Metagenome Family F080446

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080446
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	91 residues
Representative Sequence	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD
Number of Associated Samples	64
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.52 %
% of genes near scaffold ends (potentially truncated)	29.57 %
% of genes from short scaffolds (< 2000 bps)	67.83 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (60.000 % of family members)
Environment Ontology (ENVO)	Unclassified (53.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.05% β-sheet: 4.40% Coil/Unstructured: 50.55%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00275	EPSP_synthase	44.35
PF13349	DUF4097	13.04
PF13345	Obsolete Pfam Family	2.61
PF01593	Amino_oxidase	1.74
PF08281	Sigma70_r4_2	1.74
PF08241	Methyltransf_11	0.87
PF07238	PilZ	0.87
PF01663	Phosphodiest	0.87
PF13490	zf-HC2	0.87
PF05580	Peptidase_S55	0.87
PF00069	Pkinase	0.87
PF12704	MacB_PCD	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.26 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	70.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.35 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.35 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.35 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.57 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.87 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.57 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.87 %
Acidobacteria bacterium 13_2_20CM_2_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	0.87 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10408179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300002245\|JGIcombinedJ26739_100330157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300002561\|JGI25384J37096_10122927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300005180\|Ga0066685_10488569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300005440\|Ga0070705_101183950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005444\|Ga0070694_101126550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300005445\|Ga0070708_100007615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8671	Open in IMG/M
3300005610\|Ga0070763_10288343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300006172\|Ga0075018_10399917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300006796\|Ga0066665_10000713	All Organisms → cellular organisms → Bacteria	14098	Open in IMG/M
3300007255\|Ga0099791_10020882	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300007255\|Ga0099791_10021083	All Organisms → cellular organisms → Bacteria	2801	Open in IMG/M
3300007258\|Ga0099793_10433409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300007265\|Ga0099794_10006836	All Organisms → cellular organisms → Bacteria	4646	Open in IMG/M
3300007265\|Ga0099794_10057997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1876	Open in IMG/M
3300007265\|Ga0099794_10059000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1861	Open in IMG/M
3300009012\|Ga0066710_100259722	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300009038\|Ga0099829_10000211	All Organisms → cellular organisms → Bacteria	29819	Open in IMG/M
3300009088\|Ga0099830_10030541	All Organisms → cellular organisms → Bacteria	3635	Open in IMG/M
3300009143\|Ga0099792_10359954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300011120\|Ga0150983_12835462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300011120\|Ga0150983_15395904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300012096\|Ga0137389_10026004	All Organisms → cellular organisms → Bacteria	4186	Open in IMG/M
3300012096\|Ga0137389_10574880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300012189\|Ga0137388_10222129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1710	Open in IMG/M
3300012189\|Ga0137388_10303341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300012202\|Ga0137363_10810192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300012202\|Ga0137363_11123042	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012203\|Ga0137399_10034737	All Organisms → cellular organisms → Bacteria	3517	Open in IMG/M
3300012203\|Ga0137399_10043631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3206	Open in IMG/M
3300012203\|Ga0137399_10111501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2135	Open in IMG/M
3300012203\|Ga0137399_10129172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1995	Open in IMG/M
3300012203\|Ga0137399_10794065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300012203\|Ga0137399_11116052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012205\|Ga0137362_10067434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2955	Open in IMG/M
3300012205\|Ga0137362_10394393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300012205\|Ga0137362_10601186	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300012361\|Ga0137360_11665217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012582\|Ga0137358_10015218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4872	Open in IMG/M
3300012582\|Ga0137358_10097935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1984	Open in IMG/M
3300012582\|Ga0137358_10323179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300012582\|Ga0137358_10663067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300012685\|Ga0137397_10174474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1596	Open in IMG/M
3300012685\|Ga0137397_10310764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300012685\|Ga0137397_10356825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300012685\|Ga0137397_10594151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300012917\|Ga0137395_10502600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300012918\|Ga0137396_10135577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1784	Open in IMG/M
3300012918\|Ga0137396_10226467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300012918\|Ga0137396_10583626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300012918\|Ga0137396_11150203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012918\|Ga0137396_11269547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012922\|Ga0137394_10033416	All Organisms → cellular organisms → Bacteria	4190	Open in IMG/M
3300012922\|Ga0137394_10163780	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300012922\|Ga0137394_10345677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300012922\|Ga0137394_11465022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012923\|Ga0137359_10029134	All Organisms → cellular organisms → Bacteria	4729	Open in IMG/M
3300012923\|Ga0137359_10040399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4037	Open in IMG/M
3300012923\|Ga0137359_10647166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300012923\|Ga0137359_10688099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300012925\|Ga0137419_10672900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300012927\|Ga0137416_10103446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2146	Open in IMG/M
3300012927\|Ga0137416_10110257	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300012927\|Ga0137416_10207078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1578	Open in IMG/M
3300012927\|Ga0137416_10604898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300012927\|Ga0137416_11491894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300012929\|Ga0137404_10276455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1449	Open in IMG/M
3300012930\|Ga0137407_10362461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1336	Open in IMG/M
3300012930\|Ga0137407_10852791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300012930\|Ga0137407_11042789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300012944\|Ga0137410_10067416	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300012944\|Ga0137410_10514656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300012944\|Ga0137410_12063770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300015241\|Ga0137418_10134257	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300015241\|Ga0137418_10136818	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300015245\|Ga0137409_10044981	All Organisms → cellular organisms → Bacteria	4218	Open in IMG/M
3300018431\|Ga0066655_10631908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_57_6	723	Open in IMG/M
3300018468\|Ga0066662_10546126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300019882\|Ga0193713_1104958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300020004\|Ga0193755_1004214	All Organisms → cellular organisms → Bacteria → Acidobacteria	4598	Open in IMG/M
3300020170\|Ga0179594_10330158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300020579\|Ga0210407_10000997	All Organisms → cellular organisms → Bacteria → Acidobacteria	28131	Open in IMG/M
3300020579\|Ga0210407_10041338	All Organisms → cellular organisms → Bacteria	3432	Open in IMG/M
3300020579\|Ga0210407_11165831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300020580\|Ga0210403_10000037	All Organisms → cellular organisms → Bacteria	145489	Open in IMG/M
3300020581\|Ga0210399_10067741	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300020581\|Ga0210399_10103952	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300020581\|Ga0210399_10121359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2148	Open in IMG/M
3300020581\|Ga0210399_11021626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300021168\|Ga0210406_10007357	All Organisms → cellular organisms → Bacteria	11197	Open in IMG/M
3300021178\|Ga0210408_10004486	All Organisms → cellular organisms → Bacteria → Acidobacteria	12447	Open in IMG/M
3300021420\|Ga0210394_10312573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300021432\|Ga0210384_10049394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3829	Open in IMG/M
3300021479\|Ga0210410_10196295	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300025939\|Ga0207665_11670751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300026320\|Ga0209131_1289153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300026360\|Ga0257173_1019816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300027655\|Ga0209388_1026759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1637	Open in IMG/M
3300027671\|Ga0209588_1006178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3468	Open in IMG/M
3300027671\|Ga0209588_1065294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300027862\|Ga0209701_10130751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1547	Open in IMG/M
3300028047\|Ga0209526_10145275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1662	Open in IMG/M
3300028047\|Ga0209526_10207600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300028536\|Ga0137415_10057057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3772	Open in IMG/M
3300031708\|Ga0310686_105315681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7304	Open in IMG/M
3300031720\|Ga0307469_10162861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1689	Open in IMG/M
3300031720\|Ga0307469_10351228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300031720\|Ga0307469_10447329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300031720\|Ga0307469_11457592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300031740\|Ga0307468_101970883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300031820\|Ga0307473_10204843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300032180\|Ga0307471_100161899	All Organisms → cellular organisms → Bacteria → Acidobacteria	2174	Open in IMG/M
3300032180\|Ga0307471_102049182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300032180\|Ga0307471_102659943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300032515\|Ga0348332_14038214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.13%
Aquatic	Environmental → Aquatic	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.26%
Sediment	Environmental → Aquatic → Sediment	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.70%
Loam	Environmental → Terrestrial → Soil → Loam	9.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	60.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104081791	3300001661	Forest Soil	MISDEFVQREILRLAGNTHKSACISTQRISAFYNVPESRIRRQLTMLAEQNKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD*
JGIcombinedJ26739_1003301572	3300002245	Forest Soil	MISDEFVQREILRLARNSHKSACISTRRISAFYNVPESRIRRQLTILAEQKKIRLTGWDGRGPRPYSEWANAEDFVNSHADGGDFHVELVD*
JGI25384J37096_101229272	3300002561	Grasslands Soil	MISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0066685_104885692	3300005180	Soil	REILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0070705_1011839502	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MISDEFVQKEILRLARNSHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGRGPRPYSEWANAEDFVNSHADGGHF
Ga0070694_1011265502	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	KEILRLARNSHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0070708_1000076158	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0070763_102883432	3300005610	Soil	MISDEFVQKEILRLAGNGHKSACISTRRISAFYNVPERRIRKQLTLLAEQKKIRLTGWKGSALCPYSDWANSEDFVNSQADGGHFHVDLLD*
Ga0075018_103999171	3300006172	Watersheds	MISDEFVQREILRLAGNSHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIRLTGWDGHSLRPYSEWANAEAFVNSHADGGHFRVELVD*
Ga0066665_100007132	3300006796	Soil	MISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTAWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0099791_100208824	3300007255	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLADQKKIRLTGWDGRELRPYSEWANAEDFVNSHADGGHFQVELLD*
Ga0099791_100210834	3300007255	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQNKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0099793_104334092	3300007258	Vadose Zone Soil	VQREILRLAGNNHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGQALRPYSEWANAEDFVNSHADGSHFRVELLD*
Ga0099794_100068364	3300007265	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0099794_100579972	3300007265	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLADQKKIRLTGWDGRELRPYSEWANAEDFVNSQADGGHFQVELLD*
Ga0099794_100590002	3300007265	Vadose Zone Soil	MISDEYVQREILRLARNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGSHFRVELVD*
Ga0066710_1002597223	3300009012	Grasslands Soil	MISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHV
Ga0099829_1000021116	3300009038	Vadose Zone Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRWQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0099830_100305412	3300009088	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTQRISAFYNVPESRIRQQLTMLAEQNKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD*
Ga0099792_103599541	3300009143	Vadose Zone Soil	TMISDEYVQREILRLARNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGSHFRVELVD*
Ga0150983_128354621	3300011120	Forest Soil	HGAPMISDEFVQKEILRLAGNGHKSACISTRRISAFYNVPERRIRKQLTLLAEQKKIRLTVWNGRALCPYSDWANSEDFVNSQADGGHFHVDLLD*
Ga0150983_153959042	3300011120	Forest Soil	MVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLTALAEQKKIRLTGWDGRAQRPYTEWASAEDFVNSHADGVHFHVDLLD*
Ga0137389_100260043	3300012096	Vadose Zone Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRWQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGQFHVELVD*
Ga0137389_105748802	3300012096	Vadose Zone Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRTRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD*
Ga0137388_102221292	3300012189	Vadose Zone Soil	MISDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGYFRVELVD*
Ga0137388_103033412	3300012189	Vadose Zone Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD*
Ga0137363_108101921	3300012202	Vadose Zone Soil	MISDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFRVELVD*
Ga0137363_111230422	3300012202	Vadose Zone Soil	HKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGLRPYTEWANAEDFVNSHADGGHFHVELVD*
Ga0137399_100347372	3300012203	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQNKITLTGWDGRELRPYSEWANAEAFVNSHADGGHFHVELVD*
Ga0137399_100436312	3300012203	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD*
Ga0137399_101115012	3300012203	Vadose Zone Soil	MSFIFPEEVTDYCDGATMISDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFRVELVD*
Ga0137399_101291722	3300012203	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGRALRPYSEWANAEDFVNSHADGSHFRVELLD*
Ga0137399_107940651	3300012203	Vadose Zone Soil	MISDEYVQREILRLARNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKITLTGWDGWELRPYSEWASAEDFVNSHADGSHFRVEL
Ga0137399_111160522	3300012203	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137362_100674342	3300012205	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD*
Ga0137362_103943932	3300012205	Vadose Zone Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGLRPYTEWANAEDFVNSHADGGHFHVELVD*
Ga0137362_106011862	3300012205	Vadose Zone Soil	CCDGVTMISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137360_116652171	3300012361	Vadose Zone Soil	QREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD*
Ga0137358_100152182	3300012582	Vadose Zone Soil	MVSDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGHFHVELVD*
Ga0137358_100979352	3300012582	Vadose Zone Soil	MISDEFVQREILRLAGNAHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD*
Ga0137358_103231792	3300012582	Vadose Zone Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGHFHVELVD*
Ga0137358_106630672	3300012582	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFRVELVD*
Ga0137397_101744741	3300012685	Vadose Zone Soil	MVSDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD*
Ga0137397_103107641	3300012685	Vadose Zone Soil	MSVTLSHREITEYSDGATMITDEYVQREILRLAGNTHRSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAED
Ga0137397_103568252	3300012685	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSAYISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137397_105941511	3300012685	Vadose Zone Soil	MISDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAED
Ga0137395_105026002	3300012917	Vadose Zone Soil	MISDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGYFRVALVD*
Ga0137396_101355772	3300012918	Vadose Zone Soil	MSSQGEVTDYCDGATMISDEYVQREILRLAGNAHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKITLTGWDGWELRPYSEWASAEDFVNSHADGSHFRVELVD*
Ga0137396_102264671	3300012918	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTQRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGQALRPYSEWANAEDFVNSHADGSHFRVDLLD*
Ga0137396_105836262	3300012918	Vadose Zone Soil	LMISDEFVQREILRLAGNTHKSACISTRRISAFYNVPEWRIRRQLTLLAEQKKIKLTGWDGHGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137396_111502031	3300012918	Vadose Zone Soil	MGCHPPVVATERLMISDEFVQREILRLAGNTHKSACISTRRISAFYNMPESRIRRQLTMLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGWHFHVERVD*
Ga0137396_112695471	3300012918	Vadose Zone Soil	REILRLAGNTHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEEFVNSHADGGYFHVELVD*
Ga0137394_100334161	3300012922	Vadose Zone Soil	MSVTLSHREITEYSDGATMITDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRE
Ga0137394_101637801	3300012922	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGRALRPYSEWANAEDFVNSH
Ga0137394_103456772	3300012922	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNMPESRIRRQLTMLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137394_114650221	3300012922	Vadose Zone Soil	MVSDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVEL
Ga0137359_100291344	3300012923	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD*
Ga0137359_100403996	3300012923	Vadose Zone Soil	LAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137359_106471662	3300012923	Vadose Zone Soil	MVSDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGLRPYTEWANAEDFVNSHADGGHFHVELVD*
Ga0137359_106880992	3300012923	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGHFHVELVD*
Ga0137419_106729002	3300012925	Vadose Zone Soil	MISDEYVQREILRLARNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKITLTGWDGWELRPYSEWASAEDFVNSHADGSHFRVELVD*
Ga0137416_101034462	3300012927	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGRALRPYCEWANAEDFVNSHADGSHFRVELLD*
Ga0137416_101102571	3300012927	Vadose Zone Soil	MISDEYVQREILRLAKPTHKSACISTRRISAFFNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSAWASAEDFVNSHADGGHFRVELVD*
Ga0137416_102070782	3300012927	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADG
Ga0137416_106048981	3300012927	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSH
Ga0137416_114918941	3300012927	Vadose Zone Soil	YVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD*
Ga0137404_102764551	3300012929	Vadose Zone Soil	MSVTLSHREITEYSDGATMITDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTALAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFQVELVD*
Ga0137407_103624612	3300012930	Vadose Zone Soil	MISDEFVKREILRLAGNTHKSAYISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGDFHVELVD*
Ga0137407_108527911	3300012930	Vadose Zone Soil	MSVTLSHREITEYSDGATMITDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFQVELVD*
Ga0137407_110427891	3300012930	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLADQKKIRLTGWDGRELRPYSEWANAEDFVNSHA
Ga0137410_100674162	3300012944	Vadose Zone Soil	MSVTLSHREITEYSDGATMITDEYVQREILRLAGNTHRSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFRVELVD*
Ga0137410_105146562	3300012944	Vadose Zone Soil	MVSDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVE
Ga0137410_120637701	3300012944	Vadose Zone Soil	VGCQPPIVATERLMISDEFVQREILRLAGNTHKSAYISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD*
Ga0137418_101342571	3300015241	Vadose Zone Soil	EILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD*
Ga0137418_101368182	3300015241	Vadose Zone Soil	MITDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFRVELVD*
Ga0137409_100449813	3300015245	Vadose Zone Soil	MSVTLSHREITEYSDGATMITDEYVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGGHFRVELVD*
Ga0066655_106319081	3300018431	Grasslands Soil	MISDEFVQREILQLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD
Ga0066662_105461262	3300018468	Grasslands Soil	MISDEFVQREILRLAGNTHKSACISTRRISTFYNVPESRIRRQLTTLAEQKKITLTGWDGRELRPYSEWANAEDFVNSHADGGHFHVELVD
Ga0193713_11049581	3300019882	Soil	MISDEFVQREILRLTRNSHKSACISTRRISAFYNVPELRIRRQLTTLAEQKKIRLTGWDGRGPRPYSEWANAEDFVNSHADGGNFHVELMD
Ga0193755_10042142	3300020004	Soil	MISDEFVQREIMRLAGNAHKSACISTRRISAFYNLPESRIRRQLTTLAEQKKIRLTGWDGRGPRPYSEWANAEDFVNSHADGGNFHVELMD
Ga0179594_103301581	3300020170	Vadose Zone Soil	MVSDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD
Ga0210407_1000099722	3300020579	Soil	MVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLTTLAEQKKIRLTGWDGRAQRPYTEWASAEEFVNSHADGGHFHVDLLD
Ga0210407_100413382	3300020579	Soil	MVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLTALAEQKKIRLTGWDGRAQRPYTEWASAEDFVNSHADGVHFHVDLLD
Ga0210407_111658311	3300020579	Soil	MISDEFVQKEILRLAGSSHKSACISTRRISAFYNVPERRIRKQLTLLAEQKKIRLTGWKGSALCPYSDWANSEDFVNSQADGGHFHVDLLE
Ga0210403_1000003728	3300020580	Soil	MISDEFVQKEILRLAGNGHKSACISTRRISAFYNVPERRIRKQLTLLAEQKKIRLTGWKGSALCPYSDWANSEDFVNSQADGGHFHVDLLD
Ga0210399_100677414	3300020581	Soil	MVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLAALAEQKKIQLKGWDGHAQRAYSEWACAEDFVNSHADGGHFHVDLLD
Ga0210399_101039521	3300020581	Soil	RNNHKSACISTRRISAFYNVPEARIRRQLTALAEQKKIRLTGWDGRAQRPYTEWASAEDFVNSHADGVHFHVDLLD
Ga0210399_101213592	3300020581	Soil	MISDEFVQKEILRLAGNGHKSACISTRRISAFYNVPERRIRKQLTLLAEQKKIRLTGWNGRALCPYSDWANSEDFVNSQADGGHFHVDLLD
Ga0210399_110216261	3300020581	Soil	ILRLARNNHKSACISTRRISAFYNVPEARIRRQLTTLAEQKKIRLTGWDGRAQRPYTEWASAEEFVNSHADGGHFHVDLLD
Ga0210406_100073573	3300021168	Soil	MTPGSIYSRLIPKSTGWAISRPAISARGCRSGSTKMVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLTALAEQKKIRLTGWDGRAQRPYTEWASAEDFVNSHADGVHFHVDLLD
Ga0210408_1000448615	3300021178	Soil	MVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLTALAEQKKIRLTGWDGRAQRPYTEWASAEEFVNSHADGGHFHVDLLD
Ga0210394_103125731	3300021420	Soil	EFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLAALAEQKKIQLKGWDGHAQRAYSEWACAEDFVNSHADGGHFHVDLLD
Ga0210384_100493941	3300021432	Soil	MVSDEFVQREILRLARNNHKSACISTRRISAFYNVPEARIRRQLTALAEQKKIRLTGWDGHAQRVYSEWASAEDFVNSHADGGHFHVDLLD
Ga0210410_101962952	3300021479	Soil	MVSDEFVQREILRLARNNHRSACISTRRISAFYNVSEARIRRQLTALAEQKKIRLTGWDGRAQRPYTEWASAEEFVNSHADGGHFHVDLLD
Ga0207665_116707511	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MISDELVQKEILRLARNSHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSAWANAEDFVNSH
Ga0209131_12891531	3300026320	Grasslands Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGNFHVELVD
Ga0257173_10198162	3300026360	Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRWQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD
Ga0209388_10267591	3300027655	Vadose Zone Soil	MISDEFVQREILWLAGNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD
Ga0209588_10061782	3300027671	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFHVELVD
Ga0209588_10652942	3300027671	Vadose Zone Soil	MISDEYVQREILRLARNTHKSACISTRRISAFYNVPESCIRRQLTTLAEQKKITLTGWDGRELRPYSEWASAEDFVNSHADGSHFRVELVD
Ga0209701_101307512	3300027862	Vadose Zone Soil	MISDEFVQREILRLAGNTHKSACISTQRISAFYNVPESRIRQQLTMLAEQNKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD
Ga0209526_101452752	3300028047	Forest Soil	MVSDEFVQREILRLAGNHHKSACINTRRISEFYNVPERRIRRQLTMLAEQKKIRLAGWDGRALRPYSDWANAEDFVNAHADGVQFRVDLLD
Ga0209526_102076002	3300028047	Forest Soil	MISDEFVQREILRLARNSHKSACISTRRISAFYNVPESRIRRQLTILAEQKKIRLTGWDGRGPRPYSEWANAEDFVNSHADGGDFHVELVD
Ga0137415_100570573	3300028536	Vadose Zone Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNMPESRIRRQLTTLAEQKKIRLTGWDGRALRPYSEWANAEDFVNSHADGSHFRVELLD
Ga0310686_1053156814	3300031708	Soil	MISDEFVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIRLTGWDGRAQRPYSDWASAEDFVNSHADGVHFRVDLLD
Ga0307469_101628612	3300031720	Hardwood Forest Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD
Ga0307469_103512282	3300031720	Hardwood Forest Soil	MISDEYVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLADQKKIRLTGWDGRELRPYSEWANAEDFVNSHADGGHFQVELLD
Ga0307469_104473292	3300031720	Hardwood Forest Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGLRPYTEWANAEDFVNSQADGGHFHVELVD
Ga0307469_114575921	3300031720	Hardwood Forest Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQTKIRLTGWDGRGPRPYSEWANAEDFVNSHADGGNFHVELVD
Ga0307468_1019708831	3300031740	Hardwood Forest Soil	MISDEFVQREILRLAGNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHADGGHFRVELVD
Ga0307473_102048431	3300031820	Hardwood Forest Soil	MISDEYVQREILRLVKNNHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGHALRPYSEWANAEEFVNSHADGGHFRVELVD
Ga0307471_1001618992	3300032180	Hardwood Forest Soil	MISDEFVQREILRLAGNAHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWANAEDFVNSHEDGGHFHVELVD
Ga0307471_1020491822	3300032180	Hardwood Forest Soil	MISDEFVQREILRLARNTHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYSEWASAEDFVNSHEDGGHFHVELVD
Ga0307471_1026599432	3300032180	Hardwood Forest Soil	MISDEFVQREILRLARNAHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIKLTGWDGRGPRPYTEWANAEDFVNSHADGGHFHVELVD
Ga0348332_140382141	3300032515	Plant Litter	ALSCPEMSVSGCCHGAANMISDEFVQREILRLAGNNHKSACISTRRISAFYNVPESRIRRQLTTLAEQKKIRLTGWDGRAQRPYSDWASAEDFVNSHADGVHFRVDLLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080446

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences