Metagenome / Metatranscriptome Family F080552

Basic Information
Family ID	F080552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	63 residues
Representative Sequence	VRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK
Number of Associated Samples	100
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.80 %
% of genes near scaffold ends (potentially truncated)	33.91 %
% of genes from short scaffolds (< 2000 bps)	85.22 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (86.957 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.304 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.478 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.55% β-sheet: 0.00% Coil/Unstructured: 40.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01425	Amidase	60.87
PF13561	adh_short_C2	19.13
PF00106	adh_short	7.83
PF00351	Biopterin_H	2.61
PF07883	Cupin_2	1.74
PF01329	Pterin_4a	1.74
PF08530	PepX_C	1.74
PF02900	LigB	0.87
PF00189	Ribosomal_S3_C	0.87
PF01751	Toprim	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	60.87
COG3186	Phenylalanine-4-hydroxylase	Amino acid transport and metabolism [E]	2.61
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	1.74
COG2936	Predicted acyl esterase	General function prediction only [R]	1.74
COG0092	Ribosomal protein S3	Translation, ribosomal structure and biogenesis [J]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.13 %
Unclassified	root	N/A	13.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	40.87 %
Unclassified	root	N/A	13.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02IS3LU	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105832804	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300001305\|C688J14111_10268462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	537	Open in IMG/M
3300001686\|C688J18823_10468869	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300002568\|C688J35102_118121643	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300002568\|C688J35102_118853394	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300004114\|Ga0062593_101751056	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300004153\|Ga0063455_100267215	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300004157\|Ga0062590_100347926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300004157\|Ga0062590_102481999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	549	Open in IMG/M
3300004479\|Ga0062595_100140604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1382	Open in IMG/M
3300005294\|Ga0065705_10230960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1273	Open in IMG/M
3300005328\|Ga0070676_10941665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	645	Open in IMG/M
3300005332\|Ga0066388_102754726	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005332\|Ga0066388_105100106	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005354\|Ga0070675_100662286	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300005354\|Ga0070675_101116169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	725	Open in IMG/M
3300005526\|Ga0073909_10026649	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300005549\|Ga0070704_101869207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	556	Open in IMG/M
3300005617\|Ga0068859_101446952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	758	Open in IMG/M
3300005713\|Ga0066905_102199568	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005764\|Ga0066903_100649771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1844	Open in IMG/M
3300005841\|Ga0068863_101428300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	700	Open in IMG/M
3300006049\|Ga0075417_10014424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3030	Open in IMG/M
3300006163\|Ga0070715_10448805	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300006175\|Ga0070712_100842788	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300006196\|Ga0075422_10137804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	966	Open in IMG/M
3300006577\|Ga0074050_11746861	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006580\|Ga0074049_12802382	Not Available	855	Open in IMG/M
3300006604\|Ga0074060_11953177	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300006605\|Ga0074057_12199245	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300006606\|Ga0074062_12995904	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006755\|Ga0079222_10183110	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300006845\|Ga0075421_101755161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	669	Open in IMG/M
3300006846\|Ga0075430_100862507	Not Available	746	Open in IMG/M
3300006854\|Ga0075425_101048218	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M
3300006871\|Ga0075434_100127512	All Organisms → cellular organisms → Bacteria → Proteobacteria	2562	Open in IMG/M
3300006954\|Ga0079219_10700254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300009094\|Ga0111539_10026652	All Organisms → cellular organisms → Bacteria → Proteobacteria	7065	Open in IMG/M
3300009094\|Ga0111539_10186124	All Organisms → cellular organisms → Bacteria → Proteobacteria	2425	Open in IMG/M
3300009094\|Ga0111539_10334227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1764	Open in IMG/M
3300009094\|Ga0111539_12657233	Not Available	580	Open in IMG/M
3300009100\|Ga0075418_12112553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	614	Open in IMG/M
3300009162\|Ga0075423_11410790	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300009545\|Ga0105237_12045245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	582	Open in IMG/M
3300009553\|Ga0105249_11284971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	803	Open in IMG/M
3300009609\|Ga0105347_1056081	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300009610\|Ga0105340_1047434	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300010046\|Ga0126384_10261889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300010360\|Ga0126372_12446844	Not Available	573	Open in IMG/M
3300010373\|Ga0134128_11925185	Not Available	651	Open in IMG/M
3300010397\|Ga0134124_10009058	All Organisms → cellular organisms → Bacteria	8024	Open in IMG/M
3300010400\|Ga0134122_10042197	All Organisms → cellular organisms → Bacteria → Proteobacteria	3483	Open in IMG/M
3300011107\|Ga0151490_1407154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	691	Open in IMG/M
3300011417\|Ga0137326_1015702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1647	Open in IMG/M
3300011434\|Ga0137464_1022056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1704	Open in IMG/M
3300011442\|Ga0137437_1106017	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300012142\|Ga0137343_1047317	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300012159\|Ga0137344_1051001	Not Available	735	Open in IMG/M
3300012212\|Ga0150985_105326090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300012212\|Ga0150985_110650206	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300012212\|Ga0150985_119566565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300012212\|Ga0150985_121183253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	806	Open in IMG/M
3300012469\|Ga0150984_101982864	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012469\|Ga0150984_103664317	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300012922\|Ga0137394_10059618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3162	Open in IMG/M
3300012948\|Ga0126375_11458087	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012958\|Ga0164299_10063302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1784	Open in IMG/M
3300012986\|Ga0164304_10773010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	738	Open in IMG/M
3300012987\|Ga0164307_10933257	Not Available	701	Open in IMG/M
3300014745\|Ga0157377_10259918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1129	Open in IMG/M
3300014968\|Ga0157379_10163954	All Organisms → cellular organisms → Bacteria → Proteobacteria	2006	Open in IMG/M
3300015371\|Ga0132258_12082722	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300015373\|Ga0132257_101599614	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300017792\|Ga0163161_10352850	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300018083\|Ga0184628_10007570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5216	Open in IMG/M
3300024181\|Ga0247693_1021427	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300024224\|Ga0247673_1025970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	793	Open in IMG/M
3300024317\|Ga0247660_1026514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	923	Open in IMG/M
3300025905\|Ga0207685_10478727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	652	Open in IMG/M
3300025918\|Ga0207662_11040538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300025926\|Ga0207659_11007922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	717	Open in IMG/M
3300025930\|Ga0207701_11608422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	523	Open in IMG/M
3300025949\|Ga0207667_11052791	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300025961\|Ga0207712_10838730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	810	Open in IMG/M
3300025961\|Ga0207712_11675302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	570	Open in IMG/M
3300026088\|Ga0207641_10642251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1042	Open in IMG/M
3300026121\|Ga0207683_11116234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	731	Open in IMG/M
3300027513\|Ga0208685_1097453	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027523\|Ga0208890_1089698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	510	Open in IMG/M
3300027533\|Ga0208185_1024867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1479	Open in IMG/M
3300027787\|Ga0209074_10245298	Not Available	693	Open in IMG/M
3300027821\|Ga0209811_10007381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3522	Open in IMG/M
3300027873\|Ga0209814_10142849	Not Available	1025	Open in IMG/M
3300028072\|Ga0247675_1035291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	732	Open in IMG/M
3300028381\|Ga0268264_12472332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	525	Open in IMG/M
3300028381\|Ga0268264_12673150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	503	Open in IMG/M
3300028792\|Ga0307504_10029293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	1444	Open in IMG/M
3300031152\|Ga0307501_10231092	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031198\|Ga0307500_10001466	All Organisms → cellular organisms → Bacteria → Proteobacteria	6632	Open in IMG/M
3300031740\|Ga0307468_100994477	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300031740\|Ga0307468_102231069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	530	Open in IMG/M
3300031820\|Ga0307473_10577425	Not Available	772	Open in IMG/M
3300032000\|Ga0310903_10580762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	594	Open in IMG/M
3300032179\|Ga0310889_10719551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	522	Open in IMG/M
3300032180\|Ga0307471_100388125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300032180\|Ga0307471_103142986	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300034149\|Ga0364929_0003322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4010	Open in IMG/M
3300034817\|Ga0373948_0028438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1113	Open in IMG/M
3300034818\|Ga0373950_0031120	Not Available	988	Open in IMG/M
3300034819\|Ga0373958_0204412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.61%
Host-Associated	Host-Associated	37.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.91%
Plants	Host-Associated → Plants	37.39%
Aquatic	Environmental → Aquatic	8.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.17%
Sediment	Environmental → Aquatic → Sediment	8.70%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.39%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.22%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.22%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.30%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	2.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_01673670	2065487018	Soil	LLPQGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK
INPhiseqgaiiFebDRAFT_1058328042	3300000364	Soil	LLPQGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPP*
C688J14111_102684621	3300001305	Soil	LIIGGILAVVVAYFLPEQETLIKRNAGSEELRDTVGVVGPWVKDLKDLKELKELKDLRK*
C688J18823_104688692	3300001686	Soil	LLPEGVRSSFIAVLIIGAILAAVAAYFLPDQETLIKRNAGSEELRETAGVVGPWVKDLKELKDLKDLKDLRK*
C688J35102_1181216431	3300002568	Soil	MRSSFIAVLIIGGILAVVVAYFLPEQETLIKRNAGSEELRDTVGVVGPWVKDLKDLKELKELKDLRK*
C688J35102_1188533942	3300002568	Soil	VRSSFIAVLIIGAILAAVAAYFLPDQETLIKRNAGSEELRETVGVVGPWVKDFKDLKDLKELKELRK*
Ga0062593_1017510562	3300004114	Soil	MRSPIIVGLIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0063455_1002672152	3300004153	Soil	MRSSLIAVLVIGAILAAVAAYFLPERETTITRNAAAEEIRETVGVVSPWVTELRDLREFKGLKELRK*
Ga0062590_1003479262	3300004157	Soil	VRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0062590_1024819992	3300004157	Soil	IIVGLIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0062595_1001406042	3300004479	Soil	VRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK*
Ga0065705_102309601	3300005294	Switchgrass Rhizosphere	MRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEDIRETIGAVKPLVKEFKDFKELQK*
Ga0070676_109416651	3300005328	Miscanthus Rhizosphere	LLPQGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0066388_1027547262	3300005332	Tropical Forest Soil	VRSPLIIGLVIGAVLAALAAYFLPERETTITRDVRAEEIRRNVDFARPFIKELKDFKEVQK*
Ga0066388_1051001062	3300005332	Tropical Forest Soil	VRSPLIIGLTIGAVLAAIAAYFLPDEETTITRDARAEEVRRTISVVRPFVNELKDFKELNK*
Ga0070680_1000022671	3300005336	Corn Rhizosphere	AAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0070675_1006622862	3300005354	Miscanthus Rhizosphere	VSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0070675_1011161692	3300005354	Miscanthus Rhizosphere	PAHALLSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK*
Ga0073909_100266493	3300005526	Surface Soil	MRSSILVGLVIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDLKELKK*
Ga0070704_1018692071	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK*
Ga0068859_1014469521	3300005617	Switchgrass Rhizosphere	IGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK*
Ga0066905_1021995682	3300005713	Tropical Forest Soil	VRSSVIVVLIIAAALAALAAYFLPEPETTITRDVRTEELRRTVTFVTPFVKDLKDFKEIRK*
Ga0066903_1006497714	3300005764	Tropical Forest Soil	MPCWPQGVRSPIIVGLIIGAVLAAITAYFLPERETITRDVRAEELRRTISVVRPFVRELKDFKELKK*
Ga0068863_1014283002	3300005841	Switchgrass Rhizosphere	IVGLIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0075417_100144245	3300006049	Populus Rhizosphere	VRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQR*
Ga0070715_104488052	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VRSPFIAGLIIGAVAAAIAVYFLPERETTITRDVRTEEIRGNVELARPFVKELKDFKEVQK*
Ga0070712_1008427882	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRSPFIVGLIIGAVLAALVVYFLPTRETTITRDVRTEEIRGNVELARPFVKELKDFKEVQK*
Ga0075422_101378042	3300006196	Populus Rhizosphere	IIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQR*
Ga0074050_117468611	3300006577	Soil	MRSSILVGLVIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDLKE
Ga0074049_128023822	3300006580	Soil	LLLQGVRSSIIVGLVIGAMLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0074060_119531772	3300006604	Soil	LLPQGMRSSIIVGLIIGAALVAIAAYFLPGEETVITRGAASEEIRESVGVVSPWVKELKDFKDLKELRK*
Ga0074057_121992452	3300006605	Soil	LLLQGVRSSIIVGLVIGAMLVAIAAYFLPERETVITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0074062_129959042	3300006606	Soil	MRSSILVGLVIGAVLVAVAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDLKELKK*
Ga0079222_101831103	3300006755	Agricultural Soil	VRSPFIVGLIIGAVAAAIAVYFLPERFLPERETTITRDVRTEEIRRNVEFATPFVKELKDFKEVQK*
Ga0075421_1017551612	3300006845	Populus Rhizosphere	VRSSVITVLIIGAVLAALAAYFLPAQETAITRDARAEELRESVGVVSPYVKELKDLKDFQDLRK*
Ga0075430_1008625071	3300006846	Populus Rhizosphere	VRLSIIVGLLIGAVLAAVAAYFLPERETAITRDVVTEEIRQSVGVVGPMVKELKDLKELKDLNK*
Ga0075425_1010482182	3300006854	Populus Rhizosphere	VRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKDLKDFKELQK*
Ga0075434_1001275123	3300006871	Populus Rhizosphere	VRSSILLGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKDLKDFKELQK*
Ga0079219_107002542	3300006954	Agricultural Soil	LLSQGVRSPFIVGLIIGAVAAAIAVYFLPERFLPERETTITRDVRTEEIRRNVEFATPFVKELKDFKEVQK*
Ga0105240_107433471	3300009093	Corn Rhizosphere	AYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0111539_100266522	3300009094	Populus Rhizosphere	LLPQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQR*
Ga0111539_101861242	3300009094	Populus Rhizosphere	LLSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK*
Ga0111539_103342272	3300009094	Populus Rhizosphere	LLPQGVRSSILLGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVNELKDFKELQR*
Ga0111539_126572332	3300009094	Populus Rhizosphere	MRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEDIRETIGAVKPLVKEFKDF
Ga0075418_121125532	3300009100	Populus Rhizosphere	LPQGMRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEDIRETIGAVKPLVKEFKDFKELQK*
Ga0075423_114107902	3300009162	Populus Rhizosphere	LLLQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKDLKDFKELQK*
Ga0105237_120452452	3300009545	Corn Rhizosphere	IAVLVVGAILAAVAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0105249_112849712	3300009553	Switchgrass Rhizosphere	LSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK*
Ga0105347_10560812	3300009609	Soil	LSITIGLLIGAVLVAVVAYFLPERETAITRDAATEEVRQTVGVVAPMMKELKDLKVLNDLKK*
Ga0105340_10474344	3300009610	Soil	MRLWVLIGLLVGAVLVGSAAYFLPERGTVITRDVVSEEIREKVNLVRPWVNELKDLKELQK*
Ga0126384_102618892	3300010046	Tropical Forest Soil	LLPQGVRSPLIIGLVIGAVLAALAAYFLPERETEITRDVRSEEVRRTISFVRPFVNELKDFKELQK*
Ga0126372_124468441	3300010360	Tropical Forest Soil	VRSPFIVGLIIGVVAAAIAAYFLPERETTITRDVRTEEVRRNVEFARPFVRELK
Ga0134128_119251851	3300010373	Terrestrial Soil	VRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIRGNVELARPFVKELKDFKEVQK*
Ga0134124_100090589	3300010397	Terrestrial Soil	LLLQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQK*
Ga0134122_100421972	3300010400	Terrestrial Soil	MRSPIIIGMIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0151490_14071541	3300011107	Soil	VGLIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0137326_10157022	3300011417	Soil	LSITLGLLIGAVLVAVVAYFLPERETAITRDAATEEVRQTVGVVAPMMKELKDLKVLNDLKK*
Ga0137464_10220562	3300011434	Soil	MGLWVLIGLLVGAVLVGVAAFFLPERETVITRDVVAEEIREKVNLVRPWVNELKDLKELQK*
Ga0137437_11060172	3300011442	Soil	MRSSILVGLIIGAVLVAIAAYFLPERETVITRDSAAEEIRETVGAAKPLVKELKDFKELKK*
Ga0137343_10473172	3300012142	Soil	LSITIGLLIGAVLVAVVAYFLPERETAITRDEATEEVRQTVGVVAPMMKELKDLKVLNDLKK*
Ga0137344_10510011	3300012159	Soil	MRLWVLIGLLVGAVLVGSAAYFLPERGTVITRDVVSEEIREKVNLVRPWV
Ga0150985_1053260902	3300012212	Avena Fatua Rhizosphere	IIGAIVAAISVYFLPEQETEITRSAASEEIRETVSVVSPWVKDFKDFKELKELRK*
Ga0150985_1106502062	3300012212	Avena Fatua Rhizosphere	LLPEGVRSSFIAVLIIGAILAAVAAYFLPDQETLIKRNAGSEELRETAGVVGPWVKDLKELKDLKDLTDLRK*
Ga0150985_1195665652	3300012212	Avena Fatua Rhizosphere	ELIRPAHALLPQGMRSSFIAVLLIGAILAAVAAYFLPEQETVIKRSAGTEEIRETVGVVSPWVKDLKDLKELKELRK*
Ga0150985_1211832532	3300012212	Avena Fatua Rhizosphere	LLPQGVHSSLIAVLIIGAILAAMAAYFLPERETEITRSAASQEIRETVGVVSPWVKDLKDLKDLKELKELRK*
Ga0150984_1019828642	3300012469	Avena Fatua Rhizosphere	LLPEGVRSSFIAVLIIGAILAAVAAYFLPDQETLIKRNAGSEELRETAGVVGPWVKELKDLKDLKDLRK*
Ga0150984_1036643172	3300012469	Avena Fatua Rhizosphere	MRSSFIAVLLIGAILAAVAAYFLPEQETVIKRSAGSEEIRETVGVVSPWVKDLKDLKELKELRK*
Ga0157352_10701881	3300012519	Unplanted Soil	LLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQR*
Ga0137394_100596185	3300012922	Vadose Zone Soil	MRSSLIAVLIIGAILAAVAAYFLPEQETTITRSAATEEIRETVGVVSPWVRELKDFKDLKELRK*
Ga0126375_114580872	3300012948	Tropical Forest Soil	VRSPLIVGLIIGAVLAAIAAYFLTERETEITRDVRTEEIRRTLSFVRPFVRELKDFKEIQK*
Ga0164299_100633023	3300012958	Soil	GLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0164304_107730102	3300012986	Soil	MRSSILVGLVIGAVLVAIAAYFLPERETLITRDSAAEEIRETMGAVKPLVKELKDFKELKK*
Ga0164307_109332572	3300012987	Soil	MRSSILVGLVIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK*
Ga0157377_102599182	3300014745	Miscanthus Rhizosphere	AVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0157379_101639543	3300014968	Switchgrass Rhizosphere	QGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK*
Ga0132258_120827222	3300015371	Arabidopsis Rhizosphere	LLSQGVRSPFIAGLIIGAVAAAIAAYFLPERETAITRDVRTEEIRRNVEFARPFVKELKDFKEVQK*
Ga0132257_1015996142	3300015373	Arabidopsis Rhizosphere	LLRQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQK*
Ga0163161_103528502	3300017792	Switchgrass Rhizosphere	VRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKSLVRELKDFKELQ
Ga0184628_100075706	3300018083	Groundwater Sediment	MRSSILVGLIIGAVLVAIAAYFLPERETVITRDSAAEEIRETVGAAKPLVKELKDFKELK
Ga0247693_10214272	3300024181	Soil	VRSPFIVGLIIGAVAAAIAVYFLPERETTITRDVRTEEIRRNVEFARPFVKELKDFKEVQ
Ga0247673_10259701	3300024224	Soil	ALLSQGVRSPFIVGLIIGAVAAAIAVYFLPERETTITRDVRTEEIRRNVEFARPFVKELKDFKEVQK
Ga0247660_10265141	3300024317	Soil	QGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK
Ga0207685_104787271	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PLLSQGVRSPFIVGLIIGAVLAALVVYFLPTRETTITRDVRTEEIRGNVELARPFVKELKDFKEVQK
Ga0207662_110405382	3300025918	Switchgrass Rhizosphere	VRSPFIVGLIVGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK
Ga0207659_110079221	3300025926	Miscanthus Rhizosphere	PAHALLSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK
Ga0207701_116084221	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ELIHPAHALLSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK
Ga0207667_110527912	3300025949	Corn Rhizosphere	LLSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK
Ga0207712_108387302	3300025961	Switchgrass Rhizosphere	LPQGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK
Ga0207712_116753022	3300025961	Switchgrass Rhizosphere	LSQGVRSPFIVGLIIGAVLAALVAYFLPARETTITRDVRTEEIREDVSIVRPWVNELKDLKELKDLRK
Ga0207641_106422511	3300026088	Switchgrass Rhizosphere	RPELTRPAHALLLQGMRSPIIVGLIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK
Ga0207683_111162342	3300026121	Miscanthus Rhizosphere	RALLPQGVRSSIIVGLIIGAVLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK
Ga0208685_10974531	3300027513	Soil	LSITIGLLIGAVLVAVVAYFLPERETAITRDAATEEVRQTVGVVAPMMKELKDLKVLNDLKK
Ga0208890_10896981	3300027523	Soil	IIVGLVIGAMLVAIAAYFLPERETVITRDSAAEEIRETVGAVKPLVKELKDFKELKK
Ga0208185_10248673	3300027533	Soil	MRLWVLIGLLVGAVLVGSAAYFLPERGTVITRDVVSEEIREKVNLVRPWVNELKDLKELQ
Ga0209074_102452981	3300027787	Agricultural Soil	VRSPFIVGLIIGAVAAAIAVYFLPERFLPERETTITRDVRTEEIRRNVEFATPFVKELKDFKEVQK
Ga0209811_100073812	3300027821	Surface Soil	MRSSILVGLVIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDLKELK
Ga0209814_101428492	3300027873	Populus Rhizosphere	VRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQ
Ga0247675_10352912	3300028072	Soil	IHAAHALLSQGVRSPFIVGLIIGAVAAAIAVYFLPERETTITRDVRTEEIRRNVEFARPFVKELKDFKEVQK
Ga0268264_124723322	3300028381	Switchgrass Rhizosphere	AHALLLQGMRSPIIVGLIIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDFKELKK
Ga0268264_126731501	3300028381	Switchgrass Rhizosphere	HALLLQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQK
Ga0307504_100292931	3300028792	Soil	VRSSIIVGLVIGAVLVALAAYFLPERETTITRDAKAEEIRETVGVVKPWVKELKDFKDLKDLKELRK
Ga0307501_102310921	3300031152	Soil	MRSSIIVGLIIGAVLVAFAAYFLPGEETVITRGAANEELRESVGVVSPWVRELKDFKDLKDLKELRK
Ga0307500_100014665	3300031198	Soil	MRSSLVAVLIIGAILAAVAAYFLPERETEITRSAANEEIRENVGVVSPWVKELKDFKDFKDLRK
Ga0307495_102644511	3300031199	Soil	AYFLPGEETVITRGAAGEEIRETVGVVSPWVTELKDLKDLKDLKELRK
Ga0307468_1009944772	3300031740	Hardwood Forest Soil	LLLQGVRSSIIIGLVIGAMLIAIAAYFLPGEETVITRGAASEELRESVGVVSPWVRELKDFKDFKDLKK
Ga0307468_1022310692	3300031740	Hardwood Forest Soil	RPELTRPAHALLRQGMRSSIVVGLIIGALLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQK
Ga0307473_105774252	3300031820	Hardwood Forest Soil	MRSSIVVGLIIGALLVAIAAYFLPERETTITRDAKAEEIRETVIAVKPLVRELKDFKELQ
Ga0310903_105807622	3300032000	Soil	ILVGLVIGAVLVAIAAYFLPERETLITRDSAAEEIRETVGAVKPLVKELKDLKELKK
Ga0310889_107195511	3300032179	Soil	SIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQK
Ga0307471_1003881252	3300032180	Hardwood Forest Soil	MRLSVLVGLLVGAVLVGIAAFFLPERETVITRDAVSEDIREKVNLVKPWVNELKDLKELK
Ga0307471_1031429862	3300032180	Hardwood Forest Soil	LLRQGMRSSIVVGLIIGALLVAIAAYFLPERETTITRDAKAEEIRETVSAVRPLVRELKDFKELQK
Ga0364929_0003322_936_1136	3300034149	Sediment	LLPQGMRSSILVGLIIGAVLVAIAAYFLPERETVITRDSAAEEIRETVGAAKPLVKELKDFKELKK
Ga0373948_0028438_224_424	3300034817	Rhizosphere Soil	LLRQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLVKELKDFKELQK
Ga0373950_0031120_3_167	3300034818	Rhizosphere Soil	LLPQGVRSSIILGLIIGALLVALAAYFLPERETTITRDAKAEEIRETVGAVKPLV
Ga0373958_0204412_282_482	3300034819	Rhizosphere Soil	LLLQGVRSSIILGLIIGAVLVALTAYFLPERETTITRDAKAEDIRETVGAVKPLVKDLKDFKELQK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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