Metagenome / Metatranscriptome Family F080461

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080461
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	75 residues
Representative Sequence	SAAASATPDAFPPDRLDDLAADLAFEITFARNLVPGRPGRRYERKTKRPGGRYKTRRPGETARLTPLTRIVFWLMPVPA
Number of Associated Samples	93
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.61 %
% of genes near scaffold ends (potentially truncated)	73.04 %
% of genes from short scaffolds (< 2000 bps)	87.83 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.696 % of family members)
Environment Ontology (ENVO)	Unclassified (35.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.870 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.89% β-sheet: 13.08% Coil/Unstructured: 71.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13006	Nterm_IS4	6.09
PF01609	DDE_Tnp_1	5.22
PF13191	AAA_16	1.74
PF13412	HTH_24	1.74
PF00248	Aldo_ket_red	1.74
PF13683	rve_3	1.74
PF02659	Mntp	1.74
PF13365	Trypsin_2	1.74
PF07731	Cu-oxidase_2	0.87
PF08245	Mur_ligase_M	0.87
PF00215	OMPdecase	0.87
PF00313	CSD	0.87
PF00296	Bac_luciferase	0.87
PF13424	TPR_12	0.87
PF00069	Pkinase	0.87
PF00753	Lactamase_B	0.87
PF07883	Cupin_2	0.87
PF01266	DAO	0.87
PF12867	DinB_2	0.87
PF07366	SnoaL	0.87
PF09587	PGA_cap	0.87
PF13419	HAD_2	0.87
PF00144	Beta-lactamase	0.87
PF00872	Transposase_mut	0.87
PF13565	HTH_32	0.87
PF00535	Glycos_transf_2	0.87
PF04542	Sigma70_r2	0.87
PF03055	RPE65	0.87
PF08751	TrwC	0.87
PF00078	RVT_1	0.87
PF05222	AlaDh_PNT_N	0.87
PF00196	GerE	0.87
PF00190	Cupin_1	0.87
PF04149	DUF397	0.87
PF00072	Response_reg	0.87
PF13408	Zn_ribbon_recom	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	5.22
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	5.22
COG5421	Transposase	Mobilome: prophages, transposons [X]	5.22
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	5.22
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	5.22
COG3293	Transposase	Mobilome: prophages, transposons [X]	5.22
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.48
COG1971	Putative Mn2+ efflux pump MntP	Inorganic ion transport and metabolism [P]	1.74
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.87
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.87
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.87
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.87
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.87
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.87
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.87
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.96 %
Unclassified	root	N/A	43.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.09 %
Unclassified	root	N/A	43.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.48 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.61 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.61 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.61 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.87 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.61 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.61 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.74 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	1.74 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.87 %
Streptosporangiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis	0.87 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.87 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.74 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.74 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.74 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.87 %
Allonocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis	0.87 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.87 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.87 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.74 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.74 %
Microlunatus elymi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	0.87 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.87 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	0.87 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.87 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.87 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.61 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1.74 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.74 %
Streptomyces sp. KM273126	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KM273126	0.87 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.87 %
Microlunatus elymi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	0.87 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	0.87 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.87 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.87 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10006621	All Organisms → cellular organisms → Bacteria	5016	Open in IMG/M
3300004091\|Ga0062387_101518822	Not Available	538	Open in IMG/M
3300004635\|Ga0062388_100226981	Not Available	1499	Open in IMG/M
3300005435\|Ga0070714_100365203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1358	Open in IMG/M
3300005560\|Ga0066670_10417066	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005614\|Ga0068856_101793923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300005861\|Ga0080006_1191148	Not Available	1506	Open in IMG/M
3300005950\|Ga0066787_10117762	Not Available	579	Open in IMG/M
3300006028\|Ga0070717_10213658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1694	Open in IMG/M
3300006031\|Ga0066651_10322991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	828	Open in IMG/M
3300006050\|Ga0075028_100905182	Not Available	544	Open in IMG/M
3300006059\|Ga0075017_101627659	Not Available	510	Open in IMG/M
3300006172\|Ga0075018_10152464	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1067	Open in IMG/M
3300006174\|Ga0075014_100631439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	616	Open in IMG/M
3300006605\|Ga0074057_12300733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	540	Open in IMG/M
3300006854\|Ga0075425_101696682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300009029\|Ga0066793_10010260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4928	Open in IMG/M
3300009090\|Ga0099827_10012082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5642	Open in IMG/M
3300009090\|Ga0099827_11206343	Not Available	658	Open in IMG/M
3300009143\|Ga0099792_10773249	Not Available	627	Open in IMG/M
3300009521\|Ga0116222_1072022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1493	Open in IMG/M
3300009645\|Ga0116106_1301603	Not Available	510	Open in IMG/M
3300009764\|Ga0116134_1259600	Not Available	599	Open in IMG/M
3300009764\|Ga0116134_1268955	Not Available	587	Open in IMG/M
3300010373\|Ga0134128_12199961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300010376\|Ga0126381_100766946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1383	Open in IMG/M
3300010379\|Ga0136449_100841351	Not Available	1507	Open in IMG/M
3300010379\|Ga0136449_102442036	Not Available	752	Open in IMG/M
3300011269\|Ga0137392_11133776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300011269\|Ga0137392_11300983	Not Available	586	Open in IMG/M
3300011270\|Ga0137391_10706417	Not Available	837	Open in IMG/M
3300012089\|Ga0153924_1064252	Not Available	720	Open in IMG/M
3300012096\|Ga0137389_10843576	Not Available	787	Open in IMG/M
3300012199\|Ga0137383_10889067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	650	Open in IMG/M
3300012200\|Ga0137382_10342570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1048	Open in IMG/M
3300012201\|Ga0137365_10416101	Not Available	991	Open in IMG/M
3300012201\|Ga0137365_10645354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	775	Open in IMG/M
3300012204\|Ga0137374_10439452	Not Available	1027	Open in IMG/M
3300012208\|Ga0137376_11384518	Not Available	594	Open in IMG/M
3300012209\|Ga0137379_10048809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4082	Open in IMG/M
3300012210\|Ga0137378_10402491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1270	Open in IMG/M
3300012211\|Ga0137377_10239855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1741	Open in IMG/M
3300012211\|Ga0137377_11235578	Not Available	677	Open in IMG/M
3300012350\|Ga0137372_10014484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7501	Open in IMG/M
3300012350\|Ga0137372_11041149	Not Available	567	Open in IMG/M
3300012351\|Ga0137386_11107204	Not Available	559	Open in IMG/M
3300012353\|Ga0137367_10337617	Not Available	1073	Open in IMG/M
3300012354\|Ga0137366_10655967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300012357\|Ga0137384_10496801	Not Available	1002	Open in IMG/M
3300012359\|Ga0137385_10018998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6132	Open in IMG/M
3300012532\|Ga0137373_10011119	Not Available	9359	Open in IMG/M
3300012532\|Ga0137373_10037800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4615	Open in IMG/M
3300012532\|Ga0137373_10929372	Not Available	636	Open in IMG/M
3300012683\|Ga0137398_10219683	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300012683\|Ga0137398_10431175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300012930\|Ga0137407_10836698	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300014164\|Ga0181532_10554815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	626	Open in IMG/M
3300015264\|Ga0137403_10097027	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2959	Open in IMG/M
3300017821\|Ga0187812_1286261	Not Available	524	Open in IMG/M
3300017822\|Ga0187802_10292312	Not Available	634	Open in IMG/M
3300017823\|Ga0187818_10237513	Not Available	796	Open in IMG/M
3300017926\|Ga0187807_1329692	Not Available	511	Open in IMG/M
3300017928\|Ga0187806_1021543	Not Available	1869	Open in IMG/M
3300017928\|Ga0187806_1035495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1487	Open in IMG/M
3300017937\|Ga0187809_10332517	Not Available	566	Open in IMG/M
3300017937\|Ga0187809_10422444	Not Available	511	Open in IMG/M
3300017942\|Ga0187808_10604931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KM273126	509	Open in IMG/M
3300017943\|Ga0187819_10884748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300017955\|Ga0187817_11067673	Not Available	518	Open in IMG/M
3300017959\|Ga0187779_10744978	Not Available	665	Open in IMG/M
3300017961\|Ga0187778_10009073	All Organisms → cellular organisms → Bacteria	6245	Open in IMG/M
3300017961\|Ga0187778_10444766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300017972\|Ga0187781_10111945	Not Available	1900	Open in IMG/M
3300017972\|Ga0187781_10287520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166	Open in IMG/M
3300017975\|Ga0187782_10065334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2654	Open in IMG/M
3300017975\|Ga0187782_10489331	Not Available	940	Open in IMG/M
3300018058\|Ga0187766_10354403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300018062\|Ga0187784_10351884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	1194	Open in IMG/M
3300018064\|Ga0187773_11173948	Not Available	514	Open in IMG/M
3300018085\|Ga0187772_10210338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1309	Open in IMG/M
3300018085\|Ga0187772_10712280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300018090\|Ga0187770_10688767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300018431\|Ga0066655_10483094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300018468\|Ga0066662_10564810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1055	Open in IMG/M
3300019877\|Ga0193722_1081682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300021432\|Ga0210384_11708855	Not Available	535	Open in IMG/M
3300021476\|Ga0187846_10188699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300024227\|Ga0228598_1063124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300025504\|Ga0208356_1048148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300025588\|Ga0208586_1106043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300025634\|Ga0208589_1056288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300025898\|Ga0207692_11126798	Not Available	520	Open in IMG/M
3300025910\|Ga0207684_10364975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1243	Open in IMG/M
3300026294\|Ga0209839_10047155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1572	Open in IMG/M
3300026489\|Ga0257160_1006523	Not Available	1537	Open in IMG/M
3300027045\|Ga0207726_1044450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	604	Open in IMG/M
3300027570\|Ga0208043_1048707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1245	Open in IMG/M
3300027767\|Ga0209655_10160652	Not Available	743	Open in IMG/M
3300027795\|Ga0209139_10046181	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300027824\|Ga0209040_10097778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1667	Open in IMG/M
3300027824\|Ga0209040_10498921	Not Available	541	Open in IMG/M
3300027846\|Ga0209180_10280716	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300027882\|Ga0209590_10005988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5331	Open in IMG/M
3300028784\|Ga0307282_10066441	Not Available	1632	Open in IMG/M
3300029943\|Ga0311340_10821622	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031708\|Ga0310686_104340893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1653	Open in IMG/M
3300031708\|Ga0310686_106029146	Not Available	516	Open in IMG/M
3300031708\|Ga0310686_118763464	Not Available	587	Open in IMG/M
3300032160\|Ga0311301_10649492	Not Available	1502	Open in IMG/M
3300032160\|Ga0311301_10688835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300032783\|Ga0335079_10194923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2250	Open in IMG/M
3300032783\|Ga0335079_10215351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2125	Open in IMG/M
3300032783\|Ga0335079_10243697	Not Available	1979	Open in IMG/M
3300032805\|Ga0335078_10879720	Not Available	1079	Open in IMG/M
3300032892\|Ga0335081_10507288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.52%
Host-Associated	Host-Associated	3.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.91%
Aquatic	Environmental → Aquatic	22.61%
Plants	Host-Associated → Plants	2.61%
Fungi	Host-Associated → Fungi	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.17%
Freshwater	Environmental → Aquatic → Freshwater	18.26%
Sediment	Environmental → Aquatic → Sediment	3.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%
Peat	Environmental → Terrestrial → Peat	0.87%
Cave	Environmental → Terrestrial → Cave	0.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.87%
Mycelium	Host-Associated → Fungi → Mycelium	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.26%
Loam	Environmental → Terrestrial → Soil → Loam	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.22%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.61%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Hypersaline Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hypersaline Mat	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.87%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005861	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPADES assembly)	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_100066211	3300002917	Grasslands Soil	LADLAFEITIERSLVPERPGRRYERATKRPGGRYKTRKPGQASRLPPLTKIRFWPLPVPA
Ga0062387_1015188221	3300004091	Bog Forest Soil	PSAAASATPDAFPPQLLDELTADLAAEITWHRHLVPRRPGRRYERKTKRPAGRYKTRRHGEATRLTPLTKVVFWLMPAPA*
Ga0062388_1002269812	3300004635	Bog Forest Soil	VTPSAAASATPDAFPPDRLGDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYKTAKPGQTTRLTPLTRIVFWLMPVPSLI*
Ga0070714_1003652032	3300005435	Agricultural Soil	VTPSAAASATPDAFPPDPLDDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYRTAKPGETTRLTPLTRIVFWLMPVPSLI*
Ga0066670_104170661	3300005560	Soil	TPPGSPSPAPATESAAASATPEAFPPDRLADLAADLAFEITFARNLVPRRPGRRYERKTKRPGGRYKTRKPGQTAQLTPLTRIVLWLMPVPA*
Ga0068856_1017939231	3300005614	Corn Rhizosphere	DAFPPDPLDDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYRTAKPGETTRLTPLTRIVFWLMPVPSLI*
Ga0080006_11911481	3300005861	Hypersaline Mat	LAFEITCKRNLVPERPHRRYARETKRPGGRYKTRKPGQTARLTPLMVIRFWPTLSPP*
Ga0066787_101177622	3300005950	Soil	AAASATPVAFPPDSLGDLAADLAFEITFARNLVPQRPGRRYERKTKRPGGRYKTRKPGGTARLTPLTVVVFWLMPVPSLT*
Ga0070717_102136582	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAFEITFHRNLVPRRPGRRYERQTKRPGGRYKTRKPGETARLTPLTKIVFWLIPVPA*
Ga0066651_103229912	3300006031	Soil	VTGSAAASATPDAFPPDGLAAAVADLAFEITFARNLVPQRPGRRCERKTKRPGGRYKTRKPGEKTRLTPLTRIVFWSLPVPNLT*
Ga0075028_1009051821	3300006050	Watersheds	ARPSAAASATPDAFPPQLLDELAADLAAEITWHRHLVPRRPGRRYERKTKRPGGRYKTRKHGEATRLTPLTKVVFWLMPVPA*
Ga0075017_1016276592	3300006059	Watersheds	VTRSAGGSATLGLSPPEQLEEALADLNFEITFHRSLVPERPGRRYARETKRPGGRYKTRKRGQPSRLTPLTVIKFWLLPVPT*
Ga0075018_101524641	3300006172	Watersheds	LDELAADLAAEITWHRHLVPHRPGRRYERKTKRPGGRYKTRKHGEATRLTPLTKVVFWLMPVPA*
Ga0075014_1006314392	3300006174	Watersheds	SAAASATPDAFPPPQLDELAAGLAAEITYHRNLIPSRPGRRYERKTKRAGGRYKTRKHGESTRLTPLTTVVFWLMPIPT*
Ga0074057_123007332	3300006605	Soil	LAAEITWHRHLVPARPGRRYERKTKRPGGRYKTRKPGETTRLTPLTKIILAYAGSG*
Ga0075425_1016966821	3300006854	Populus Rhizosphere	ELAAGLAAQITHHRHLVPRRPGRRYERKTKRPGGRYKTRKHGEATRLTPLTTVVFWLMPIPT*
Ga0066793_100102604	3300009029	Prmafrost Soil	SGCFSPQHLASLAADLAFEITLARNLVPLRPGCRHERTTKRPGGRYKTRKPGETTRLTPLTRTVFWLMPVPALT*
Ga0099827_100120825	3300009090	Vadose Zone Soil	HHLDELAADLAAEITYHRRLVPHRPGRRYERKTKRPGTRYKTRKPGETTRLTPLTKIVFWLMPVSCLT*
Ga0099827_112063431	3300009090	Vadose Zone Soil	PAPATPSAAASATPDAFPPDRPGDLAADLAFEITCQRNLVPGRPGRRYERKTKRPGGRYKTRRPGETARLTPLTRVVFWLMPIPVLT*
Ga0099792_107732491	3300009143	Vadose Zone Soil	SAAASATPDAFPPEHLAGLAADLAFEITFHRNLVPGRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTRIVFWLMPIPT*
Ga0116222_10720221	3300009521	Peatlands Soil	DAFPPPLLDELAADLAAQITWHRHLVPHRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTKIVFWRIPIPT*
Ga0116106_13016031	3300009645	Peatland	RLGDLAADLAFEITFARNLVPGRPGRRYERKTKRPGGRYKTRKPGQTARLTPLTRIVFWLMPIPA*
Ga0116134_12596001	3300009764	Peatland	DLAAQITWHRHLIPRRPGRRYERKTKRPGGRYKTRKTGEPTRLVPLTKITFWLMPVPLT*
Ga0116134_12689551	3300009764	Peatland	PPEQLEEALADLNFEITFHRSLVPERPGRRYARETKRPGGRYKTRKRGQPSRLTPLTVIKFWLLPVPT*
Ga0134128_121999611	3300010373	Terrestrial Soil	LDDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYRTAKPGETTRLTPLTRIVFWLMPVPSLI*
Ga0126381_1007669462	3300010376	Tropical Forest Soil	DEALADLAFEITFSRNLVPARPGRRYARQTKRSGGRYKTRRHGQSSLLTPLTVIKFWPLPVPP*
Ga0136449_1008413511	3300010379	Peatlands Soil	GLAATVADLAFEITFARNLVPSRPGRRYERKTKRPGGRYKTRKPGQTAQQTPLTRIVFWLMPVPA*
Ga0136449_1024420363	3300010379	Peatlands Soil	SAAASATPDAFPPEHLGDLAADLAFEITFHRNLVPLRPGRRYERKTKRPGGRYKTRKPGETARLTPLTRIVFWLMPAPTLT*
Ga0137392_111337761	3300011269	Vadose Zone Soil	SAAASATPDAFPPDRLDDLAADLAFEITFARNLVPGRPGRRYERKTKRPGGRYKTRRPGETARLTPLTRIVFWLMPVPA*
Ga0137392_113009831	3300011269	Vadose Zone Soil	ADLAAQITWHRHLVPARPGRRYERKTKRPGGRYKTRKPGETTRLTPLTKIIFWRMPIPT*
Ga0137391_107064172	3300011270	Vadose Zone Soil	SPAPATGSAAASATPDAFPPDRLDDLAADLAFEITFARNLVPGRPGRRYERKTKRPGGRYKTRRPGETARLTPLTRIVFWLMPVPA*
Ga0153924_10642521	3300012089	Attine Ant Fungus Gardens	ARQSGPASATPGAFPPQLLDELTADLAAEITYHRHLVPRRPARRYERKTKRPGGRYKTRKHGEASRLTPLTKVVFWLMPTPSLT*
Ga0137389_108435761	3300012096	Vadose Zone Soil	LAADLAFEITCKRNLVPERPARRYKRETKRPGGRYKTRTPGQTARLTPLTVIRFWLLPVPT*
Ga0137383_108890672	3300012199	Vadose Zone Soil	PATGSAAASATPDAFPPDGLAATVADLAFEITFNRNLVPGRPGRRYERKTKRPRGRYKTRKPGETAQLTPLTRIVFWLMPVPA*
Ga0137382_103425702	3300012200	Vadose Zone Soil	VTPSAAASATPDAFPPDRLGDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYKTARPGQTTRLTPLTRIVFWLMPAPSLI*
Ga0137365_104161011	3300012201	Vadose Zone Soil	AAASATPDAFPPDGLAESAEDLAFEITCQRNLVPRRPGRRCERKTKRPGGRYKTRKPGATTRLTPLTRVVFWLMPIPVLT*
Ga0137365_106453541	3300012201	Vadose Zone Soil	PPDDLDDLAADLAFEITCKRNLVPGRPGRRYARETKRPGGRYKTRKHGQTARMTPLTEIRFWLLPVPP*
Ga0137374_104394522	3300012204	Vadose Zone Soil	DLAFEITHARNLVPHRPGRRYKRETKRAGGRYKTRRPGESARLTPLTVIKYWLMPAST*
Ga0137376_113845181	3300012208	Vadose Zone Soil	DLAADLAFEITFARNLVPLRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTRIVFWLLPSPSLT*
Ga0137379_100488091	3300012209	Vadose Zone Soil	SPSPGPATQSAAASATPDAFPPDGLAASAEDLAFEITCERNLVPERPGRRYERKTKRPGGRYKTRKPGETARLTPLTKIFFWLMPVPA*
Ga0137378_104024912	3300012210	Vadose Zone Soil	MLFPPDSLDDLAADLAFEITCKRNLVPERPGRRYKRETKRAGGRYKTRKHGEPARLTPLTKINFWLLPAPT*
Ga0137377_102398554	3300012211	Vadose Zone Soil	SPAPATGSAAASATPDAFPPDGLAASAEDLAFEITCERNLVPERPGRRYERKTKRPGGRYKTRKPGETARLTPLTKIFFWLMPVPA*
Ga0137377_112355781	3300012211	Vadose Zone Soil	VPATPPGAASATLAAFPPDGLDDLVADFAFEITRKRNLVPRRPGRRYARETKRAGGRYKTRKPGQTARLTPLTVVRLWLMPVPP*
Ga0137372_100144844	3300012350	Vadose Zone Soil	LTSSSPDLAFEITCTRNLVPERPGRRYKRQTKRPGGRYKSRKPGQPARLTPLTVVRFWLMPTPP*
Ga0137372_110411491	3300012350	Vadose Zone Soil	PPDDLDDLAADLAFEITCKRNLVPGRPGRRYARETKRPGGRYKTRKHGQTARMTP*
Ga0137386_111072041	3300012351	Vadose Zone Soil	AFPPEGLAPSPEDLAFEITCERNLVPERPARRYQRKTKGPAGRYKTRKPRETARLTPLTKIFFWLMPVPA*
Ga0137367_103376172	3300012353	Vadose Zone Soil	VTPCGAASATPAPFPPDGLGDLVTDLAFEITCPRNLVPQRPGRRYKRETKRPGGRYKTRKPGRPGRLIPLTVVKFWLMPVPP*
Ga0137366_106559671	3300012354	Vadose Zone Soil	DLDDLAADLAFEITCKRNLVPGRPGRRYARETKRPGGRYKTSKQGQTARMTP*
Ga0137384_104968012	3300012357	Vadose Zone Soil	LFPPDSLDDLAADLAFEITCKRNLVPERPGRRYKRETKRAGGRYKTRKHGEPARLTPLTKINFWLLPAPT*
Ga0137385_1001899810	3300012359	Vadose Zone Soil	AADLAFEITCRRNLVPGRPGRRYERKTKRPGGRYKTRKPGDTTRLTPLTRTVFWLMPVPN
Ga0137373_100111191	3300012532	Vadose Zone Soil	GPATASAPGSAAQVPFPPDDLDDLAADLAFEITCKRNPGPGRPGRRYARETKRPGGRPKTRKHGQTARMTPLTEIRLWLLPVPP*
Ga0137373_100378005	3300012532	Vadose Zone Soil	PPDDLDDLAADLAFEITCKRNLVPGRPGRRYARETKRPGGRYKTRKHGQTARMTPLTEIRFWLLPVPS*
Ga0137373_109293721	3300012532	Vadose Zone Soil	GAASATPAPFPPDGLGDLVTDLAFEITCPRNLVPQRPGRRYKRETKRPGGRYKTRKPGRPGRLIPLTVVKFWLMPVPP*
Ga0137398_102196831	3300012683	Vadose Zone Soil	DRAFEITYHANLVPARPGRRYERKTKRPGGRYKTRKPGETAQLTPLTRIVFWLMPVPA*
Ga0137398_104311751	3300012683	Vadose Zone Soil	VPERPGRRYERKTKRPGGRYKTAKPGETTRLTPLTRIVFWLMPVPQLNLTPLGQGPAPA
Ga0137407_108366981	3300012930	Vadose Zone Soil	PPDRLDDLAADLAFEITCARNLVPLRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTRIFFWLMPVPH*
Ga0181532_105548151	3300014164	Bog	MRNRDRGLCALDDELAAGLAAEITWHRHLVPRRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTKITFWLMPVPA*
Ga0137403_100970271	3300015264	Vadose Zone Soil	SPSPAPATPSAAASATPDAFPPDGLGQAAADLAFEITFARNLVPLRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTRIVFWLMPSPSLT*
Ga0187812_12862611	3300017821	Freshwater Sediment	CGSPSPRPGRQSAAASATPDAFPPPQLDGLAADLAAEITYHRNLIPSRPGRRYERKTKRAGGRYKTRKHGESTRLTPLTTVVFWLMPIPT
Ga0187802_102923122	3300017822	Freshwater Sediment	SAAASATPDAFPPPLLDQLAADLAAQITWHRNLVPARPGRRYERKTKRPGGRYKTRKPGEITRLTPLTKIIFWRMPVPA
Ga0187818_102375131	3300017823	Freshwater Sediment	AGGSATRGLSPPDQLDEALADLNFEITFPRSLVPERPGRRYARETKRPGGRYKTRKRGQPSRLTPLTMIKFWLLPVPT
Ga0187807_13296921	3300017926	Freshwater Sediment	ATRIPFPPQELDLAISDLAFELTCKRSLAGQRPGRRYARQTKRPGGRYKTRKPGQPARLTPLTRVVFWLMPIPNLT
Ga0187806_10215433	3300017928	Freshwater Sediment	DAFPPPLLDELAADLAAEITYHRNLVPSRPGRRYERKTKRAGGRYKTRKHGESTRLTPLTTVVFWLMPIPT
Ga0187806_10354953	3300017928	Freshwater Sediment	MQSGAASATRIPFPPQELDLAIGDLTFELTCKRSLAGQRPGRRYARETKRPGGRYKTRKPGQTSRLTPLTRVVFWLMPVPALT
Ga0187809_103325171	3300017937	Freshwater Sediment	AFPPPLLDQLAADLAAQITWHRNLVPARPGRRYERKTKRPGGRYKTRKPGEITRLTPLTKIIFWRMPVPA
Ga0187809_104224441	3300017937	Freshwater Sediment	TPAWTRPASPLPAPATGSAAASATPDAFPPDGLAAAVADLAFEITFARNLVPRRPGRRYERKTKRPGVRYKTQKPGETAQLTPLTRIVFWLMPVPA
Ga0187808_106049311	3300017942	Freshwater Sediment	ALVADLAFEITCPRNLAPQRPGRRYKRETKRPGGRYKTRKPGQTAKLTPLTVVRFWLLPIPP
Ga0187819_108847481	3300017943	Freshwater Sediment	MQSGAASATRIPFPPQELDLAIGDLTFELTCKRSLAGQRPGRRYARETKRPGGRYKTRKPGQTSRLTPLTRVVFWLMP
Ga0187817_110676731	3300017955	Freshwater Sediment	PGSPSPAPATGSAAASATPEAFPPEHLDGLAADLAFEITFARNLVPERPGRRYQRKTKRPGGRYNTRKPGETARLTPLTRIVFWLMPVPD
Ga0187779_107449783	3300017959	Tropical Peatland	MPCAPASATQAAFPPDRLNDLVADLAFEITCQRNLVPGRPGRRYKRETKRPGGRYKTRKSGQSTRLTPLTVIRFWPMPAPP
Ga0187778_100090736	3300017961	Tropical Peatland	WTRPASPLPAPAAGSAAASETPDAFPPDGLAATVADLAFEITFARNLVPRRPGRRYERKTKRPGGRYKTRKPGETAQLTPLTRIVFWLMPVPA
Ga0187778_104447662	3300017961	Tropical Peatland	VTRSAGGSATRVPFPPPELDDALADLAFEITFPRNLVPDRPGRRYARETKRPGGRYKTRKHGQSSRLTPLTVIKFWLMPAP
Ga0187781_101119453	3300017972	Tropical Peatland	VPATPSAAASATPAAFPPDRLAGLAADLAFEITFPRNLVPSRPGRRYERKTKRPGGRYKTRKPGEPSRLTPLTRIVFWLMPVPTLI
Ga0187781_102875201	3300017972	Tropical Peatland	VTPSAAASATPDAFPPDRLAGLAADLAFEITFRRNLVPERPGRRYERKTKRPGGRYKTRKPGETTRLTPLTRIVFWLMPAPSLI
Ga0187782_100653342	3300017975	Tropical Peatland	VTPSAAASATPDAFPPDHLDGLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYKTRKPGETTRLTPLTRIVFWLMPAPSLI
Ga0187782_104893312	3300017975	Tropical Peatland	RGSGVASATRDPFPPQELDQAIGDLAFEITCKRNLAGERPGRRYERKTKRPGGRYKTRKPGQTSRLTPLTRVVFWLMPVSGLT
Ga0187766_103544032	3300018058	Tropical Peatland	MRSAGGSATRVRFPPPELDDALADLAFEITFPRNLVPDRPGRRYARETKRPGGRYKTRKHGQSSRLMPLTVIKFWLMPAPT
Ga0187784_103518842	3300018062	Tropical Peatland	AFPPDRLAGLAADLAFEITFPRNLVPSRPGRRYERKTKRPGGRYKTRKPGEPSRLTPLTRIVFWLMPVPTLI
Ga0187773_111739482	3300018064	Tropical Peatland	DLAFEITFARNLVPRRPGRRYERKTKRPGGRYKTQKPGETARLTPLTRIVFWLIPVHLNLMP
Ga0187772_102103381	3300018085	Tropical Peatland	MRSAGGSATRVRFPPPELDDALADLAFEITFPRNLVPDRPGRSYARETKRPGGRYKTRKHGQSSRLTPLTVIKFWLMPAPT
Ga0187772_107122803	3300018085	Tropical Peatland	DGLAATAADLAYEITFARNLVPRRPGRRYERKTKRPGGRYKTRKPGETAQLTPLTRIVFWLMPVPA
Ga0187770_106887672	3300018090	Tropical Peatland	MRSAGGSATRVPFPPPELDDALADLAFEITFPRNLVPDRPGRSYARETKRPGGRYKTRKHGQSSRLTPLTVIKFWLMPAPT
Ga0066655_104830941	3300018431	Grasslands Soil	VTGSAAASATPDAFPPDGLAAAVADLAFEITFARNLVPRRPGRRYERKTKRPGGRYKTRKGHETTRLTPLTRIIYWLMPIPA
Ga0066662_105648101	3300018468	Grasslands Soil	ADLAAEITWHRHLVPRRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTKITFWLMPVPA
Ga0193722_10816822	3300019877	Soil	VTPSAAASATPDAFPPDRLGDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYKTAKPGQTTRLTPLTRIVFWLMPVPSLI
Ga0210384_117088551	3300021432	Soil	PALATPSGAASATPEAFPPHGLDELTADLAFEITFHRNLVPGRPGRRYERKTKRPGGRYKTRKPGQTALLTPLTKIVFWLMPVPP
Ga0187846_101886992	3300021476	Biofilm	VTPSAAASATPDAFPPDRLADLAADLAFEITFRRNLVPERPGRRYERKTKRPGGRYKTRKPGETTQLTPLTKIIFWLMPAPSLI
Ga0228598_10631241	3300024227	Rhizosphere	MRSGAASATRVPFPPQELDLAVGDLAFELTCKRSLTGQRPGRRYARETKRPGGRYKTRKPGQTSRLTPLTRVVFWLMPTPALT
Ga0208356_10481481	3300025504	Arctic Peat Soil	PPEHLDDLAADLAFEITFHRNLVPGRPGRRYERKTKRPGGRYKTRKPGQAARLTPLTPLTPLTRIVFWLPPVPA
Ga0208586_11060432	3300025588	Arctic Peat Soil	PEHLDDLAADLAFEITFHRNLVPLRPGRRYQRKTKRPGGRYKTRKPGETTRLTPLTRIVFWLMPVPA
Ga0208589_10562883	3300025634	Arctic Peat Soil	TRCGSPSPSHARQSAAASATPDAFPPPLLDELAAGLAAEITYHRHLVPSRPGRRYERKAKRPGGRYKTRKHGEATRLTPLTKVVFWLMPIPP
Ga0207692_111267982	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PVTPSAAASATPDAFPPDPLDDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYRTAKPGETTRLTPLTRIVFWLMPVPSLI
Ga0207684_103649754	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	APATESAAASATPEAFPPDRLADLAADLAFEITFHRNLVPRRPGRRYERQTKRPGGRYKTRKPGETARLTPLTKIVFWLIPVPA
Ga0209839_100471552	3300026294	Soil	VPATGSAAVSATPDAFPPDGLALSAADLAFEITCQRNLVPERPGRRYERKTKRPGGRYKTRKPGHSGRLTPLTVVIFWLMPVPVLT
Ga0257160_10065231	3300026489	Soil	VTGSAAASATPDAFPPDRLGDLTADLAFEITFARNLVPSRPGRRYQRKTKRPGGRYKTRKPGETARLTPLTRIVFWLMPVPSLT
Ga0207726_10444501	3300027045	Tropical Forest Soil	PPQELDEALAGLAFEITFSRNLVPGRPGRRYARQTKRSGGRYKTRRHGQSSRLTPLTVIKFWPLPVPP
Ga0208043_10487072	3300027570	Peatlands Soil	PPPLLDELAADLAAQITWHRHLVPHRPGRRYERKTKRPGGRYKTRKPGETTRLTPLTKIVFWRIPIPT
Ga0209655_101606521	3300027767	Bog Forest Soil	AFPPDRLSDLTADLAFEITFARNLVPRRPGRRYERKTKRPGGRYKTRKPGQTAQLTPLTRIVFWLMPVPA
Ga0209139_100461813	3300027795	Bog Forest Soil	LAFEITFARNLVPRRPGRRYERRTKRPGGRYKTRNPGETAQLTPLTRIVFWLMPVPA
Ga0209040_100977782	3300027824	Bog Forest Soil	VADLAFEITFARNLVPRRPGRRYERKTKRPGGRYKTRKPGETAQLTPLTRIIFWLMPVPA
Ga0209040_104989211	3300027824	Bog Forest Soil	ATESAAASATPDAFPPDSLGDLAADLAFEITFARNLVPQRPGRRYERKTKRPGGRYKTRKPGQPARLTPLTRVVFWLMPIPNLT
Ga0209180_102807161	3300027846	Vadose Zone Soil	LAADLAFEITFARNLVPGRPGRRYERKTKRPGGRYKTRRPGETARLTPLTRIVFWLMPVP
Ga0209590_100059885	3300027882	Vadose Zone Soil	VAREAVRNRMSDSGCFPPHHLDELAADLAAEITYHRRLVPHRPGRRYERKTKRPGTRYKTRKPGETTRLTPLTKIVFWLMPVSCLT
Ga0307282_100664411	3300028784	Soil	VTPSAAASATPDAFPPDRLGDLAADLAFEITFKRNLVPERPGRRYERKTKRPGGRYKTARPGQTTRLTPLTRIVFWLMPVPSLI
Ga0311340_108216222	3300029943	Palsa	FPPDSLGDLAADLAFEITFARNLVPQRPGRRYERKTKRPGGRYKTRKPGEPARLTPLTRVVFWLMPVPNLT
Ga0310686_1043408932	3300031708	Soil	MRSGAASATRVPFPPQELDLAVGDLAFELTCKRSLTGQRPGRRYARETKRPGGRYKTRKPGQTSRLTPLTRVVFWLMPVPALT
Ga0310686_1060291461	3300031708	Soil	LAAEITYHRHLVPRRPGRRYERKTKRPGGRYKTRKHGEATRLTPLTKVVFWLMPIPT
Ga0310686_1187634641	3300031708	Soil	MRSGAASATLAPFPPQELDQAVGDLSFELTCKRSLVDQRPSRRYARETKRPGGRYKTRKPGQTSRLTPLTRVVFWLMPTPALT
Ga0311301_106494921	3300032160	Peatlands Soil	QTPGRSPSPGPATQSGAASATPDPFPPQGLDELAADLAFEITYHGNLVPARPGRRYERKTKRPGGRYKTRKPGDNSRLTPLTKIVFWLMPIPP
Ga0311301_106888353	3300032160	Peatlands Soil	GLAATVADLAFEITFARNLVPSRPGRRYERKTKRPGGRYKTRKPGQTAQQTPLTRIVFWLMPVPA
Ga0335079_101949233	3300032783	Soil	VKESAAASATPAAFPSDGLAHSAEDLAFEITRQRNLVPERPGRRYERKAKRRGGRYKTRKPGQTARLTPVTRIIFWLLPLLA
Ga0335079_102153511	3300032783	Soil	PVLDQLAADLAAQITWHRNLVPARPGRRYERKTKRPGGRYKTRKPGEIIRLTPLTQIIFWRMPVPA
Ga0335079_102436974	3300032783	Soil	DQLAADLAAQITWHRNLVPARPGRRYERKTKRPGGRYKTRKPGETTRLTPLTEIIFWRMPVPA
Ga0335078_108797202	3300032805	Soil	ARPSAAASATPDAFPPPLLDQLAADLAAQITWHRNLVPARPGRRYERKTKRPGGRYKTRKPGETTRLTPLTEIIFWRMPVPA
Ga0335081_105072881	3300032892	Soil	DLTADLAFEITFARNLVPRRPGRRYERKTKWPGGRYKTARPGETTRLTPLTRIVFWLMPVPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080461

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences