Metagenome Family F080571

Basic Information
Family ID	F080571
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	105 residues
Representative Sequence	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGSRLHPQ
Number of Associated Samples	103
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.68 %
% of genes near scaffold ends (potentially truncated)	34.78 %
% of genes from short scaffolds (< 2000 bps)	87.83 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (69.565 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.522 % of family members)
Environment Ontology (ENVO)	Unclassified (34.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.304 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.90% β-sheet: 13.87% Coil/Unstructured: 64.23%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13505	OMP_b-brl	60.87
PF03631	Virul_fac_BrkB	4.35
PF00011	HSP20	1.74
PF05494	MlaC	1.74
PF13628	DUF4142	1.74
PF00072	Response_reg	0.87
PF07730	HisKA_3	0.87
PF11154	DUF2934	0.87
PF07589	PEP-CTERM	0.87
PF09912	DUF2141	0.87
PF00005	ABC_tran	0.87
PF12732	YtxH	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	4.35
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.74
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.87
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.87
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.87
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.57 %
Unclassified	root	N/A	29.57 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.57 %
Unclassified	root	N/A	29.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	62.61 %
Unclassified	root	N/A	29.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	50.43 %
Unclassified	root	N/A	29.57 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.43 %
Unclassified	root	N/A	29.57 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.43 %
Unclassified	root	N/A	29.57 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.43 %
Unclassified	root	N/A	29.57 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.43 %
Unclassified	root	N/A	29.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.87 %
Nitrospira japonica	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	50.43 %
Unclassified	root	N/A	29.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Nitrospira sp. SCGC AG-212-E16	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	0.87 %
Nitrospira japonica	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_3496125	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300000559\|F14TC_101991192	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1020	Open in IMG/M
3300000890\|JGI11643J12802_12139547	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	3391	Open in IMG/M
3300002155\|JGI24033J26618_1050961	Not Available	594	Open in IMG/M
3300003347\|JGI26128J50194_1008311	All Organisms → cellular organisms → Bacteria → Nitrospirae	665	Open in IMG/M
3300003349\|JGI26129J50193_1001417	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1627	Open in IMG/M
3300003371\|JGI26145J50221_1008300	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	890	Open in IMG/M
3300003995\|Ga0055438_10091656	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300004463\|Ga0063356_100557105	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1535	Open in IMG/M
3300004463\|Ga0063356_101105175	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1143	Open in IMG/M
3300005289\|Ga0065704_10206989	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1123	Open in IMG/M
3300005290\|Ga0065712_10010077	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2938	Open in IMG/M
3300005295\|Ga0065707_10047648	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	784	Open in IMG/M
3300005295\|Ga0065707_10303386	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	999	Open in IMG/M
3300005334\|Ga0068869_100924830	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	756	Open in IMG/M
3300005338\|Ga0068868_100176920	All Organisms → cellular organisms → Bacteria → Nitrospirae	1769	Open in IMG/M
3300005340\|Ga0070689_100437285	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300005343\|Ga0070687_100135701	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1426	Open in IMG/M
3300005364\|Ga0070673_101802080	Not Available	580	Open in IMG/M
3300005406\|Ga0070703_10169598	Not Available	835	Open in IMG/M
3300005434\|Ga0070709_11561260	Not Available	537	Open in IMG/M
3300005439\|Ga0070711_100119891	All Organisms → cellular organisms → Bacteria → Nitrospirae	1944	Open in IMG/M
3300005439\|Ga0070711_101083018	Not Available	690	Open in IMG/M
3300005440\|Ga0070705_100203670	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1359	Open in IMG/M
3300005440\|Ga0070705_100558641	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	879	Open in IMG/M
3300005445\|Ga0070708_101630363	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	600	Open in IMG/M
3300005471\|Ga0070698_101024995	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	773	Open in IMG/M
3300005536\|Ga0070697_101727130	Not Available	560	Open in IMG/M
3300005536\|Ga0070697_101917805	Not Available	530	Open in IMG/M
3300005545\|Ga0070695_100032435	All Organisms → cellular organisms → Bacteria → Nitrospirae	3265	Open in IMG/M
3300005549\|Ga0070704_100130487	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1947	Open in IMG/M
3300005617\|Ga0068859_101389739	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	774	Open in IMG/M
3300005833\|Ga0074472_10930997	All Organisms → cellular organisms → Bacteria	8507	Open in IMG/M
3300006049\|Ga0075417_10355112	Not Available	719	Open in IMG/M
3300006050\|Ga0075028_100927136	Not Available	538	Open in IMG/M
3300006057\|Ga0075026_100597812	Not Available	648	Open in IMG/M
3300006163\|Ga0070715_10204032	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1006	Open in IMG/M
3300006173\|Ga0070716_100158222	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300006173\|Ga0070716_101443149	Not Available	561	Open in IMG/M
3300006174\|Ga0075014_100127128	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1221	Open in IMG/M
3300006174\|Ga0075014_100751876	Not Available	572	Open in IMG/M
3300006854\|Ga0075425_102553711	Not Available	565	Open in IMG/M
3300006904\|Ga0075424_100608527	Not Available	1167	Open in IMG/M
3300006904\|Ga0075424_101252551	Not Available	789	Open in IMG/M
3300009157\|Ga0105092_10403478	Not Available	778	Open in IMG/M
3300009162\|Ga0075423_10046895	All Organisms → cellular organisms → Bacteria → Proteobacteria	4440	Open in IMG/M
3300009168\|Ga0105104_10227308	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1016	Open in IMG/M
3300009823\|Ga0105078_1040662	Not Available	595	Open in IMG/M
3300010371\|Ga0134125_10235499	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300010399\|Ga0134127_10932910	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	925	Open in IMG/M
3300010400\|Ga0134122_10836879	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	883	Open in IMG/M
3300010400\|Ga0134122_11090434	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	790	Open in IMG/M
3300010401\|Ga0134121_10166926	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1886	Open in IMG/M
3300010401\|Ga0134121_10170216	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1868	Open in IMG/M
3300012884\|Ga0157300_1005011	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1431	Open in IMG/M
3300012904\|Ga0157282_10028966	All Organisms → cellular organisms → Bacteria → Nitrospirae	1215	Open in IMG/M
3300012931\|Ga0153915_11067394	Not Available	942	Open in IMG/M
3300012931\|Ga0153915_11267641	Not Available	861	Open in IMG/M
3300012951\|Ga0164300_10026282	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2083	Open in IMG/M
3300012955\|Ga0164298_10298051	All Organisms → cellular organisms → Bacteria → Nitrospirae	997	Open in IMG/M
3300012957\|Ga0164303_10427490	All Organisms → cellular organisms → Bacteria → Nitrospirae	826	Open in IMG/M
3300012960\|Ga0164301_11443959	Not Available	564	Open in IMG/M
3300012986\|Ga0164304_10141448	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1502	Open in IMG/M
3300012988\|Ga0164306_10597962	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	863	Open in IMG/M
3300012989\|Ga0164305_12268729	Not Available	500	Open in IMG/M
3300013296\|Ga0157374_10752332	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	989	Open in IMG/M
3300013297\|Ga0157378_10398737	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1355	Open in IMG/M
3300013306\|Ga0163162_10538024	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1297	Open in IMG/M
3300014326\|Ga0157380_10027470	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	4329	Open in IMG/M
3300014968\|Ga0157379_10712360	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	943	Open in IMG/M
3300015371\|Ga0132258_13179253	All Organisms → cellular organisms → Bacteria → Nitrospirae	1133	Open in IMG/M
3300015371\|Ga0132258_13189093	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1132	Open in IMG/M
3300015373\|Ga0132257_103131870	Not Available	602	Open in IMG/M
3300018067\|Ga0184611_1068632	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1203	Open in IMG/M
3300019356\|Ga0173481_10000098	All Organisms → cellular organisms → Bacteria	14574	Open in IMG/M
3300019361\|Ga0173482_10005018	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	3078	Open in IMG/M
3300019362\|Ga0173479_10018708	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1940	Open in IMG/M
3300019879\|Ga0193723_1047931	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1259	Open in IMG/M
3300022737\|Ga0247747_1040608	Not Available	564	Open in IMG/M
3300022889\|Ga0247785_1046830	Not Available	540	Open in IMG/M
3300023073\|Ga0247744_1041307	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	732	Open in IMG/M
3300025315\|Ga0207697_10139763	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1050	Open in IMG/M
3300025910\|Ga0207684_10594801	Not Available	945	Open in IMG/M
3300025916\|Ga0207663_10866818	Not Available	721	Open in IMG/M
3300025918\|Ga0207662_10118692	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1657	Open in IMG/M
3300025922\|Ga0207646_11095143	Not Available	701	Open in IMG/M
3300025927\|Ga0207687_10223955	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1482	Open in IMG/M
3300025936\|Ga0207670_10889514	Not Available	745	Open in IMG/M
3300025939\|Ga0207665_10134783	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1756	Open in IMG/M
3300026078\|Ga0207702_11308778	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	719	Open in IMG/M
3300027122\|Ga0207538_1006099	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	660	Open in IMG/M
3300027252\|Ga0209973_1023878	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	829	Open in IMG/M
3300027378\|Ga0209981_1026511	All Organisms → cellular organisms → Bacteria → Nitrospirae	842	Open in IMG/M
3300027471\|Ga0209995_1004937	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2138	Open in IMG/M
3300027617\|Ga0210002_1050543	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	716	Open in IMG/M
3300027695\|Ga0209966_1120237	Not Available	602	Open in IMG/M
3300027722\|Ga0209819_10021228	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2154	Open in IMG/M
3300027876\|Ga0209974_10030883	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	1774	Open in IMG/M
3300027915\|Ga0209069_10184144	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	1057	Open in IMG/M
3300031740\|Ga0307468_100080682	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1852	Open in IMG/M
(restricted) 3300031825\|Ga0255338_1000014	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	771895	Open in IMG/M
3300031854\|Ga0310904_10454553	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	850	Open in IMG/M
3300031892\|Ga0310893_10332262	All Organisms → cellular organisms → Bacteria → Nitrospirae	651	Open in IMG/M
3300031908\|Ga0310900_10100196	All Organisms → cellular organisms → Bacteria → Proteobacteria	1857	Open in IMG/M
3300031944\|Ga0310884_10133568	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1261	Open in IMG/M
3300032000\|Ga0310903_10129934	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1112	Open in IMG/M
3300032003\|Ga0310897_10518651	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	580	Open in IMG/M
3300032075\|Ga0310890_11369931	Not Available	580	Open in IMG/M
3300032174\|Ga0307470_11810029	Not Available	517	Open in IMG/M
3300032179\|Ga0310889_10121348	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1139	Open in IMG/M
3300032180\|Ga0307471_103894635	Not Available	528	Open in IMG/M
3300033433\|Ga0326726_10624570	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1037	Open in IMG/M
3300033480\|Ga0316620_12486786	Not Available	515	Open in IMG/M
3300034257\|Ga0370495_0052234	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1235	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.43%
Host-Associated	Host-Associated	29.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.13%
Plants	Host-Associated → Plants	29.57%
Aquatic	Environmental → Aquatic	11.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.57%
Sediment	Environmental → Aquatic → Sediment	6.09%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Marine	Environmental → Aquatic → Marine	0.87%
Peat	Environmental → Terrestrial → Peat	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.91%
Loam	Environmental → Terrestrial → Soil → Loam	20.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Sand	Environmental → Terrestrial → Soil → Sand	1.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.17%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.87%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031825 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01573370	2088090015	Soil	MTTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLMSCMEHKGYKYVGPDPVRRQQAQ
F14TC_1019911922	3300000559	Soil	MTTKPAFVGKGAMVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPYSQTLTDYNACKMWSTVKYAESEKREEIITDKLGYWIHVPLLKSCMEHKGYKYVGPEAGHPLQPQ*
JGI11643J12802_121395477	3300000890	Soil	MTTKPVFVRRGAVVWWCVVLGMSGCIPVEPLRSSSTYWEAQEVPSSQVITDYNACKIWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGHRLHPQ*
JGI24033J26618_10509612	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	PALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ*
JGI26128J50194_10083111	3300003347	Arabidopsis Thaliana Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKAC
JGI26129J50193_10014172	3300003349	Arabidopsis Thaliana Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ*
JGI26145J50221_10083002	3300003371	Arabidopsis Thaliana Rhizosphere	MTTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLMSCMEHKGYKYVGPDPVRRQQAQ*
Ga0055438_100916562	3300003995	Natural And Restored Wetlands	MATNPAFVRKGTVAWWCVVLGMTGCVPVGPLPSSPTYWEAKEVPSSQVLTDYSVCTKWSTVKYAESEKREEIYTDNLIYWIHIPLLKECMEHKGYKYVG
Ga0063356_1005571052	3300004463	Arabidopsis Thaliana Rhizosphere	MTTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLKSCMEHKGYKYVGPDPVRRQQAQ*
Ga0063356_1011051752	3300004463	Arabidopsis Thaliana Rhizosphere	MTTKAAFAWKGVVGWWCVLLGMSGCISVDSLPSSSAYWEAKEVPYSQVITDYNVCMVWSTVKYAESEKREEIITDNLGYWIHVPLLKECMVHKGYKYVGPEAGHRPPPQ*
Ga0065704_102069892	3300005289	Switchgrass Rhizosphere	MTTKPTFVRKCAAMWCVVLGISGCISVERVPSPSTYWEAKEVPSSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLTECMKRKGYKYVGPEAQPQ*
Ga0065712_100100772	3300005290	Miscanthus Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGHPLQPQ*
Ga0065707_100476482	3300005295	Switchgrass Rhizosphere	VRKCAAMWCVVLGISGCISVERVPSSSTYWEAKEVPSSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLTECMKRKGYKYVGPEAQPQ*
Ga0065707_103033862	3300005295	Switchgrass Rhizosphere	MTMKPAFVRKGAVVWWCVVLGMSGCISVDSLPSSSAYWEAKEVPYSQVITDYNACKIWSTVTYAESEKREEIITDGLGYWIHVPLLKKCMEHKGYKYVGPEAGSRLHPQ*
Ga0068869_1009248302	3300005334	Miscanthus Rhizosphere	MTTKSAFVLRRAVTWWGVLWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRLHPQ*
Ga0068868_1001769202	3300005338	Miscanthus Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMEHKGYKYVGPEAGGRLHPQ*
Ga0070689_1004372851	3300005340	Switchgrass Rhizosphere	MTTKPACVRKGAVIWWCVVVGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHPQ*
Ga0070687_1001357011	3300005343	Switchgrass Rhizosphere	MTTKSAFVLRRAVTWWGVLWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGGRLHPQ*
Ga0070673_1018020802	3300005364	Switchgrass Rhizosphere	MTTKSAFVLRRAVTWWGVLWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVG
Ga0070703_101695982	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVRKGVVVWWGVLLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRLHPQ*
Ga0070709_115612602	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	CVVLGMPGCISVEPVPSSATYWEAKEVPHSQALTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0070711_1001198912	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVGKGAMVWCCVVLGMPGCISVEPVPSSATYWEAKEVHSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0070711_1010830181	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFLRKRAVMWWCVVLGMSGCISVEPVPSSSTYWEAKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMKHKGYKYVGPEAGHSPQPQ*
Ga0070705_1002036702	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAGLRKAAVVGWGVLLGMSGCTSLEPLPSSSAYWGAKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLRECMEHKGYKYVGPEAGSQVHPQ*
Ga0070705_1005586412	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VLKGAVIWWGVLLGMSGCTSLDPLPSSSAYWEAKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRLHPQ*
Ga0070708_1016303632	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ*
Ga0070698_1010249952	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	CVVLGMSGCISVDSLPSSSAYWEAKEVPYSQVITDYNACKIWSTVTYAESEKREEIITDGLGYWIHVPLLKKCMEHKGYKYVGPEAGSRLHPQ*
Ga0070697_1017271302	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVRKGVVVWWGVLLGMSGCISVDSLPSSTAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRL
Ga0070697_1019178051	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVRKGAVVWWCVVLGMAGCVSVEPVPSSPTYWEAKEVPYSQVLTYFSACKTGSTVKYAESKKREEIITDNLGYWIHVPLLRECMEHKGYKYVGPEAGS
Ga0070695_1000324351	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKHAFVRKGVVVWWGVLLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRLHPQ*
Ga0070704_1001304872	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPSFVRKGAVVWWGVLLGMSGCISVDSLPSSSTYWEAKEVPNSQVITDYNACKIWSTVKYAESEKREKIITDNLGFWIHVPLLKECMEHKGYKYIGPEAGDRLPPQ*
Ga0068859_1013897392	3300005617	Switchgrass Rhizosphere	WWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ*
Ga0074472_109309978	3300005833	Sediment (Intertidal)	MTTKPAIVRTGAVVWWGVLLGMSGCISVDSLPSSSTYWEAKEVLTSQVITDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYTYVGPEAGRRVHPQ*
Ga0075417_103551122	3300006049	Populus Rhizosphere	MTTKPVFVRKGAVMGWCVVLGMSGCISVQPVPSSATYWEAKEVASSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEVGQRPQPQ*
Ga0075028_1009271361	3300006050	Watersheds	MTTKPVFIRKGAVVWCGVLLGMSGCTSLEPLPSSSAYWEAKGVPNSQVITDYNACKIWSTVKYAESEKREEIITDRLGYWIHLPLLKECMEHKGYTYVGPEAGSQLHPQ*
Ga0075026_1005978121	3300006057	Watersheds	MTTILAFVRKGAVVWGGVLLGMSGCISVDSLPSSSTYWEAKEVPTSQVITDYSACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYTYVGPEAERRSHPQ*
Ga0070715_102040322	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVRKGAVIWWCVVLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHP*
Ga0070716_1001582222	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVGKGAMVWCCVVLGMPGCISVEPVPSSATYWEAKEVHSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQPQ*
Ga0070716_1014431491	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IMTTKPAFLRKRAVMWWCVVLGMSGCISVEPVPSSSTYWEAKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMKHKGYKYVGPEAGHSPQPQ*
Ga0075014_1001271282	3300006174	Watersheds	MTTKPACVRKGAVIWWCVGLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESEKREELITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHPQ*
Ga0075014_1007518762	3300006174	Watersheds	MTTKPAFGRKGAVVWWCVLLGMSGCMSVEPVPSSSTYWEAKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDNLGFWIHVPLLKECMKHKGYKYVGPETGHSLQSQ*
Ga0075425_1025537112	3300006854	Populus Rhizosphere	CDNYGERVGGEIMTTKPAFVRTGAVVWWCVVWGMSGCTSIPIPVKPVPSSSTYWEAKEVPSSQVLTDYNACKMWSAVKYAESEKREEIITDNLGYWIHVRLLKECMKHKGYKYIGPETGHSPQPQ*
Ga0075424_1006085271	3300006904	Populus Rhizosphere	MTTKPACVRKGAVIWWCVVVGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGHPLQPQ*
Ga0075424_1012525512	3300006904	Populus Rhizosphere	MTTKPVFVRKGAVVWWCVVFGMTGCISVEPVPSSSTYWEAKDVPYSQVITDYNACKMWSSVKYAESEKREEIITDNLGYWIHVRLLKECMKHKGYKYIGPETGHSSQPQ*
Ga0105092_104034782	3300009157	Freshwater Sediment	MTTKPAFVRKCAAMWCVVLGISGCISVERVPSSSTYWEAKEVASSQVLTDYNACKMWSTVKYAESEKREEIITDNWGYWIHVPLLKECMKRKGYKYVGPEAQPQ*
Ga0075423_100468954	3300009162	Populus Rhizosphere	MSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHPQ*
Ga0105104_102273081	3300009168	Freshwater Sediment	FVRKCAAMWCVVLGISGCISVERVPSSSTYWEAKEVPSSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMKRKGYKYVGPEAQPQ*
Ga0105078_10406621	3300009823	Groundwater Sand	MSGCISVEPVPSSSTYWEAKEVPSSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMKRKGYKYVGPEAGHSLQPQ*
Ga0134125_102354993	3300010371	Terrestrial Soil	MSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKTCMEHKGYKYVGPEAGHPLQPQ*
Ga0134127_109329102	3300010399	Terrestrial Soil	GARVGGEIMTTKSAFVLRRAVTWWGVLWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGGRLHPQ*
Ga0134122_108368792	3300010400	Terrestrial Soil	MTTKPVFVRKGAVIWWCVLLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESEKREEIITDGLGYWIHVPLLKECMGHKGYKYVGPEAGSRLHPQ*
Ga0134122_110904342	3300010400	Terrestrial Soil	MTTRSAFILKRAVTWWGILWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRSHPQ*
Ga0134121_101669262	3300010401	Terrestrial Soil	MTTKPAFVRKGVVVWWGVLLGMSGCISVDSLPSSTAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRLHPQ*
Ga0134121_101702162	3300010401	Terrestrial Soil	MSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGNRLHPQ*
Ga0157300_10050111	3300012884	Soil	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREDIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ*
Ga0157282_100289661	3300012904	Soil	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMERKGYKYVGPEVGRRPQPQ*
Ga0153915_110673942	3300012931	Freshwater Wetlands	MTTNPAFVRKGAVVWWCVVLGMSGCIPVEYVPSSSTYWEAKEVPYSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVHFLKEC
Ga0153915_112676412	3300012931	Freshwater Wetlands	MTTKPACVRKGAVVWWCVVLGMSGCIPVEPVPSSPTYWEAKEVPFSQVMTDYSACTRWSTVKYAESEKREEIYTDNLIYWIHVPLLKECMEHKGYKYVGPEAEPSLRPQ*
Ga0164300_100262822	3300012951	Soil	MTTKPAFVGKGAMVWCCVVLGMPGCISVEPVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESQKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0164298_102980511	3300012955	Soil	MTTKPALVRKAAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGRRLPPQ*
Ga0164303_104274901	3300012957	Soil	MTTKPVFVWKGAMVWWCVVLGMPGCISVEPVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0164301_114439591	3300012960	Soil	IVLGMPGCISVEPVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESQKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0164302_103798822	3300012961	Soil	SVEPVPSSATYWEAKEVHSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0164304_101414481	3300012986	Soil	PALVRKGAAVCWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKTCMEHKGYKYVGPEAGHPLQPQ*
Ga0164306_105979622	3300012988	Soil	MTTKPVFVWKGAMVWWCVVLGMPGCISVEPVPSSATYWEAKEVPSSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ*
Ga0164305_122687292	3300012989	Soil	MTTKPVFVRKGAVVWWGVLLVMSGCASLEPLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVR
Ga0157374_107523321	3300013296	Miscanthus Rhizosphere	MSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGHPLQPQ*
Ga0157378_103987372	3300013297	Miscanthus Rhizosphere	MTTKSAFVLRRAVTWWGVLRGMSGCTSLEPLPSSPAYWEGKAVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGGRLHPQ*
Ga0163162_105380242	3300013306	Switchgrass Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPETGHPLQPQ*
Ga0157380_100274701	3300014326	Switchgrass Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGGRLHPQ*
Ga0157379_107123601	3300014968	Switchgrass Rhizosphere	MTTKPACVRKGAVIWWCVVVGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMEHKGYKYVGPEAGSRLHPQ*
Ga0132258_131792532	3300015371	Arabidopsis Rhizosphere	MTTKPAFVGKGAMVWWCVVLGMSGCISVEPVPSSATYWEAKEVPHSQALTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEVGPRLQLQ*
Ga0132258_131890932	3300015371	Arabidopsis Rhizosphere	MQMKELKDGMTTELANVRKAAGVWCVVLGMSGCIPVEPVPSSATYWEAKEVAYSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHIPLLKACMEHKGYKYVGPEAGHRLHPQ*
Ga0132257_1031318702	3300015373	Arabidopsis Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGSRLHPQ*
Ga0184611_10686322	3300018067	Groundwater Sediment	MTTKRAFVGKGAMVWWCAVLGMPGCISVEPVPSSATYWEAKEVPHSQALTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMERKGYKYVGPEAGHRPQPQ
Ga0173481_100000986	3300019356	Soil	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0173482_100050183	3300019361	Soil	MTTKPALVRKGAAVWWCVVLGMPGCISVEPVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0173479_100187083	3300019362	Soil	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESDKKEEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0193723_10479311	3300019879	Soil	MTTTPAFVRKGAGVWWCIVLGMSGCMSVEPVPSSSTYWEAKEVPYSQVITDYSACKMWSTVKYAESEKREEIITDNLGYWIHTPLLKVCMEHKGYKYVGPEAEHSLHPK
Ga0247747_10406081	3300022737	Soil	ALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0247785_10468301	3300022889	Soil	LGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMERKGYKYVGPEVGRRPQPQ
Ga0247744_10413071	3300023073	Soil	VVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0207697_101397631	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGHPLQPQ
Ga0207684_105948011	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVRKGVVVWWGVLLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYKYVGPEAGHGLQP
Ga0207663_108668181	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTRKPAFVGKGAMVWCCVVLGMPGCISVEPVPSSATYWEAKEVHSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ
Ga0207662_101186921	3300025918	Switchgrass Rhizosphere	MTTKSAFVLRRAVTWWGVLWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHPQ
Ga0207646_110951432	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVRKGVVVWWGVLLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWLHVPLLKECMVHKGYKYVGPEAGSRLHPQ
Ga0207687_102239551	3300025927	Miscanthus Rhizosphere	MTTKSAFVLRRAVTWWGVLWGMSGCTSLEPLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESENREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGGRLHPQ
Ga0207670_108895141	3300025936	Switchgrass Rhizosphere	MTTKPACVRKGAVIWWCVVVGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHPQ
Ga0207665_101347832	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKPAFVGKGAMVWCCVVLGMPGCISVEPVPSSATYWEAKEVHSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQPQ
Ga0207702_113087782	3300026078	Corn Rhizosphere	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGHPLQPQ
Ga0207538_10060992	3300027122	Soil	CVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0209973_10238781	3300027252	Arabidopsis Thaliana Rhizosphere	SGGQIMTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0209981_10265112	3300027378	Arabidopsis Thaliana Rhizosphere	MTTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLKSCMEHKGYKYVGPDPVRRQQAQ
Ga0209995_10049372	3300027471	Arabidopsis Thaliana Rhizosphere	MTTTPAFVRKGAVVWWCVVMGMAGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLKSCMEHKGYKYVGPDPVRRQQAQ
Ga0210002_10505432	3300027617	Arabidopsis Thaliana Rhizosphere	TTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLMSCMEHKGYKYVGPDPVRRQQAQ
Ga0209966_11202371	3300027695	Arabidopsis Thaliana Rhizosphere	MTTKAAFAWKGVVGWWCVLLGMSGCISVDSLPSSSAYWEAKEVPYSQVITDYNVCMVWSTVKYAESEKREEIITDNLGYWIHVPLLKECMVHKGYKY
Ga0209819_100212283	3300027722	Freshwater Sediment	MTTKPAFVRKCAAMWCVVLGISGCISVERVPSSSTYWEAKEVASSQVLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPEAGHRLQPQ
Ga0209974_100308831	3300027876	Arabidopsis Thaliana Rhizosphere	MTTKLVYVRKAAVAWCVVLGMSGCIPVERVPSSATYWEAKEVPYSQALTDYNACKMWSAVKYAESEKREEIITDNLGYWIHVPLLKACMEHKGYKYVGPETGHRLQP
Ga0209069_101841441	3300027915	Watersheds	MTTKPACVRKGAVIWWCVGLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHP
Ga0307468_1000806822	3300031740	Hardwood Forest Soil	MTTKPVFVRKGAVIWWCVLLGMSGCISVDSLPSSSAYWERKEVPYSQVITDYNACKIWSTVKYAESEKREEIITDGLGYWIHVPLLKECMGHKGYKYVGPEAGSRLHPQ
(restricted) Ga0255338_1000014584	3300031825	Sandy Soil	MTTKPAFVRKGAVLWGVVLGMSGCVSVEPLPSSPTYWEAKEVPAAQVLTDYSACTKWSTVKYAESEKREEIYTDNLIYWIHIPLLKTCMEHKGYKYVGPEASPGLRSQ
Ga0310904_104545532	3300031854	Soil	MMTKAAFAWKGVVGWWCVLLGMSGCISVDSLPSSSAYWEAKEVPYAQVITDYNVCKIWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYTYIGPEAGHRPPPQ
Ga0310893_103322622	3300031892	Soil	MTTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLKSCMEHKGYKYV
Ga0310900_101001961	3300031908	Soil	MTTTPAFVRKGAVVWWCVVMGMSGCVSVEPVPSSATYWEAKEVPASQVLTDYNACKLWSAVKYAESEKREEIITDNLGYWIHIPLLMSCMEHKGYKYVGPDP
Ga0310884_101335682	3300031944	Soil	MTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ
Ga0310903_101299342	3300032000	Soil	LGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREVIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0310897_105186512	3300032003	Soil	CVLLGMSGCISVDSLPSSSAYWEAKEVPYAQVITDYNVCKIWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYTYIGPEAGHRPPPQ
Ga0310890_113699312	3300032075	Soil	EIMTTKPAFVGKGAMVWCCVVLGMPGCISVEPVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESQKREEIITDNLGYWIHVPLLKSCMEHKGYKYVGPEAGYRLQLQ
Ga0307470_118100292	3300032174	Hardwood Forest Soil	MTTKPTFFRKGAVIWWGVLWGMSGCTSLEPIPSSSTYWEAKEVAYSQVITDYNACKMWSTVKYAESEKREEIITDGLGYWIHVPLLKECMEHKGYKYVGPEAGSRLHPQ
Ga0310889_101213482	3300032179	Soil	QIMTTKPALVRKGAAVWWCVVLGMSGCISVERVPSSATYWEAKEVPSSQTLTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKACMERKGYKYVGPEVGRRPQPQ
Ga0307471_1038946351	3300032180	Hardwood Forest Soil	MTTKRAFVGKGAMVWWCAVLGMSGCISVEPVPSSATYWEAKEVPHSQALTDYNACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYKYIGPEAGSQVHPQ
Ga0326726_106245702	3300033433	Peat Soil	SGCISVDSLPSSSTYWEAKEVPTSQVITDYSACKMWSTVKYAESEKREEIITDNLGYWIHVPLLKECMEHKGYTYVGPEAEHRSHPQ
Ga0316620_124867861	3300033480	Soil	MTTKPAFVRKGAVVWWCVVLGMSGCIPVEPVPSSPTYWEAKQVPYTQVLTDYSVCTRWSTVKYAESEKREEIYTDNLIYWIHIPLLKECMEHKGYKYVGPEAEPSLRPQ
Ga0370495_0052234_503_769	3300034257	Untreated Peat Soil	MSGCISVDPLPSSSTYWEAKEVPTSQVITDYSACKMWSTVKYAASEKREEIITDNLGYWIHVPLLKECMEHKGYTYVGPEAERRLHPQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters