Metagenome / Metatranscriptome Family F080649

Basic Information
Family ID	F080649
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	50 residues
Representative Sequence	MIKKLIEKFFGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCPKCQQTIKGE
Number of Associated Samples	78
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.74 %
% of genes from short scaffolds (< 2000 bps)	6.96 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.130 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (51.304 % of family members)
Environment Ontology (ENVO)	Unclassified (64.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (78.261 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.83% β-sheet: 0.00% Coil/Unstructured: 47.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00166	Cpn10	13.91
PF03237	Terminase_6N	2.61

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	13.91

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
All Organisms	root	All Organisms	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.13 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.87 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10018287	Not Available	3460	Open in IMG/M
3300005512\|Ga0074648_1137429	Not Available	768	Open in IMG/M
3300006027\|Ga0075462_10035802	Not Available	1592	Open in IMG/M
3300006637\|Ga0075461_10172076	Not Available	656	Open in IMG/M
3300010316\|Ga0136655_1209467	Not Available	580	Open in IMG/M
3300022176\|Ga0212031_1018139	Not Available	1075	Open in IMG/M
3300025543\|Ga0208303_1056948	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	929	Open in IMG/M
3300025646\|Ga0208161_1103890	Not Available	778	Open in IMG/M
3300025655\|Ga0208795_1068606	Not Available	1004	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.52%
Terrestrial	Environmental → Terrestrial	3.48%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	84.35%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	7.83%
Soil	Environmental → Terrestrial → Soil	3.48%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Sediment	Environmental → Aquatic → Sediment	0.87%
Unclassified	Environmental → Aquatic → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	65.22%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.09%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	6.09%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.22%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.35%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.48%
Clay	Environmental → Terrestrial → Soil → Clay	3.48%
River	Environmental → Aquatic → Freshwater → River	1.74%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	65.22%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.09%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	4.35%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.48%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.48%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	2.61%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.74%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	1.74%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	51.30%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	12.17%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	6.09%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	3.48%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.48%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.48%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.48%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	2.61%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.74%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.74%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.74%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	1.74%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.87%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.87%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.87%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	0.87%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.87%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001934	Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006401	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009469	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300012522	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012967	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019732	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_0-1_MG	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100182874	3300000116	Marine	MIKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK*
DelMOSpr2010_100410043	3300000116	Marine	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK*
DelMOWin2010_1001869010	3300000117	Marine	MIKKLIEKFYGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK*
DelMOWin2010_101077902	3300000117	Marine	MIKRLFKIFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
JGI11705J14877_100172717	3300001419	Saline Water And Sediment	MIKKLIEKXYGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCEKCKEAINVK*
JGI11705J14877_100762062	3300001419	Saline Water And Sediment	MIKKLFKIFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
GOS2267_1014964	3300001934	Marine	MFKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCLKCQQTIKGE*
GOS2229_10377606	3300001963	Marine	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQQTIKGE*
Ga0074648_10760743	3300005512	Saline Water And Sediment	MIKKLIEKFYGKFCRCLETPIAPENSFAAKGFCDEHPKFKHRCEKCKEAINVK*
Ga0074648_11374294	3300005512	Saline Water And Sediment	MIKKLFKKFFDKFCGRLETPIAPDDAFVSKGHCDDHPNVKHICS
Ga0074648_11649342	3300005512	Saline Water And Sediment	MIKKLFKIFFDKFCRRLETPIAPDDAFVSKGYCDNHPKFKHRCSECQDSLNG*
Ga0074647_10166994	3300005611	Saline Water And Sediment	MLKKLFEKIFGKFCRCLETPKAFDVAFVPKGFCDEHPKFKHRCPKCQQTIKGE*
Ga0075474_101019642	3300006025	Aqueous	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHKCDKCQEAING*
Ga0075474_101699472	3300006025	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCQKCQETIKGE*
Ga0075478_101289323	3300006026	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQQTIKGE*
Ga0075462_100358026	3300006027	Aqueous	MIKKLFKKFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
Ga0075506_18140353	3300006401	Aqueous	MIKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCEKCKEAINVK*
Ga0075461_101720761	3300006637	Aqueous	ETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
Ga0075476_102043452	3300006867	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGE*
Ga0075477_103062652	3300006869	Aqueous	MFKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCQKCQETIKGE*
Ga0075475_102271133	3300006874	Aqueous	MIKRLFKIFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0070747_12649252	3300007276	Aqueous	MSNRRYNKQTRKMIKKLFKKFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
Ga0099851_13636582	3300007538	Aqueous	FFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0099849_11989003	3300007539	Aqueous	LETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0099849_12060612	3300007539	Aqueous	MIKKLFKNFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0099847_10268361	3300007540	Aqueous	RRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0099847_11728761	3300007540	Aqueous	NFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0099847_12145143	3300007540	Aqueous	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQE
Ga0099850_13087193	3300007960	Aqueous	MIKKLIEKFYGKFCRCLETPIAPENSFAAKGFCDEHPKFKHRCEKCKEAI
Ga0102963_13819392	3300009001	Pond Water	MIKKLFKNFFDKFCRSLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
Ga0114918_103386511	3300009149	Deep Subsurface	MIKKLIEKFFGKFCRCLETPKAFDVASVPKVFCDEHPKFKHRCPKCQQTIKGE*
Ga0114918_107500282	3300009149	Deep Subsurface	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGK*
Ga0127401_11285132	3300009469	Meromictic Pond	MFKKLIERFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK*
Ga0114919_106589783	3300009529	Deep Subsurface	MIKKLIEKFFGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCPKCQQTIKGE*
Ga0129348_11457783	3300010296	Freshwater To Marine Saline Gradient	MIKKLIEKFYGKFCKCLETPKAFDVAFVPKGFCDEHPKFKHRCEKCKEEINVK*
Ga0129348_11591674	3300010296	Freshwater To Marine Saline Gradient	MIKKLFKKFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCS
Ga0129348_12571143	3300010296	Freshwater To Marine Saline Gradient	RLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0129345_13131011	3300010297	Freshwater To Marine Saline Gradient	KFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0129351_11967443	3300010300	Freshwater To Marine Saline Gradient	LFKKFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0129351_13988831	3300010300	Freshwater To Marine Saline Gradient	RLETPIAPDDAFVSKGHCDDHAKFKHRCSKCQESLKG*
Ga0136655_10039939	3300010316	Freshwater To Marine Saline Gradient	MIKKLFKNFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
Ga0136655_12094673	3300010316	Freshwater To Marine Saline Gradient	MFKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCPKCQQTIKGE*
Ga0129333_108803362	3300010354	Freshwater To Marine Saline Gradient	MLKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCPKCQETIKGE*
Ga0129333_115596633	3300010354	Freshwater To Marine Saline Gradient	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCQKCQQTIKGE*
Ga0129324_100679291	3300010368	Freshwater To Marine Saline Gradient	KFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0129324_102784493	3300010368	Freshwater To Marine Saline Gradient	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGE*
Ga0129324_104384642	3300010368	Freshwater To Marine Saline Gradient	MIKKLFKKFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG*
Ga0136549_104707323	3300010389	Marine Methane Seep Sediment	LETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG*
Ga0129326_14281222	3300012522	Aqueous	MIKKLIEKFYGKFCRCLKTPIAPENTFAAKGFCDEHSKFKHRCPKCQQTIKGE*
Ga0129352_101803852	3300012528	Aqueous	MLKKLIEKFYGKFCRCLETPIAPENTFAAKGFCDEHSKFKHRCPKCQQTIKGE*
Ga0129343_11134232	3300012967	Aqueous	MFKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCLKCQQTIKGE*
Ga0129343_14613492	3300012967	Aqueous	MIKKLIEKFYGKFCRCLETPIAPQNAFAAKGFCDEHPKFKHRCEKCKEAIN
Ga0180120_101658001	3300017697	Freshwater To Marine Saline Gradient	MIKKLIEKFYGKFCRCLETPIAPENTFAAKGFCDEHSKFKHRCPKCQQTIKGE
Ga0181583_100393748	3300017952	Salt Marsh	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK
Ga0181580_100644673	3300017956	Salt Marsh	MFKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQEAIKEE
Ga0180433_104077793	3300018080	Hypersaline Lake Sediment	MIKKLIEKFYGKFCRCLETPIAPQNAFAAKGFCDEHPKFKHRCEKCKEAINVK
Ga0180433_106168082	3300018080	Hypersaline Lake Sediment	MIKKLIEKFYGKFCRCLETPIAPENTFAAKGFCDEHPKFKHRCLKCQETIKGE
Ga0181592_109414972	3300018421	Salt Marsh	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQEAIKEE
Ga0181591_108946281	3300018424	Salt Marsh	KFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK
Ga0194014_10438973	3300019732	Sediment	MIKKLIEKFYGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK
Ga0194029_10012488	3300019751	Freshwater	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAIDVK
Ga0194024_10041908	3300019765	Freshwater	MIKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCEKCKEAINVK
Ga0213864_100287408	3300021379	Seawater	MIKKLIEKFFGKFCKCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGE
Ga0213868_105171792	3300021389	Seawater	MLKKLIEKFYGKFCKCLETPIAPENTFAAKGFCDEHSKFKHRCEKCKEAINVK
Ga0222718_103730242	3300021958	Estuarine Water	MLKKLFEKIFGKFCRCLETPKAFDVAFVPKGFCDEHPKFKHRCPKCQQAVQGV
Ga0222716_106734413	3300021959	Estuarine Water	MLKKLFEKFFGKFCRCLETPKAFDVAFVPKGFCDEHSKFKHRCQKCQEIIKGE
Ga0222715_1002039212	3300021960	Estuarine Water	MLKKLFEKIFGKFCRCLETPIAPDDAFVSKGHCDHHPKFKHRCPKCQQTIKGE
Ga0222715_104360393	3300021960	Estuarine Water	MLKKLFEKIFGKFCRCLETPKAFDVAFVPKGFCDEHPKFKHRCPKCQQTIKGE
Ga0222714_102321073	3300021961	Estuarine Water	MLKKLFEKIFGKFCRCLETPKAFDVAFVPKGFCDEHSKFKHRCQKCQEIIKGE
Ga0222714_103332451	3300021961	Estuarine Water	MIKKLFKNFFDKFCRSLETPIAPDDAFVSKGHCDHHPKFKHRCPKCQETL
Ga0222719_102414321	3300021964	Estuarine Water	EKIFGKFCRCLETPKAFDVAFVPKGFCDEHPKFKHRCPKCQQAVQGV
Ga0212030_10257902	3300022053	Aqueous	MFKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCLKCQQTIKGE
Ga0212029_10331433	3300022063	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCQKCQETIKGE
Ga0212024_10883071	3300022065	Aqueous	MIKKLFKKFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG
Ga0212021_10006745	3300022068	Aqueous	MIKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK
Ga0212028_10414284	3300022071	Aqueous	MIKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAIN
Ga0212031_10181394	3300022176	Aqueous	MLKKLIEKFYGKFCRCLETPIAPENAFPAKGFCDEHSKFKHRCPKCQQTIKGE
Ga0212031_10706162	3300022176	Aqueous	MLKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCPKCQETIKGE
Ga0212031_10799271	3300022176	Aqueous	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCLKCQQTIKGE
Ga0196905_11073683	3300022198	Aqueous	MLKKLIEKFYGKFCRCLETPIAPENTFAAKGFCDEHSKFKHRCQKCQETIKGE
Ga0196905_11468263	3300022198	Aqueous	MIKKLFKIFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSL
Ga0196901_10033443	3300022200	Aqueous	MIKKLFKIFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG
Ga0196901_10962434	3300022200	Aqueous	MLKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCPKCQQTIKGE
Ga0196901_11329821	3300022200	Aqueous	FCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0210003_10493507	3300024262	Deep Subsurface	MIKKLIEKFFGKFCRCLETPKAFDVASVPKVFCDEHPKFKHRCPKCQQTIKGE
Ga0208303_10569483	3300025543	Aqueous	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQQTIKGE
Ga0208303_10984172	3300025543	Aqueous	MLKKLIEKFFGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCQKCQETIKGE
Ga0208303_11120371	3300025543	Aqueous	RLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0208149_10637644	3300025610	Aqueous	MIKKLIEKFYGKFCRCLETPIAPENAFVVKGFCDEHPKFKHRCEKCKEAINVK
Ga0208161_10318515	3300025646	Aqueous	KMIKKLFKNFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0208161_10745751	3300025646	Aqueous	MFKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRC
Ga0208161_11038903	3300025646	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCLKCQQTIKGE
Ga0208161_11168631	3300025646	Aqueous	MFKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHSKFKHRCPK
Ga0208161_11526731	3300025646	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRC
Ga0208161_11661812	3300025646	Aqueous	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCQKCQETIKGE
Ga0208160_11630572	3300025647	Aqueous	FFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0208795_10686061	3300025655	Aqueous	MFKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCQKCQETIKGE
Ga0208898_10234892	3300025671	Aqueous	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHKCDKCQEAING
Ga0208162_10050638	3300025674	Aqueous	MIKKLFKNFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0208162_11430761	3300025674	Aqueous	LETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0208162_11697043	3300025674	Aqueous	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGE
Ga0208019_11138943	3300025687	Aqueous	KMIKKLFKIFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQESLNG
Ga0208019_11978072	3300025687	Aqueous	MIKKLFKNFFDKFCRRLETPIAPDDAFVSKGHCDDHPKFKHRCSKCQDSLNG
Ga0208150_11303333	3300025751	Aqueous	MFKKLIEKFYGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK
Ga0208767_10548011	3300025769	Aqueous	MIKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINV
Ga0208427_100134111	3300025771	Aqueous	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAVNVK
Ga0208543_11591783	3300025810	Aqueous	FGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCKEAINVK
Ga0208542_10427721	3300025818	Aqueous	MIKKLFKIFFDKFCRRLETPIAPDDVFVSKGHCDDHQKFKHRCSKCQDSLNG
Ga0209742_101324623	3300027814	Marine Sediment	MFKKLIEKFFGKFCRCLETPIAPENAFVAKGFCDEHPKFKHRCEKCNEAINVK
Ga0307380_100804895	3300031539	Soil	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGK
Ga0307378_101630665	3300031566	Soil	MIKKLIEKFYGKFCRCLETPIAPENAFAAKGFCDEHPKFKHRCPKCQQTIKGE
Ga0307375_103801051	3300031669	Soil	KLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQETIKGK
Ga0307375_104261121	3300031669	Soil	MIKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPK
Ga0348336_009861_95_256	3300034375	Aqueous	MLKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQQTIKGE
Ga0348337_080062_376_537	3300034418	Aqueous	MFKKLIEKFFGKFCRCLETPKAFDVAFVPKVFCDEHPKFKHRCPKCQQTIKGE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080649

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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