Metagenome / Metatranscriptome Family F080642

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080642
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	100 residues
Representative Sequence	MKKSCYLAVLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQEPPSK
Number of Associated Samples	96
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.53 %
% of genes near scaffold ends (potentially truncated)	32.17 %
% of genes from short scaffolds (< 2000 bps)	71.30 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.304 % of family members)
Environment Ontology (ENVO)	Unclassified (25.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.82% β-sheet: 12.78% Coil/Unstructured: 59.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04909	Amidohydro_2	23.48
PF01144	CoA_trans	3.48
PF02826	2-Hacid_dh_C	3.48
PF01425	Amidase	3.48
PF09084	NMT1	2.61
PF09587	PGA_cap	2.61
PF03942	DTW	1.74
PF07690	MFS_1	1.74
PF13532	2OG-FeII_Oxy_2	1.74
PF03795	YCII	0.87
PF13379	NMT1_2	0.87
PF01979	Amidohydro_1	0.87
PF01820	Dala_Dala_lig_N	0.87
PF13343	SBP_bac_6	0.87
PF00389	2-Hacid_dh	0.87
PF04075	F420H2_quin_red	0.87
PF01850	PIN	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.48
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	3.48
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	3.48
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	3.48
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.61
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.61
COG3148	tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain	Translation, ribosomal structure and biogenesis [J]	1.74
COG1181	D-alanine-D-alanine ligase or related ATP-grasp enzyme	Cell wall/membrane/envelope biogenesis [M]	0.87
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.39 %
Unclassified	root	N/A	1.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	74.78 %
Unclassified	root	N/A	1.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	74.78 %
Unclassified	root	N/A	1.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	73.91 %
Unclassified	root	N/A	1.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	73.91 %
Unclassified	root	N/A	1.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig124785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
2228664022\|INPgaii200_c1051113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1027	Open in IMG/M
3300000550\|F24TB_10042211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6728	Open in IMG/M
3300000559\|F14TC_100280256	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1016401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1040	Open in IMG/M
3300001431\|F14TB_100101480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4018	Open in IMG/M
3300003911\|JGI25405J52794_10005575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2274	Open in IMG/M
3300003999\|Ga0055469_10226691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300004633\|Ga0066395_10006754	All Organisms → cellular organisms → Bacteria	4073	Open in IMG/M
3300005181\|Ga0066678_10891758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300005218\|Ga0068996_10131279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300005289\|Ga0065704_10144481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1476	Open in IMG/M
3300005289\|Ga0065704_10656751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300005295\|Ga0065707_10248847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1132	Open in IMG/M
3300005332\|Ga0066388_100742899	All Organisms → cellular organisms → Bacteria → Proteobacteria	1582	Open in IMG/M
3300005363\|Ga0008090_11742280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300005536\|Ga0070697_100784510	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	843	Open in IMG/M
3300005713\|Ga0066905_101650792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300005713\|Ga0066905_101816638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300005937\|Ga0081455_10447765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300005981\|Ga0081538_10066547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2019	Open in IMG/M
3300005981\|Ga0081538_10146493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1078	Open in IMG/M
3300005983\|Ga0081540_1029090	All Organisms → cellular organisms → Bacteria	3087	Open in IMG/M
3300006797\|Ga0066659_10131267	All Organisms → cellular organisms → Bacteria → Proteobacteria	1754	Open in IMG/M
3300006797\|Ga0066659_10627183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	874	Open in IMG/M
3300006844\|Ga0075428_100508768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300006845\|Ga0075421_100467248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1504	Open in IMG/M
3300006853\|Ga0075420_100138314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2141	Open in IMG/M
3300006969\|Ga0075419_10019805	All Organisms → cellular organisms → Bacteria → Proteobacteria	4152	Open in IMG/M
3300009100\|Ga0075418_10099980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3081	Open in IMG/M
3300009100\|Ga0075418_12484155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300009137\|Ga0066709_100773556	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300009147\|Ga0114129_10621540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1397	Open in IMG/M
3300009156\|Ga0111538_13769511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300009157\|Ga0105092_10010233	All Organisms → cellular organisms → Bacteria	4918	Open in IMG/M
3300009157\|Ga0105092_10110578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1512	Open in IMG/M
3300009157\|Ga0105092_10115952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1476	Open in IMG/M
3300009162\|Ga0075423_10233719	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300009162\|Ga0075423_10701441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1068	Open in IMG/M
3300009168\|Ga0105104_10250607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	967	Open in IMG/M
3300009609\|Ga0105347_1021673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2210	Open in IMG/M
3300009792\|Ga0126374_10003029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5437	Open in IMG/M
3300009801\|Ga0105056_1017951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300009803\|Ga0105065_1033392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300009811\|Ga0105084_1007389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1616	Open in IMG/M
3300009811\|Ga0105084_1115154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300009816\|Ga0105076_1015006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1322	Open in IMG/M
3300009818\|Ga0105072_1096633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300010046\|Ga0126384_11656487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300010047\|Ga0126382_11506716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300010047\|Ga0126382_11643027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300010358\|Ga0126370_12497750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300010360\|Ga0126372_12962947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300010361\|Ga0126378_10060436	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3581	Open in IMG/M
3300010362\|Ga0126377_11047951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300010398\|Ga0126383_13242793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300011417\|Ga0137326_1019624	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300011430\|Ga0137423_1172837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	652	Open in IMG/M
3300011432\|Ga0137428_1002940	All Organisms → cellular organisms → Bacteria	5756	Open in IMG/M
3300011439\|Ga0137432_1024837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1742	Open in IMG/M
3300011440\|Ga0137433_1015450	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300012160\|Ga0137349_1030140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	895	Open in IMG/M
3300012200\|Ga0137382_10540038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	830	Open in IMG/M
3300012205\|Ga0137362_10075267	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300012208\|Ga0137376_10165113	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300012350\|Ga0137372_10080160	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300012353\|Ga0137367_10551045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300012354\|Ga0137366_10712332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300012356\|Ga0137371_10699431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300012685\|Ga0137397_10254468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1308	Open in IMG/M
3300012922\|Ga0137394_10379848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1205	Open in IMG/M
3300012929\|Ga0137404_10077448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2628	Open in IMG/M
3300012929\|Ga0137404_10224656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1601	Open in IMG/M
3300012930\|Ga0137407_11262941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300012930\|Ga0137407_11707504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300012948\|Ga0126375_10174806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1382	Open in IMG/M
3300012948\|Ga0126375_10429676	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	964	Open in IMG/M
3300012961\|Ga0164302_11612390	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300014320\|Ga0075342_1142429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300014879\|Ga0180062_1066218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300015371\|Ga0132258_10741082	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300018051\|Ga0184620_10341450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300018053\|Ga0184626_10011646	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300018072\|Ga0184635_10116092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1063	Open in IMG/M
3300018072\|Ga0184635_10182772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300018072\|Ga0184635_10231462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300018073\|Ga0184624_10130759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1093	Open in IMG/M
3300018081\|Ga0184625_10150413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1216	Open in IMG/M
3300018465\|Ga0190269_10399974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	849	Open in IMG/M
3300021560\|Ga0126371_10162813	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300022534\|Ga0224452_1150848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300022756\|Ga0222622_10355291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1022	Open in IMG/M
3300025939\|Ga0207665_10455555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300027513\|Ga0208685_1003588	All Organisms → cellular organisms → Bacteria	4547	Open in IMG/M
3300027646\|Ga0209466_1000226	All Organisms → cellular organisms → Bacteria	13222	Open in IMG/M
3300027654\|Ga0209799_1000065	All Organisms → cellular organisms → Bacteria	19204	Open in IMG/M
3300027722\|Ga0209819_10003165	All Organisms → cellular organisms → Bacteria	5222	Open in IMG/M
3300027722\|Ga0209819_10015263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2514	Open in IMG/M
3300027722\|Ga0209819_10039175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1616	Open in IMG/M
3300027722\|Ga0209819_10046385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1488	Open in IMG/M
3300027873\|Ga0209814_10008146	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300027874\|Ga0209465_10006831	All Organisms → cellular organisms → Bacteria	5010	Open in IMG/M
3300027880\|Ga0209481_10088054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1488	Open in IMG/M
3300027909\|Ga0209382_11235543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	762	Open in IMG/M
3300027952\|Ga0209889_1003281	All Organisms → cellular organisms → Bacteria	4565	Open in IMG/M
3300027956\|Ga0209820_1065876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	967	Open in IMG/M
3300027961\|Ga0209853_1151465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300031720\|Ga0307469_10703225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	917	Open in IMG/M
3300031740\|Ga0307468_100330714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1125	Open in IMG/M
3300031854\|Ga0310904_11255360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300034147\|Ga0364925_0000103	All Organisms → cellular organisms → Bacteria	26033	Open in IMG/M
3300034147\|Ga0364925_0314187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300034148\|Ga0364927_0022706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1499	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.74%
Host-Associated	Host-Associated	18.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.52%
Aquatic	Environmental → Aquatic	25.22%
Plants	Host-Associated → Plants	18.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.91%
Sediment	Environmental → Aquatic → Sediment	15.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.30%
Freshwater	Environmental → Aquatic → Freshwater	7.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Floodplain	Environmental → Terrestrial → Floodplain	2.61%
Marine	Environmental → Aquatic → Marine	1.74%
Roots	Host-Associated → Plants → Roots	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.30%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.83%
Sand	Environmental → Terrestrial → Soil → Sand	6.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.30%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.61%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_12944580	2124908045	Soil	MKKSCYLAFLLAWVLWTRTQGPTADSWTGASGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPG
INPgaii200_10511132	2228664022	Soil	MKKSCYLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTGEPQEPPPSK
F24TB_100422117	3300000550	Soil	MKKSCYLAVLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPAKRPGGAGEQQQQEAPPSK*
F14TC_1002802563	3300000559	Soil	MKKSCYLAFLLAWVLWTRTQGPTADSWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQQEPPSK*
AP72_2010_repI_A100DRAFT_10164011	3300000837	Forest Soil	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENXTTIXYYCLPDSEXPRRTPPAKKPGGREQQEPPSK*
F14TB_1001014803	3300001431	Soil	MKKSCYLAVLLAWVLWTRTQGPTADSWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPVKRPGGAGEQQQQEAPPSK*
JGI25405J52794_100055752	3300003911	Tabebuia Heterophylla Rhizosphere	MKKSCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRKPPAKRPGGPEQQEPPSK*
Ga0055469_102266911	3300003999	Natural And Restored Wetlands	VKRLCCLTLLLAWTLWIRTQGPTPESWTATTGFQNQQRCQNNMREKLDVWRQFTDAKFTGNSVTFTENKTTVTYYCLPDNEDTAKAAETTRESPRTITKLG
Ga0066395_100067543	3300004633	Tropical Forest Soil	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSK*
Ga0066678_108917581	3300005181	Soil	MKKSCYLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMSFYCLPDSEDPRRKPVTKRPGGTGEQQQEPPPSK*
Ga0068996_101312791	3300005218	Natural And Restored Wetlands	MKKSCTLAFVLAWVLWTRTQGPATDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMTFYCLPDSED
Ga0065704_101444812	3300005289	Switchgrass Rhizosphere	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFENQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPTKRPGGAGEQQQQEPPPSK*
Ga0065704_106567512	3300005289	Switchgrass Rhizosphere	MKKSCYLAFFGAWVLWTRTQGPTADGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPD
Ga0065707_102488471	3300005295	Switchgrass Rhizosphere	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFENQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPAKRPGGAGEQQQQEAPPSK*
Ga0066388_1007428992	3300005332	Tropical Forest Soil	MKKSYSLVLLLAWVLWARTQGPTADGWTGTAGFQNQEKCMDNMKEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPAGREQQEPPSK*
Ga0008090_117422801	3300005363	Tropical Rainforest Soil	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPHRTPPAKKPGGREQQEPPSK*
Ga0070697_1007845101	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSCYWAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMSFYCLPDSEDPRRKPVTKRPAGTGEQQQEPPPSK*
Ga0066905_1016507921	3300005713	Tropical Forest Soil	MKKSCSLALLLAWVLWTRTQGPTVDGWTGASGFQNQEKCMANMKEKLDIWRQFRDAKFAGNSVTFSENKTTITYYCLPESEDPRRKPTPKRPSGPEQQEAPSK*
Ga0066905_1018166382	3300005713	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFKDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPG
Ga0081455_104477652	3300005937	Tabebuia Heterophylla Rhizosphere	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFQNEEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPAKRPGGAGEQQQQEPPPSK*
Ga0081538_100665473	3300005981	Tabebuia Heterophylla Rhizosphere	LAVLLAWVLWTRTQGPTADSWVGAPGFLNQEKCLASMKEKLDLWRQFKDAKFAPNAVTFTDTKTTLTYYCLHDTEDPRRKPKRPGGAELREPTAK*
Ga0081538_101464932	3300005981	Tabebuia Heterophylla Rhizosphere	MKRSCYLAVSLAWVLWIRTQGPTVDSWVGAPGFMNQEKCLASMKEKLDLWRQFKETKFTSNAVTFTDTKTTMTYYCLRDNEDPRRKPKRPGSAEPQEPSSK*
Ga0081540_10290901	3300005983	Tabebuia Heterophylla Rhizosphere	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRKPPAKKPGGPEQQEPRSK*
Ga0066659_101312673	3300006797	Soil	MKKSCTLAFVLAWVLWTRTQGPTTDGWMGASGFQNQEKCLANMKEKLDLYRQFRDAKFTGNAVTFTENKTTMFFYCLPDSEDPRRKPTKRPGGTGELQEPPSK*
Ga0066659_106271831	3300006797	Soil	SYRFWGSTGKRRGRWRDQSMKKSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMSFYCLPDSEDPRRKPVTKRPGGTGEPQEPPPSK*
Ga0075428_1005087681	3300006844	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGVSGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQQEPPSK*
Ga0075421_1004672482	3300006845	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGVSGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRR
Ga0075420_1001383141	3300006853	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGVSGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQ
Ga0075419_100198055	3300006969	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGVSGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQKQQEPPSK*
Ga0075418_100999804	3300009100	Populus Rhizosphere	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFQNQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPTKRPGGAGEHQQQEPPPSK*
Ga0075418_124841551	3300009100	Populus Rhizosphere	MRKSCALAFLLAWVLWTRTQGPATDGWTGASGFQNQERCMANMKEKLDIYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTGEPQEPPPSK*
Ga0066709_1007735562	3300009137	Grasslands Soil	MKKSCYLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMFFYCLPDSEDPRRKPTKRPGGTGELQEPPSK*
Ga0114129_106215402	3300009147	Populus Rhizosphere	MKKSCTLAFLFAWVLWTRTQGPTTDGWTGVSGFQNQERCMANMKEKLDIYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTGEPQEPPPSK*
Ga0111538_137695111	3300009156	Populus Rhizosphere	MKKSCSLALLLAWVLWTRTQGPTVDGWTGASGFENQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPESEDPRRKPPPTKRPGGTGEKQQEPPSK*
Ga0105092_100102332	3300009157	Freshwater Sediment	MKKSCYLAVLLAWVLWTRTQGPTADSWVGAPGFLNQEKCLASMKEKLDLWRQFKDAKFTPNTVTFTDTKSTMTYYCLHDTEDPRRKPKRPGGTGEAQEPPSK*
Ga0105092_101105782	3300009157	Freshwater Sediment	MKKSCSLALLLAWVLWTRTHGPTVDGWTGAAGFQNQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPAKRPGGAGEQQQQEPPPSK*
Ga0105092_101159522	3300009157	Freshwater Sediment	MKKSCYLAVLLVWVLWTRTQGPTVDSWVGAAGFLNQEKCLASMKEKLDLWRQFKDAKFAPNAVTFTDTKTSMTYYCLRDTEDPRRKPKRPGSAELQEQPPK*
Ga0075423_102337192	3300009162	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQKQQEPPSK*
Ga0075423_107014412	3300009162	Populus Rhizosphere	MKKSCTLAFLFAWVLWTRTQGPTTDGWTGVSGFQNQERCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTGEPREPPPSK*
Ga0105104_102506072	3300009168	Freshwater Sediment	MKKSCYLALLLAWVRWIRTQGPGVDSWTGASGFQNQAKCLASMKEKLDLWRQFKDTKFAGNAVTFTDTRTTMIYYCLPDSEDPRRKAKRPGGTGEPQEPPSK*
Ga0105347_10216731	3300009609	Soil	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNTVTFTDNRTTVTYYCLPDSEDPRRKFKRPANPGEPQEPPSK*
Ga0126374_100030292	3300009792	Tropical Forest Soil	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQESPSR*
Ga0105056_10179512	3300009801	Groundwater Sand	MKRSCTLAFLLAWVLWTRTQGPTTDGWTGVSGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSGPEQQEPPSK*
Ga0105065_10333921	3300009803	Groundwater Sand	CTLAFLLAWVLWTRTQGPTTDGWTGVSGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSGPEQQEPPSK*
Ga0105084_10073891	3300009811	Groundwater Sand	MKRSCTLALLLAWVLWTRTQGPTTDGWTGVSGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSGPEQQEPPSK*
Ga0105084_11151541	3300009811	Groundwater Sand	MRKSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMIFYCLPDSEDPRRKPTKRPGGIGEPQEPPSK*
Ga0105076_10150062	3300009816	Groundwater Sand	MKRSCTLAFLLAWVLWTRTQGPTTDGWTGVSGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSG
Ga0105072_10966331	3300009818	Groundwater Sand	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSGPEQQEPPSK*
Ga0126380_114993931	3300010043	Tropical Forest Soil	MKKSYSLVLLLAWVLWARTQGPTADGWTGTAGFQNQEKCMDNMKEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCL
Ga0126384_116564871	3300010046	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFKDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPP
Ga0126382_115067161	3300010047	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFKDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGG
Ga0126382_116430272	3300010047	Tropical Forest Soil	MKNSCSLTLLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGG
Ga0126370_124977501	3300010358	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSK*
Ga0126372_129629471	3300010360	Tropical Forest Soil	LLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSK*
Ga0126378_100604362	3300010361	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFKDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSR*
Ga0126377_110479511	3300010362	Tropical Forest Soil	TGSSAMRKLCSLALLLAWVLWTRTQGPTVDSWTGVGGFPNQEKCMANMKEKLDIWQQFRDAKFAGNSVTFSENKTTINYYCLPESEDPRRKPAPK*
Ga0126383_132427932	3300010398	Tropical Forest Soil	MKNTRSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGG
Ga0137326_10196241	3300011417	Soil	VSVLLAWTMWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNKTTVTYYCLPDSEDPRRKFKRPANPGEPQEPPSK*
Ga0137423_11728372	3300011430	Soil	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNKTTVTYYCLPDTEDPRRKFKRPANP
Ga0137428_10029403	3300011432	Soil	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNKTTVTYYCLPDSEDPRRKFKRPANPGEPQEPPSK*
Ga0137432_10248373	3300011439	Soil	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTENRTTLTYYCLPDKDDPRRKIKRPAIPPEP*
Ga0137433_10154502	3300011440	Soil	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNRTTVTYYCLPDSEDPRRKFKRPANPGEPQEPPSK*
Ga0137349_10301402	3300012160	Soil	AFLLAWVLWTRTQGPTTDGWTGAIGFQNQEKCLANMKEKLDLYRQFKDAKFAGNTVTFTENKMTMTFYCLPDSEDPRRKATKRPGNAPGNTPEAQEPPSK*
Ga0137382_105400382	3300012200	Vadose Zone Soil	MKGSFLVSYRFWGSTGKRRGRWRDQSMKKSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDLYRQFRDAKFTGNAVTFTENKTTMFFYCLPDSEDPRRKPTKRPGGTGELQEPPSK*
Ga0137362_100752673	3300012205	Vadose Zone Soil	MKKSCYLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMSFYCLPDSEDPRRKPVTKRPGG
Ga0137376_101651132	3300012208	Vadose Zone Soil	MKGSFLVSYRFWGSTGKRRGRWRDQSMKKSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMFFYCLPDSEDPRRKPTKRPGGTGELQEPPSK*
Ga0137372_100801602	3300012350	Vadose Zone Soil	MKKSCYVAVLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQEPPSK*
Ga0137367_105510452	3300012353	Vadose Zone Soil	QSMKKSCYLAVLLAWVLWTRTQGPTADGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQEPPSK*
Ga0137366_107123322	3300012354	Vadose Zone Soil	MKKSCYVAVLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQQEPPSK*
Ga0137371_106994312	3300012356	Vadose Zone Soil	MKKSCYVAVLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPK
Ga0137397_102544683	3300012685	Vadose Zone Soil	MKKSCYLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPATKRPGGTGEPQEPPSK*
Ga0137394_103798482	3300012922	Vadose Zone Soil	MKKSCTLAFLFAWVLWTRTQGPTTDGWTGVSGFQNQERCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTAEPQEPPPSK*
Ga0137404_100774483	3300012929	Vadose Zone Soil	MKKSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMFFYCLPDSEDPRRKPTKRPGGTGELQEPPSK*
Ga0137404_102246561	3300012929	Vadose Zone Soil	MKKSCTLAFLFAWVLWTRTQGPTTDGWTGVSGFQNQERCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTGEPQEPPPSK*
Ga0137407_112629412	3300012930	Vadose Zone Soil	MKKSCTLAFLLAWVLWTRTQGPATDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPATKRPGGTGEPQEPPSK*
Ga0137407_117075041	3300012930	Vadose Zone Soil	MKQSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDLYRQFRDAKFTGNAVTFTENKTTMFFYCLPDSEDPRRKPTKRPGGTGELQEPPSK*
Ga0126375_101748062	3300012948	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFKDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAK
Ga0126375_104296762	3300012948	Tropical Forest Soil	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSR*
Ga0164302_116123902	3300012961	Soil	TQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMAFYCLPDSEDPRRKPATKRPGGTGEPQEPPPSK*
Ga0075342_11424292	3300014320	Natural And Restored Wetlands	MKMSMSCTLVVLLAWVLWTRTQSPTSDGWTGASGFQNQEKCLANMKEKLDIWRQFKDAKFTGNAVTFTENQTTLSYYCLPDSE
Ga0180062_10662181	3300014879	Soil	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNKTTVTYYCLPDTEDPRRKFKRPANPGEPQEPPSK*
Ga0132258_107410823	3300015371	Arabidopsis Rhizosphere	MRKLCALAFLLAWVLWTRTQGPATDGWTGASGFQNQERCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMSFYCLPDSEDP
Ga0182037_114543682	3300016404	Soil	MWWLKRESGGEGQLMKKSWYLALLLAWVLWTRTQGPAADNWSGAAGFPNQEKCMANMKEKLDIYRQFKDAKFAGNAVTFTENKTT
Ga0184620_103414501	3300018051	Groundwater Sediment	IVSRLVIAAETVSGTQWEAAWRGLSMKKSCVWAFLLAWVLWTRTQGPATDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPATKRPGGTGEQQQEPPPSK
Ga0184626_100116463	3300018053	Groundwater Sediment	MKRSCYLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTFYCLPESEDPRRKPVTKRPGGTGEPQEPPSK
Ga0184635_101160921	3300018072	Groundwater Sediment	MRKSCTLAFVLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFAGNTVTFTENKMTMTFYCLPDSEDPRRKATKRPGNAPGNTPEAQEPPSK
Ga0184635_101827722	3300018072	Groundwater Sediment	MKRSCYLAFLLAWVLWTRTQGPATDGWTGATGFQNQEKCLANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMSFYCLPESEDPRRK
Ga0184635_102314621	3300018072	Groundwater Sediment	MKKSCVWAFLLAWVLWTRTQGPATDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPATKRPGGTGEQQQEPLPSK
Ga0184624_101307592	3300018073	Groundwater Sediment	MRKSCTLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFAGNTVTFTENKMTMTFYCLPDSEDPRRKATKRPGNAPGNTPEAQEPPSK
Ga0184625_101504132	3300018081	Groundwater Sediment	MKRSCYLAFLLAWVLWTRTQGPTTDGWTGATGFQNQEKCLANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPTKRPGGTGEPQEPPSK
Ga0190269_103999741	3300018465	Soil	MKKSCYLAVLLAWVLWTRTQGPTTDGWTGASGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQEPPSK
Ga0126371_101628132	3300021560	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSK
Ga0224452_11508481	3300022534	Groundwater Sediment	KKSCTLAFLLAWVLWTRTQGPATDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPATKRPGGTGGPQEPPSK
Ga0222622_103552911	3300022756	Groundwater Sediment	MKKSCVWAFLLAWVLWTRTQGPATDGWTGASGFQNQEKCMANMKEKLDLYRQFRDAKFAGNAVTFTENKTTMSFYCLPESEDPRRKPTK
Ga0207665_104555552	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFTGNAVTFTENKTTMSFYCLPDSEDPRRKPVTKRPGGTGEQQQEPPPSK
Ga0208685_10035882	3300027513	Soil	VKRFCYVSVLLAWTMWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNKTTVTYYCLPDTEDPRRKFKRPANPGEPQEPPSK
Ga0209466_10002266	3300027646	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSR
Ga0209799_100006512	3300027654	Tropical Forest Soil	MKKSYSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFKDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSR
Ga0209819_100031652	3300027722	Freshwater Sediment	MKKSCYLAVLLAWVLWTRTQGPTVDSWVGAPGFLNQEKCLASMREKLDLWRQFKETKFASNAVTFTDTKTTMTYYCLRDTEDPRRKPKRPGGTGEPQEPPSK
Ga0209819_100152632	3300027722	Freshwater Sediment	MKKSCYLAVLLVWVLWTRTQGPTADSWVGALGFLNQEKCLASMKEKLDLWRQFKDAKFASNAVTFTDTKTTMTYYCLRDTEDPRRKPKRPDGTGEPQEPPSK
Ga0209819_100391754	3300027722	Freshwater Sediment	MKKSCYLAVLLAWVLWTRTQGPTVDSWVGAAGFLNQEKCLASMKEKLDLWRQFKDAKFAPNAVTFTDTKTSMTYYCLRDTEDPRRKPKRPGSAELQEQPPK
Ga0209819_100463852	3300027722	Freshwater Sediment	MKKSCYLAVLLAWVLWTRTQGPTADSWVGAPGFLNQEKCLASMKEKLDLWRQFKDAKFTPNTVTFTDTKSTMTYYCLHDTEDPRRKPKRPGGTGEAQEPPSK
Ga0209814_100081465	3300027873	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGVSGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQKQQEPPSK
Ga0209465_100068314	3300027874	Tropical Forest Soil	MKNTCSLALLLAWVLWARTQGPTVDSWTGTSGFQNQEKCMANMNEKLDIWRQFRDAKFAGNSVTFTENKTTITYYCLPDSEDPRRTPPAKKPGGREQQEPPSK
Ga0209481_100880542	3300027880	Populus Rhizosphere	MKKSCYLAFLLAWVLWTRTQGPTADSWTGVSGFQNQEKCLANMKEKLDIWRQFRDAKFAGNAVTFTENKTTVTYYCLPESEDPRRKPPPKRPGGTGEQQQQEPPSK
Ga0209382_112355431	3300027909	Populus Rhizosphere	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFENQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPP
Ga0209889_10032813	3300027952	Groundwater Sand	MKRSCTLAFLLAWVLWTRTQGPTTDGWTGVSGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSGPEQQEPPSK
Ga0209820_10658762	3300027956	Freshwater Sediment	AVLLAWVLWTRTQGPTADSWVGAPGFLNQEKCLASMKEKLDLWRQFKDAKFTPNTVTFTDTKTTMTYYCLRDTEDPRRKPKRPGGTGEAQEPPSK
Ga0209853_11514651	3300027961	Groundwater Sand	WRGRWRGESMKRSCTLAFLLAWVLWTRTQGPTTDGWTGVSGFQNQEKCLANMKEKLDIWRQFKDAKFAGNAVTFTENKTTMTYYCLPDSEDPRRKPPAKRPSGPEQQEPPSK
Ga0307469_107032253	3300031720	Hardwood Forest Soil	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFENQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSE
Ga0307468_1003307142	3300031740	Hardwood Forest Soil	MKKSCSLALLLAWVLWTRTQGPTVDGWTGAAGFENQEKCLANMKEKLDIWRQFRDAKFAGNSVTFTENKTTMTYYCLPDSEDPRRKPPPTKRPGGAGEQQQQEPPPSK
Ga0310904_112553601	3300031854	Soil	MRKLCALAFLLAWVLWTRTQGPATDGWTGASGFQNQERCMANMKEKLDLYRQFKDAKFAGNAVTFTENKTTMSFYCLPDSEDPR
Ga0364925_0000103_16877_17143	3300034147	Sediment	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNTVTFTDNRTTVTYYCLPDSEDPRRKFKRPANPGEPQEPPSK
Ga0364925_0314187_253_576	3300034147	Sediment	MKKSCTLAFLLAWVLWTRTQGPTTDGWTGASGFQNQEKCMANMKEKLDLYRQFKDAKFAGNTVTFTENKMTMTFYCLPDSEDPRRKATKRPGNAPGNTPEAQEPPSK
Ga0364927_0022706_101_367	3300034148	Sediment	MWIRTQGPAPESWTAATGFQDQQKCQANMREKLDFWRQFKDAKFAGNAVTFTDNKTTVTYYCLPDTEDPRRKFKRPANPGEPQEPPSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080642

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences