Metagenome / Metatranscriptome Family F080452

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080452
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	118 residues
Representative Sequence	MKVKRSALLGLLVCLTAATAAAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSIGLGLTDHWSIFVSAGADRFESRGGWRGG
Number of Associated Samples	103
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	93.04 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.435 % of family members)
Environment Ontology (ENVO)	Unclassified (21.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.870 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 12.86% β-sheet: 32.14% Coil/Unstructured: 55.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02075	RuvC	14.78
PF01103	Omp85	6.96
PF14332	DUF4388	5.22
PF01709	Transcrip_reg	1.74
PF07244	POTRA	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	14.78
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	1.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.48 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	85.22 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.48 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	1.74 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	85.22 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.48 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	1.74 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	85.22 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	2.61 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	1.74 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	85.22 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	2.61 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	1.74 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	85.22 %
Geoalkalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geoalkalibacter	1.74 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1.74 %
Unclassified	root	N/A	1.74 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	85.22 %
Geoalkalibacter ferrihydriticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geoalkalibacter → Geoalkalibacter ferrihydriticus	1.74 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1.74 %
Unclassified	root	N/A	1.74 %
Geobacter sulfurreducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter sulfurreducens	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003371\|JGI26145J50221_1007154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300003504\|JGI26138J51218_105113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005171\|Ga0066677_10703745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300005180\|Ga0066685_10488249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300005186\|Ga0066676_10300982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300005294\|Ga0065705_10306775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300005347\|Ga0070668_100514990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300005367\|Ga0070667_100902016	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005406\|Ga0070703_10277260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005444\|Ga0070694_101397225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geoalkalibacter → Geoalkalibacter ferrihydriticus	591	Open in IMG/M
3300005447\|Ga0066689_10439047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300005471\|Ga0070698_101748185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005471\|Ga0070698_101944852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005518\|Ga0070699_100415812	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300005518\|Ga0070699_101449801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geoalkalibacter → Geoalkalibacter ferrihydriticus	629	Open in IMG/M
3300005526\|Ga0073909_10445517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005536\|Ga0070697_100152954	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300005536\|Ga0070697_101916491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005598\|Ga0066706_10963888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005617\|Ga0068859_100127093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2619	Open in IMG/M
3300005764\|Ga0066903_100757617	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300005764\|Ga0066903_102542403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300005842\|Ga0068858_100164499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2090	Open in IMG/M
3300005938\|Ga0066795_10062243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300005993\|Ga0080027_10094462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300005995\|Ga0066790_10316554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter sulfurreducens	666	Open in IMG/M
3300006172\|Ga0075018_10338446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300006173\|Ga0070716_100117627	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300006575\|Ga0074053_11898958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	882	Open in IMG/M
3300006794\|Ga0066658_10759661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300006796\|Ga0066665_11316084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006854\|Ga0075425_101431873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300006904\|Ga0075424_100036712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	5090	Open in IMG/M
3300006904\|Ga0075424_101544355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300007076\|Ga0075435_100030198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	4259	Open in IMG/M
3300009038\|Ga0099829_11013421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300009137\|Ga0066709_104223462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300010046\|Ga0126384_10847067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300010361\|Ga0126378_13241278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300010366\|Ga0126379_12483469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300010366\|Ga0126379_12765106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010373\|Ga0134128_12470837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300010397\|Ga0134124_10688423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300010398\|Ga0126383_13588588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300011269\|Ga0137392_10938754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300011270\|Ga0137391_10239555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1574	Open in IMG/M
3300012199\|Ga0137383_10745236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300012201\|Ga0137365_10574968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300012353\|Ga0137367_10631430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300012360\|Ga0137375_11236885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012363\|Ga0137390_10593837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300012479\|Ga0157348_1017082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300012484\|Ga0157333_1026361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300012532\|Ga0137373_10306223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300012930\|Ga0137407_12044447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012931\|Ga0153915_12138069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012948\|Ga0126375_11981528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012958\|Ga0164299_11461967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012960\|Ga0164301_11711015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012961\|Ga0164302_10979172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300012971\|Ga0126369_10251631	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300012977\|Ga0134087_10396946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300012986\|Ga0164304_10175997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300012987\|Ga0164307_11249839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012989\|Ga0164305_12068630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300014154\|Ga0134075_10292542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300015075\|Ga0167636_1024983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300015085\|Ga0167632_1013627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300015162\|Ga0167653_1011235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1801	Open in IMG/M
3300015357\|Ga0134072_10260600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300015372\|Ga0132256_102482411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300015373\|Ga0132257_101910146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300017927\|Ga0187824_10374403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300018054\|Ga0184621_10170158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300018059\|Ga0184615_10691824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018063\|Ga0184637_10445244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300018071\|Ga0184618_10295328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300018075\|Ga0184632_10129897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300018075\|Ga0184632_10161740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300018075\|Ga0184632_10407113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300018431\|Ga0066655_10269299	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300018431\|Ga0066655_10451123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300021081\|Ga0210379_10489557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300021560\|Ga0126371_13062472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300022694\|Ga0222623_10047823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1645	Open in IMG/M
3300025910\|Ga0207684_10494908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300025911\|Ga0207654_11333018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300025919\|Ga0207657_10991210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300025922\|Ga0207646_10664880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300025935\|Ga0207709_11851153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300025939\|Ga0207665_11203564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300026294\|Ga0209839_10220010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300026537\|Ga0209157_1119918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300026540\|Ga0209376_1248960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300027462\|Ga0210000_1020540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300027471\|Ga0209995_1009866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1547	Open in IMG/M
3300027480\|Ga0208993_1054632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300027587\|Ga0209220_1042270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1219	Open in IMG/M
3300027665\|Ga0209983_1052703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300027682\|Ga0209971_1012491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2009	Open in IMG/M
3300027846\|Ga0209180_10672984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300027873\|Ga0209814_10489141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300028803\|Ga0307281_10173695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300030606\|Ga0299906_11056192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300031720\|Ga0307469_10163569	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300031740\|Ga0307468_100692387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300031820\|Ga0307473_10475482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300032180\|Ga0307471_100035386	All Organisms → cellular organisms → Bacteria	3917	Open in IMG/M
3300032180\|Ga0307471_100374283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300032180\|Ga0307471_102912309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300033433\|Ga0326726_11114334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300033814\|Ga0364930_0110451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300034090\|Ga0326723_0144436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.61%
Host-Associated	Host-Associated	17.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.30%
Plants	Host-Associated → Plants	17.39%
Aquatic	Environmental → Aquatic	11.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.57%
Sediment	Environmental → Aquatic → Sediment	8.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.83%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Peat	Environmental → Terrestrial → Peat	1.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.43%
Loam	Environmental → Terrestrial → Soil → Loam	14.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.22%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.22%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Glacier Forefield Soils	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils	0.87%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003504	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015075	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26145J50221_10071541	3300003371	Arabidopsis Thaliana Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGLGLTDRWSVFASAGWEERES
JGI26138J51218_1051132	3300003504	Arabidopsis Thaliana Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGLGLTDRWSVFASAGWEERESRGGWE
Ga0066677_107037451	3300005171	Soil	MKANRKALLGLLVCLGSAVASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGLYGWKEQLQAGNLAFTDSPDRSRLYSHWAGEASIGLGLTRGWAVFFSAGEDRFESRG
Ga0066685_104882491	3300005180	Soil	MKVKRSALLGLLVCLTAATAAAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSIGLGLTDHWSIFVSAGADRFESRGGWRGGVVNGLQFRSDFDSDEGRKVRIGTKVNFFSEADSDL
Ga0066676_103009821	3300005186	Soil	MKVKRAALLGLLVCLVGATASAQLAPNNQGDIGLFTMPTADSPQAGHWTFGLYGWKEQLIAGDLAFTDTEIRRRLYSHWAFEGSLGIGLTEHWSAFASAGEERFESRGGWTGGSINSIQIRSHFLADEARKI
Ga0065705_103067752	3300005294	Switchgrass Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHTTRLYNHWAVAGSVGMGLTDRWSIFASAGWEERESRGGW
Ga0070668_1005149902	3300005347	Switchgrass Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTDRWSVFAS
Ga0070667_1009020162	3300005367	Switchgrass Rhizosphere	MKVKRAALLGLLACLIGASASAQIAPNNSGDIGLFTMPSADTPRAGMLTFGVYGWKEQLIAGNLAFSDTDTRRRLYSHWAGEASIGLGLTD
Ga0070703_102772602	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTDRWSVFASAGW
Ga0070694_1013972251	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKVKRAALLGLLACLIGASASAQIAPGNSGDIGLFTMPTADTPRAGMLTFGVYGWKEQLIAGNLAFTDTDTRRRLYSHWAGEASIGLGLTDHWTVFASAGEEKFQSRGGWLGGALNSNQIFTRFDADEPRKIRIG
Ga0066689_104390471	3300005447	Soil	MKVKRAALLGLLVCLVGATASAQLAPNNQGDIGLFTMPTADSPQAGHWTFGLYGWKEQLIAGDLAFTDTEIRRRLYSHWAFEGSLGIGL
Ga0070698_1017481851	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKANRKALLGLLVCLGSAVASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGFYGWKEQLGAGNLAFTDAPDRTRLYSHWAGEGSIGLGLTRGWAVFVSAGEDRFESRGGWRGGAVNSISFPSGFRADEPRKVRFGTKVRLISETDSRLTLAFFLSTQVPVGHANIH
Ga0070698_1019448521	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKAKRAALLGLLVCLIGATASAQIAPNNQGDIGLFTMPTADTPRAGYWTFAVYGWKEQLIAGNLAFENTEARSRLFSHWAAEGSLGIGLTDHWSLFASAGEERFESRGGWR
Ga0070699_1004158121	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKVKRAALLGLFACLIGASASAQIAPSAQGDIGLFTMPTADTPHAGQLTFGLYGWKEQLIAGNLAFSDTEFRHRLYSHWAGEASVGLGLTENWTIFASAGE
Ga0070699_1014498011	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKVKRAALLGLLACLIGASASAQIAPGNQGDIGLFTMPTADTPRAGMITFGVYGWKEQLVAGNLAFSDTEQRLRLYSHWAGEASIGIGLTDNWTRFASAGEEKFQSRGGWRGGALNSVQIFSRFDADEPRKIRIGTKYKFVSESDPNF
Ga0073909_104455171	3300005526	Surface Soil	MKAKRAALLGLVLCTFGATASAQLAPTLTGDIGLFTIPTADTPLAGHWTFGAYGWKEQLIAGNLAFQDTDFRSRLYNHWAGEGSIGVGVTENWTIFASAGVERFESRGGWTGGAINSVQIFGHFKADEARKIRIGTKYRFLPEGGDSDFR
Ga0070697_1001529541	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKVKRSALLALLVCLPAATASAQIAPNNQGDVGLFTMPTADSPGAGQLTLGLYGWKEQLVAGDLPTDAPQKTRLYSHWAGEGSIGFGLTNHWSFFLS
Ga0070697_1019164911	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELTTDGNEKTRVYNHWAGAGSIGFGLTDRWSIFASAGWEDRKSRGGWRGGFVNGLLF
Ga0066706_109638882	3300005598	Soil	MKVKRSALLGLLVCLTAATAAAQIAPNNQGDIGLFTMPTADNPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSIGLGLTDHWSIFVSAGADRFESRGGWRGGVVNGLQFRSDFDSD
Ga0068859_1001270931	3300005617	Switchgrass Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTDRWSVFASAGWEERESRGGW
Ga0066903_1007576171	3300005764	Tropical Forest Soil	MKLRRSALAGMLVCLGAATASAQVAPNNQGDIGLFTMPNADSPRPGQLTLGLYGWKEQLTAGNLPFSNTDERSRLYSHWAGEGSLGIGLAANWSAFVSAGAERFESRGGWKGGSINSISFPTHFTADEPRKIRIGTKYVFTSPDASLRVGI
Ga0066903_1025424032	3300005764	Tropical Forest Soil	MKATRAALLGLVLCTFGATASAQLAPTLSGDIGLLTMPSADTPLAGHWTFGAYGWKEQLIAGDLALQNNDFNQRLYSHWAGEGSIGVGITDNWTMFLSAGAERYQSRGGWTGGAINSVQIFGHFKADEARKI
Ga0068858_1001644992	3300005842	Switchgrass Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTDRWSVFASAGWEERESRGGWRG*
Ga0066795_100622432	3300005938	Soil	MKVKRAALLGLLVCLIGASASAQIAPNAQGDIGLFTMPSADTPHMGQLTFGLYGWKEQLVAGNLAFSDTEMRLRLYSHWAGEASLGLGLTENWTVFASAGEEKFQSRGGWLGGALNSVQIVGHFDADESRKIRIGSKY
Ga0080027_100944622	3300005993	Prmafrost Soil	MKAKRMALLGMLVCMIGAVASAQIAPSTSGDIGLFTIPTADTPRAGQLTLGVYGWKEQLAAGNLAFSNTDFRSRQYSHWAGEVSLGFGLMDDWEIFASGGAERFESRGGWRGGSLNSIQFFGPFRAD
Ga0066790_103165541	3300005995	Soil	MKAKRTALLAMLVCLIGAAASAQIAPSTSGDIGLFTIPTADTPRAGQLTLGVYGWKEQLGAGNLAFTDTDFRSRLYAHWAGEGSLGFGLTDDWEIFASGGAERFESRGGWRGGSLNSIQLFGP
Ga0075018_103384461	3300006172	Watersheds	MKAKRTALLGILVCLIAAAASAQIAPSSTGDIGLFTIPTADTPRAGQLTLGVYGWKEQLVAGDLAFQNVDFRNRLYSHWAGEGSLGLGLTDNWEVWVSGGADRFESRGGWRGGALNSVQFFSRF
Ga0070716_1001176271	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKANCKALFGLIVCLSSAVASAQITPDNRGEIGLFTMPSADTARPGQVTLGLYGWKEQLVAANLVGVDNPDRNRLFSHWAGELSFGLGLTRNWDA
Ga0074053_118989581	3300006575	Soil	MKAKRAALLGLVLCTFGATASAQLAPTLTGDIGLFTIPTADTPLAGHWTFGAYGWKEQLIAGNLAFQDNDFRHRLYSHWAGEGSIG
Ga0066658_107596611	3300006794	Soil	MKVKRSALLALLVCLTAAIASAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSLGLGLTDHWSIFVSAGADRFESRGGWRGGVVNGLQFHTAFDSDEGRKVRIGTKVNFISEADSDLRVA
Ga0066665_113160841	3300006796	Soil	MVVKRTALLAVLVCLAGVPASAQIAPGNTGDIGLFTMPTGDQPRAGTVTFSLYGWKEQLVAGNLALTDTEMRRRLYSHWAGEGSLGIGLTDRWSVFASAGEERFESRGGWLGGSLNSIQIRGRFEADEPRKIF
Ga0075425_1014318732	3300006854	Populus Rhizosphere	MKANCKALFGLILGLSSAVASAQIAPSNQGDVGLFTMPTADTARPGQFTLGLYGWKEQLVAANLAFQDNEDRTRLYSHWAGEISFGLGLTRNWDAFISAGAERFENRGGWQ
Ga0075424_1000367126	3300006904	Populus Rhizosphere	MKVKRAALLPLLFCLAGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAAEGS
Ga0075424_1015443551	3300006904	Populus Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYG
Ga0075435_1000301986	3300007076	Populus Rhizosphere	MKVKRSALLALLVCLPAATASAQIAPNNQGDIGLFTMPTADSPRAGQLTLGLYGWKEQLVAGDLPTDAPQKTRLYSHWAGEGSIGFGLTNHWSLFL
Ga0099829_110134211	3300009038	Vadose Zone Soil	MKVKRAALVGLLACLIGASASAQIAPSNQGDIGLFTIPSADSPRAGTLTFGLYGWKEQLVAGNLAFTDTEMRHRLYNHWAGEASLGLGVTDRWTVFASAGEEKFQNRGGWLGGALNGVQIRTPFDADEPRKIRIGTKYGFVSEADPDF
Ga0099829_115987811	3300009038	Vadose Zone Soil	MVVKRTALLAVLVCLAGAPASAQIAPGNTGDIGLFTMPTGDQPRAGTVTFSLYGWKEQLVAGNLAFTDTEMRRRLYSHWAGEGS
Ga0066709_1042234621	3300009137	Grasslands Soil	MKVKRAALLGLLVCLVGATASAQLAPNNQGDIGLFTMPTADSPQAGHWTFGLYGWKEQLIAGDLAFTDTEIRRRLYSHWAFEGSLGIGLTEHWSAFASAGEERFESRGGWTGGSINSIQIRSHFLADEARKIRIGTKYNFFSEADPSFRVAIWGAGN
Ga0126384_108470671	3300010046	Tropical Forest Soil	MKAKRAALLGLLVCLTAATASAQLAPNSQGDIGLFTMPSADTPLAGHLTFGLYGWKEQLIAGNLAFANTEQQSRLYKHWAGEGSLGFGLTDNWTIFASAGEERF
Ga0126378_132412781	3300010361	Tropical Forest Soil	MKANRRAFLGLLVCLSSAVATAQMAPSNKGDIGLFTMPSADTPAAGSLFGGLYGWKEQLVAGNLAFTDTQDRSRLFSHWVGAGSIGLGLTNGWDFYMSFGEQRFESRGGWTGGAVNSISFPTHFESNEPTKLWFGTKVRLVSELDSNLRVG
Ga0126379_124834691	3300010366	Tropical Forest Soil	MKANRKALLGLIVCASSAIASAQIAPNNQGDIGLFTMPSADSPRVGQFTLGLYGWKEQLTAANLAFQNTPDQTRLYSHWAGALSFGLGLTNHWNVFIDAGGERYESRGG
Ga0126379_127651061	3300010366	Tropical Forest Soil	MKANRRAFLGLLVCLSSAVATAQMAPSNKGDIGLFTMPSADTPAAGSLFGGLYGWKEQLVAGNLAFTDTQDRSRLFSHWVGAGSIGLGLTNGWDFYMSFGEQRFESRGGWTGGAVNSISFPTHFESNEPTKLWFGTKVRLVSELDSN
Ga0134128_124708372	3300010373	Terrestrial Soil	MKVKRAALLGLLACLIGASASAQIAPNNSGDIGLFTMPSADTPRAGMLTFGVYGWKEQLIAGNLAFSDTDTRRRLYSHWAGEASIGLGLTDHWTVFGSAGE
Ga0134124_106884232	3300010397	Terrestrial Soil	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTDRWSVF
Ga0126383_135885881	3300010398	Tropical Forest Soil	MKAKRAALLGLVVSMFGATASAQLAPTLGGDIGLFTIPSADTPLAGHFTFGAYGWKEQLIAGNLAFSDTEFRSRLYSHWAGEGSFGFGFTDNWSMFLSAGEERFESRGGWTGGSINSIQIFGHFKADEARKIRI
Ga0137392_109387541	3300011269	Vadose Zone Soil	MKANRKALLGLLVCLGSAAASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGLYGWKEQLQAGNLAFTDSPDRSRLFSHWAGEGSIGLGLTRGWAVFVSAGEDRFESR
Ga0137391_102395551	3300011270	Vadose Zone Soil	MKANRKALLGLLVCLGSAAASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGLYGWKEQLQAGNLAFTDSPDRSRLYSHWAGEGSIGLGLTRGWAVFFSAGEDRFESR
Ga0137383_107452361	3300012199	Vadose Zone Soil	MKANRKALLGLLVCLGSAVASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGLYGWKEQLQAGNLAFTDSPDRSRLYSHWAGEGSIGLGLTRGWAVFFSAGEDRFESRGGWRGGAVNSISFRSGFRADEPRKVRIGTKVRLISETDSRLQVGLFLSGLV
Ga0137365_105749681	3300012201	Vadose Zone Soil	MKANRKALLGLLVCLGSAVASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGLYGWKEQLQAGNLAFTDSPDRSRLYSHWAGEGSIGLGLPRGWAVLFSAGEDRFASRG
Ga0137367_106314302	3300012353	Vadose Zone Soil	MKVKRSALLALFVCLAAATASAQIAPNNQGDIGLFTMPTADSPPAGQLTLGLYGWKEQLVAGDLPTDAPFETRLYSHWAGEGSIGFG
Ga0137375_112368851	3300012360	Vadose Zone Soil	MKANRKALLGLLVCLGSAAASAQVAPNNQGDIGLFTMPTADMPRPDQLTLGLYGWKEQLQAGNLAFTDSPDRSRLYSHWAGEGSIGLGLTRGWAVFVSAGEDRFESRGGWRGGAVNSVSFPSG
Ga0137390_105938371	3300012363	Vadose Zone Soil	MKANRKALLGLLVCLGSAAASAQVAPNNQGDIGLFTMPTADMPRAEQLTLGLYGWKEQLQAGNLAFTDSPDRSRLYSHWAGEGSIGLGLTRGWAVFISAGEDRFESRGGWRGGAVNSASFPS
Ga0157348_10170821	3300012479	Unplanted Soil	MKAKRTALLGILVCLIGAAASAQIAPSSTGDIGLFTIPTADTPRAGQFTLGLYGWKEQLVAGDLAFADVDFQHRLYSHWAGEASFGFGFTDNWEVWVSGGVDRFESRGGWRGGSLNSIQFFGPF
Ga0157333_10263611	3300012484	Soil	MKAKRTALLGILVCLIGAAASAQIAPSSTGDIGLFTIPTADTPRAGQFTLGLYGWKEQLVAGDLAFADVDFQHRLYSHWAGELSLGFGFTDNWEVWASGGAERFESRGGWRGGSLNSIRFFGPFTADEPRKLEIGTKYRIYSE
Ga0137373_103062231	3300012532	Vadose Zone Soil	MKVKRSALLALFVCLAAATASAQIAPNNQGDIGLFTMPTADSPPAGQLTLGLYGWKEQIVAGDLPTDAPFETRLYSHWAGEGSIGFGLTN
Ga0137407_120444471	3300012930	Vadose Zone Soil	MKVKRAALLGLLACLVGASASAQIAPGNTGDIGLFTMPTADTPRAGMLTFGVYGWKEQLIAGNLAFSDTDTRRRLYSHWAGEASIGLGLTDHWTVFGSAGEEKFQSRGGWRGGALNSVQI
Ga0153915_121380691	3300012931	Freshwater Wetlands	MKVKRSALLSLLFCLAGASAFAQIAPSNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGFGLTDHWSIFASPGWEMRKSRGGWEGGIVNGLTFRAPFRIDEGRKVRIG
Ga0126375_119815281	3300012948	Tropical Forest Soil	MKAKRAALLGLLVSLTGATASAQLAPNAQGDIGLFTMPTADTPLPGHFTFGLYGWKEQLIAGNLAFENTEQQSRLYKHWAYEGSLGIGLTENWTIFASAGEERFESRGGWTGGSINSIQIHGHFKADEPRKIRIGTKYRAYSEADSDFRV
Ga0164299_114619671	3300012958	Soil	MKAKRTALLGILVCLIGAAASAQIAPSSTGDIGLFTMPTADTPRGGQLTLGVYGWKEQLVAGDLAFADVDFQHRLYSHWAGELSLGFGFTDNWEVWASGGADRFESRGGWRGGALNSIRFFGPFR
Ga0164301_117110151	3300012960	Soil	MKVKRAALFGLLACLIGAPASAQLAPSAQGDIGLFTMPTANTPRSGFLTFGLYGWKEQLVAGNLAFSDTDFRRRLYSHWAGEASMGIGLTDDWTMFASVGEEKFQSRGGWLG
Ga0164302_109791721	3300012961	Soil	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELTTDGDQVTRLYNHWAVAGSVGYGLTDRWSIFASAGWEERESRGG
Ga0126369_102516313	3300012971	Tropical Forest Soil	MKAKRAALLGLVVSMFGATASAQLAPTLGGDIGLFTIPSADTPLAGHFTFGAYGWKEQLIAGNLAFSDTEFRSRLYSHWAGEGSFGFGFTDNWSMFL
Ga0134087_103969461	3300012977	Grasslands Soil	MKVKRSALLGLLVCLTAATAAAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSLGLG
Ga0164304_101759971	3300012986	Soil	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELTTDGDQVTRLYNHWAVGGSVGYGLTDRWSIFASGGWEERESRGGWRGG
Ga0164307_112498391	3300012987	Soil	MKAKRTALLGILVCLIGAAASAQIAPSSTGDIGLFTMPTADTPRGGQLTLGVYGWKEQLVAGDLAFADVDFQHRLYSHWAGELSLGFGFTDNWEVWASGGADRFESRGGWRGGALNSIRFFGPFRADEP
Ga0164305_120686301	3300012989	Soil	MKVKRAALFGLLACLIGAPASAQLASNNQGDIGLFTMPTADTPRAGLLTFGVYGWKEQLVAGNLAFSDTDFRRRLYSHWAGEASMGLGLTENWTMFASAGEEKFQ
Ga0134075_102925421	3300014154	Grasslands Soil	MKVKRAALLGLLVCLVGATASAQLAPNNQGDIGLFTMPTADSPQAGHWTFGLYGWKEQLIAGDLAFTDTEIRRRLYSHWAFEGSLGIGLTEHWSAFASAGEERFESRGGWTGGSINSIQIRSHFLADEARKIRIGTKYNFFSEADPSFRVAIWGAGNIPISQSS
Ga0167636_10249831	3300015075	Glacier Forefield Soils	MKAKRTALLGILVCLTGAAASAQIAPSNQGDIGLFTMPTADTARAGQLTLGVYGWKENLVAGQLAFSDTNYRNRLYAHWAGEGSIGLGLMDDWDISASAGTERFESRGGWRGGSLNGIQFFGRFRADEPRKIRIATKYRIYSEADNGFRLGLWLAAHIP
Ga0167632_10136272	3300015085	Glacier Forefield Soil	MKAKRTALLGMFVCLIGAAASAQIAPNTSGDIGLFTIPTADVPRAGQLTLGVYGWKEQLAAGNLAFSNTDFRSRLYSHWAGEGSIGLGLTEDWTVNISAGGERFENRGGWRGG
Ga0167653_10112354	3300015162	Glacier Forefield Soil	MKVKRAALLGLLACLIGASASAQIAPNNQGDIGLFTMPSADTPRAGMLTFGLYGWKEQLIAGNLAFSDTDARRRLYSHWAGEASVGIGLTDHWTVFASAGEEKFQSRGGWLGGALNSVQINGRFDADEPRKIRFGTKYKFVSESDPSF
Ga0134072_102606002	3300015357	Grasslands Soil	MKVKRSALLGLLVCLTAATAAAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSIGLGLTDHWSIFVSAGADRFESRGGWRGG
Ga0132256_1024824111	3300015372	Arabidopsis Rhizosphere	MKAKRTALLGILVCLIGAAASAQIAPSSTGDIGLFTIPTADTPRAGQFTLGLYGWKEQLVACDLAFADVDFQHRLYSHWAGELSLGFGFTDNWEVWASGGAERFESRGG
Ga0132257_1019101462	3300015373	Arabidopsis Rhizosphere	MKAKRAALLSLVLCTFGATASAQLAPTLTGDIGLFTIPTADTPLAGHWTFAAYGWKEQLIAGNLAFQDTDFRSRLYNHWAGEGSIGVGVTENWTIFASAGEERFESRGGWAGGAINSVQIFGHFKADEARKIRIGTKYRFLPEGGDSDFRLGLWLATNIPISHTTVEKGESD
Ga0187824_103744031	3300017927	Freshwater Sediment	MKVRRAALLGLLVCLGGASASAQIAPNNQGDVGLFTMPSADTPRAGQFTFGLYGWKEQLVAGNLAFTDTEMRSRLYSHWAGEGSLGIGLTDHWTIFASAGEEKFESRGG
Ga0184621_101701582	3300018054	Groundwater Sediment	MKAKRSALLALVFCLVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELQTDADHLTRLYNHWAVEGSVGFGLTDRWSIFASAGWEDRKSRGGWRGGFVNGLLFREHFDVDEGRKL
Ga0184615_106918241	3300018059	Groundwater Sediment	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGMGLTDRWSIFASAGWDERESRGGWRGGIVNGLTLVPAFRV
Ga0184637_104452442	3300018063	Groundwater Sediment	MKAKRTAPLGLLLCLFGAAASGQLAPNNQGDVGLFTMPTADGPRAGQFTLGLYGWKEQLVAGGLPGDPPWKTRLYSHWAGDGSIGLGLTDRWSIFASAGAERFESRGGWRGGVVNGLQIFNRFREDEGRKLRIG
Ga0184618_102953281	3300018071	Groundwater Sediment	MKAKRSALLALVLCLVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELTTDGNEKTRVYNHWAGEGSVGFGLTDRWSIVGSAGWEGRKSRGGWRGGFVHGLLLRPPFGVR
Ga0184632_101298971	3300018075	Groundwater Sediment	MKAKRSALLALVFCLVGAYAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHLTRLYNHWAAAGS
Ga0184632_101617402	3300018075	Groundwater Sediment	MKVKRSALLALLVCLAAATASAQIAPNNQGDIGLFTMPTADSPRAGQLTLGLYGWKEQLVAGDLPTDAPYRTRLYSHWAGEGWIGFGLTSHWSVFLSAGADRFESRGGWRGGVVNGLQFRDALSSDEGRKVRIGT
Ga0184632_104071131	3300018075	Groundwater Sediment	MKAKRSALLALVFCLVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHLTRLYNHWAAAGS
Ga0184633_100663242	3300018077	Groundwater Sediment	MKAKRTAPLGLLLCLFGAAASGQLAPNNQGDVGLFTMPTAHGPRAGQFTLGLYGWKEQLVAGGLPGDPPWKTRLYSHWAGDGSIGLGLTDRWSIFASAGSERFESRGGWRGGVVNGLQIFNRFREDEGRKLRIGTKVNFISEADAELRVAAWTAALIPVGNAT
Ga0066655_102692991	3300018431	Grasslands Soil	MKVKRAALLGLLVCLVGATASAQLAPNNQGDIGLFTMPTADSPQAGHWTFGLYGWKEQLIAGDLAFTDTEIRRRLYSHWAFEGSLG
Ga0066655_104511231	3300018431	Grasslands Soil	MKVKRSALLGLLVCLTAATASAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSIGLGLTDHWSIFVSAGADRFESRGGWRGGVVNGLQFRSDFDSDEGRKVRIGTKVNFF
Ga0210379_104895571	3300021081	Groundwater Sediment	MKAKRSALLALVFCLVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHLTRLYNHWAVEG
Ga0126371_130624721	3300021560	Tropical Forest Soil	MKANRRAFLGLLVCLSSAVATAQMAPSNKGDIGLFTMPSADTPAAGSLFGGLYGWKEQLVAGNLAFTDTQDRSRLFSHWVGAGSIGLGLTNGWDFYMSFGEQRFESRGGWTGGAVNSISFPTHFESNEPTKLWFGTKVRLVSELDSNLRVGLFLAAGVPVG
Ga0222623_100478232	3300022694	Groundwater Sediment	MKAKRSALLALVLCLVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHLTRLYNHWAVEGSVGMGLTDHWSIFASAGWEDRKNRGGWRGGIVNGLT
Ga0207684_104949082	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKVKRSALLALLVCLPAATASAQIAPNNQGDVGLFTMPTADSPGAGQLTLGLYGWKEQLVAGDLPTDAPLKTRLYSHWAGEGSIGFGLTNHWSFFLSAGADRYESRGGW
Ga0207654_113330182	3300025911	Corn Rhizosphere	MKVKRAALLGLLACLIGASASAQIAPNNSGDIGLFTMPSADTPRAGMLTFGVYGWKEQLIAGNLAFSDTDTRRRLYSHWAGEASIGLGLTLLA
Ga0207657_109912102	3300025919	Corn Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTD
Ga0207646_106648801	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKANRKALLGLLVCLTSAAASAQIAPNNQGDIGLFTMPTADTPLAGQLTLGLYGWKEQLIAGNLAFTDTNDRSRLYSHWAGEASIGLGLTRGWTIFASAGEDRFESRGGWRGGAINSIQFPGSFRADEPRK
Ga0207709_118511531	3300025935	Miscanthus Rhizosphere	MKAKRSALLALVFCMVGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHVTRLYNHWAVAGSVGYGLTDRWSVFASAGWEERESRGGWRGGIVNGLRFLGPFTIDEGRKVRIGT
Ga0207665_112035641	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKANRKALLGLLVCLTSAAASAQIAPNNQGDIGLFTMPTADTPLAGQLTLGLYGWKEQLIAGNLAFTDTNDRSRLYSHWAGEASIGLGLTRGWTIFASAGEDRFESRGGWRGGAINSIEFPGSFRADEPRKVRFGTK
Ga0209839_102200101	3300026294	Soil	MKAKRTALLAMLVCLIGAAASAQIAPSTSGDIGLFTIPTADTPRAGQLTLGVYGWKEQLGAGNLAFTDTDFRSRLYAHWAGEGSLGFGLTDDWEIFASGGAERFESRGGWRGGSLNSIQLFGPF
Ga0209157_11199182	3300026537	Soil	MKVKRAALLPLLFCLAGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLIAGELPTDAAHKTRLYNHWAAEGSVGLGLTDHWSVFVSGGWEERKSRGGWRGGIVNGVRLIPPFNIDEGRKVRIG
Ga0209376_12489601	3300026540	Soil	MKVKRSALLGLLVCLTAATAAAQIAPNNQGDIGLFTMPTADSPRAGQLTLGFYGWKEQLVAGDLPIDAPFRTRLYSHWAGEGSIGLGLTDHWSIFVSAGADRFESRGGWRGGVVNGLQFRSDFDSDEGRKVRIGTKVNFFSE
Ga0210000_10205402	3300027462	Arabidopsis Thaliana Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGLGLTDRWSVFASAGWEE
Ga0209995_10098661	3300027471	Arabidopsis Thaliana Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGLGLTDRWSVFASAGWEER
Ga0208993_10546322	3300027480	Forest Soil	MKAKRTAFLGVLVCLIGAAASAQIAPSTSGSIGLFTMPTADTPRAGMLTLGVYGWKEQLVAGNLAFSDTDYRSRLYSHWAGEGSIGLGLTDNWEISVSGGEERFESRGGWRGGALSGIEL
Ga0209220_10422702	3300027587	Forest Soil	MKAKRTAFLGVLVCLIGAAASAQIAPSTSGSIGLFTMPTADTPRAGMLTLGVYGWKEQLVAGNLAFSDTDYRSRLYSHWAGEGSIGLGLTDNWEISVSGGEERFESRGGWRGGA
Ga0209983_10527032	3300027665	Arabidopsis Thaliana Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGLGLTDRWSVFASAGWEERESRGGWEGGI
Ga0209971_10124911	3300027682	Arabidopsis Thaliana Rhizosphere	MMAKRSALLSLLICLAGASAFAQIAPNNQGDIGLFTMPTADNPRGGQLTLGLYGWLERLVAGELPTDADHRTRLYNHWAVAGSVGLGLTDRWSVFASAGWEERESRGGWEGGIVNGLTLVPPFRIDEG
Ga0209180_106729841	3300027846	Vadose Zone Soil	MKANRKALLGLLVCLGSAVASAQVAPNNQGDIGLFTMPTADMPRTDQLTLGLYGWKEQLVAGNLAFTDSPDRSRLFSHWAGEGSIGLGLTRGWAVFVSAGEDRFESRGGWRGGAVNSVSFPSGFRADEPRKVRFGTKVRLISETDSRLQVGLFLSAQVPV
Ga0209814_104891411	3300027873	Populus Rhizosphere	MKVKRSALLALLVCLPAATASAQIAPNNQGDIGLFTMPTADSPRAGQLTLGLYGWKEQLVAGDLPTDAPQKTRLYSHWAGEGSIGFGLTNHWSLFLSAGADRYESRGGWRGGVVNGLQFRNALSSDEGRK
Ga0307281_101736951	3300028803	Soil	MKVKRAALLGLFACLIGASASAQIAPGAQGDIGLFTMPTADTPHMGQLTFGLYGWKEQLIAGNLAFTDTEFRHRLYSHWAGEASVGL
Ga0299906_110561921	3300030606	Soil	MQVKRAALLPLLFCLAGASAFAQIAPNNQGDIGLFTMPTADNPRAGQLTLGLYGWLERLVAGELPTDADHKTRLYNHWAVEGSVGLGLTERWSIFASAGWELRKSRGGWAGGIVNGLSLI
Ga0307469_101635693	3300031720	Hardwood Forest Soil	MKVKRAALLGLFACLIGASASAQIAPSAQGDIGLFTMPTADTPHAGQLTFGLYGWKEQLIAGNLAFSDTEFRHRLYSHWAGEASVGLGLTENWT
Ga0307468_1006923872	3300031740	Hardwood Forest Soil	MKAKRSALLALVFCLVGASAFAQIAPNNQGDIGLFTMPTADNPRAGQMTLGLYGWLERLVAGELPTDADHLTRLYNHWAFEGSVGMGLTDRWSIFASAGWEDRKSRGG
Ga0307473_104754822	3300031820	Hardwood Forest Soil	MKVKRAALLGLLACLVGASASAQIAPNNQGDIGLFTMPSADTPRAGMLTFGVYGWKEQLVAGNLAFSDTEQRRRLYSHWAGEASVGI
Ga0307471_1000353864	3300032180	Hardwood Forest Soil	MKVKRAALLGLFACLIGASASAQIAPSAQGDIGLFTMPTADTPHAGQLTFGLYGWKEQLIAGNLAFSDTEFRHRLYSHWAGEASVGLGLTENWTIFASA
Ga0307471_1003742833	3300032180	Hardwood Forest Soil	MKANCKALFGLIVCLSSAVASAQIAPSNQGDIGLFTMPTADTARPGQFTLGLYGWKEQLVAANLAFQDNEDRTRLYSHWAGEISFGLGLTRNWDVFLSGG
Ga0307471_1029123091	3300032180	Hardwood Forest Soil	MKVKRAALLGLLACLIGASASAQIAPNNQGDIGLFTMPSADTPRAGMLTFGVYGWKEQLVAGNLAFSDTEQRRRLYSHWAGEASIGLGLTDHWTVFATAGEEKFQSRGGWLGGALNSVQILSRFDADEPRKIRIGTKYKFV
Ga0326726_111143342	3300033433	Peat Soil	MKVKRATLVGLLACLVGASASAQLVPNAQGDIGLFTMPSADSPLAGHWTFGLYGWKEQLTAGNLAFQDTDMRSRLYSHWAGEGSLGIGLTDHWSLFVSAGAERFENRGGWTGGS
Ga0364930_0110451_692_937	3300033814	Sediment	MMAKRSALLAVLLSLAGGAAFAQIAPNNQGDIGLFTMPTAHSPRSGQLTLGLYGWLERLVAGDLPTDPPVESRLYNHWAGTG
Ga0326723_0144436_787_1044	3300034090	Peat Soil	MKVKRAALIGLLACLVGASASAQLVPNAQGDIGLFTMPSADSPLAGHWTFGLYGWKEQLTAGNLAFQDTEMRSRLYSHWAGEGSLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080452

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences