRG
Ga0066684_1011400043300005179SoilMKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGRGMFKGGDPVQPSKT
Ga0066684_1083917533300005179SoilLKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEEVSGRGMFK
Ga0070698_10024375413300005471Corn, Switchgrass And Miscanthus RhizosphereMKYLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGKGMFKAGDPVQP
Ga0070699_10038199333300005518Corn, Switchgrass And Miscanthus RhizosphereVKYLYLLYADESKMPAPGSPQMQQQQAAFGRYYEELSGKGMFKAGDPVQP
Ga0070699_10053743733300005518Corn, Switchgrass And Miscanthus RhizosphereVKYLYLLYADESKMPAPGTPAFDAQNNAFNDYFAEIDGKGMFKAGDPVQP
Ga0070699_10123488313300005518Corn, Switchgrass And Miscanthus RhizosphereMKFLYLLYADESKMPAPESVQMQQQEAAFGKYYEELSGKGMFKAGDPVQ
Ga0070699_10174731013300005518Corn, Switchgrass And Miscanthus RhizosphereVKFLYLLYADESKMPAPGSAQFDAQNDAFNKYFELIDGKGMFKAGDPVQGS
Ga0070697_10046041813300005536Corn, Switchgrass And Miscanthus RhizosphereVKYLYLLYADESKMPHPGTPAFDAQNNAFNDYFAEIDGKGMFK
Ga0070697_10139928133300005536Corn, Switchgrass And Miscanthus RhizosphereLKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPV
Ga0070732_1036459433300005542Surface SoilVKYLYLLYADESKMPAPGSAAFNAQNDAFNNYFAEIDGKGMFKAGDPVQPSKTSQTVR
Ga0066699_1118991713300005561SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGKYYEEISGRGMFKAGDPVQPSKT
Ga0066705_1032767133300005569SoilVKYLYLLYADESKMPQVGTPAFDAQNNAFNDYFAE
Ga0066691_1032387313300005586SoilVKYLYLLYADESKMPAPGSAQFDAQNAAFNKYFEEI
Ga0066654_1063749933300005587SoilMKYLYLLYADESKMPAPDSPQMAQQEAAFGRFYDEISQKGLFKAGDP
Ga0066706_1000191113300005598SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEEVSGRGMF
Ga0066795_1026789513300005938SoilVKYLYLLYGDETKMPAPGSAQFDAQNDAFNKYFEDIDGKGMFKAGDPV
Ga0066696_1015519113300006032SoilMKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGRGMFKGGDPVQPSKTATT
Ga0075024_10082449733300006047WatershedsVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEELDG
Ga0075017_10087842113300006059WatershedsVKYLYLLYADESKMPAPGSPTFNAQNDAYNTYYGVLDGKGMFKAGDPVHASK
Ga0066797_100504963300006864SoilVKYLYLLYADESKMPAPGSAAFTAQNDAFNNYFAEIDGKGMFKAGDPVQPSKTSKTV
Ga0066797_113766613300006864SoilVKYLYLLYVDESKMPAPGTPAFNAQNDAFNTYFAEIDGK
Ga0066793_1020210933300009029Prmafrost SoilVKYLYLLYADESKMPAPGSAQFDAQNEAFNTYFAEIDGKGMFKAGDPVQGS
Ga0066793_1081252933300009029Prmafrost SoilVKYLYLLYADESKMPAPGSAAFTAQNDAFNNYFAEIDGKGMFKAGDPVQPSKTSK
Ga0099829_1036636943300009038Vadose Zone SoilMQTKESNVKYLYLLYADESKMPAPGSAQFNAQNDAFNNYFAELDGKGMFK
Ga0099829_1153439713300009038Vadose Zone SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEINGKGMFKAGDPVQASKTSKTVRVR
Ga0099829_1176055513300009038Vadose Zone SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEINGKGMFKAGDPV
Ga0099830_1088610013300009088Vadose Zone SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEINGKGMFKAGDPVQASKTSKTVR
Ga0134082_1002106713300010303Grasslands SoilMKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGRGMFKGGDPVQP
Ga0134111_1052846813300010329Grasslands SoilMAKYLYLLYADESKMPSPDSPQMQQQEAAFGRYYEELSGRGMFK
Ga0134063_1048237313300010335Grasslands SoilMKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGR
Ga0134126_1162028313300010396Terrestrial SoilVKYLYLLYADESKMPHPGTPAFDAQNDAFNKYFAEIDGKGMFKAGDPVQASSTSRT
Ga0137392_1074965533300011269Vadose Zone SoilMKYLYLLYADESKMPAPGSAQFNAQNDAFNNYFAELDGKG
Ga0137391_1123600933300011270Vadose Zone SoilVKYLYLLYADESKMPAPGTPAFNAQNDAFNNYFEEINS
Ga0120152_100722813300012011PermafrostVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFAEIDGKGMFK
Ga0137389_1093552613300012096Vadose Zone SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEINGKGMFKAGDPVQAS
Ga0137389_1137723433300012096Vadose Zone SoilMKYLYLLYADESKMPAPGSPQMQQQQAAFGRYYEELSGKGMFKAGDPVQP
Ga0137388_1006369343300012189Vadose Zone SoilMKYLYLLYADESKMPAPGSPQMQQQQAAFGRYYEELSGKGMFKAGDPV
Ga0137382_1067162513300012200Vadose Zone SoilMKYLYLLYADESKMPAPNSPQMQQQEAAFGRYYEELSGKGMFKG
Ga0137380_1065260013300012206Vadose Zone SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEINGKGMFKAGDPVQ
Ga0137376_1117753333300012208Vadose Zone SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQPSKTSKTVRVR
Ga0137378_1088140833300012210Vadose Zone SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEING
Ga0137361_1053106443300012362Vadose Zone SoilVKYLYLLYADESKMPAPGTPAFNAQNDAFNNYFAEIDGKGMFKAGDPVQASKTSKT
Ga0137361_1080658733300012362Vadose Zone SoilMKFLYLLYADESKMPAPGSPQMDQQQAAFGRYYEELSGKGMFKAG
Ga0137390_1046032443300012363Vadose Zone SoilMQTKESNVKYLYLLYADESKMPAPGSAQFNAQNDAFNNYFAELDGKGMFKAGDPVQPSKTSKTVRV
Ga0137397_1071833613300012685Vadose Zone SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQPSKTSKTV
Ga0137395_1080361713300012917Vadose Zone SoilVKYLYLLYADESKMPSPGSAQFDAQNDAFNKYFEEIDGKGM
Ga0137416_1090561433300012927Vadose Zone SoilMVALQKGVSVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEVIDGKGMFKAGDPVQPS
Ga0164303_1107177933300012957SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQ
Ga0164302_1085898733300012961SoilVKFLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKA
Ga0120127_1000067973300013503PermafrostLRKGVIVKYLYLLYADESKMPAPGSAQFDAQNAAYNKYFEEIDGKGMFKAGDPVQGSKAS
Ga0120181_102358343300013766PermafrostVKYLYLLYADESKMPAPGSPAFNAQNDAFNNYFEEINS
Ga0120109_105979113300014052PermafrostVKYLYLLYADESKMPAPGSAQFDAQNNAFNKYFEEIDGKGMFK
Ga0120104_106612033300014829PermafrostVKYLYLLYADESKMAAPGSAQFEAQNDAFNKYFAEIDGKGMFK
Ga0167651_106683233300015190Glacier Forefield SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQGSKTSKTVRVR
Ga0167668_103439533300015193Glacier Forefield SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFAEIDGRGMFKAGDPVQ
Ga0134085_1060553523300015359Grasslands SoilLKYLYLLYADESKMPAPHSPQMQQQEAAFGRYYEEVSGR
Ga0184621_1008528213300018054Groundwater SedimentVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQP
Ga0066667_1110700533300018433Grasslands SoilMKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGRGM
Ga0066662_1221341513300018468Grasslands SoilMKYLYLLYADESKMPAPESPQMQQQQAAFGKYYEELTAKGMFKAGDPVQPSKT
Ga0210399_1017449013300020581SoilVKYLYLLYADESKMPHPGAPGFDAQNEAFNKYFEELDGKGMFKAGDPVQGSKTSKTV
Ga0210408_1100182333300021178SoilVKYLYLLYADESKMPAPGSAAFNAQNDAFNNYFAELDGKGMFKAGDPVQP
Ga0210397_1101829213300021403SoilVKYLYLLYADESKMPAPGSAQFNAQNDAFNNYFAELDGK
Ga0193695_108775233300021418SoilVKYLYLLYADESKMPAPGSPQFDKQNDAFNSYFAEIDGKGMFKAGDPVQPSSTS
Ga0210409_1046338833300021559SoilMKYLYLLYADESKMPAADSPQMEQQQAAFGKYYEELSGKGMFK
Ga0207929_109056633300025505Arctic Peat SoilVKYLYLLYADESKMAAPGSAQYDAQNEAFNKYFAEIDGKGMF
Ga0208848_109025233300025509Arctic Peat SoilVKYLYLLYADESKMPAPGSAQFDAQNAGYNKYFEEIDGKGMFKAGDPVQGSKTSKTV
Ga0209483_101108173300025862Arctic Peat SoilVKYLYLLYADESKMAAPGSAQYDAQNEAFNKYFAEIDGKGMFKAGDPVQGSKTSKTV
Ga0209483_111948333300025862Arctic Peat SoilVKYLYLLYADESKMPAPGSAQFDAQNEAFNTYFAEIDGKGMFKAGDPV
Ga0207684_1063403933300025910Corn, Switchgrass And Miscanthus RhizosphereMKYLYLLYADESKMPAPDSPQMQQQEAAFGKYYEELS
Ga0209236_120901413300026298Grasslands SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYDEVSGRGMFKGGDPVQ
Ga0209761_122864933300026313Grasslands SoilMKFLYLLYADESKLPAADSPQMEQQQAAFGRYYEELSGRGMFKGGDPVQPSKTATT
Ga0209761_127238913300026313Grasslands SoilMPKYLYLLYADESKMPSPDSPQMAQQEAAFGRYYEELSGRGMFKAGDP
Ga0209154_114430833300026317SoilMAKYLYLLYADESKMPAADSPQMQQQEAAFGRYYEELAGRGMFKAGDPVQ
Ga0209472_127135613300026323SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEEVSGRGMFKGGDPVQPS
Ga0209470_129261333300026324SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEEVS
Ga0209152_1030426513300026325SoilMKYLYLLYADESKMPAPGSPQMDQQQAAFGRYYEELSGKGMFKDGDPVQPSK
Ga0209375_102234413300026329SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYE
Ga0209267_125047933300026331SoilMKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSG
Ga0209057_100703593300026342SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEAVSGRGMFKGGDPVQPSRTATT
Ga0257181_106809913300026499SoilVKYLYLLYADESKMPHPGTPAFDAQNTAFNNYFEEI
Ga0209056_1050770913300026538SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGKYYEEISGRGMFKA
Ga0209805_127934833300026542SoilVKFLYLLYADESKMPAADSPQMEQQQAAFGRYYEELSGRGMFKGGDPVQP
Ga0209648_1041837513300026551Grasslands SoilMKYLYLLYADESKMPAPDSPQMQQQQAAFGRYYEE
Ga0209577_1018340843300026552SoilMKFLYLLYADESKMPAPDSAQMQQQQAAFGRYYEELSGRGMFKAGDPVQPS
Ga0208993_110639713300027480Forest SoilVKYLYLLYADESKMPAPGSPTFDAQNNAFNNYFAELDGKG
Ga0209419_106393533300027537Forest SoilMKYLYLLYADESKMPAPDSAQMQQQEAAFGRYYEEISG
Ga0209220_108486533300027587Forest SoilVKYLYLLYADESKMPAPGSEAFNAQNDAFNNYFAEIDGKGMFKAGDPVQPSKTSK
Ga0209528_112141033300027610Forest SoilMKYLYLLYADESKMPAPDSAQMQQQEAAFGRYYEEIS
Ga0209118_104009243300027674Forest SoilMKYLYLLYADESKMPAPDSAQMQQQQAAFGAYYDE
Ga0208991_111218633300027681Forest SoilMKYLYLLYADESKMPAPNSPQMQQQEAAFGRYYEELSGKGMFKGGDPV
Ga0209626_102345813300027684Forest SoilMKYLYLLYADESKLPAPDSPQMQQQQAAFGRYYEELSGKGM
Ga0209689_142705933300027748SoilMAKYLYLLYADESKMPAPDSPQMQQQEAAFGRYYEEVSGRG
Ga0209069_1015009743300027915WatershedsVKYLYLLYADESKMPAPGTPAFNAQNDAFNAYFEEINSKGLFKAGDPVQASKTSKTV
Ga0209069_1105332513300027915WatershedsVKYLYLLYADESKMPAPGSPTFNAQNDAYNEYYGVLDGKGMFKAGDPV
Ga0209526_1037230913300028047Forest SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFAELDGKGMFKAGDPVQ
Ga0137415_1075214913300028536Vadose Zone SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQPSK
Ga0307504_1012365413300028792SoilVKYLYLLYADESKMPAPGTPAFDAQNNAFNDYFAEIDGKGMFKAGDPVQASKTSKTV
Ga0307277_1057848813300028881SoilVKYLYLLYADESKMPAPGSAQFDAQNDAFNKYFEEIDGKGMFKAGDPVQASK
Ga0222749_1046813433300029636SoilVKYLYLLYADESKMPAPGSAAFNAQNDAFNNYFAELDGKGMFK
Ga0307473_1109068113300031820Hardwood Forest SoilMAKYLYLLYADESKMPAPDSAQMEQQEAAFGRYYEELSGRGMFKAGDPVQPS
Ga0307479_1166737813300031962Hardwood Forest SoilVKYLYLLYADESKMPAPGSPAFDAQNDAFNKYFETLDGKGMFK
Ga0307471_10014499113300032180Hardwood Forest SoilMKYLYLLYADESKMPAPDSAQMQQQQAAFGRYYEELSGKGMFKA
Ga0307471_10054456813300032180Hardwood Forest SoilMKFLYLLYADESKMPAPGSPQMDQQEAAFGRYYEEISGKGMFK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.