Metagenome Family F080593

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080593
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	52 residues
Representative Sequence	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIKLLKG
Number of Associated Samples	23
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	18.26 %
% of genes from short scaffolds (< 2000 bps)	72.17 %
Associated GOLD sequencing projects	19
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (19.130 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (72.174 % of family members)
Environment Ontology (ENVO)	Unclassified (73.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.00% β-sheet: 0.00% Coil/Unstructured: 45.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.29.16.1: IVS-encoded protein-like	d2rlda1	2rld	0.95517
a.29.16.1: IVS-encoded protein-like	d2gsca1	2gsc	0.90798
a.2.17.1: VPS23 C-terminal domain	d2f6ma2	2f6m	0.89262
a.24.27.1: MW0975(SA0943)-like	d2ap3a1	2ap3	0.87666
a.2.17.2: VPS28 N-terminal domain	d2f6mb2	2f6m	0.87448

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF05866	RusA	8.70
PF04404	ERF	6.09
PF04851	ResIII	1.74
PF12705	PDDEXK_1	1.74
PF01402	RHH_1	0.87
PF01844	HNH	0.87
PF12651	RHH_3	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	8.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	75.65 %
Unclassified	root	N/A	19.13 %
cellular organisms	root	All Organisms → cellular organisms	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.22 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001961\|GOS2240_1027830	All Organisms → Viruses	1337	Open in IMG/M
3300002526\|JGI24818J35693_1043707	Not Available	668	Open in IMG/M
3300012919\|Ga0160422_10036035	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2869	Open in IMG/M
3300012919\|Ga0160422_10096710	All Organisms → Viruses	1739	Open in IMG/M
3300012919\|Ga0160422_10115029	All Organisms → Viruses	1593	Open in IMG/M
3300012919\|Ga0160422_10178810	All Organisms → Viruses	1279	Open in IMG/M
3300012919\|Ga0160422_10178906	All Organisms → Viruses	1279	Open in IMG/M
3300012919\|Ga0160422_10198626	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300012919\|Ga0160422_10260676	Not Available	1060	Open in IMG/M
3300012919\|Ga0160422_10314455	All Organisms → Viruses	965	Open in IMG/M
3300012919\|Ga0160422_10367799	All Organisms → Viruses	892	Open in IMG/M
3300012919\|Ga0160422_10405899	All Organisms → Viruses	849	Open in IMG/M
3300012919\|Ga0160422_10475918	All Organisms → Viruses	784	Open in IMG/M
3300012919\|Ga0160422_10502385	All Organisms → Viruses	763	Open in IMG/M
3300012919\|Ga0160422_10517037	All Organisms → Viruses	752	Open in IMG/M
3300012919\|Ga0160422_10542660	All Organisms → Viruses	734	Open in IMG/M
3300012919\|Ga0160422_10622235	Not Available	686	Open in IMG/M
3300012919\|Ga0160422_10697604	All Organisms → Viruses	648	Open in IMG/M
3300012919\|Ga0160422_10768903	Not Available	617	Open in IMG/M
3300012919\|Ga0160422_10778556	All Organisms → Viruses	613	Open in IMG/M
3300012919\|Ga0160422_11036674	All Organisms → Viruses	531	Open in IMG/M
3300012919\|Ga0160422_11171774	All Organisms → Viruses	500	Open in IMG/M
3300012920\|Ga0160423_10923740	Not Available	585	Open in IMG/M
3300012928\|Ga0163110_10079460	All Organisms → Viruses	2142	Open in IMG/M
3300012928\|Ga0163110_10257062	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1262	Open in IMG/M
3300012928\|Ga0163110_10341515	All Organisms → Viruses	1107	Open in IMG/M
3300012928\|Ga0163110_11777013	Not Available	503	Open in IMG/M
3300012954\|Ga0163111_10074204	All Organisms → cellular organisms → Bacteria	2721	Open in IMG/M
3300012954\|Ga0163111_10162769	All Organisms → Viruses	1899	Open in IMG/M
3300020267\|Ga0211648_1005504	Not Available	3350	Open in IMG/M
3300020267\|Ga0211648_1014093	Not Available	1819	Open in IMG/M
3300020278\|Ga0211606_1008914	All Organisms → Viruses	2541	Open in IMG/M
3300020278\|Ga0211606_1023168	All Organisms → Viruses	1354	Open in IMG/M
3300020282\|Ga0211667_1025269	All Organisms → Viruses	1546	Open in IMG/M
3300020282\|Ga0211667_1057328	All Organisms → Viruses	972	Open in IMG/M
3300020282\|Ga0211667_1100048	Not Available	706	Open in IMG/M
3300020284\|Ga0211649_1044807	All Organisms → Viruses	528	Open in IMG/M
3300020377\|Ga0211647_10022324	Not Available	2523	Open in IMG/M
3300020377\|Ga0211647_10024950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2359	Open in IMG/M
3300020377\|Ga0211647_10069576	All Organisms → Viruses	1254	Open in IMG/M
3300020386\|Ga0211582_10192779	All Organisms → Viruses	756	Open in IMG/M
3300020392\|Ga0211666_10062815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1558	Open in IMG/M
3300020392\|Ga0211666_10151718	All Organisms → Viruses	907	Open in IMG/M
3300020392\|Ga0211666_10231930	All Organisms → Viruses	703	Open in IMG/M
3300020392\|Ga0211666_10347361	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	549	Open in IMG/M
3300020392\|Ga0211666_10396962	All Organisms → Viruses	504	Open in IMG/M
3300020400\|Ga0211636_10108487	All Organisms → Viruses	1119	Open in IMG/M
3300020400\|Ga0211636_10408885	Not Available	506	Open in IMG/M
3300020401\|Ga0211617_10061351	All Organisms → Viruses	1577	Open in IMG/M
3300020401\|Ga0211617_10442800	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	535	Open in IMG/M
3300020404\|Ga0211659_10019352	Not Available	3354	Open in IMG/M
3300020404\|Ga0211659_10436572	All Organisms → Viruses	565	Open in IMG/M
3300020430\|Ga0211622_10140184	Not Available	1042	Open in IMG/M
3300020430\|Ga0211622_10301278	Not Available	686	Open in IMG/M
3300020430\|Ga0211622_10376322	All Organisms → Viruses	608	Open in IMG/M
3300020433\|Ga0211565_10033376	Not Available	2184	Open in IMG/M
3300020433\|Ga0211565_10410651	All Organisms → Viruses	591	Open in IMG/M
3300020446\|Ga0211574_10006275	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5933	Open in IMG/M
3300020446\|Ga0211574_10010911	All Organisms → Viruses	4407	Open in IMG/M
3300020446\|Ga0211574_10027117	All Organisms → Viruses	2661	Open in IMG/M
3300020446\|Ga0211574_10124047	All Organisms → Viruses	1131	Open in IMG/M
3300020446\|Ga0211574_10289763	All Organisms → Viruses	708	Open in IMG/M
3300020446\|Ga0211574_10465177	All Organisms → Viruses	544	Open in IMG/M
3300020450\|Ga0211641_10012636	All Organisms → Viruses	4832	Open in IMG/M
3300020450\|Ga0211641_10295823	Not Available	791	Open in IMG/M
3300020450\|Ga0211641_10357253	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300020450\|Ga0211641_10502962	All Organisms → Viruses	578	Open in IMG/M
3300020450\|Ga0211641_10596432	All Organisms → Viruses	519	Open in IMG/M
3300027622\|Ga0209753_1007910	Not Available	3839	Open in IMG/M
3300027699\|Ga0209752_1046653	All Organisms → Viruses	1454	Open in IMG/M
3300029309\|Ga0183683_1003505	Not Available	5387	Open in IMG/M
3300029309\|Ga0183683_1004427	All Organisms → cellular organisms → Bacteria	4545	Open in IMG/M
3300029309\|Ga0183683_1004463	All Organisms → Viruses	4515	Open in IMG/M
3300029309\|Ga0183683_1004490	All Organisms → Viruses	4492	Open in IMG/M
3300029309\|Ga0183683_1004953	All Organisms → Viruses	4174	Open in IMG/M
3300029309\|Ga0183683_1005525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3824	Open in IMG/M
3300029309\|Ga0183683_1005659	All Organisms → Viruses	3754	Open in IMG/M
3300029309\|Ga0183683_1005753	All Organisms → Viruses → Predicted Viral	3715	Open in IMG/M
3300029309\|Ga0183683_1006605	All Organisms → Viruses	3345	Open in IMG/M
3300029309\|Ga0183683_1008908	All Organisms → Viruses → Predicted Viral	2678	Open in IMG/M
3300029309\|Ga0183683_1008934	All Organisms → Viruses	2672	Open in IMG/M
3300029309\|Ga0183683_1009568	All Organisms → Viruses → Predicted Viral	2534	Open in IMG/M
3300029309\|Ga0183683_1009850	All Organisms → Viruses	2472	Open in IMG/M
3300029309\|Ga0183683_1011805	All Organisms → Viruses → Predicted Viral	2146	Open in IMG/M
3300029309\|Ga0183683_1012059	All Organisms → Viruses	2112	Open in IMG/M
3300029309\|Ga0183683_1012109	All Organisms → Viruses → Predicted Viral	2103	Open in IMG/M
3300029309\|Ga0183683_1012315	All Organisms → Viruses	2075	Open in IMG/M
3300029309\|Ga0183683_1014119	Not Available	1862	Open in IMG/M
3300029309\|Ga0183683_1014879	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1784	Open in IMG/M
3300029309\|Ga0183683_1015227	All Organisms → Viruses → Predicted Viral	1752	Open in IMG/M
3300029309\|Ga0183683_1016214	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1660	Open in IMG/M
3300029309\|Ga0183683_1018250	All Organisms → Viruses	1498	Open in IMG/M
3300029309\|Ga0183683_1018553	All Organisms → Viruses	1478	Open in IMG/M
3300029309\|Ga0183683_1020196	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1371	Open in IMG/M
3300029309\|Ga0183683_1020830	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1336	Open in IMG/M
3300029309\|Ga0183683_1021266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1311	Open in IMG/M
3300029309\|Ga0183683_1023808	Not Available	1185	Open in IMG/M
3300029309\|Ga0183683_1024692	All Organisms → Viruses	1146	Open in IMG/M
3300029309\|Ga0183683_1024841	All Organisms → Viruses	1140	Open in IMG/M
3300029309\|Ga0183683_1026643	All Organisms → Viruses	1073	Open in IMG/M
3300029309\|Ga0183683_1029395	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	983	Open in IMG/M
3300029309\|Ga0183683_1030089	All Organisms → Viruses	963	Open in IMG/M
3300029309\|Ga0183683_1032489	All Organisms → Viruses	896	Open in IMG/M
3300029309\|Ga0183683_1033754	All Organisms → Viruses	866	Open in IMG/M
3300029309\|Ga0183683_1034201	All Organisms → Viruses	855	Open in IMG/M
3300029309\|Ga0183683_1036004	All Organisms → Viruses	815	Open in IMG/M
3300029309\|Ga0183683_1036335	Not Available	808	Open in IMG/M
3300029309\|Ga0183683_1036341	All Organisms → Viruses	808	Open in IMG/M
3300029309\|Ga0183683_1039866	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	741	Open in IMG/M
3300029309\|Ga0183683_1043602	All Organisms → Viruses	681	Open in IMG/M
3300029309\|Ga0183683_1048511	All Organisms → Viruses	617	Open in IMG/M
3300029309\|Ga0183683_1048808	All Organisms → Viruses	614	Open in IMG/M
3300029309\|Ga0183683_1052331	All Organisms → Viruses	574	Open in IMG/M
3300029309\|Ga0183683_1056136	All Organisms → Viruses	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	72.17%
Oceanic	Environmental → Aquatic → Marine → Oceanic	26.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	72.17%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	24.35%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	72.17%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	17.39%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	6.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.61%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300002526	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300020267	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108)	Environmental	Open in IMG/M
3300020278	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556076-ERR599151)	Environmental	Open in IMG/M
3300020282	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169)	Environmental	Open in IMG/M
3300020284	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556128-ERR598952)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020386	Marine microbial communities from Tara Oceans - TARA_B100000609 (ERX555990-ERR599038)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300027622	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m (SPAdes)	Environmental	Open in IMG/M
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2240_10278301	3300001961	Marine	MNELQDEIQRRLEQYYVQLAALENAYFHHEIEPKEYLVQYEKIKNKIELLKG*
JGI24818J35693_10437072	3300002526	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVQYEKVKEKIRLLER*
Ga0160422_100360353	3300012919	Seawater	MNQFEEEIKRRIKHYYDQLAALENAYFNHEIKAKEYIVQYEKVKEKIRLLER*
Ga0160422_100967106	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYYNREIEAKEYVVEYEKIKGKIELLQT*
Ga0160422_101150292	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIKLLKG*
Ga0160422_101788104	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYFYDEIKPKEYLVQYEKIK
Ga0160422_101789062	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYIVEYEKIKGKIKLLKG*
Ga0160422_101986261	3300012919	Seawater	MNQFEEEIKRRIKHYYDQLAALENAYNNHEMKVQEYIAEYDKIKSKIELLER*
Ga0160422_102606761	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYFHHEIEAKEYVVEYEKIKGKIKLLKG*
Ga0160422_103144554	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYFHHDIKPKEYVVQYEKIKDKIKLLKG*
Ga0160422_103677995	3300012919	Seawater	MNELQDEIQRRLEQYYVQLAALENAYFYHEIEPKEYVVQYEKIKAKIKLLE*
Ga0160422_104058994	3300012919	Seawater	MNQFEQEIKRRIKHYNNQLAALENAYFNHEIKAKEYIVQYEKVKEKIRL
Ga0160422_104759182	3300012919	Seawater	MSGDKMNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYILQYENIKGKIELLKG*
Ga0160422_105023852	3300012919	Seawater	MNQFEVEIKRRLKKYHAQLAELENAFYNHEIADKDYVVEYEKIKAKIQLLE*
Ga0160422_105170372	3300012919	Seawater	MNQFEQEIKRRIKHYNDQLAALENAYFHHEIKQKEYVVEYEKIKAKIKLLKG*
Ga0160422_105426604	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKAKIELLQT*
Ga0160422_106222354	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAYFHHEIDRKEYVVQYEKIKAKIK
Ga0160422_106976042	3300012919	Seawater	MNELEEEIQRRLKHYYVQLAALENAYFYHEIEPKEYVVQYEKIKAKIKLLE*
Ga0160422_107689031	3300012919	Seawater	MNQFEQEIKRRLKQYYAQLAAYENAYNNHEMEAKEYLVCYEKVKEKIRLLER*
Ga0160422_107785561	3300012919	Seawater	MNQFEQEIKRRLKQYYAKLAAYEYAYNNHEMEAKEYLVCCEKIKEKIGLLER*
Ga0160422_110366741	3300012919	Seawater	MNQFEQEIKRRIKHYYDQLAALENAFYNHEIADKDYVVEYEKIKAKIQLLE*
Ga0160422_111717742	3300012919	Seawater	MAKEMNQFKQEIKRRIKHYYEQLAALENAYMNHKIESKEYIIEYKKIKGKIELLKG*
Ga0160423_109237403	3300012920	Surface Seawater	MNELEEEIQRRLEQYYVQLAALENAYFHHEIEPKEYVVQYEKIKAKIKLLE*
Ga0163110_100794607	3300012928	Surface Seawater	MNEFEVEIKRRLKKYYSQLAELENAFYHHEIADKDYVVEYEKIKAKIQLLE*
Ga0163110_102570623	3300012928	Surface Seawater	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES*
Ga0163110_103415153	3300012928	Surface Seawater	MVKEMNQFEQEIKRRIKHYYDQLTALENAYYNHEIESKEYIIEYEKIKGKIELLKG*
Ga0163110_117770131	3300012928	Surface Seawater	MNQFEQEIKRRINHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIKLLEN*
Ga0163111_100742044	3300012954	Surface Seawater	MAKKMNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES*
Ga0163111_101627694	3300012954	Surface Seawater	MNELQDEIQRRLEQYYVQLAELENAYFHHEIEPKEYVVQYEKIKAKIKLLE*
Ga0163111_109418101	3300012954	Surface Seawater	KQYYDQLAALENAYYNHEIESKEYIIEYEKIKGKIELLKG*
Ga0211648_100550411	3300020267	Marine	MNELEEEIQRRLEQYYVQLAALENAYFHHEIEPKEYVVQYEKIKAKIKLLE
Ga0211648_10140936	3300020267	Marine	MNQFEEEIKRRIKHYYDQLAALENAYFHHEIDRKEYVV
Ga0211606_10089146	3300020278	Marine	MNQLKEEIKRRIKHYYNQLAALENAYNNHEMKVQEYIAEYDKIKSKIELLEG
Ga0211606_10231682	3300020278	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIKLLKG
Ga0211667_10252692	3300020282	Marine	MNGVLRMNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIKLLKG
Ga0211667_10573282	3300020282	Marine	MNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEKIKGKIKLLKG
Ga0211667_11000482	3300020282	Marine	MNQFEEEIKRRIKHYNYQLAALENSYTNHEMKAQEYIVEYEKIKAKIKLLEN
Ga0211649_10448072	3300020284	Marine	MNQFEEEIKRRIKHYYDQLAALENAYFHHEIDRKEYVVQYEKIKGKIELLEE
Ga0211647_100223246	3300020377	Marine	MNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEKIKGKIKLLET
Ga0211647_100249507	3300020377	Marine	MNELEEEIQRRLEHYYVQLAALENAYFHHEIEPKEYVVQYEKIKAKIKLLE
Ga0211647_100695762	3300020377	Marine	MNQFEEEIKRRIKHYNDQLAALADAYFYHEIDRKEYVVQYEKIKNKIKLLKG
Ga0211582_101927792	3300020386	Marine	MNQFEEEIKRRIKHYYDQLAALENAYNNHEMKVQEYIAEYDKIKSKIELLER
Ga0211666_100628153	3300020392	Marine	MNQFEEEIKRRIKHYYDQLAALENAYFHHEIDRKEYVVQYEKIKGKIKLLEA
Ga0211666_101517181	3300020392	Marine	MNQFEQEIKRRIKHYNDQLAALENAYFHHEIEAKEYILQYENIKGKIELLK
Ga0211666_102319302	3300020392	Marine	MNQFEQEIKRRIKHYYNQLAALENAYYNHEIESKEYVVEYEKIKGKIELLKG
Ga0211666_103473612	3300020392	Marine	EIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES
Ga0211666_103969622	3300020392	Marine	MNQFEVEIKRRLKKYHAQLAELENAFYNHEIADKDYVVEYEKIKAKIQLLE
Ga0211636_101084872	3300020400	Marine	MNQFEQEIKRRVKHYYDQLAALENAYFKHEIEAKEYIVQYEQIKAKIKLLE
Ga0211636_104088852	3300020400	Marine	MNQFEQEIKRRIKHYNNQLAALADAYFYHEIDRKEYVVQYEKIKDKIKLLKG
Ga0211617_100613513	3300020401	Marine	MNQFEQEIKRRIKNYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIELLKG
Ga0211617_104428001	3300020401	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES
Ga0211659_100193522	3300020404	Marine	MNQFEEEIKRRIKHYYDQLAALENAYFHHEIEAKEYIVQYENIKDKIELLKG
Ga0211659_104365722	3300020404	Marine	MNQFEQEIERRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKDKIKLLKG
Ga0211622_101401843	3300020430	Marine	MNQFEEEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIELLKG
Ga0211622_103012782	3300020430	Marine	MNGVLRMNQFEQEIKRRLKQYYAKLAAYEYAYNSHEMEAKEYLVCCEKVKEKIRLLER
Ga0211622_103763222	3300020430	Marine	MNQFEQEIKRRIKHYYDQLAALENAFYNHEIADKDYVVEYEKIKAKIQLLE
Ga0211565_100333767	3300020433	Marine	RRLKKYYSQLAELENAFYHHEIADKDYVVEYEKIKAKIQLLE
Ga0211565_104106511	3300020433	Marine	MNQFEEEIKRRIKHYYDQLAALENAFYNHEIADKDYVVEYEKIKAKIQLLE
Ga0211574_1000627512	3300020446	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIKSKEYIVEYEKIKGKIQLLKG
Ga0211574_100109116	3300020446	Marine	VKKFGVEKMNQFEEEIKRRIKHYYDQLAALENAYFHHEIDRKEYVVQYEKIKGKIELLEE
Ga0211574_100271173	3300020446	Marine	MIGVLKMDQFEKEIKRRIDHYYYQLAAYADAYNNNEMELKEYVVECEKVKEKIRLLER
Ga0211574_101240473	3300020446	Marine	MNELKKEIQRRLEHYYVQLAALENAYFYHEIEPKEYVVQYEKIKAKIKLLE
Ga0211574_102897632	3300020446	Marine	MVKEMNQFEQEIKRRIKHYYDQLAVLENAYYNHEIESKEYIIEYEKIKSKIELLKG
Ga0211574_104651771	3300020446	Marine	SEDKMNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEKIKSKIKLLKG
Ga0211641_1001263610	3300020450	Marine	MVKEMNQFDQEIKRRIKHYYDQLAALENAYNNHEMKANEYVVEYEKIKDKIKLLKG
Ga0211641_102958231	3300020450	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIKLL
Ga0211641_103572533	3300020450	Marine	LKMNQFEQEIKRRIKHYYDQLAALENAYSKHEIESKEYVVEYEKIKAKIELLQT
Ga0211641_105029621	3300020450	Marine	MNEFEVEIKRRLKEYYSQLAELENAFYHHEIADKDYVVEYEKIKAKIQLLE
Ga0211641_105964322	3300020450	Marine	MSGDKMNQFEEEIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES
Ga0209753_10079108	3300027622	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVQYEKVKEKIRLLER
Ga0209752_10466531	3300027699	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVQYEKVKEK
Ga0183683_10035051	3300029309	Marine	MNQFEEEIKRRIKHYNDQLAALENAYFYHEIEAKEYIVQYEKIKTKIKLLEN
Ga0183683_10044275	3300029309	Marine	MNGVLRMNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEKIKAKIELLQT
Ga0183683_10044632	3300029309	Marine	MVKEMNQFEEEIKRRIKHYYDQLAALENAYYNHEIESKEYIIEYEKIKSKIELLKG
Ga0183683_10044903	3300029309	Marine	MNQFEEEIKRRIKHYKDQLAALENAYFKHEIEAKEYIVQYEKIKAKIKLLE
Ga0183683_10049533	3300029309	Marine	MNQFEEEIKRRIKHYYDQLAALENAFYNHEIESKEYIIEYDKIKSKIELLKG
Ga0183683_10055255	3300029309	Marine	MNQFEEEIKRRIKHYYDQLAALENAYFKHEIEPKEYIVQYEKIKAKIKLLE
Ga0183683_10056594	3300029309	Marine	MNGVLKMNQFEQEIKRRLKQYYEKLAAYEYAYNNHEMEAKEYLVCCEKVKEKIRLLER
Ga0183683_10057539	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYNNNEMKAKEYVVEYEKIKGKIELLKG
Ga0183683_10066054	3300029309	Marine	MNELEEEIQRRLEQYYVQLAALENSYFHHEIEPKEYVVQYEKIKGKIKLLKG
Ga0183683_10089088	3300029309	Marine	MVKKMNQFEEEIKRRIKHYYDQLAALENAYFHHEIEAKEYIVQYENIKDKIELLKG
Ga0183683_10089342	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIKAKEYVVEYEKIKGKIKLLKG
Ga0183683_10095688	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYFHHEIEAKEYILQYENIKGKIEL
Ga0183683_10098508	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIKSKEYVVEYEKIKGKIELLKG
Ga0183683_10118052	3300029309	Marine	MNQFKEEIKRRIKHYYDQLAALEDSYMNHKIKSKEYIVEYEKIKSKIELLEG
Ga0183683_10120594	3300029309	Marine	MAKKMNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEKIKGKIKLLKG
Ga0183683_10121091	3300029309	Marine	MNGVLRMNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEK
Ga0183683_10123152	3300029309	Marine	MNQFEQEIKRRIKHYNDQLAALENAYNNHEMKAKEYVVEYEKIKGKIKLLKG
Ga0183683_10141194	3300029309	Marine	MNQFEEEIKRRIKHYYDQLAALENAFYNHEIADKDYVVEYEKIKAKIKLLE
Ga0183683_10148793	3300029309	Marine	MNQFEQEIERRIKHYYDQLAALENAYYNHEIEQKEYIVEYEKVKQKIKLLES
Ga0183683_10152272	3300029309	Marine	MNQFEQEIKRRIDHYNDQLAALENAYFKHEIETKEYVVEYEKIKDKIKLLKG
Ga0183683_10162143	3300029309	Marine	MNQFEEEIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES
Ga0183683_10182505	3300029309	Marine	MNQFEVEIKRRLKKYYAQLAELENAFYHHEIADKDYVVEYEKIKAKIKLLE
Ga0183683_10185532	3300029309	Marine	MVKEMNQFEHEIKRRIKHYYDQLAALENAYYNHEIESKEYIIEYDKIKSKIELLKG
Ga0183683_10201962	3300029309	Marine	MAKEMNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIIEYDKIKSKIELLKG
Ga0183683_10208303	3300029309	Marine	MVKKMNQFEEEIKRRIKHYYDQLAALENAYYNHEIESKEYIIEYDKIKNKIELLKG
Ga0183683_10212664	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEKIKDKIKLLET
Ga0183683_10238082	3300029309	Marine	MNQFEEEIKRRIKHYNDQLAALENAYFYHEIEAKEYVVQYEKVKEKIRLLER
Ga0183683_10246921	3300029309	Marine	MNQFEVEIKRRLKKYHAQLAELENAFYNHEIADKDYVVEYEKIKAKIQL
Ga0183683_10248411	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKIELLKG
Ga0183683_10266434	3300029309	Marine	MNQFEVEIKRRLKKYYAQLAELEDAFYHHEIADKDYVVEYEKIKAKIQLLE
Ga0183683_10293951	3300029309	Marine	VKKMNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIVEYEKVKQKIKLLES
Ga0183683_10300893	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYFHHEIESKEYVVEYEKIKGKIELLKG
Ga0183683_10324893	3300029309	Marine	MNQFEEEIKRRIKHYYNQLSALDNAFYNHEIADKDYVVEYEKIKAKIKLLE
Ga0183683_10337545	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGK
Ga0183683_10342012	3300029309	Marine	MNKFEEEIKRRIKHYYDQLAALENAYFHHEIEAKEYIVQYENIKGKIELLXXXXPKQT
Ga0183683_10360041	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAFYNHEIADKDYVVE
Ga0183683_10363355	3300029309	Marine	MNQFEQEIKRRIKHYYNQLAALENAYNNHEMKAKEYVVEYEKIKDKIKLLET
Ga0183683_10363413	3300029309	Marine	MNQFEQEIKRRIKNYYDQLAELENAYNNHEMKAKEYVVESEKIKGKIKLLKG
Ga0183683_10398662	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYIIEYEKVKQKIKLLES
Ga0183683_10436024	3300029309	Marine	MNQFEQEIKRRIKHYYDQLAALENAYYNHEIESKEYVVEYEKIKGKI
Ga0183683_10485113	3300029309	Marine	MNGVLKMNQFEQEIKRRIKHYYDQLAALENAYNNHEMKAKEYVVEYEK
Ga0183683_10488084	3300029309	Marine	MNQFEQEIKRRIKHFYDQLAALENAYNNYEMKAKEYVVEYEKIKDKIKLLKG
Ga0183683_10523314	3300029309	Marine	MNQFEEEIKRRIKHYYDQLAALENAYFHHEIKPKEYVVQYEKIKAKIKLLE
Ga0183683_10561362	3300029309	Marine	KKKMNQFEVEIKRRLKKYHEQLAELENAFYNHEIADKDYVVEYEKIKAKIQLLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080593

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences