NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080386

Metagenome / Metatranscriptome Family F080386

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080386
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 92 residues
Representative Sequence MHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLTISAVGAEPWPDRLRTRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRA
Number of Associated Samples 91
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 19.13 %
% of genes near scaffold ends (potentially truncated) 99.13 %
% of genes from short scaffolds (< 2000 bps) 88.70 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.261 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(33.043 % of family members)
Environment Ontology (ENVO) Unclassified
(47.826 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.174 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 18.10%    β-sheet: 6.03%    Coil/Unstructured: 75.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00441Acyl-CoA_dh_1 56.52
PF02771Acyl-CoA_dh_N 16.52
PF02770Acyl-CoA_dh_M 10.43
PF00149Metallophos 5.22
PF00877NLPC_P60 3.48
PF14371DUF4412 2.61
PF13620CarboxypepD_reg 0.87
PF00266Aminotran_5 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 83.48
COG0791Cell wall-associated hydrolase, NlpC_P60 familyCell wall/membrane/envelope biogenesis [M] 3.48


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.26 %
All OrganismsrootAll Organisms41.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000531|CNBas_1014000Not Available510Open in IMG/M
3300001593|JGI12635J15846_10313798Not Available975Open in IMG/M
3300001686|C688J18823_10044827All Organisms → cellular organisms → Bacteria3055Open in IMG/M
3300002558|JGI25385J37094_10080745All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300002558|JGI25385J37094_10123457Not Available732Open in IMG/M
3300002561|JGI25384J37096_10119214Not Available888Open in IMG/M
3300002562|JGI25382J37095_10267632All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300002908|JGI25382J43887_10009137All Organisms → cellular organisms → Bacteria4966Open in IMG/M
3300002909|JGI25388J43891_1018384All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300002915|JGI25387J43893_1044856Not Available613Open in IMG/M
3300005171|Ga0066677_10469226Not Available722Open in IMG/M
3300005172|Ga0066683_10383483All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300005186|Ga0066676_10307184Not Available1051Open in IMG/M
3300005440|Ga0070705_100423908Not Available991Open in IMG/M
3300005447|Ga0066689_10031805All Organisms → cellular organisms → Bacteria2697Open in IMG/M
3300005447|Ga0066689_10121556All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300005518|Ga0070699_100041470All Organisms → cellular organisms → Bacteria3984Open in IMG/M
3300005553|Ga0066695_10221739All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300005556|Ga0066707_10261696Not Available1130Open in IMG/M
3300005569|Ga0066705_10046449All Organisms → cellular organisms → Bacteria2420Open in IMG/M
3300005575|Ga0066702_10389925Not Available849Open in IMG/M
3300005576|Ga0066708_10815062Not Available585Open in IMG/M
3300005598|Ga0066706_11177009All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300006034|Ga0066656_11089490All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300006046|Ga0066652_100493301Not Available1136Open in IMG/M
3300006046|Ga0066652_101067054All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium765Open in IMG/M
3300006173|Ga0070716_101041439Not Available649Open in IMG/M
3300006794|Ga0066658_10822611All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300007265|Ga0099794_10477260Not Available655Open in IMG/M
3300009137|Ga0066709_104545888All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300009804|Ga0105063_1045064Not Available615Open in IMG/M
3300010323|Ga0134086_10068121Not Available1226Open in IMG/M
3300010323|Ga0134086_10069652All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300010325|Ga0134064_10463496Not Available519Open in IMG/M
3300010333|Ga0134080_10149688Not Available988Open in IMG/M
3300012200|Ga0137382_10116698Not Available1779Open in IMG/M
3300012200|Ga0137382_10513278Not Available852Open in IMG/M
3300012203|Ga0137399_10222253All Organisms → cellular organisms → Bacteria1540Open in IMG/M
3300012203|Ga0137399_10594704Not Available930Open in IMG/M
3300012206|Ga0137380_10087281All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2852Open in IMG/M
3300012206|Ga0137380_10841634Not Available790Open in IMG/M
3300012208|Ga0137376_10038559All Organisms → cellular organisms → Bacteria3845Open in IMG/M
3300012208|Ga0137376_10583045Not Available968Open in IMG/M
3300012208|Ga0137376_10583568Not Available968Open in IMG/M
3300012208|Ga0137376_10741506Not Available847Open in IMG/M
3300012211|Ga0137377_10105349All Organisms → cellular organisms → Bacteria2675Open in IMG/M
3300012211|Ga0137377_11746847Not Available543Open in IMG/M
3300012211|Ga0137377_11830687Not Available526Open in IMG/M
3300012211|Ga0137377_11942956Not Available505Open in IMG/M
3300012224|Ga0134028_1200633Not Available530Open in IMG/M
3300012285|Ga0137370_10147630All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1358Open in IMG/M
3300012285|Ga0137370_10422032Not Available810Open in IMG/M
3300012349|Ga0137387_11219709Not Available530Open in IMG/M
3300012351|Ga0137386_10110270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1952Open in IMG/M
3300012351|Ga0137386_10369463Not Available1032Open in IMG/M
3300012354|Ga0137366_10086282All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2385Open in IMG/M
3300012359|Ga0137385_11004595All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium688Open in IMG/M
3300012362|Ga0137361_10667428Not Available951Open in IMG/M
3300012362|Ga0137361_11929502All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300012363|Ga0137390_10394449All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300012363|Ga0137390_10608727Not Available1060Open in IMG/M
3300012409|Ga0134045_1370883Not Available530Open in IMG/M
3300012469|Ga0150984_121431024Not Available561Open in IMG/M
3300012683|Ga0137398_10838234Not Available642Open in IMG/M
3300012917|Ga0137395_10253009Not Available1238Open in IMG/M
3300012918|Ga0137396_10271642All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300012918|Ga0137396_10888879Not Available653Open in IMG/M
3300012923|Ga0137359_10400013All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300012925|Ga0137419_10897246Not Available730Open in IMG/M
3300012930|Ga0137407_10566408Not Available1064Open in IMG/M
3300012972|Ga0134077_10474176Not Available551Open in IMG/M
3300012976|Ga0134076_10382518Not Available624Open in IMG/M
3300014154|Ga0134075_10138244Not Available1039Open in IMG/M
3300014166|Ga0134079_10203588Not Available831Open in IMG/M
3300014166|Ga0134079_10459612Not Available605Open in IMG/M
3300015241|Ga0137418_10430004Not Available1071Open in IMG/M
3300015359|Ga0134085_10544070All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300017656|Ga0134112_10191814Not Available797Open in IMG/M
3300017657|Ga0134074_1378657Not Available525Open in IMG/M
3300017659|Ga0134083_10156473Not Available925Open in IMG/M
3300018056|Ga0184623_10409079Not Available595Open in IMG/M
3300018077|Ga0184633_10036756All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2472Open in IMG/M
3300018431|Ga0066655_10523208All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium789Open in IMG/M
3300018433|Ga0066667_10231592All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300018468|Ga0066662_11536585All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300018482|Ga0066669_11270315Not Available665Open in IMG/M
3300021086|Ga0179596_10707053Not Available510Open in IMG/M
3300025965|Ga0210090_1003085All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2186Open in IMG/M
3300026277|Ga0209350_1044336All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300026295|Ga0209234_1014416All Organisms → cellular organisms → Bacteria2991Open in IMG/M
3300026295|Ga0209234_1265686Not Available554Open in IMG/M
3300026304|Ga0209240_1213177All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium585Open in IMG/M
3300026312|Ga0209153_1196179Not Available714Open in IMG/M
3300026324|Ga0209470_1075095All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1562Open in IMG/M
3300026324|Ga0209470_1121760Not Available1158Open in IMG/M
3300026324|Ga0209470_1151739Not Available1017Open in IMG/M
3300026329|Ga0209375_1058956All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1872Open in IMG/M
3300026334|Ga0209377_1209498All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300026530|Ga0209807_1125768All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300026532|Ga0209160_1225422Not Available654Open in IMG/M
3300026548|Ga0209161_10406965All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300027775|Ga0209177_10163527All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium765Open in IMG/M
3300027873|Ga0209814_10398186All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300027875|Ga0209283_10800217Not Available580Open in IMG/M
3300027875|Ga0209283_10916054Not Available529Open in IMG/M
3300027954|Ga0209859_1026874Not Available981Open in IMG/M
3300028072|Ga0247675_1042852Not Available668Open in IMG/M
3300028536|Ga0137415_10317976All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300028884|Ga0307308_10380771Not Available676Open in IMG/M
3300031720|Ga0307469_10598285Not Available985Open in IMG/M
3300031720|Ga0307469_10825830Not Available852Open in IMG/M
3300031820|Ga0307473_10655375Not Available732Open in IMG/M
3300031908|Ga0310900_11481356All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300033407|Ga0214472_10029725All Organisms → cellular organisms → Bacteria5618Open in IMG/M
3300033813|Ga0364928_0152066Not Available567Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil33.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil13.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil13.04%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.74%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.74%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.87%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.87%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000531Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300002915Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025965Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300028072Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
CNBas_101400013300000531Quercus RhizosphereMHLALLLVLAQTQLVDIQNLTPREHRVSVFVITAPQDLKLSAVAAEPWPDQLRSRDDEHWQDDEQTTWPAAAW
JGI12635J15846_1031379813300001593Forest SoilMTAMPLTLLLACSTVLVQAPVQTIVDIHGLTPREHRVAAFVLAAPQELRVTAVGAEPRPRRLQQDRDAERWQDDEQTTWPAAAWILDARTRAV
C688J18823_1004482743300001686SoilMTLALLLVLVQNPTLVDIRNLTPHEHRVAGFVLPSAQEVNITAVGAEPWPDRLRSRDDDQWQDDEQTTWPA
JGI25385J37094_1008074523300002558Grasslands SoilMPLALLLVLAQTQLVDIQNLAPRELRVSAFVLTAPQDLKVSAVGAEPWPDRLRSRDDEHWQEDEQTTWPAAAWILDARTRAVVWDLRAVDT
JGI25385J37094_1012345723300002558Grasslands SoilMTAMPLALLLALAQTPAPPPALVDMRDLTPREHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTH
JGI25384J37096_1011921423300002561Grasslands SoilMHLALLLILAQTQLVDIQNLTPRELRVSAFVLTAPQDLTLSAVGAEPWPDRLRTRDDEHWQDDEQTTW
JGI25382J37095_1026763213300002562Grasslands SoilMSAMPLVLLLLLAQTQGPPTTPILADIHDLTPREHQVSVFVLTAAQDVQIAAVGAEPWPDRLRQRDDEHWQDDEQTTWPAAA
JGI25382J43887_1000913713300002908Grasslands SoilMHLALLLVLAQTQLVDIQSLTPREHRVSVFVLTAPQDLKLSAVGAEPWPDRLRSRDDEHWQEDEQTTWPAAAWI
JGI25388J43891_101838423300002909Grasslands SoilMPLALLLALAQTPAPPPALVDMRDLTPREHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTHAVVWDLRAADTRRESNGLRHFAGSVRLPAGTYEAHYAFYPAAAMSFK
JGI25387J43893_104485623300002915Grasslands SoilMRPVMTAMPLSLLLALVQNPAPSPALVDXRDLSPHEHRAAVFVLTTSQEVKISAVGAEPWPDKLRARDDEHWQDDEQTTWPAAAWILDARTHALV
Ga0066677_1046922623300005171SoilMPLACLLVLAQMQLVDMQNLTTREHRVSVFVLPAAQEVQITAVGAEPWPDRLRNRGDEDWRDDEQTTWPAAAWILDAKTRSVIWDLRSVDT
Ga0066683_1038348313300005172SoilMTLALLLVLAQSPTLVDIRDLPPREHRVSGFMLTAPQELRITAVGAEPWPDRLQSRDEADWQDDEQTTWPAAAWILDAKTRAVVWDLRAADTRRES
Ga0066676_1030718413300005186SoilMSAMPLMLVLLLAQAQGAAPVLVDIRDLTPREYRASAFVLTAPQDVQITAVGAEPWPDRLRQRDEKHWQDDDQTTWPAAAWILDARTRAVVWDLRSAETRRES
Ga0070705_10042390823300005440Corn, Switchgrass And Miscanthus RhizosphereMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLKLLAVAAEPWPDQLRSRDDDHWQDDEQTTWPAAAWILDARTRA
Ga0066689_1003180513300005447SoilMPLVLLLLLAQTQGPPATPILADIHDLTPREHQVSVFVLTAAQDVQIAAVGAEPWPDRPRQRDNEHWQDDEQTTWPAAAWILDARTRAVVWDLRSA
Ga0066689_1012155623300005447SoilMPLALLLVLAQTPLVDIQHLAPRELRVSAFVLTAPQDLKVSAVGAEPWPDRLRSRDDEHWQEDEQTTWPAAAWILDARTRAVVWDLRAVDTRRE
Ga0070699_10004147053300005518Corn, Switchgrass And Miscanthus RhizosphereMPLVLLLLLAQTQGPLPSPILADIHDLTPREHHVSVFVLTAPQDVQIAAVGAEPWPDRLRQRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRSADT
Ga0066695_1022173913300005553SoilMQLALLLVLAQTQLVDIQNLSPREYRVSGFVLTAPQDLKLSAIGAEPWPDRLRSRDDEHWQDDEQTTW
Ga0066707_1026169623300005556SoilMTAMPLALLLALAQTPAPPPALVDMRDLSPHEHRAAVFVLTTSQELKLSAVGAEPWPDQLRTRDAEHWQDDEQTTWPAAAWILDARTRAVVWD
Ga0066705_1004644913300005569SoilMTAMSLPLLLFLAQTQLVDIQDLTPREHRVSVFVLPGAQDVQVTAVGAEPWPDRLRTRDDAHWQDDEQTTWPAAAWILDAR
Ga0066702_1038992523300005575SoilMTAMPLSLLLALVQNPAPSPALVDIRDLSPHEHRAAVFVLTTSQEVKISAVGAEPWPDKLRARDDEHWQDDEQTTWPAAAWIL
Ga0066708_1081506223300005576SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLTLSAVAAEPWPDRLRSRDDEHWQDDEQTTWP
Ga0066706_1117700913300005598SoilMPLALLLALAQTPAPPPALVDMRDLSPHEHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTHAVVWDLRAADTRRESNGLRHFAGSVRLSAGTYEAHYAF
Ga0066656_1108949013300006034SoilMHLAILLALVQAPPPQTPQAPALVDIHDLTPQEYRVSAFILSAPQELKLSAVGAEPWPDRLRNRDERRWQDDEQTTWPAAA
Ga0066652_10049330123300006046SoilMPLALLLVLAQTPLVDIQNLGTRDHRVSVFVLTSPQALSITATGAEPWPDRLHERDDAHWQDDEQTTWPAAAWILDARTRAVVWDLRSVDTRRESNGLR
Ga0066652_10106705413300006046SoilMHLALLLVLAQTQLVDIQNLSPREYRVSGFVLTAPQDLKLSAIGAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRSVDTRRESNGLRRFSGTVHL
Ga0070716_10104143913300006173Corn, Switchgrass And Miscanthus RhizosphereMPLVLLLLLAQTQGPLPSPILADIHDLTPREHHVTVFVLTAPQDVQIAAVGAEPWPDRLRQRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRSADTRRESNGLRRFSGGVH
Ga0066658_1082261123300006794SoilQNLGPRELRVSAFVLAAPQDLKVTAVGAEPWPDRLRSREDEHWQEDEQTTWPAAAWILDARTRAVVWDLRAVDTRRESNGLRGASIRRVVCA*
Ga0099794_1047726023300007265Vadose Zone SoilMGLPLLLVLAQTQLVDIQDLTPREHRVSVFVLTAPQDVQVTAVGAEPWPDQLRARDDAHWQDDEQTTWPAAAWILDARTRAVVWD
Ga0066709_10454588813300009137Grasslands SoilMTLALLLVLAQSPTLVDIRDLPPREHRVSGFMLTAPQELRITAVGAEPWPDRMQSRDEADWQDDEQTTWPAAAWILDAKTRAVVWDLRAADTRRDSNGLRR
Ga0105063_104506423300009804Groundwater SandMHLALLLVLAQSQTFVDIRDLDTQEHRMAAFVLAAPQELKIMAVGAEPWPDRLRARDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRAVDTRR
Ga0134086_1006812113300010323Grasslands SoilMSAMPLMLVLLLAQAQGAAPVLVDIRDLTPREYRASAFVLTAPQDVQITAVGAEPWPDRLRQRDEKHWQDDDQTTWPAAAWILDARTRAVVWDLRSAETRRESNGLRRFSGTVH
Ga0134086_1006965233300010323Grasslands SoilMHLALLLVLAQTQLVDIQNLSPREYRVSGFVLTAPQDLKLSAIGAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRSVDTRRE
Ga0134064_1046349623300010325Grasslands SoilMTLALLLVLAQSPTLVDIRDLPPREHRVSGFMLTAPQELRITAVGAEPWPDRLQSRDEADWQDDEQTTWPAAAWILDAKTRAVVWDLRAA
Ga0134080_1014968823300010333Grasslands SoilMTAMPLALLLALAQTPALPPALVDMRDLTPREHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTHAVVWDLRAADTRRES
Ga0137382_1011669833300012200Vadose Zone SoilMHLALLLVLAQTQLVDIQNLTTREYRVSGFVLTAPQDLKLSAIGAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILDARTRAV
Ga0137382_1051327813300012200Vadose Zone SoilMHLALLLVLAQTQLVDIQNLSPREYRVTGFVLTAPQDLKLSAIGAEPWPDRLRSRDDEHWQDDEQTTWPA
Ga0137399_1022225313300012203Vadose Zone SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLKLSAVAAEPWPDRLRNRDDEHWQDDEQTTWPAAAWILDARTRAVVWDMRAVDTRRESNGLRRFSGTVH
Ga0137399_1059470423300012203Vadose Zone SoilMHLALLLVLAQTQLVDLQNLTPREHRVSGFVLTVPQDLTLSAVAAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILDARTRAVVWDMRAVDTRRESNGL
Ga0137380_1008728143300012206Vadose Zone SoilMGLPLLLFLAQTQLVDIQDLTPREHRVSVFVLTAAQDVQVTAVGAEPWPDRLRTRDDAHWQDDEQTTWPAAAWILDAR
Ga0137380_1084163413300012206Vadose Zone SoilMSAMPLMLVLLLAQAQGAAPVLVDIRDLTPREYRASAFVLTAPQDVQITAVGAEPWPDRLRQRDEKHWQDDDQTTWPAAAWILDARTRAVVWDLRSAETRRESTGLRRFSGTVHL
Ga0137376_1003855913300012208Vadose Zone SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLTISAVGAEPWPDRLRTRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRA
Ga0137376_1058304513300012208Vadose Zone SoilMHLALFLVLAQTQLVDIQNLTPREHRVSVFVLAAPQDLKLSAVGAEPWPDRLRSRDDDSWQDDEQTTWPAAAWILDTRTRAVVWDMRAVDTR
Ga0137376_1058356813300012208Vadose Zone SoilMHLALFLVLAQTQLVDIQNLAPREHRVSVFVLAAPQDLKLSAVGAEPWPDRLRSRDDDSWQDDEQTTWPAAAWILDTRTRAVVWDMRAVDTR
Ga0137376_1074150613300012208Vadose Zone SoilMHLALLLVLAQTQLVDIQNLSPREYRVTGFVLTAPQDLKLSAIGAEPWPDRLRSRDDEHWQDDEQTTW
Ga0137377_1010534913300012211Vadose Zone SoilMPFIALLLLAQTQGPILVEIHDLSSREHHSGFFVLTTPQEVQITAVGAEPWPDRLRQRDDEHWQDDDQTTWPAAAWILDAKTRAVVWDLRSADTRRESNGLRRF
Ga0137377_1174684723300012211Vadose Zone SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLAAPQDLKISAVGAEPRPDRLRSRDDDNWQDDEQTTWPAAAWILDART
Ga0137377_1183068713300012211Vadose Zone SoilMHLALFLVLAQTQLVDIQNLTPREHRVSVFVLAAPQDLKLSAVGAEPWPDRLRSRDDDNWQDDEQTTWPAAAWILDARTRAVVWDMR
Ga0137377_1194295613300012211Vadose Zone SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLAAPQDLRISAVGAEPRPDRLRSRDDDNWQDDEQTTWPAAAWILDART
Ga0134028_120063313300012224Grasslands SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLTISAVGAEPWPDRLRTRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRAVDTRRDSD
Ga0137370_1014763013300012285Vadose Zone SoilMGLPLLLFLAQTQLVDIQDLTPREHRVSVFVLTAVQDVQVNAVGAEPWPDRLRTRDDAHWQDDEQTTWPAAAWILDARTRAVVWDIRSVDT
Ga0137370_1042203223300012285Vadose Zone SoilMSAMHLALLLVLAQTPLVDIQNLTPREHRVSVFVITAPQDLKVLAVAAEPWPDQLRSRDDEHWQDDEQTTWPAAAWIL
Ga0137387_1121970913300012349Vadose Zone SoilMHLVLLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLKISAVGAEPWPDRLRTRDDEHWQDDEQTTWPAAAWILDA
Ga0137386_1011027033300012351Vadose Zone SoilMSAMPLMLVLLLAQAQGAAPVLVDIRDLTPREYRASAFVLTAAQDVQITAVGAEPWPDRLRQRDEKHWQDDDQTTWPAAAWILDARTRAVVWDLRSAETRRESTGLRRFSGTVHL
Ga0137386_1036946323300012351Vadose Zone SoilMHLVLLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLKISAVGAEPWPDRLRTRDDEHWQDDEQTTWPAAAWILD
Ga0137366_1008628213300012354Vadose Zone SoilMLLAILLAVAQVQAPQAPALVDIHDLRPQEYRVSTFMLSAPQELKLSAVGAEPWPDRLRNRDERRWQDDEQTTWPAAAWILDARTRAVVWDLRS
Ga0137385_1100459523300012359Vadose Zone SoilMTAMGLPLLLFLAQTQLVDIQDLTPREHRVSVFVLTAAQDVQVTAVGAEPWPDRLRSRDDAHWQDDEQTTWPAAAWILDAR
Ga0137361_1066742823300012362Vadose Zone SoilMSAMPLALLLLLAQTQGPILVDIHDLTPREHQVTAFVLTAPQDVQITAVGAEPWPDRLRDRDERHWQDDQQTTWPAAAWILDARTRAVVWDIRSAETRRESNGLRHFDGTIRL
Ga0137361_1192950223300012362Vadose Zone SoilMGLPLLLFLAQTQLVDIQDLTPREHRVNVFVLTAAQDLQVTAVAAEPWPDRLRSRDDAHWQDDEQTTWPAAAWILDAR
Ga0137390_1039444913300012363Vadose Zone SoilMHLALLLVLAQTQLVDIQNLAPRELRVSAFVLTAPQDLKVSAVGAEPWPDRLRTRNDEHWQEDEQTTWPAAAWILDARTRAVVWDLRAVETRRESNGLR
Ga0137390_1060872723300012363Vadose Zone SoilMHLALLLVLAQTQLVDIQNLAPRELRVSAFVLTVPQDLKVSAVGAEPWPDRLRTRDDQLWQEDEQTTWPAAAWILDARTRAVVWDLRAVETRRESNGLR
Ga0134045_137088323300012409Grasslands SoilMHLVLLLVLAQTQLVDIQNLTPREHRVSVFVLAAPQDLKISAVGAEPRPDRLRSRDDDNWQDDEQTTW
Ga0150984_12143102423300012469Avena Fatua RhizosphereMTLALLLVLVQNPTLVDIRNLTPHEHRVAGFVLPSAQEVTITAVGAEPWPDRLRSRDDDQWQDDEQTTWPAAAWILDATTRSVVWDLRAVETRRESNG
Ga0137398_1083823413300012683Vadose Zone SoilMHLALLLVLAQTPLVDIQNLTPREHRVSVFVITEPQDLKVLAVAAEPWPDQLRSRDDEHWQDDEQPTWPAAACILDARTRAVVLDMR
Ga0137395_1025300913300012917Vadose Zone SoilMGLPLLLVLAQTQLVDIQDLTPREHRVSVFVLTAPQDVQVTAVGAEPWPDQLRARDDAHWQDDEQTTWPAAAWILDARTRAVVWDIRAVDT
Ga0137396_1027164213300012918Vadose Zone SoilMPLALLLVLAQTPLVDLQNLSPREYRVSGFVLMAPQDLNLSAIGAEPWPDRLRSRDDEHWQDDEQTTWPA
Ga0137396_1088887913300012918Vadose Zone SoilMHLALLLVLAQTQLVALQNLTPREHRVSGFVLTAPQDLTLSAVAAEPWPDRLRSRDDAHWQDDEQTTWPAAAWILDARTRAVVWDMRAVDTRRESNGLRRFSGTV
Ga0137359_1040001313300012923Vadose Zone SoilMHLALLLVLAQTPLVDIQNLTPREHRVSVFVITEPQDLKVLAVAAEPWPDQLRSRDDEHWQDDEQTTWPAAA
Ga0137419_1089724613300012925Vadose Zone SoilMHLALLLVLAQTPLVDIQNLTPREHRVSVFVITEPQDLKVLAVAAEPWPDQLRSRDDEHWQDDEQTTWPAAAWILDARTRA
Ga0137407_1056640813300012930Vadose Zone SoilMHLALLLVLAQSPLVDIQNLSPRDHRVSVFVLAVPQDLKVSAVGAEPWPDRLRSRDDENWQDDEQTTWPAAAWVLDARTRAVVW
Ga0134077_1047417613300012972Grasslands SoilMPFIALLLLAQTQGPILVDIHDLSPREHHSGFFVLTRPQEVQITAVGAEPWPDRLRQRDDEHWQDDDQTTWPAAAWILDAKTRAVVWD
Ga0134076_1038251823300012976Grasslands SoilMTLALLLALAQSPTLVDIRDLPPREHRVSGFMLTAPQELRITAVGAEPWPDRLQSRDGADWQDDEQTTWPAAAWILDAKTRAVVWDLRAADTRRESNGLRRFSG
Ga0134075_1013824423300014154Grasslands SoilMHLALLLVLAQTQLVDIQNLTAREHRVSVFVLEAPQDLKVSAVGAEPWPDRLRSRDDDNWQDDEQTTWPAAAWIL
Ga0134079_1020358813300014166Grasslands SoilMHLALLLVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLTLSAVAAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILD
Ga0134079_1045961213300014166Grasslands SoilMILPLLLALQAQVLVNIQDLSPQEHRSAAFALSAPQEIRITAIGAEPWPDQYRTRDERDWQDDEQTTWPAAAWILDAQTRAVVWDLRS
Ga0137418_1043000413300015241Vadose Zone SoilMHLALLLVLAQTPLVDIQNLTPREHRVSVFVITEPQDLKVLAVAAEPWPDQLRSRDDEHWQDDEQTTWPAAAWILNARTRAVVWDMRAVDTRRESNGL
Ga0134085_1054407023300015359Grasslands SoilMHLALLLVLAQTPLVDIQNLTPREHRVSVFVLTAPQDLTLSAVGAEPWPDRLRTRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRAVDTRRESNGLRRFSGTVRLPA
Ga0134112_1019181413300017656Grasslands SoilMSAMLLMLLLLWAQTQGPAPILVNIHDLTPREYRTSGFVLPVAQDVQITAVGAEPWPDRLREPDERQWQDDEQTTWPAAAWILDV
Ga0134074_137865723300017657Grasslands SoilMPLALLLVLAQTPLVDIQNLGTRDHRVSVFVLTSPQALSITATGAEPWPDRLHERDDAHWQDDEQTTWPAAAW
Ga0134083_1015647323300017659Grasslands SoilMSAMLLMLLLLWAQTQGPAPILVNIHDLTPREYRTSGFVLPVAQDVQITAVGAEPWPDRLREPDERQWQDDEQTTWPAAAWILDVRTRAVVWDLRSAETRRESN
Ga0184623_1040907913300018056Groundwater SedimentMTLALLLALQVQTIVEIHDLTPREHRVAVFVLAAPQALRVTAVGAEPRPQRLRRDRDGDTWQDDEQTTWP
Ga0184633_1003675613300018077Groundwater SedimentMTLALLLALQVQTIVEIHDLTPREHRVAVFVLAAPQALRVTAVGAEPRPERLRRDRDGDTWQDDEQTTWPAAAWILDARTRAVVWDLRAVDTERSPNGLRRFSGTVQLPAGV
Ga0066655_1052320823300018431Grasslands SoilMHLAILLALVQAPPPQTPQAPALVDIHDLTPQEYRVSAFILSAPQELKLSAVGAEPWPDRLRNRDERRWQDDEQTTWPAAAWI
Ga0066667_1023159223300018433Grasslands SoilMILPLLLALQAQVLVNIQDLSPQEHRSAAFALSAPQEIRITAIGAEPWPEQYRTRDERDWQDDEQTTWPAAAWILDAQTRAVVWDLRSVETEKTSYCLRRI
Ga0066662_1153658523300018468Grasslands SoilMPLALLLVLAQTQLVDIQNLAPRELRVSAFVLTAPQDLKVSAVGAEPWPDRLRSRDDEHWQEDEQTTWPAAAWILDARTRAVVWDLRAVDTRRESNGLRRFSGTVHLPAANSE
Ga0066669_1127031523300018482Grasslands SoilMPFIALLLLAQTQGPILVDIHDLSPREHHSGFFVLTRPQEVQITAVGAEPWPDRLRQRDDEHWQDDDQTTWPAAAWILDAKTRAVVWDLRSADTRRE
Ga0179596_1070705323300021086Vadose Zone SoilMPLVLLLLLAQTQGPLPSPILADIHDLTPREHHVSVFVLTAPEDVQIAAVGAEPWPDRLRQRDDEHWQDDEQTTWPAAAWILDARTRAVVWDL
Ga0210090_100308513300025965Natural And Restored WetlandsMTAMSLALLFVLTQTQPLVDIQNLTQHEHRMSGFVLAVPQELKIQAVGAEPWPDRLRTREDEGWQDDEQTTWPAA
Ga0209350_104433613300026277Grasslands SoilMTAMPLALLLALAQTPAPPPALVDMRDLTPREHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTHAVVWDLRAADTRRESNGLRHFAGSVRLPAGTYEAHYAFYPAAAM
Ga0209234_101441643300026295Grasslands SoilMTAMPLALLLALAQTPAPPPALVDMRDLTPREHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTHAVVWDLRAAD
Ga0209234_126568623300026295Grasslands SoilMPLALLLVLAQTQLVDIQNLAPRELRVSAFVLTAPQDLKVSAVGAEPWPDRLRSRDDEHWQEDEQTTWPAAAWILDARTRAG
Ga0209240_121317723300026304Grasslands SoilMTAMSLPLLLLLAQTQLVDIQDLTPREHRVSVFVLTAAQDVQVTAVGAEPWPDRLRPRDDAHWQDDEQTTWPAAAWILDARARAVVWDIR
Ga0209153_119617923300026312SoilMTAMPLSLLLALAQNPAPNPALVDIRDLSPHEHRAAVFVLTTPQEVKISAVGAEPWPDKLRARDDEHWQDDEQTTWPAAAWILDAR
Ga0209470_107509533300026324SoilMHLAILLALIQAPPPQTPQAPALVDIHDLTPQEYRVSAFILSAPQELKLSAVGAEPWPDRLRNRDERRWQDDEQTTWPAAAWILDARTRAVVWDLRSAETRRESNGL
Ga0209470_112176013300026324SoilMSAMLLMLLLLWAQTQGPAPILVNIHDLTPREYRTSGFVLPVAQDVQITAVGAEPWPDRLREPDERQWQDDEQTTWPAAAWILDVRTRAVVWDLRSAETRRES
Ga0209470_115173913300026324SoilMPLMLVLLLAQAQGAAPVLVDIRDLTPREYRASAFVLTAPQDVQITAVGAEPWPDRLRQRDEKHWQDDDQTTWPAAAWILDARTRAV
Ga0209375_105895613300026329SoilMTFALLLVLAQSPTLVDIRDLPPREHRVSGFMLTAPQELRITAVSAEPWPDRLQSRDEADWQDDEQTTWPAA
Ga0209377_120949813300026334SoilMPLMLVLLLAQAQGAAPVLVDIRDLTPREYRASAFVLTAPQDVQITAVGAEPWPDRLRQRDEKHWQDDDQTTWPAAAWILDARTRAVVWDLRSAETRRESTGLRRFSGTVHL
Ga0209807_112576813300026530SoilMTAMSLPLLLFLAQTQLVDIQDLTPREHRVSVFVLPGAQDVQVTAVGAEPWPDRLRTRDDAHWQDDEQTTWPAAAWILDARTRAVVWDI
Ga0209160_122542213300026532SoilMHLALVLVLAQTQLVDIQNLTPREHRLSVFVLAAPQDLKVSAVGAEPWPDRLRSRDDDNWQDDEQTTWPAAAWILDTRTRA
Ga0209161_1040696513300026548SoilMTAMPLALLLALAQTPAPPPALVDMRDLSPHEHRAAVFVLTTSQEVNVSAVGAEPWPDQLRTRDDQHWQDDEQTTWPAAAWIIDARTHAVVWDLRAADTRRESNGLRHFAGSVRLSAGTY
Ga0209177_1016352723300027775Agricultural SoilMVPALFLLLVQTQVPTPLVDIQNLTPREHQVSVFVLAGAQDVTISAVGAEPWPDRLRTRDDAHWQDDEQTTWPAAAWILDTRTRAVVWDIRSVD
Ga0209814_1039818613300027873Populus RhizosphereMPFIALLLLAQTQGPILVDIHDLSPREHHSGFFVLAAPQEVQITAVGAEPWPDKLRERDDQHWQDDDQTTWPAAAWILDVKTRAVVWDLRSADTRREANGLRRFSGGVRLPPPARVFLTSVIALCESSRDRPPGCVG
Ga0209283_1080021713300027875Vadose Zone SoilMSAMPLPLLLVLAQTQLVEIQNLAPRELRVSAFVLTAPQDLKVSAVGAEPWPDRLRSRDDEHWQEDEQTTWPAAAWILDART
Ga0209283_1091605423300027875Vadose Zone SoilMHLALLIVLAQTQLVDIQNLTPREHRVSVFVLTAPQDLKLSAVGAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILDARTRA
Ga0209859_102687413300027954Groundwater SandMTLALLLVLVQSQTIVDIRDLTPSEHRMSAFVLTAPQEIKIVAVGAEPWPDRLRSRDDQHWQDDEQTTWPAAAWILDARTRAVVWDLRAVDTRRESNGLRRF
Ga0247675_104285223300028072SoilMNLVLLLLLAQTQAVPPAPQPLVEIQNLSTREHRMTAFVLTTAQELTITAVGAEPWPDRLHSRDEEGWDEDEQTMWPAAAWILDARTRAVVWDLRAADTRRESNGLRRFSGTLRLPAGT
Ga0137415_1031797623300028536Vadose Zone SoilMPLAFLLALAQAPVPSPTPALVDIRDLSPREHREAVFVLTTAQEVKLSVVGAEPWPDQLRTRDDAHWQDDEQTTWPAAAWILDARTRAVVWDLRAADTRRESNGLRHFAGSVRL
Ga0307308_1038077123300028884SoilMHLALLLVLAQTQLVDIQNLSPREYRVSGFVLTAPQDLKLSAVGAEPWPDRLRSRDDEHWQDDEQTTWPAAAWILDARTRAV
Ga0307469_1059828513300031720Hardwood Forest SoilMPLALLLLLAQTQGPPATPILADIHDLTPREHQVSVFVLTAAQDVQIAAVGAEPWPDRLRQRDDEHWQDDEQTTWPAAAWILDARTRAVVWDLRSADTRRESNGLRRFSGG
Ga0307469_1082583023300031720Hardwood Forest SoilMTLALLLVLAQSPTLVDIRDLPPREHRVSGFVLTAPQEVRITAVGAEPWPDRLQSRDDADWQDDEQTTWPAAAWILDAK
Ga0307473_1065537523300031820Hardwood Forest SoilMILALLLVLAQNPTLVDIRDLPPREHRVSGFMLTAPQDVRITAVGAEPWPDRLQSRDEADWQDDEQTTWPAAAWILDAKTRAVVWDLRAADTRRESN
Ga0310900_1148135613300031908SoilMNLVLLLLLAQTQAVPPAPQPLVDIQNLSTREHRMTAFVLTTAQELTITAVGAEPWPDRLHSRDEEGWDEDEQTMWPAAAWILDARTRAVVWDLRAADTRRESNGLRRFSGTLRLS
Ga0214472_1002972573300033407SoilMTLALLLVLAQSQTIVDIRDLTPREHRMSAFVLTAPQELKITAVGAEPWPDRLRRRDDEHWEDDEQTTWPAAAWILD
Ga0364928_0152066_3_2453300033813SedimentMTLALLLVLVQAQTIVDIRDLTPSEHRMSAFVLTAPQEIKIAAVGAEPWPDRLRSRDDQHWQDDEQTTWPAAAWILDARTR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.