Metagenome Family F080391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080391
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	87 residues
Representative Sequence	MKPDLTHFQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP
Number of Associated Samples	68
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.02 %
% of genes near scaffold ends (potentially truncated)	33.91 %
% of genes from short scaffolds (< 2000 bps)	94.78 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.043 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.304 % of family members)
Environment Ontology (ENVO)	Unclassified (53.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.957 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 18.92% Coil/Unstructured: 64.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00313	CSD	12.17
PF05239	PRC	4.35
PF00574	CLP_protease	2.61
PF00106	adh_short	0.87
PF13561	adh_short_C2	0.87
PF00271	Helicase_C	0.87
PF08447	PAS_3	0.87
PF03466	LysR_substrate	0.87
PF02839	CBM_5_12	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	5.22
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	5.22
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	2.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.04 %
Unclassified	root	N/A	6.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.04 %
Unclassified	root	N/A	6.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.04 %
Unclassified	root	N/A	6.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.48 %
Unclassified	root	N/A	6.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.26 %
Unclassified	root	N/A	6.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	46.09 %
Unclassified	root	N/A	6.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.48 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	41.74 %
Unclassified	root	N/A	6.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.48 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	41.74 %
Unclassified	root	N/A	6.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.48 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	41.74 %
Unclassified	root	N/A	6.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.48 %
Duganella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella	0.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	41.74 %
Unclassified	root	N/A	6.96 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.48 %
Duganella phyllosphaerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella phyllosphaerae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10112692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	570	Open in IMG/M
3300000891\|JGI10214J12806_11061554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	651	Open in IMG/M
3300004114\|Ga0062593_101458211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	735	Open in IMG/M
3300004156\|Ga0062589_101848592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	608	Open in IMG/M
3300005332\|Ga0066388_100983484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1410	Open in IMG/M
3300005332\|Ga0066388_102400711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	956	Open in IMG/M
3300005332\|Ga0066388_103613090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	789	Open in IMG/M
3300005332\|Ga0066388_105472725	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005332\|Ga0066388_108007877	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005713\|Ga0066905_100187505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300005713\|Ga0066905_100508713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1003	Open in IMG/M
3300005713\|Ga0066905_101907519	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005764\|Ga0066903_100119183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3659	Open in IMG/M
3300005764\|Ga0066903_101602308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1235	Open in IMG/M
3300005764\|Ga0066903_101762621	Not Available	1181	Open in IMG/M
3300005764\|Ga0066903_102901909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	930	Open in IMG/M
3300005764\|Ga0066903_103796992	Not Available	812	Open in IMG/M
3300005937\|Ga0081455_10370683	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300006102\|Ga0075015_100516440	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006173\|Ga0070716_100884326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	698	Open in IMG/M
3300006174\|Ga0075014_100160497	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300006354\|Ga0075021_10700687	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300009137\|Ga0066709_104194259	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009792\|Ga0126374_10509218	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300010043\|Ga0126380_12262281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	504	Open in IMG/M
3300010046\|Ga0126384_11416944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	648	Open in IMG/M
3300010046\|Ga0126384_11989752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	555	Open in IMG/M
3300010047\|Ga0126382_10275507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1248	Open in IMG/M
3300010047\|Ga0126382_10649327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	877	Open in IMG/M
3300010358\|Ga0126370_10429027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1095	Open in IMG/M
3300010360\|Ga0126372_13113033	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010361\|Ga0126378_10759516	All Organisms → cellular organisms → Bacteria → Proteobacteria	1080	Open in IMG/M
3300010362\|Ga0126377_12062592	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300010366\|Ga0126379_13587551	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010398\|Ga0126383_10424312	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300010398\|Ga0126383_12872790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	563	Open in IMG/M
3300012948\|Ga0126375_10557641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	866	Open in IMG/M
3300012948\|Ga0126375_11581303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	564	Open in IMG/M
3300012971\|Ga0126369_10230629	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300015371\|Ga0132258_11465704	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300015374\|Ga0132255_105484781	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300015374\|Ga0132255_105571961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	533	Open in IMG/M
3300016270\|Ga0182036_10042020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella phyllosphaerae	2814	Open in IMG/M
3300016270\|Ga0182036_10344288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1147	Open in IMG/M
3300016294\|Ga0182041_11245479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	679	Open in IMG/M
3300016294\|Ga0182041_11987301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	541	Open in IMG/M
3300016319\|Ga0182033_10021402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3946	Open in IMG/M
3300016319\|Ga0182033_10088890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2238	Open in IMG/M
3300016319\|Ga0182033_11332746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	645	Open in IMG/M
3300016371\|Ga0182034_10839584	Not Available	788	Open in IMG/M
3300016371\|Ga0182034_10944604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	743	Open in IMG/M
3300016387\|Ga0182040_10712256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	821	Open in IMG/M
3300016422\|Ga0182039_11853908	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300016422\|Ga0182039_12167188	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300016422\|Ga0182039_12238978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	504	Open in IMG/M
3300016445\|Ga0182038_10478473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1059	Open in IMG/M
3300016445\|Ga0182038_10913749	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300017961\|Ga0187778_10147782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1481	Open in IMG/M
3300018053\|Ga0184626_10161280	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300018076\|Ga0184609_10209647	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300021560\|Ga0126371_10891471	Not Available	1034	Open in IMG/M
3300021560\|Ga0126371_10979772	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300021560\|Ga0126371_11593745	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300021560\|Ga0126371_12576672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	616	Open in IMG/M
3300021560\|Ga0126371_12636391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	609	Open in IMG/M
3300027703\|Ga0207862_1022985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1864	Open in IMG/M
3300031572\|Ga0318515_10171660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300031573\|Ga0310915_10211662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1358	Open in IMG/M
3300031573\|Ga0310915_10876309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	630	Open in IMG/M
3300031719\|Ga0306917_10161137	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300031736\|Ga0318501_10705382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300031744\|Ga0306918_10421935	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300031744\|Ga0306918_10508147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	944	Open in IMG/M
3300031744\|Ga0306918_10689520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	799	Open in IMG/M
3300031768\|Ga0318509_10222961	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031771\|Ga0318546_10392048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	969	Open in IMG/M
3300031797\|Ga0318550_10555417	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031798\|Ga0318523_10419309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300031833\|Ga0310917_10939551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	581	Open in IMG/M
3300031879\|Ga0306919_11113432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	602	Open in IMG/M
3300031890\|Ga0306925_10424082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1424	Open in IMG/M
3300031890\|Ga0306925_11564251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	643	Open in IMG/M
3300031890\|Ga0306925_11706068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	608	Open in IMG/M
3300031910\|Ga0306923_10783266	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300031910\|Ga0306923_10838322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1012	Open in IMG/M
3300031912\|Ga0306921_10689732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1174	Open in IMG/M
3300031912\|Ga0306921_10902874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1003	Open in IMG/M
3300031941\|Ga0310912_10462634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	989	Open in IMG/M
3300031941\|Ga0310912_10481591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	968	Open in IMG/M
3300031942\|Ga0310916_11628203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	524	Open in IMG/M
3300031945\|Ga0310913_10142464	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300031945\|Ga0310913_11047529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	571	Open in IMG/M
3300031946\|Ga0310910_10258709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1363	Open in IMG/M
3300031946\|Ga0310910_10283868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1300	Open in IMG/M
3300031946\|Ga0310910_10587908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	883	Open in IMG/M
3300031947\|Ga0310909_10321123	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300031947\|Ga0310909_10607172	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300031947\|Ga0310909_10829606	Not Available	762	Open in IMG/M
3300031954\|Ga0306926_10510319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1477	Open in IMG/M
3300032001\|Ga0306922_11850815	Not Available	593	Open in IMG/M
3300032059\|Ga0318533_10400154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1003	Open in IMG/M
3300032059\|Ga0318533_10906013	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300032075\|Ga0310890_10967594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	683	Open in IMG/M
3300032076\|Ga0306924_11002460	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300032076\|Ga0306924_11296812	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300032261\|Ga0306920_100083608	All Organisms → cellular organisms → Bacteria	4699	Open in IMG/M
3300032261\|Ga0306920_101422871	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300032261\|Ga0306920_102479757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	714	Open in IMG/M
3300032261\|Ga0306920_103699261	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032892\|Ga0335081_11843296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300033289\|Ga0310914_10485439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118	Open in IMG/M
3300033289\|Ga0310914_11032138	Not Available	723	Open in IMG/M
3300033289\|Ga0310914_11390387	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300033290\|Ga0318519_10205451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.52%
Host-Associated	Host-Associated	3.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.17%
Aquatic	Environmental → Aquatic	4.35%
Plants	Host-Associated → Plants	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.17%
Sediment	Environmental → Aquatic → Sediment	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.39%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101126922	3300000793	Forest Soil	MPSPSSHTSNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYGDDRRTELTQAEFLARAWRLANDKARELNWIMQKKSP*
JGI10214J12806_110615542	3300000891	Soil	MKADLAHIQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLATAWRLANDKARELRWIMQNEST*SV
Ga0062593_1014582111	3300004114	Soil	MKADLAHIQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLATAWRLANDKARELRWIMQNKST*
Ga0062589_1018485921	3300004156	Soil	MKADLAHIQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRGTELTQAEFLATAWRLANDKARELRWIMQNK
Ga0066388_1009834841	3300005332	Tropical Forest Soil	MRPGLSDIQLTVWDDEIIVSLPGTNYAVTYYKPPNSPQLLARNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWISQKKNPVSPARRA*
Ga0066388_1024007111	3300005332	Tropical Forest Soil	MKRGLADIQLEVWDDEIIVSLPGTNYAVTYYKPPYSPQLLARNFPCEDDRRAEPTQAEFLTKAWRLANDKARELRWISQRQ*
Ga0066388_1036130901	3300005332	Tropical Forest Soil	MLGMSPKLHLFARPPNPHIRPGLSDIQLEVWDDEIIVSLPGTDYAVTYYKPANSPQLLAKYFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIVQKKSPLRETRGT*
Ga0066388_1054727251	3300005332	Tropical Forest Soil	MKRGLSDIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPSEDDTRAEPTQAEFLSKAWHLANDKARELRWISH*
Ga0066388_1080078771	3300005332	Tropical Forest Soil	MKPGLSDIQLEVWDDEIIVSLPGTNYAVTYFKPSNSPQLLAKNFPCEDDGRAEPTQAEFLATAWRLANDKARE
Ga0066905_1001875053	3300005713	Tropical Forest Soil	MEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELNWIMQKKSP*
Ga0066905_1005087133	3300005713	Tropical Forest Soil	MKSDLTHIQLEVWDDEIVVSLPGTNYVVTYYKPANSPQLLAKNFPYDDDRHTELTQAEFLARAWRLANDKARELRWILQKEDP*
Ga0066905_1019075192	3300005713	Tropical Forest Soil	MKPDSTHIKLEVWDDEIIISLPGTDYAVTYYKPANSPQLLAKNFPYDDDVRTELTQAEFLARAWRLANDKARELRWIMQKKSP*
Ga0066903_1001191834	3300005764	Tropical Forest Soil	MKPHITHFQLEVWDDEITVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDQRTGLTQAEFLARAWRLANDKARELRWVMPKKSP*
Ga0066903_1016023081	3300005764	Tropical Forest Soil	QLEVWDDEIIVSLPGTNYSVTYYKPPNSPQLLAKNFLSQDDGRAETTQAEFLTTAWHLANEKARELRWISRKENPVIPARGN*
Ga0066903_1017626211	3300005764	Tropical Forest Soil	MKPGLSDIQLKVWDDEIIVSLPGTNYAVTYYTPPNSPQLLARNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWISQKKNPVSPARRA*
Ga0066903_1029019092	3300005764	Tropical Forest Soil	MKRGLADIQLEVWDDEIIVSLPGTNYAVTYYKPPYSPQLLARNFPCEDDRRAEPTQAEFLTKAWRLANDKARELRWISQRR*
Ga0066903_1037969922	3300005764	Tropical Forest Soil	DVTHIQLEVWDDEIIVSLPGTNYIVTYYKPSNSPQLLAKNFPDDDDRRTGLTQAEFLARAWRLANDKARELRWVTQKKSP*
Ga0081455_103706831	3300005937	Tabebuia Heterophylla Rhizosphere	MKPDLTHIQLEVWDDEIVISLPGTDYAVTYYKPANSPQLLAKNFPYDDDVRSELTQAEFLARAWRLANEKARELRWILQKESP*
Ga0075015_1005164401	3300006102	Watersheds	DEIVVSLPGTSYAVAYYKPSSSPQLIARHLPPEGDDPRLSLTRAEFLAQAWRLGNDKARELGWIA*
Ga0070716_1008843261	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLATAWRLANDKARELRWIMQNKA*
Ga0075014_1001604972	3300006174	Watersheds	VTAWNLNCWMRDDEIVVSLPGTSYAVAYYKPSSSPQLLAGHLPPEGDDPRLSLTRAEFLAQAWRLGNDKARELGWIA*
Ga0075021_107006872	3300006354	Watersheds	MRDDEIVVSLPGTSYAVAYYKPSSSPQLLAGHLPPEGDDPRLSLTRAEFLAQAWRLGNDKARELGWIA*
Ga0066709_1041942591	3300009137	Grasslands Soil	MKPGLLDIQLEVWDDEIIGSLPGTDYAVTYYKPANSPQLLAKNFPHNDDGRTELKQAEFLAGAWHLANEKARELRWILQKKRP*
Ga0126374_105092181	3300009792	Tropical Forest Soil	MKRGLSDIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPSEDDTRAEPTQAEFLSKAWHLANDKARELAGFRIDPATGTDLS*
Ga0126380_122622811	3300010043	Tropical Forest Soil	SRDAEPTHTVLLSMPSPSSHTSNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP*
Ga0126384_114169442	3300010046	Tropical Forest Soil	MKPGLSDIQLEVWDDEIIVSLPGTNYAVTYFKPSNSPQLLAKNFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSPLTGTRGT*
Ga0126384_119897521	3300010046	Tropical Forest Soil	MKSDLTHIQLEVWDDEIVVSLPGTNYVVTYYKPANSPQLIAKNFPYDDDRHTELTQAEFLARAWRLANDKARELRWILHKEDP*
Ga0126382_102755073	3300010047	Tropical Forest Soil	MEPDLTHFQIEVWDDEIIVGLPGTSYAVTYYKPANSPQLLAKHFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP*
Ga0126382_106493271	3300010047	Tropical Forest Soil	MKSDLTHIQLEVWDDEIVVSLPGTNYVVTYYKPANSPQLIAKNFPYDDDRHTELTQAEFLARAWRLANDKARELRWILQKEDP*
Ga0126370_104290271	3300010358	Tropical Forest Soil	MEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKHFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP*
Ga0126372_131130331	3300010360	Tropical Forest Soil	VWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWYLANEKACELRWITQKKNPVSPARGA*
Ga0126378_107595161	3300010361	Tropical Forest Soil	MEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWI
Ga0126377_120625922	3300010362	Tropical Forest Soil	MKPGLSDIQLKVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPSEDDTGAEPTQAEFLSKAWHLANDKARE
Ga0126379_135875511	3300010366	Tropical Forest Soil	MKPGLSDIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLARNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNPVK
Ga0126383_104243121	3300010398	Tropical Forest Soil	NPRMKPGPSDIQLEVRDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWISQKKNPVSPARRA*
Ga0126383_128727901	3300010398	Tropical Forest Soil	GASRDAEPTHTVLLSMPSPSSHTSNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSRDHGAQKM*
Ga0126375_105576411	3300012948	Tropical Forest Soil	MEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKHFPYDDDRRTELTQAEFLARAWRLANDKARELRWI
Ga0126375_115813031	3300012948	Tropical Forest Soil	MKSDLTHIQLEVWDDEIVVSLPGTNYVVTYYKPANSPQLIAKNFPYDDDRHTELTQAEFLARGWRLANDKARELRWILQKEDP*
Ga0126369_102306293	3300012971	Tropical Forest Soil	MKPGLSDIQLKVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLAKEKARELRWISQKKNPVSPARRA*
Ga0132258_114657042	3300015371	Arabidopsis Rhizosphere	MKPDIAHIQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRGTELTQAEFLATAWRLANDKARELRWIMQNKST*
Ga0132255_1054847811	3300015374	Arabidopsis Rhizosphere	MKPDIAHIQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLATAWRLANDKAREL
Ga0132255_1055719611	3300015374	Arabidopsis Rhizosphere	MKRGLSDIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPSEDDTHAEPTQAEFLTKAWNLAKDKARELRWISH*
Ga0182036_100420203	3300016270	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWILQKKNPVSPVRGA
Ga0182036_103442883	3300016270	Soil	MPSPSSQTPNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSRDHGLRK
Ga0182041_112454791	3300016294	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSSLTETRRT
Ga0182041_119873012	3300016294	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWVMPKKSP
Ga0182033_100214028	3300016319	Soil	VSDIQLEVWDDEIIVSLPGTNYAVTYKPANSPQLLAKYFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSSLTETRRT
Ga0182033_100888905	3300016319	Soil	MPSPSSQTPNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP
Ga0182033_113327461	3300016319	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKDL
Ga0182034_108395842	3300016371	Soil	MKLGLSGIQLKVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0182034_109446041	3300016371	Soil	VSDIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKYFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSSLTETRRT
Ga0182040_107122562	3300016387	Soil	APKLHLFAAKPDMKLDLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0182037_110684841	3300016404	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRL
Ga0182039_118539081	3300016422	Soil	TPRRSNFQMLGMSPKLHLFARPPNPHMRPCLSDIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKYFPCEDDGRAEPTQAEFLATAWRLANDKARELPWIMQKKSPLTETRGT
Ga0182039_121671881	3300016422	Soil	MKPGVADIQLKVWDDEIIVSLPGTHYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSSLTETRRT
Ga0182039_122389781	3300016422	Soil	MKPGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWILQKKNPV
Ga0182038_104784731	3300016445	Soil	LRWDDEIIVSLPGTNYAVTYKPANSPQLLAKYFPCEDDGRAEPTQAEFLATAWHLANDKARELRWITQKKSPLTETRGT
Ga0182038_109137491	3300016445	Soil	HLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLTKAWHLANEKARELRWISQKKNPVSPVRGA
Ga0187778_101477821	3300017961	Tropical Peatland	MKPRLSDIQLEVWDEEIIVILPGTNYAVTYYKPANSPQLLAKNFPYDDDARAEPTQAEFLATAWPLANDKARELRWIVQNKSPHGT
Ga0184626_101612802	3300018053	Groundwater Sediment	LMKPGQADIHLEVCDDELIVSLPGTIYAVTYYKPANSPWLLARNFPSKDDGRADLTQAEFLSRAWHLANDKARELGWIILKKKPRC
Ga0184609_102096471	3300018076	Groundwater Sediment	MKPGLADIHLEVWDDELIVSLPGTIYAVTYYKPANSPWLLARNFPSKDDGRADLTQAEFLSRAWHLANDKARELGWIILKKKPRC
Ga0126371_108914711	3300021560	Tropical Forest Soil	MKPGLSDIQLKVWDDEIIVSLPGTNYAVTYYTPPNSPQLLARNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNPVSPARGA
Ga0126371_109797723	3300021560	Tropical Forest Soil	MKPDVTHIQLEVWDDEIIVSLPGTNYIVTYYKPSNSPQLLAKNFPDDDDGRTGLTQAEFLARAWRLANDKARELRWVTQKKSP
Ga0126371_115937453	3300021560	Tropical Forest Soil	MKSDLTHIQLEVWDDEIVVSLPGTNYVVTYYKPANSPQLIAKNFPYDDDRHTELTQAEFLARAWRLAND
Ga0126371_125766721	3300021560	Tropical Forest Soil	MKPHITHFQLEVWDDEITVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDQRTGLTQAEFLARAWRLANDKARELRWVMPKKSP
Ga0126371_126363911	3300021560	Tropical Forest Soil	MPSPSSHTSNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWILHKEDP
Ga0207862_10229852	3300027703	Tropical Forest Soil	MLGMAPKLHLFTAKPDMKPGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANDKARELRWITQKKSPLSRVRGV
Ga0318515_101716604	3300031572	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANDKARELRWIMHS
Ga0310915_102116621	3300031573	Soil	MKPDLTHFQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP
Ga0310915_108763091	3300031573	Soil	MKSDLTHIQLDVWDDEIVVSLPGTNYAVTYCKPADSPQLLAKNFPYDDDRHIELTQAEFLARAWRLANDKARELR
Ga0306917_101611374	3300031719	Soil	LRMLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0318501_107053821	3300031736	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWIMHS
Ga0306918_104219351	3300031744	Soil	MKLDLTHFQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIIAEAEPLKRFE
Ga0306918_105081471	3300031744	Soil	ELEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWVMQKKSP
Ga0306918_106895201	3300031744	Soil	MKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0318509_102229611	3300031768	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWILQKKNPVSPVRGA
Ga0318546_103920481	3300031771	Soil	MKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0318550_105554171	3300031797	Soil	GIQLKVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANDKARELRWITQKKDL
Ga0318523_104193092	3300031798	Soil	MLGMAPKLHLFAAKPDMKPGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARE
Ga0310917_109395511	3300031833	Soil	MLGMASKLHLFAAKPDMKPGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANDKARELRWIMHS
Ga0306919_111134321	3300031879	Soil	MKPHLTHFQLEVWDDEIIVILPGTSYAVTYYKPANSPQLLAKDFPYGDDRRTELTQAEFLARAWRLANDKARELRWVMPKKSP
Ga0306925_104240821	3300031890	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWVMQKKSP
Ga0306925_115642511	3300031890	Soil	MKSDLTHIQLDVWDDEIVVSLPGTNYAVRYCKPADSPQLLAKNFPYDDDRHIELTQAEFLARAWRLANDKARELR
Ga0306925_117060682	3300031890	Soil	MKPHLTHFQLEVWDDEIIVILPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTGLTQAEFLARAWRLANDKARELRWVMPKKSP
Ga0306923_107832662	3300031910	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRGTELTQAEFLACAWRLANDKARELRWVMQKKSP
Ga0306923_108383223	3300031910	Soil	MKPGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWILQKKNPVSPSRGTSNRP
Ga0306921_106897321	3300031912	Soil	MKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANDKARELRWIMHS
Ga0306921_109028741	3300031912	Soil	MEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSRDHGLRK
Ga0310912_104626343	3300031941	Soil	MLGMAPKLHLFAAKPDMKPGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNPVSPARGA
Ga0310912_104815911	3300031941	Soil	MKSDLTHIQLDVWDDEIVVSLPGTNYAVTYCKPADSPQLLAKDFPYDDDRHIELTQAEFLARAWRLANDKARELR
Ga0310916_116282031	3300031942	Soil	MKLDLTHFQLEVWDDEIIVSLPGTSYAVTYYKPANSPQPLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP
Ga0310913_101424641	3300031945	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWISQKKNPVSPARGA
Ga0310913_110475291	3300031945	Soil	MEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP
Ga0310910_102587092	3300031946	Soil	MKLDLTHFQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWIMQKQSP
Ga0310910_102838681	3300031946	Soil	MAPKLHLFAAKPDMKLGLSGIQLKVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0310910_105879082	3300031946	Soil	VSDIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSSLTETRRT
Ga0310909_103211232	3300031947	Soil	MAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKYFPCEDDGRAEPTQAEFLATAWRLANDKARELRWIMQKKSSLTETRRT
Ga0310909_106071722	3300031947	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRWVMQKK
Ga0310909_108296062	3300031947	Soil	LDIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNL
Ga0306926_105103192	3300031954	Soil	MLGMSPKLHLFARPTNPHMRPCLSDIQLEVWDDEIIVSLPGTNYAVTYKPANSPQLLAKYFPCEDDGRAEPTQAEFLATAWRLANDKARELPWIMQKKSPLTETRGT
Ga0306922_118508152	3300032001	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRRTGLTQAEFLARAWRLANDKARELRWVMPKKSP
Ga0318533_104001542	3300032059	Soil	MPSPSSQTPNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTGLTQAEFLARAWRLANDKARELRWVMPKKSP
Ga0318533_109060132	3300032059	Soil	MKPGLSDIQLKVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKDL
Ga0310890_109675941	3300032075	Soil	MKADLAHIQLEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLATAWRLANDKARELRWIMQNKS
Ga0306924_110024602	3300032076	Soil	VWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLSKAWHLANEKARELRWILQKKNPVSPVRGA
Ga0306924_112968122	3300032076	Soil	MLGMAPKLHLFAAKPDMKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANDKARELRWITQKKNPVSPARGT
Ga0306920_1000836087	3300032261	Soil	MPSPSSQTPNLQMEPDLTHFQIEVWDDEIIVSLPGTSYAVTYYKPANSPQLLAKDFPYDDDRRTGLTQAEFLARAWRLANDKARELRWIMQKQSP
Ga0306920_1014228712	3300032261	Soil	MAPKLHLFAAKPDMKRGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAELTQAEFLTKAWHLANEKARELRWIS
Ga0306920_1024797572	3300032261	Soil	EVWDDEIIVSLPGTNYAITYYKPPNSPQLLAKYFPCEDDGRAEPTQAEFLATAWHLANDKARELRWITQKKSPLTETRGT
Ga0306920_1036992611	3300032261	Soil	RCSDQPPNARHGSQIRLHYLFARSPNPHMKPDLSDIQLKVWDDEIIVSLPGTHYAVTYYKPPNSPQLLAKNFPYEDDGRAEPTQAEFLTKARHLANEEARELRWITQKKNPVSPVRGA
Ga0335081_118432963	3300032892	Soil	MKPDRAHIQLEVWDDEIIVRLPGTNYAVTYYKPANSPQLLAKNFPWDDDARTELTQGEFLATAWCLANDKAGELCWIVQRKR
Ga0310914_104854393	3300033289	Soil	MKLDLTHFQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKDFPYDDDRRTELTQAEFLARAWRLANDKARELRW
Ga0310914_110321381	3300033289	Soil	MKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPPNSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELR
Ga0310914_113903872	3300033289	Soil	MKPHLTHFQLEVWDDEIIVILPGTSYAVTYYKPANSPQLLAKDFPYGDDRRTELTQAEFLARAWRLANDKV
Ga0318519_102054511	3300033290	Soil	MKLGLSGIQLEVWDDEIIVSLPGTNYAVTYYKPANSPQLLAKNFPCEDDGRAEPTQAEFLAKAWHLANEKARELRWITQKKNPVSPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080391

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences