Metagenome / Metatranscriptome Family F080544

Basic Information
Family ID	F080544
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	55 residues
Representative Sequence	VTVFGDTAIATGGFKGKGTDEMGKPFDDNERWTDTWVKMPSGKWQCVASSATPIKM
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.55 %
% of genes near scaffold ends (potentially truncated)	31.30 %
% of genes from short scaffolds (< 2000 bps)	35.65 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Most Common Taxonomy
Group	Unclassified (62.609 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.043 % of family members)
Environment Ontology (ENVO)	Unclassified (23.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.435 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.62% Coil/Unstructured: 52.38%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF14534	DUF4440	6.96
PF00069	Pkinase	3.48
PF08332	CaMKII_AD	2.61
PF00248	Aldo_ket_red	2.61
PF01527	HTH_Tnp_1	1.74
PF02687	FtsX	1.74
PF11533	DUF3225	1.74
PF08818	DUF1801	1.74
PF13620	CarboxypepD_reg	1.74
PF03948	Ribosomal_L9_C	1.74
PF12900	Pyridox_ox_2	0.87
PF00849	PseudoU_synth_2	0.87
PF13795	HupE_UreJ_2	0.87
PF07589	PEP-CTERM	0.87
PF02452	PemK_toxin	0.87
PF13751	DDE_Tnp_1_6	0.87
PF09996	DUF2237	0.87
PF12588	PSDC	0.87
PF01252	Peptidase_A8	0.87
PF02518	HATPase_c	0.87
PF02574	S-methyl_trans	0.87
PF00857	Isochorismatase	0.87
PF13577	SnoaL_4	0.87
PF05724	TPMT	0.87
PF01425	Amidase	0.87
PF00126	HTH_1	0.87
PF07366	SnoaL	0.87
PF13302	Acetyltransf_3	0.87
PF03320	FBPase_glpX	0.87
PF00497	SBP_bac_3	0.87
PF13432	TPR_16	0.87
PF03795	YCII	0.87
PF03551	PadR	0.87
PF07228	SpoIIE	0.87
PF00486	Trans_reg_C	0.87
PF13430	DUF4112	0.87
PF13175	AAA_15	0.87
PF07238	PilZ	0.87
PF07715	Plug	0.87
PF03473	MOSC	0.87
PF04187	Cofac_haem_bdg	0.87
PF08388	GIIM	0.87
PF02954	HTH_8	0.87
PF01850	PIN	0.87
PF01075	Glyco_transf_9	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	13.91
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	2.61
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	1.74
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.74
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.74
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.74
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.87
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.87
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.87
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.87
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.87
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.87
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.87
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.87
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG3016	Putative heme-binding protein PhuW	General function prediction only [R]	0.87
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.87
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.87
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
All Organisms	root	All Organisms	37.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
cellular organisms	root	All Organisms → cellular organisms	37.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.87 %
Caldimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Caldimonas tepidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas → Caldimonas tepidiphila	0.87 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17193369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300004479\|Ga0062595_100075548	All Organisms → cellular organisms → Bacteria → Acidobacteria	1678	Open in IMG/M
3300004479\|Ga0062595_101073799	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300004798\|Ga0058859_10681982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300005179\|Ga0066684_10422933	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300005335\|Ga0070666_10514597	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300005437\|Ga0070710_10616731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300005468\|Ga0070707_100581353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1082	Open in IMG/M
3300005468\|Ga0070707_100742769	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300005542\|Ga0070732_10728362	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300006358\|Ga0068871_101960303	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300006854\|Ga0075425_102224419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009012\|Ga0066710_100629355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1630	Open in IMG/M
3300010398\|Ga0126383_10504161	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300012202\|Ga0137363_10748470	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300012285\|Ga0137370_10480313	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300012357\|Ga0137384_10033148	All Organisms → cellular organisms → Bacteria → Acidobacteria	4248	Open in IMG/M
3300012357\|Ga0137384_10575734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300012362\|Ga0137361_10023616	All Organisms → cellular organisms → Bacteria	4736	Open in IMG/M
3300012917\|Ga0137395_11058347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012923\|Ga0137359_11070863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300012930\|Ga0137407_11049308	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300012960\|Ga0164301_10119686	All Organisms → cellular organisms → Bacteria → Acidobacteria	1553	Open in IMG/M
3300014325\|Ga0163163_10178725	All Organisms → cellular organisms → Bacteria → Acidobacteria	2169	Open in IMG/M
3300014638\|Ga0181536_10321922	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300016341\|Ga0182035_10320418	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300016422\|Ga0182039_11769616	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300017943\|Ga0187819_10354091	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300017959\|Ga0187779_10459673	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300017975\|Ga0187782_10192068	Not Available	1526	Open in IMG/M
3300018085\|Ga0187772_11230317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caldimonas → Caldimonas tepidiphila	552	Open in IMG/M
3300018468\|Ga0066662_10311879	All Organisms → cellular organisms → Bacteria → Acidobacteria	1329	Open in IMG/M
3300020199\|Ga0179592_10270608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300022531\|Ga0242660_1120712	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300025906\|Ga0207699_10474049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300025922\|Ga0207646_10903123	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300026548\|Ga0209161_10336626	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300027825\|Ga0209039_10421083	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300031820\|Ga0307473_10746967	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300031879\|Ga0306919_10154061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1678	Open in IMG/M
3300031912\|Ga0306921_11289184	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300032205\|Ga0307472_100101748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1979	Open in IMG/M
3300032892\|Ga0335081_12042460	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300032893\|Ga0335069_11911446	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.91%
Host-Associated	Host-Associated	6.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.74%
Aquatic	Environmental → Aquatic	12.17%
Plants	Host-Associated → Plants	5.22%
Human	Host-Associated → Human	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.87%
Freshwater	Environmental → Aquatic → Freshwater	9.57%
Sediment	Environmental → Aquatic → Sediment	2.61%
Roots	Host-Associated → Plants → Roots	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%
Peat	Environmental → Terrestrial → Peat	0.87%
Digestive System	Host-Associated → Human → Digestive System	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.74%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.87%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00357140	2088090014	Soil	GNTAIATGDFMAKGTDETGKPMDLHERFTDTWLKMPNKQWQCVASHSSPVKM
INPgaii200_09607142	2228664022	Soil	MKGTKVVSAENADVKVTGFGNTAIATGRFKSKGTDGSDKPFALDIQWTDTWMKMPNGQWQCIASHASPAKM
INPhiseqgaiiFebDRAFT_1016890802	3300000364	Soil	MKGTKVVSAENADVKVTGFGNTAIATGRFKSKGTDGSDKPFALDIQWTDTWMKMPNGQWQCIASHASPAKM*
JGI12270J11330_1000579411	3300000567	Peatlands Soil	SVFGDAAIATGGIKGSETDASGKTVTVDERWTDTWVKMPGGKWQCVASQATPVKM*
JGI1027J12803_1014537041	3300000955	Soil	MKGTKVVSAENADVKVTGFGNTAIATGRFKSKGTDGSDKPFALDIQWTDTWMKMPNGQWQCIASHA
JGI24140J50213_100923042	3300003369	Arctic Peat Soil	AAIATGVYNGKGTDSGKPFDVHERWTDTWVKLAYGQWQCVASQTSPIKK*
Ga0062595_1000755483	3300004479	Soil	HAAIATGVFKAKGTDSLGKPLDTHERFTDTWVKMPNGQWQCIASHQSSIEM*
Ga0062595_1010737992	3300004479	Soil	FGDTAIAIGTFKAKGTDGTGKPMDVRERFTDTWVKMPNGKWQCVASQGTAVKEM*
Ga0058859_106819822	3300004798	Host-Associated	VTAFLHAAIATGVFKAKGTDSLGKPLDTHERFTDTWVKMPNGQWQCIASHQSSIEM*
Ga0066680_107888951	3300005174	Soil	DVKVTVFGDTAIATGGFKGKGTDAMGKPFDNNERWTDTWMKMPTGKWQCVASQATPIKM*
Ga0066684_104229333	3300005179	Soil	TAIATGDFKAKGTDNFGKPMDVHERFTDTWVKMPNGQWQCVASHGAPVKM*
Ga0070666_105145971	3300005335	Switchgrass Rhizosphere	DTAIATGDFIAKGTDPSGKPLNSHERYTDTWVKMPNGQWQCVASHGSPVTM*
Ga0070710_106167312	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AIATGVFKAKGTDESGKPMDLRERFTDTWVKMPGGKWQCVASHGSPVKV*
Ga0070711_1007058113	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NTAIATGGFKGKGTDSEGKPFDTHERWTDTWVKMPSGEWQCVATQGTPLKM*
Ga0070707_1005813532	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AFGGTAIATGDFKAKGTDASGKPLDVHERFTDTWVKMPNGQWQCVASHQSLVKM*
Ga0070707_1007427692	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKVTAFGGTAIATGDFKAKGTDASGKPLDAHERFTDTWVRMPNGKWECVASHQSPVKM*
Ga0070707_1022788821	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TVFGDTAIATGGLKGRGTDASGKPFDLDVRWTDTWVKMPSGKWQCVASHDSTIKM*
Ga0070732_107283622	3300005542	Surface Soil	AIATGGFKAKGTGPSGKPLDVTEQFTDTWMKMPNGQWQCIASHSSAVKM*
Ga0066708_101359781	3300005576	Soil	VTVFGNTAIASGGFKSKGTDAAGKPFDNNERWTDTWMKMPGGKWQCVASHSSLVKA*
Ga0075023_1004412961	3300006041	Watersheds	VTVFGDTAIATGGLNGKGTDGSGKPFVVDERWTDTWVKMPNGKWQCVASHASPVKM*
Ga0075029_1002500722	3300006052	Watersheds	FGDTAIATGVYNGKGTRSGKAFDVHERWTDTWVKLANGQWQCVASQTSPIKK*
Ga0070715_105737572	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TVFGDTAIATGGFKAKGTDPKGKPFDIHERWTDTWVKMPSGKWVCVASASSPMAT*
Ga0068871_1019603032	3300006358	Miscanthus Rhizosphere	KVVAFGNTAIATGNFVAKGSDEAGKPMDLHERFTDTWLKMPNKKWQCVASHSSPVKM*
Ga0066665_116216441	3300006796	Soil	FGDTAIATGDYKATGTDAPGKSWDVHVRYTDTWVKMPNGQWQCVASQSTPVKM*
Ga0079221_101556302	3300006804	Agricultural Soil	TAFGNTAIATGVYKGKGTDGGKPFDETERWTDTWVKMPGGKWLCVADHNTAVSK*
Ga0079220_113901411	3300006806	Agricultural Soil	VYGSTAIATGVYKGKGTDGGKAFDEVERWTDTWVKMPNGKWQCVADHSTAVSK*
Ga0075425_1022244191	3300006854	Populus Rhizosphere	AIATGGFKGKGTDESGKPFDIYVRWTDTWVKMPSGKWQCVASHGSTIKT*
Ga0075435_1009562321	3300007076	Populus Rhizosphere	VSQHRHRYCVYRGKGPGEGKAFDEVERWTDTWVKMPNGKWQCPADHNTTVAK*
Ga0066710_1006293552	3300009012	Grasslands Soil	AIAMGGFEAKGTDASGKPLDVHERWTDTWVKMPKGQWQCVASHQSLVKM
Ga0099830_107156191	3300009088	Vadose Zone Soil	NDVKVTVFGDTAIATGGFKGKGTDASGKPFDVHERWTDTWVKMPNGQWQCVASQTSPVKM
Ga0066709_1017987021	3300009137	Grasslands Soil	KVTVFGDTAIATGGFREKGTDAMGRPFDNNERWTDTWMKMPSGKWQCVASQATPIKM*
Ga0116106_12110471	3300009645	Peatland	VKVTGFGNTAIATGGFKAKGIDASGKPLDAHERWTDTWVKMPNGQWQCV
Ga0116224_101419973	3300009683	Peatlands Soil	NAAIATGGSKGKQTDAAGKTTDINNRWTDTWVKMPSGKWQCVASHVSNVTK*
Ga0116223_103937432	3300009839	Peatlands Soil	MPTTAFGDTAIATGGFKGKGTDPSGKPIDEHTHWPDVWVKMPNGKWQCVE
Ga0136449_1008542502	3300010379	Peatlands Soil	SAEYENVQVTVFGDTAIAAGGFVAKGTDPKGKPFDIHERWTDTWVKMPSGKWVCVASQSTPIAK*
Ga0134126_115490802	3300010396	Terrestrial Soil	AENSDLKVTVFGDAAIATGNEKLKGTDASSKPLDLNERWTDTWVKMASGKWQCIATHQSPIKM*
Ga0126383_105041613	3300010398	Tropical Forest Soil	QMTVFGDTAIATGLWVGKGTDEKGKSFDLRDRWTDTWVKMPNGKWQCVATQSTTAKL*
Ga0126383_113347401	3300010398	Tropical Forest Soil	NTAIATGGFKGKGTDATGKPLNVNERWTDTWVKMPNGQWQCVASHASPGDDK*
Ga0126383_132227271	3300010398	Tropical Forest Soil	TAIATGGFKGKGTDASGKPFEANERWTDTWVKMPNGQWQCVATQATPTKM*
Ga0137392_111434261	3300011269	Vadose Zone Soil	TAIATGGFKGKGTDAAGKPFDNNERWTDTWTKMPSGKWQCVASHASLAKA*
Ga0137388_120317651	3300012189	Vadose Zone Soil	DVKVTVFGDTAIATGGFKGKGTDAMGKPFDNNERWTDTWMKMPSGKWQCVASHATPIKM*
Ga0137363_107484701	3300012202	Vadose Zone Soil	NVKVTAFGGKAIATGDFKAKGIDASGKPLDAHERFTDTWVKMPNGNWECVASHQSPVKM*
Ga0137399_115457751	3300012203	Vadose Zone Soil	EYDDVKVTVFGDTAIATGGFREKGTDAMGRPFDNNERWTDTWMKMPSGKWQCVASQATPIKM*
Ga0137370_104803131	3300012285	Vadose Zone Soil	TAIAMGGFEAKGTDASGKPLDVHERWTDTWVKMPNGQWQCVASHQSLVKM*
Ga0137387_100249221	3300012349	Vadose Zone Soil	AIATGGFTGKFTDPSGKLVDANERWTDTWVKTSTGKWQCVASHVSSVKI*
Ga0137372_110825661	3300012350	Vadose Zone Soil	VTVFGDTAIATGGFKGKGTDESGKSLDVHERWTDTLVKMPNGQWQCVASHVSPVKM*
Ga0137384_100331484	3300012357	Vadose Zone Soil	VKVTAFGGTAIATGDFKAKGTDASGKPLDAHERFTDTWVKMPNGNWECVASHQSPVKM*
Ga0137384_105757342	3300012357	Vadose Zone Soil	GDTAIATGGFKAKGTDASGKPLDVHERWTDTWMKVSNGQWQCVASHSSPVKM*
Ga0137361_100236161	3300012362	Vadose Zone Soil	IATGGFKAKGTDASGKPFDTNERFTDTWVKMPNGKWQCVATHESPLKM*
Ga0137395_110583472	3300012917	Vadose Zone Soil	VFGDTAIATGGFKGKGTDAAGKPFDNNERWTDTWTKMPSGKWQCVASHASLAKA*
Ga0137359_110708631	3300012923	Vadose Zone Soil	AIATGVFKAKETDASGKPRDVHERFTDTWVKMPNGQWQCVASQGSPIKM*
Ga0137407_110493081	3300012930	Vadose Zone Soil	TAIATGGFKGKGTDPSGKPMDVQERFTDTWVKMSNGQWQCVASHVSSVKM*
Ga0126375_106646462	3300012948	Tropical Forest Soil	TVFGDTAIAMGGFKGKGTDASGKSFDAHIRWTDTWVKMPGGKWQCVASAESPAKSS*
Ga0164301_101196861	3300012960	Soil	FGDAAVATGDFKAKGTDPDGKALDVHERFTDTWVKGPKGQWQCVASHQSTVK*
Ga0181532_100252981	3300014164	Bog	AVFYDTAIATGGLKGTGTDASAKLFDLNIRWTDTWVKMPNGEWQCVASHASAVSM*
Ga0181532_101399121	3300014164	Bog	AVFYDTAIATGGLKGTGTDASAKLFDLNIRWTDTWVKMPNGKWQCVASHASAVSM*
Ga0181523_100214751	3300014165	Bog	LVDVKSIKWSRAEYSDLKVAVFYDTAIATGGLKGTGTDASAKLFDLNIRWTDTWVKMPNGEWQCVASHASAVSM*
Ga0181523_105980322	3300014165	Bog	LVDVKSIKWSRAEYSDLKVAVFYDTAIATGGLKGTGTDASAKLFDLNIRWTDTWVKMPNGKWQCVASHASAVSM*
Ga0163163_101787252	3300014325	Switchgrass Rhizosphere	LKVVAFGNTAIATGDFMAKGTDDAGKPMDLHERFTDTWLKMPNKKWQCVASHSSPVKM*
Ga0163163_102370071	3300014325	Switchgrass Rhizosphere	TVFGDTAIATGGFKGKGTDPSGKPMDVQERFTDTRVKMQNGQWQCVASHVSTLKM*
Ga0181536_103219222	3300014638	Bog	VKVTVFGKTAIASGDWVGKGTDADGKAVDAHERWTDTWVEMSGGKWQCVASHGSAIKM*
Ga0182035_103204181	3300016341	Soil	TAIAIGTFRSKGTDASGKPLDANERFTDTWVKMPNGKWQCVASHESPVKM
Ga0182034_111509001	3300016371	Soil	TVFGNTAIATGGFKGKGTDSEGKPFDTHERWTDTWVKMPNGEWQCVATQGTPVKM
Ga0182039_117696161	3300016422	Soil	LKVIVFDNTAIAIGNFRAKGTDPSGKPLDTNERFTDTWVKMPNGKWQCVASHQSPIKT
Ga0187814_101209943	3300017932	Freshwater Sediment	MKLTVFGETVVATGNFSGEGTDPSGKSFEVHERWTHTWVKMPSGQWQCAA
Ga0187809_104324781	3300017937	Freshwater Sediment	AEYYDVKVTAFGNTAIATGGFKGKGTDALGKAFDTNERWTDTWMKMSNGKCQCIATQSTPVKM
Ga0187853_103421942	3300017940	Peatland	NVKVTVFGKTAIATGDWIGKGTDDKGKPIDAHERWTDTWIEMSGGKWQCVASHSSPIKM
Ga0187819_103540913	3300017943	Freshwater Sediment	FGDTAIAIGNFRGKGTDPSGKPLDANERFTDTWTKMADGKWQCVASHQSPVTM
Ga0187779_104596731	3300017959	Tropical Peatland	AIAIGLWKAKGTDASGKPIKTAERFTDTWVKMPSGKWQCVATQVTTANL
Ga0187782_101920682	3300017975	Tropical Peatland	MVFRDTAIAIGNFRAKGTDASGKPLDLNERFTDTWTKTADGKWQCVASHQSPIKV
Ga0187772_112303171	3300018085	Tropical Peatland	IATGGFKGKGTDASGKPFEEHERWTDTWVKMPGGKWQCVATQASAVVK
Ga0066662_103118791	3300018468	Grasslands Soil	VKVTAFGGAAIATGDFKAKGTDSSGKPLDTHERFTDTWVKMPNGQWQCVASHQSPIEM
Ga0179592_102706081	3300020199	Vadose Zone Soil	FYKKTKWDSAEYIDVKDTVFGDTAIATGGFKGKGTDAAGKPVDNNERRSDTWTKMPSGKRQCVASHASPAKA
Ga0210399_115227931	3300020581	Soil	DTAIVTGGFKGKGADGKGKPFDDHSSWTDTWVKMPNGKWQCVASQDTPITM
Ga0210401_110323972	3300020583	Soil	TVFGDTAIATGGFKGMGTDASGKPMDVHERWTDTWVKMPSGKWQCVASQSSTIAM
Ga0210401_111959692	3300020583	Soil	TAIATGDFKGKGTDQSGKAIDEHSRWTDTWVKMPNGKWQCVASQDTPVKK
Ga0210405_101473771	3300021171	Soil	AIASGGFKGKGTDASGKPFNANERWTDTWMKMLDGKWQCIATQATPVKM
Ga0210386_100322721	3300021406	Soil	DVKVTGFGDTAIATGGFKAKGTDDKGKPLDVNEHFTDTWMKMPSGKWQCIASHTSTVKM
Ga0210384_102142455	3300021432	Soil	FGDTAIATGGFKGKGTDAMGKPFDNNNERWTDTWMKMPSGKWQCVASHATPIKM
Ga0210384_105336352	3300021432	Soil	DVKVTVFGDTAIATGGFKGKGTDAMGKPFDNNERWTDTWMKMPTGKWQCVASQATSIKM
Ga0126371_105766761	3300021560	Tropical Forest Soil	TGVYRGKGTGEGKPFDEVERWTDTWVKMPNGKWQSVADHNTTISK
Ga0242660_11207121	3300022531	Soil	KDTAIATGDWTGKGTDSKGKSVDTRERWTDTWMKMSNGKWQCVASHSSTIKM
Ga0224549_10176812	3300022840	Soil	VTVFGDTAIVTGGFKGKGTDATGTPFDENERWTDTWVKMPGGKWQCVASQVTSIKT
Ga0247695_10232411	3300024179	Soil	VTVFENTAIATGGLKGKGTDASGKPFVVDERWTDTWVKMANGKWQCVASHSSAVKM
Ga0208479_11003892	3300025474	Arctic Peat Soil	TAIATGRFHAKTTDAAGKSHESQVRWTDTWVKMPNGKWQCVASAFSPIKM
Ga0207685_104698721	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	TVFGDTAIATGGFKAKGTDPKGKPFDIHERWTDTWVKMPSGKWVCVASASSPMAT
Ga0207699_104740493	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TAFGGAAIATGDFKAKGTDSSGKPLDTHERFTDTWVKMPNGQWQCVASHQSSIEM
Ga0207663_101238803	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NTAIATGGFKGKGTDSEGKPFDTHERWTDTWVKMPSGEWQCVATQGTPLKM
Ga0207646_109031231	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AFGGTAIATGDFKAKGTDASGKPLDVHERFTDTWVKMPNGQWQCVASHQSLVKM
Ga0207665_104635142	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GNTAIAIGASKAKGTDELGKPIDEHVRWTDTWVKMPSGKWQCVASHVSPIKS
Ga0209161_103366262	3300026548	Soil	TAIAMGGFEAKGTDASGKPLDVHERWTDTWVKMPNGQWQCVASHQSLVKM
Ga0209418_10972581	3300027371	Forest Soil	VSAEYENVQVTVFGDTAIATRVFNAKATDASGEPMDIHERWADTWVKMSKGQWQCAASHQSPVKM
Ga0209734_10696821	3300027535	Forest Soil	VTVFGDTAIATGGFKGKGTDEMGKPFDDNERWTDTWVKMPSGKWQCVASSATPIKM
Ga0208827_11365391	3300027641	Peatlands Soil	VFGNTAIATGNWVGKGSDENGKPVDTHERWTDTWMKMSNGKWQCVASHSSTIKM
Ga0209626_11156432	3300027684	Forest Soil	ADVKVTVIGDTAIATGGFKGTGTDGSGKAFDVHERWTDTWVKMPGGQWQCVATQSTSVKM
Ga0209039_104210832	3300027825	Bog Forest Soil	MACNSLLPGGYNGKGTEAGKAFDEHERWTDTWVKMPDGKWQCVATQGSAVKM
Ga0209274_103086223	3300027853	Soil	YTDVKVTVFGDAAIATGGFAGKGTDPMGKAFDNHERWTDTWVKMPSGKWQCVASQVSPVK
Ga0209415_101822744	3300027905	Peatlands Soil	NAAIATGGSKGKQTDAAGKTTDINNRWTDTWVKMPSGKWQCVASHVSNVTK
Ga0209698_104352261	3300027911	Watersheds	VFGDAAVVTGGYKGKGTDAGAKPFEVHLQWTDTWVKMPNGKWQCVASQDTPIK
Ga0170824_1133558402	3300031231	Forest Soil	VTVFGNTAIATGGFKAKGTDTSGKAVDENSRFTDTWVKMPSGKWQCVASQDTPVT
Ga0170818_1031009072	3300031474	Forest Soil	MKWNTAGYTDLKVTVFGDTAIATGDFKSKGTDAAGKSFDVDIRWTDTCMKMPSGQWQRIASQGTPVKA
Ga0306917_101486431	3300031719	Soil	VHVTVYGSTAIATGVYRGKGTGEGKPFNEVERWTDTWVKMPNGMWQCVADHNTTISK
Ga0306918_100650184	3300031744	Soil	DTAIATGLWVGKGTDEKGKPFDDRDRWTDTWVKMPNGKWQCVATQSTTVKM
Ga0318576_101869373	3300031796	Soil	ENVQVTVFGDTAIATGLWVGKGTDEKGKPFDDRDRWTDTWVKMPNGKWQCVATQSTTVKM
Ga0307473_107469672	3300031820	Hardwood Forest Soil	VMVFGDAAVATGGFTAKGTDPSGKPLDVRERWTDTWIKMPSGKWQCVASHGSVIKG
Ga0307478_105054942	3300031823	Hardwood Forest Soil	SVVNTDVKVTVFGDTAIATGGIKAKGTDASGKALDINERWTDTWVKMPNGQWQCVASQGTPVKI
Ga0306919_101540611	3300031879	Soil	AIATGLFIGKGTNEKGKPFDVRVRWTDTWVKMPNGKWQCVATQDTAV
Ga0318520_103114131	3300031897	Soil	TVYGSTAIATGVYRGKGTGEGKPFNEVERWTDTWVKMPNGKWQCVADHNTTISK
Ga0306921_112891842	3300031912	Soil	VIVFGDAAVAIGGFKGKGTDASGKPFDTNERFTDTWMKTSKGKWQCIASHQSSVKM
Ga0311301_101752351	3300032160	Peatlands Soil	TVFGDTAIATGGFKGKATESGKPLGENERWTDTWVKMPGGQWQCVASQASPIKE
Ga0307472_1001017481	3300032205	Hardwood Forest Soil	TAFGDTAIATGGFKAKGTDASGKLFDEHERFTDTWVKMPSGQWQCVASHTSSVIM
Ga0335085_125250912	3300032770	Soil	NVHVTVFGSTAIATGVYKGKGTDGGKAFDEVERWTDTWVKMPNGKWQCVADHNTAISK
Ga0335078_108475081	3300032805	Soil	AKATKYTDFSYVDLKVSVYGNAAIATGGSKGKQTDAAGKTTDINNRWTDTWVKMPSGKWQCVASHVSNVTK
Ga0335081_120424601	3300032892	Soil	VAIAAGVYNGKGTDSGKPFDVHERWTDTWVKMAGGQWQCVASQGTAI
Ga0335069_119114461	3300032893	Soil	AIATGTFKGKGTESGKPLDEHERFTDTWVKSPSGQWQCVASQGSPIKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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