Metagenome Family F080449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080449
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	52 residues
Representative Sequence	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVRRILFVKFAEQ
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.04 %
% of genes near scaffold ends (potentially truncated)	92.17 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (38.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.12% β-sheet: 0.00% Coil/Unstructured: 54.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01943	Polysacc_synt	24.35
PF14667	Polysacc_synt_C	8.70
PF08557	Lipid_DES	4.35
PF01554	MatE	3.48
PF14833	NAD_binding_11	2.61
PF13440	Polysacc_synt_3	1.74
PF13231	PMT_2	1.74
PF00155	Aminotran_1_2	1.74
PF02585	PIG-L	0.87
PF12804	NTP_transf_3	0.87
PF00535	Glycos_transf_2	0.87
PF00487	FA_desaturase	0.87
PF01066	CDP-OH_P_transf	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.87
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.87
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.87
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.87
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.87
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.87

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	73.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.48 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	73.91 %
Unclassified	root	N/A	3.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	52.17 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	6.96 %
Unclassified	root	N/A	3.48 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.17 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	6.96 %
Unclassified	root	N/A	3.48 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.87 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.17 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	6.96 %
Unclassified	root	N/A	3.48 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.87 %
Aromatoleum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.17 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	6.96 %
Unclassified	root	N/A	3.48 %
Aromatoleum toluclasticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → Aromatoleum toluclasticum	0.87 %
Magnetospirillum fulvum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum fulvum	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	52.17 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	6.96 %
Unclassified	root	N/A	3.48 %
Aromatoleum toluclasticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → Aromatoleum toluclasticum	0.87 %
Magnetospirillum fulvum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum fulvum	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig82183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100506927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300000890\|JGI11643J12802_12248416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300000955\|JGI1027J12803_102693871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1008	Open in IMG/M
3300000956\|JGI10216J12902_100854334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300001593\|JGI12635J15846_10542653	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300002902\|JGI24803J43973_1005506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → Aromatoleum toluclasticum	539	Open in IMG/M
3300004463\|Ga0063356_102408902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300004633\|Ga0066395_10744509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300005093\|Ga0062594_102436161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300005172\|Ga0066683_10028408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3203	Open in IMG/M
3300005175\|Ga0066673_10015509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3391	Open in IMG/M
3300005293\|Ga0065715_10876771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum fulvum	530	Open in IMG/M
3300005330\|Ga0070690_100363731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1053	Open in IMG/M
3300005332\|Ga0066388_107899354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005367\|Ga0070667_100525897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300005435\|Ga0070714_101844156	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005439\|Ga0070711_101567380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300005440\|Ga0070705_100922121	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005445\|Ga0070708_101818119	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005447\|Ga0066689_10996414	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005450\|Ga0066682_10668964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300005467\|Ga0070706_100111750	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300005468\|Ga0070707_100271907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1647	Open in IMG/M
3300005536\|Ga0070697_100812278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	828	Open in IMG/M
3300005558\|Ga0066698_11109971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	500	Open in IMG/M
3300005560\|Ga0066670_10209731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1172	Open in IMG/M
3300005560\|Ga0066670_10252663	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005560\|Ga0066670_10711851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300005561\|Ga0066699_10804465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300005575\|Ga0066702_10619159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300005598\|Ga0066706_10263814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300005598\|Ga0066706_10343820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1182	Open in IMG/M
3300005764\|Ga0066903_104849224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	715	Open in IMG/M
3300006031\|Ga0066651_10813105	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006172\|Ga0075018_10379090	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300006791\|Ga0066653_10684297	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006794\|Ga0066658_10082340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1474	Open in IMG/M
3300006796\|Ga0066665_10335969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1227	Open in IMG/M
3300006904\|Ga0075424_100975116	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009090\|Ga0099827_10557107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	987	Open in IMG/M
3300009094\|Ga0111539_11597883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	756	Open in IMG/M
3300009137\|Ga0066709_103163408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300009162\|Ga0075423_12191270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300009177\|Ga0105248_12008620	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010322\|Ga0134084_10030723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1501	Open in IMG/M
3300010325\|Ga0134064_10185425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300010360\|Ga0126372_12815929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300011119\|Ga0105246_12173582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300012199\|Ga0137383_10028590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3902	Open in IMG/M
3300012199\|Ga0137383_10682984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	750	Open in IMG/M
3300012199\|Ga0137383_11038337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300012201\|Ga0137365_10274809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1251	Open in IMG/M
3300012205\|Ga0137362_10202485	Not Available	1709	Open in IMG/M
3300012206\|Ga0137380_11314083	Not Available	608	Open in IMG/M
3300012211\|Ga0137377_10082586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3026	Open in IMG/M
3300012211\|Ga0137377_11040194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300012354\|Ga0137366_10598949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
3300012469\|Ga0150984_111529816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012914\|Ga0157297_10050595	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300012922\|Ga0137394_10051303	All Organisms → cellular organisms → Bacteria	3408	Open in IMG/M
3300012925\|Ga0137419_10686119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	830	Open in IMG/M
3300012927\|Ga0137416_10161995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1762	Open in IMG/M
3300012929\|Ga0137404_10037861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3617	Open in IMG/M
3300012929\|Ga0137404_10138585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2010	Open in IMG/M
3300012930\|Ga0137407_10047228	All Organisms → cellular organisms → Bacteria	3474	Open in IMG/M
3300012930\|Ga0137407_10075815	All Organisms → cellular organisms → Bacteria	2817	Open in IMG/M
3300013296\|Ga0157374_11932849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300013296\|Ga0157374_12738258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300013297\|Ga0157378_12137143	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300014325\|Ga0163163_13098932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300014969\|Ga0157376_10448609	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300015053\|Ga0137405_1407028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1677	Open in IMG/M
3300015264\|Ga0137403_10103752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2849	Open in IMG/M
3300015356\|Ga0134073_10002403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3759	Open in IMG/M
3300015358\|Ga0134089_10155723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	904	Open in IMG/M
3300015372\|Ga0132256_101783848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300015374\|Ga0132255_105534864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300018027\|Ga0184605_10024001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2470	Open in IMG/M
3300018028\|Ga0184608_10074973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1377	Open in IMG/M
3300018073\|Ga0184624_10083929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1344	Open in IMG/M
3300018431\|Ga0066655_10379156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	931	Open in IMG/M
3300018468\|Ga0066662_12498648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300018482\|Ga0066669_12019082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300019789\|Ga0137408_1232838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1492	Open in IMG/M
3300019877\|Ga0193722_1096950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	709	Open in IMG/M
3300019996\|Ga0193693_1009281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2021	Open in IMG/M
3300020001\|Ga0193731_1009994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2436	Open in IMG/M
3300020010\|Ga0193749_1017336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1408	Open in IMG/M
3300020199\|Ga0179592_10226968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300020581\|Ga0210399_11037006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300021073\|Ga0210378_10069761	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300021413\|Ga0193750_1053936	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300022694\|Ga0222623_10199557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300022756\|Ga0222622_10717349	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300025916\|Ga0207663_10476736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	966	Open in IMG/M
3300025937\|Ga0207669_11361467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300025939\|Ga0207665_10304318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1192	Open in IMG/M
3300026529\|Ga0209806_1076262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1493	Open in IMG/M
3300026538\|Ga0209056_10030897	All Organisms → cellular organisms → Bacteria	5052	Open in IMG/M
3300027512\|Ga0209179_1127498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300027903\|Ga0209488_10027838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4116	Open in IMG/M
3300027903\|Ga0209488_10076543	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300028608\|Ga0247819_10555789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	686	Open in IMG/M
3300028796\|Ga0307287_10153202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300028810\|Ga0307294_10239630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300028824\|Ga0307310_10664565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300028878\|Ga0307278_10055905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1783	Open in IMG/M
3300031057\|Ga0170834_103843756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300031469\|Ga0170819_11398805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300031945\|Ga0310913_10597256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	783	Open in IMG/M
3300031947\|Ga0310909_10550476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	966	Open in IMG/M
3300031954\|Ga0306926_11206390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.22%
Host-Associated	Host-Associated	14.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.26%
Plants	Host-Associated → Plants	14.78%
Aquatic	Environmental → Aquatic	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.30%
Sediment	Environmental → Aquatic → Sediment	6.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.22%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002902	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um Nextera	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_01583570	2124908045	Soil	MDLPAGILTLQRTDRWVGAPLCAILTLLRRIFESTGRPGPRQVQRI
INPhiseqgaiiFebDRAFT_1005069271	3300000364	Soil	MDLPVGILTLQRTDRWVGAPLCAILTFLRRIFEPAGRPGPRQVHRILFVKFAEQ
JGI11643J12802_122484161	3300000890	Soil	MDLPAGILTLQRTDRWVGVPLCAILTILRRIFESAGRPGPRQVERILFVKFAE
JGI1027J12803_1026938712	3300000955	Soil	MDLRADISTLQRTDRWIGAPLCAILTSLRRIFVSAGRPGPRQVERILFV
JGI10216J12902_1008543342	3300000956	Soil	MDLPVGISALQRTDRWVGGPLCAILTLLRKICESAGRPGPRQFRRILFVKFAEQGSTVL
JGI12635J15846_105426531	3300001593	Forest Soil	MDLPVGISTLQHTDRWIGVPLCAILTLIQKVSAWKHRPSPHQCRRILFV
JGI24803J43973_10055061	3300002902	Soil	MDLPAGIRTLQRTDRWVGVPLCAILTLLRRIFGSAGRPGSRQVERILFVKFAE
Ga0063356_1024089021	3300004463	Arabidopsis Thaliana Rhizosphere	MDLPVGILTLQRTDRRVGGPLCAILTLLRRIFESAGRPGPRQVQRILFVNFAEQGSTARKYADQVRTAN*
Ga0066395_107445091	3300004633	Tropical Forest Soil	MDLPVGISTLQRTDRWIGAPLCLFLSVLRRIFESAGLPGPRKVRRILF
Ga0062594_1024361611	3300005093	Soil	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTNPRGPRRVRRILFVKFAEQGSTVL
Ga0066683_100284084	3300005172	Soil	MDLPASILTLQRTDRWVGAPLCAILTLLRRIFESAGRPGPRQVQR
Ga0066673_100155096	3300005175	Soil	MDLPIGISTLQRTDRWIGAPLCAVLTFLRKIFESAGPPGPRQVRRILFVKFAEQGS
Ga0065715_108767711	3300005293	Miscanthus Rhizosphere	MDLPAGIRTLQRTDRWVGAPLCAILTILRRIFESAGRPGPRQAERILFVKFAEQGSTV
Ga0070690_1003637311	3300005330	Switchgrass Rhizosphere	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTAPRGSRQVRRILFVKFAEQGSTV
Ga0066388_1078993541	3300005332	Tropical Forest Soil	MRDLSVNISILQRTDRWIGVPICALLTFFRKVFGSRQPSAPRQVRRILFVKFAE
Ga0070667_1005258972	3300005367	Switchgrass Rhizosphere	MDLPVGISTLQHTDRWVGGPLCAILTAFRKIFESAARPGPRQVERIL
Ga0070714_1018441561	3300005435	Agricultural Soil	MDLPVGISTLQNTDRWIGVPLCAILTLVRRILEPAGPTGPRQPRRILFVKFA
Ga0070711_1015673801	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPVGILTLQRADRWVGGPLCAILTLLRKIFESTGRPGSRQVERILFV
Ga0070705_1009221211	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVRRILFVKFAEQ
Ga0070708_1018181191	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPVGIATLQHTDRWIGVPLCAFLTLVRRIIEPCPPVSRQPRKILF
Ga0066689_109964141	3300005447	Soil	MDLPANISTLQRTDRWIGAPLCAILTLLRRIFESAGPPGPRQVQ
Ga0066682_106689641	3300005450	Soil	MDLPVGISTLQHTDRWIGAPLCAILTFVRRIFEAAGPPGPRQVRRVLF
Ga0070706_1001117501	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPARISTLQRADRWIGVPLCAILTLVRKIFGSKKPLGPRHVRRILLVKFAEQGST
Ga0070707_1002719071	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPVGISTLQRTDRWIGAPLCAILTIQEGSLNPQGHQGRAKFNALFVKFAEQGS
Ga0070697_1008122782	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPARISTLQRADRWIGVPLCAILTLVRKIFGSKKPLGPRHVRRILLVK
Ga0066698_111099713	3300005558	Soil	MDLPVGISTLQRTDRWIGAPLCAVLTTLRRIFESALPSGPRQLRRILFVKFAE
Ga0066670_102097313	3300005560	Soil	MDLPAGILTLQRTDRWVGVPLCAILTLLRRIFECARRPGPHQVRRILFVK
Ga0066670_102526631	3300005560	Soil	MDLPVGISTLQHTDRWIGIPLCAILTFFRRIFEAAGPPGPRRVQRVLFIKFAEQGS
Ga0066670_107118512	3300005560	Soil	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTNPRGPHRVRRILFV
Ga0066699_108044651	3300005561	Soil	MDLPVGISTLQGTDRWVGGPFCAILTLLRRIVESAGQPGARQFRRILFVKFAEQGSTV
Ga0066702_106191592	3300005575	Soil	MDLPASILTLQRTDRWVGVPLCAILTLLRRIFECARRPRGLHQVRRILFVK
Ga0066706_102638142	3300005598	Soil	MDLPARISTLQRTDRWIGAPLCAILTLLRRIFESAGPPGPRQVQCILFVKFAEQGST
Ga0066706_103438201	3300005598	Soil	MDLPIGISTLQRTDRRIGAPLCAILTVFRRIFESTGPRGPRQVRRIL
Ga0066903_1048492242	3300005764	Tropical Forest Soil	MDLPVGISTLQRADRWIGVPCCAILTVLRRIFKFAKPPGPEHLRRILFVKFAEQGSTV
Ga0066651_108131052	3300006031	Soil	MDLPASISTLQRADRWVGAPLCAILTLLRKIFESAGRPAPRQVQRILFVKFAE
Ga0075018_103790901	3300006172	Watersheds	MDLPVGIQTLQGTDRWVGAPICAILTLLRRILGYARRPRPHQVRRILFVKFAE
Ga0066653_106842972	3300006791	Soil	MDLPIGISTLQRTDRWIGAPLCAVLTFLRKIFESAGPPGPRQVRRILFVKF
Ga0066658_100823402	3300006794	Soil	MDLPVGIQTLQHTDRWVGGPLCAILTLVRKIFESARRSGPRQFRRILFVKFAEQGS
Ga0066665_103359691	3300006796	Soil	MDLPVGISTLQHTDRWIGAPLCAILTFVRRIFEAAGPPGPRQVRRV
Ga0075424_1009751161	3300006904	Populus Rhizosphere	MDLPVGIATLQHTDRWIGVPLCFFLTLLRKIAQPRLLTARQPGKILFVKFAE
Ga0099827_105571071	3300009090	Vadose Zone Soil	MDLPTGILILQRTDRWVGAPLCALLTLLRRIFESAGQLRPRQIESILFVKFAE
Ga0111539_115978832	3300009094	Populus Rhizosphere	MDLPVGISTLQHTDRWLGGPLCAILTAFRNIFESAARPGPRQVERILFVKFAQQGST
Ga0066709_1031634081	3300009137	Grasslands Soil	MDLPVGIPTLQRTDRWVGGPLCAILTLLRKICESAGRPGPRQFRRILF
Ga0075423_121912701	3300009162	Populus Rhizosphere	MDLPIGISTLQRTDRRIGAPLCAILTVFRRIFESTGPRGPRQVRRILFVK
Ga0105248_120086201	3300009177	Switchgrass Rhizosphere	MDLPVGISTLQHTDRWIGVPLCATLTFFRRIFEAAGPPGPRRVRRVL
Ga0134084_100307232	3300010322	Grasslands Soil	MDLAVGIPTLQRTDRWVGGPLCAILTLLRKIFESAGRPGPRQFRRILFVKFAE
Ga0134064_101854251	3300010325	Grasslands Soil	MDLPVGIQTLQHTDRWVGGPLCAILTLVRKIFESAPRSGPRQFR
Ga0126372_128159291	3300010360	Tropical Forest Soil	MELPARILALQRADRWIGVPLCAMLTFLRKIFGSTRPPGPQQVRRILF
Ga0105246_121735821	3300011119	Miscanthus Rhizosphere	MDLPVGISTLQHTDRWLGAPLCAILTGFRKIFESAARPGPRHVERILFVKFAEQG
Ga0137383_100285905	3300012199	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPSQVQRILFVKFAEQG*
Ga0137383_106829841	3300012199	Vadose Zone Soil	MDLPVGISTLQGTDRWVGGPLCAILTLLRRIFECTGRPGPHQVRRILFVKFAEQGSTV
Ga0137383_110383371	3300012199	Vadose Zone Soil	MDLPAGIRTLQRTDRWVGAPLCVLLTLLRRIFESAGQLRPRQIESILFVKFAEQGST
Ga0137365_102748091	3300012201	Vadose Zone Soil	MDLPVGIRTLQRTDRWVGVPLCVILTVLRRIFESAGPPGPRQVQRILFVKF
Ga0137362_102024851	3300012205	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVRR
Ga0137380_113140832	3300012206	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVRRILFV
Ga0137377_100825861	3300012211	Vadose Zone Soil	MDLPAGISTLQRTDRWIGVPLCAILTLVRKILGSTKPPGPRQVHSILFVKF
Ga0137377_110401941	3300012211	Vadose Zone Soil	MDLPAGISTLQRTDRWVGAPLCAILTLLRRIFESARQLGPHQVQRMLFVK
Ga0137366_105989492	3300012354	Vadose Zone Soil	MDLPASILTLQRTDRWVGVPLCAILTILRRIFESAGRPGPRQVERILFV
Ga0150984_1115298161	3300012469	Avena Fatua Rhizosphere	MDLPAGVSTLQRADRWIGVPVCAILTVFAKIFRSSRPSGPCHVRRILFVKFAEQGSTVL
Ga0157297_100505952	3300012914	Soil	MDLPAGIRTLQRTDRWVGVPLCAILTLLRRIFGSARGPGQRQVRRILFVKLAE
Ga0137394_100513034	3300012922	Vadose Zone Soil	MDLPVGIQTLQHTDRWVGGPLCAILTLLRKIFDSTGRPGACQVQRILFVKFAEQGS
Ga0137419_106861193	3300012925	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAIFTLLRKIFESAGPPGPRQVQRILFVKFAEQGST
Ga0137416_101619953	3300012927	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVQRILFVKFAEQG
Ga0137404_100378612	3300012929	Vadose Zone Soil	MDLPPGILTLQRTDRWVGAPLCAILTLLRRIFESAGRPGPRQVQRILFVNFAEQGSTVRKYADQVRTAN*
Ga0137404_101385852	3300012929	Vadose Zone Soil	MDLPVGIPTLQRTDRWIGAPLCAILTILRKIFESAGPPGPRQLR
Ga0137407_100472284	3300012930	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAILTILRKIFESAGPPGPRQLRRILFVKF
Ga0137407_100758153	3300012930	Vadose Zone Soil	MDLPVGIPTLQRTDRWIGAPLCAILTILRKIFESAGPPGPRQLRRILFVKF
Ga0157374_119328491	3300013296	Miscanthus Rhizosphere	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTSPRGPCQIRRILFVKFAEQG
Ga0157374_127382581	3300013296	Miscanthus Rhizosphere	MDLPVGIQTLQNTDRWVGEPLCAILTLLRRVFGSAGGPGQRQVRRILFVKFAEQ
Ga0157378_121371431	3300013297	Miscanthus Rhizosphere	MNLPVGIATLQHTDRWIGVPLCFILTLLRKIVEPHPPTARQPRKIL
Ga0163163_130989321	3300014325	Switchgrass Rhizosphere	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTNPRGPRRVRRILFVKFAEQ
Ga0157376_104486092	3300014969	Miscanthus Rhizosphere	MDLPVGISTLQHTDRWIGVPLGAMLTVFRRIFEAAGPPGPRRVLRVLFIK
Ga0137405_14070281	3300015053	Vadose Zone Soil	MDLPPGILTLQRTDRCVGAPLCAILTLLRRIFESAGRPGPRQVQRILFVNFAEQGSTVRKYADQVRTAN*
Ga0137403_101037521	3300015264	Vadose Zone Soil	MDLPVGIQTLQRTDRWVGGPLCAILTLFRKIFESAAQPGPRQFR
Ga0134073_100024035	3300015356	Grasslands Soil	MDLPARISTLQRTDRWVGAPLCAILTLFRRIFESGGPSGRRQVQRILFVKFAEQGSTVLA
Ga0134089_101557231	3300015358	Grasslands Soil	MDLPAGILTLQRVDRWVGAPLCAILTLLRRILESAERPGPRQVQRILFVK
Ga0132256_1017838482	3300015372	Arabidopsis Rhizosphere	MDLPVGISTLQHTDRWVGGPLCAILTVFRKIFDSAAPPGPRQVERILFVKFAE
Ga0132255_1055348641	3300015374	Arabidopsis Rhizosphere	MDLPAGILTLQRADRWVGAPLCAVLTLFRRIFESTWRSGSRQVQRILFVKVAE
Ga0184605_100240011	3300018027	Groundwater Sediment	MDLPASISTLQRTDRWIGAPLCAILTLFRRIFESSGPPGPRQVQRILFVKIAEQGST
Ga0184608_100749731	3300018028	Groundwater Sediment	MDLPVGIRSLQRTDRWVGGPLCAILTLLRRIFGSVREPGQRQVRRILFVKFAEQG
Ga0184621_102079422	3300018054	Groundwater Sediment	MDLPAGIRTLQRTDRWVGAPLCALLTLLRRIFGSTGRRGARQV
Ga0184624_100839292	3300018073	Groundwater Sediment	MDLPVGIQTLQGTDRWVGGPLCAILTLLRKIFESAGRSGPRQFRRILFVKFAE
Ga0066655_103791562	3300018431	Grasslands Soil	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTAPRGSRQVRRILFVK
Ga0066662_124986481	3300018468	Grasslands Soil	MDLPVGISTLQHTDRRIGAPLCAILTVFRRIFESTNQRGPHRVRRILFVKFAEQ
Ga0066669_120190822	3300018482	Grasslands Soil	MDLPVGISTLQHTDRWIGVPLCAILTFVRRIFEAAGPPGPRQVRRVLFIKFA
Ga0137408_10766411	3300019789	Vadose Zone Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQRQVQ
Ga0137408_12328382	3300019789	Vadose Zone Soil	MDLPPGILTLQRTDRWVGAPLCAILTLLRRIFESAGRPGPRQVQRILFVNFAEQGSTVRKYADQVRTAN
Ga0193722_10969502	3300019877	Soil	MDLPVGISTLQHTDRWIGAPLCAILTFVRRIFEAAGPPGPRQVRRVLFVK
Ga0193693_10092811	3300019996	Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVQR
Ga0193731_10099943	3300020001	Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVRRILFVN
Ga0193749_10173362	3300020010	Soil	MDLPAGILTLQRTDRWVGVPLCAILTLLRRIFECAGRPGPHQVRRILFV
Ga0179592_102269681	3300020199	Vadose Zone Soil	MDLPVGISTLQRTDRWVGGPLCAILTFLRKIFESAGRLGPRQSQRILFVKF
Ga0210399_110370061	3300020581	Soil	MDLPVGISTLQHTDRWIGIPLCAILTFFRRIFEAAGPPGPSRVRRVLFIKFAEQGSTVLA
Ga0210378_100697612	3300021073	Groundwater Sediment	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVRRILFVK
Ga0193750_10539361	3300021413	Soil	MDLPVGISTLQHTDRWIGIPLCAILTFFRRIFEAAGPPGPRRVQRVLFIKFAEQGSTVLA
Ga0222623_101995572	3300022694	Groundwater Sediment	MDLPASILTLQRTDRWVGAPFCAILTLFRRIFEPVGRAGPRRVQR
Ga0222622_107173491	3300022756	Groundwater Sediment	MDLPVGISTLQRTDRWIGAPLCAILTLLRRIFESAGPPGPHQVRRILFVKFAEQ
Ga0207663_104767363	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPVGIPTLQRADRWVGGPLCAILTLLRKIFESTGRPGSRQVERILFVKFAEQGST
Ga0207669_113614672	3300025937	Miscanthus Rhizosphere	MDLPVGISTLQHTDRWVGAPLCAILTFVRRIFEAAGPPGPRQVRRVLFIKFAEQGSTV
Ga0207665_103043181	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDLPAGILTLQWADRWVGAPLCAILTFLRRIFESAPQSGSRRVQ
Ga0209806_10762623	3300026529	Soil	MDLPVGISTLQRTDRWIGAPLCAILTLLRKIFESAGPPGPRQVQRILFVKFAEQGST
Ga0209056_100308971	3300026538	Soil	MDLPASISTLQRTDRWIGAPLCAILTLLRRIFESAGPPGPRQVQRILFVKFAE
Ga0209179_11274981	3300027512	Vadose Zone Soil	MDLPVGISTLQRTDRWVGGPLCAILTFLRKIFESAGRLGPRQSQRI
Ga0209488_100278387	3300027903	Vadose Zone Soil	MDLPVGIQTLQHTDRWVGGPLCAILTLLRKIFESARRSGPRPFRRIL
Ga0209488_100765433	3300027903	Vadose Zone Soil	MDLPVGISTLQRTDRWVGGPLCAILTLLRKIFESARRSGPRQFRRILFVKFAEQG
Ga0247819_105557892	3300028608	Soil	MDLPAGILTLQRTDRWVGVPLCAILTILRRIFESAGRPGPPQVERILFVKFAEQGSTVL
Ga0307287_101532022	3300028796	Soil	MDLPVGISTLQRTDRWIGAPLCAILTILRKIFESAGPPGPRQLRRILFVKFAEQGSTV
Ga0307294_102396301	3300028810	Soil	MDLPAGILTLQRTDHWVGAPLCAILTMLRRIFESAGPPARRQVERILFVKFAEQGS
Ga0307310_106645651	3300028824	Soil	MDLPVGIQTLQHTDRWVGQPLCAILTLLRRIFGSTEGPGQRQVRRILFVKFA
Ga0307278_100559051	3300028878	Soil	MDLPAGILTLQRTDRWVGAPLCAILTLLRRIFESAGPPGPRQIQRILFVKFAEQGSTVRKYADQVRTAN
Ga0170834_1038437561	3300031057	Forest Soil	MDLPVGISALQHTDRWVGGPLCAILTLLREIFESTGRPGPRQFQRILFVKFAEQG
Ga0170819_113988051	3300031469	Forest Soil	MDLPVGISTLQGTDRWVGGPLCAVLTLLRKIFESAGPPGPRQFRRILFVKFA
Ga0310913_105972562	3300031945	Soil	MDLPVGISALQRTDRWIGVPLCVILTILRRIFESARRQGPRQVERVLFVKFAEQG
Ga0310909_105504761	3300031947	Soil	MDLPAGILTLQRTDRWVGIPLCAILTLLRRIFECARRPGPHQIRRILFVKFAE
Ga0306926_112063902	3300031954	Soil	MDLPVGISALQRTDRWVGGPLCAILTLVRKIFGSKKPPGPRHVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences