Metagenome / Metatranscriptome Family F080365

Basic Information
Family ID	F080365
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	65 residues
Representative Sequence	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Number of Associated Samples	103
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.70 %
% of genes near scaffold ends (potentially truncated)	35.65 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Bacteria (50.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.522 % of family members)
Environment Ontology (ENVO)	Unclassified (26.087 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.391 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.04% β-sheet: 0.00% Coil/Unstructured: 86.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02397	Bac_transf	39.13
PF00072	Response_reg	11.30
PF00990	GGDEF	3.48
PF00535	Glycos_transf_2	1.74
PF02245	Pur_DNA_glyco	1.74
PF01936	NYN	0.87
PF13579	Glyco_trans_4_4	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	39.13
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	1.74
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.43 %
Unclassified	root	N/A	48.70 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	24.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	24.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	23.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	23.48 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.87 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	22.61 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.87 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.87 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.87 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.87 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Hymenoptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apocrita	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Aculeata	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea → Apidae	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea → Apidae → Apinae	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apini	tribe	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea → Apidae → Apinae → Apini	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apis	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea → Apidae → Apinae → Apini → Apis	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	22.61 %
Apis mellifera	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea → Apidae → Apinae → Apini → Apis → Apis mellifera	0.87 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.87 %
Methylocystis sp. NLS-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10275230	Not Available	531	Open in IMG/M
3300001686\|C688J18823_10388526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	904	Open in IMG/M
3300002568\|C688J35102_118605985	Not Available	576	Open in IMG/M
3300003267\|soilL1_10008601	All Organisms → cellular organisms → Bacteria	12872	Open in IMG/M
3300003267\|soilL1_10055572	All Organisms → cellular organisms → Bacteria	9272	Open in IMG/M
3300003321\|soilH1_10019541	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300004157\|Ga0062590_102250735	Not Available	572	Open in IMG/M
3300004463\|Ga0063356_100611713	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300004479\|Ga0062595_101646887	Not Available	601	Open in IMG/M
3300005328\|Ga0070676_10845454	Not Available	678	Open in IMG/M
3300005329\|Ga0070683_100727337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	951	Open in IMG/M
3300005336\|Ga0070680_100625341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	925	Open in IMG/M
3300005338\|Ga0068868_100764395	Not Available	869	Open in IMG/M
3300005441\|Ga0070700_101081021	Not Available	664	Open in IMG/M
3300005456\|Ga0070678_101859334	Not Available	568	Open in IMG/M
3300005457\|Ga0070662_100793919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	805	Open in IMG/M
3300005562\|Ga0058697_10618525	Not Available	568	Open in IMG/M
3300005578\|Ga0068854_100130129	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005616\|Ga0068852_102661437	Not Available	520	Open in IMG/M
3300005844\|Ga0068862_101964428	Not Available	595	Open in IMG/M
3300005937\|Ga0081455_10008928	All Organisms → cellular organisms → Bacteria	10360	Open in IMG/M
3300005937\|Ga0081455_10308286	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1132	Open in IMG/M
3300006173\|Ga0070716_101716620	Not Available	518	Open in IMG/M
3300006358\|Ga0068871_100663201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	953	Open in IMG/M
3300006845\|Ga0075421_100017416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8989	Open in IMG/M
3300006845\|Ga0075421_102253877	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Aculeata → Apoidea → Apidae → Apinae → Apini → Apis → Apis mellifera	573	Open in IMG/M
3300006881\|Ga0068865_100974851	Not Available	741	Open in IMG/M
3300009094\|Ga0111539_10461965	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300009156\|Ga0111538_10192125	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300009174\|Ga0105241_11285912	Not Available	696	Open in IMG/M
3300009789\|Ga0126307_10234842	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300009840\|Ga0126313_10097642	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300009840\|Ga0126313_10714508	Not Available	812	Open in IMG/M
3300010037\|Ga0126304_10174126	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300010037\|Ga0126304_10879378	Not Available	609	Open in IMG/M
3300010038\|Ga0126315_10298141	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300010038\|Ga0126315_11166870	Not Available	522	Open in IMG/M
3300010039\|Ga0126309_10012433	All Organisms → cellular organisms → Bacteria	3540	Open in IMG/M
3300010039\|Ga0126309_10790113	Not Available	619	Open in IMG/M
3300010040\|Ga0126308_10066235	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300010040\|Ga0126308_10528014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	800	Open in IMG/M
3300010042\|Ga0126314_10937932	Not Available	641	Open in IMG/M
3300010044\|Ga0126310_10366202	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300010045\|Ga0126311_10417995	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300010146\|Ga0126320_1330518	Not Available	718	Open in IMG/M
3300010371\|Ga0134125_11774786	Not Available	671	Open in IMG/M
3300010371\|Ga0134125_12808616	Not Available	529	Open in IMG/M
3300010373\|Ga0134128_10985055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	932	Open in IMG/M
3300010396\|Ga0134126_11777222	Not Available	676	Open in IMG/M
3300010399\|Ga0134127_13136650	Not Available	540	Open in IMG/M
3300010401\|Ga0134121_10703531	Not Available	959	Open in IMG/M
3300011003\|Ga0138514_100066600	Not Available	749	Open in IMG/M
3300011332\|Ga0126317_10771007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	985	Open in IMG/M
3300012212\|Ga0150985_113207324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	864	Open in IMG/M
3300012469\|Ga0150984_104559991	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300012902\|Ga0157291_10351804	Not Available	529	Open in IMG/M
3300012911\|Ga0157301_10222215	Not Available	648	Open in IMG/M
3300012922\|Ga0137394_10638960	Not Available	898	Open in IMG/M
3300012951\|Ga0164300_10185814	Not Available	1006	Open in IMG/M
3300012960\|Ga0164301_10537056	Not Available	851	Open in IMG/M
3300012961\|Ga0164302_11098410	Not Available	628	Open in IMG/M
3300012986\|Ga0164304_10680107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	779	Open in IMG/M
3300013306\|Ga0163162_12696809	Not Available	572	Open in IMG/M
3300013307\|Ga0157372_11257370	Not Available	855	Open in IMG/M
3300013772\|Ga0120158_10133214	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300014497\|Ga0182008_10689732	Not Available	582	Open in IMG/M
3300015201\|Ga0173478_10285089	Not Available	740	Open in IMG/M
3300018061\|Ga0184619_10254909	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300018465\|Ga0190269_11551853	Not Available	549	Open in IMG/M
3300019356\|Ga0173481_10415511	Not Available	662	Open in IMG/M
3300019361\|Ga0173482_10114035	Not Available	1001	Open in IMG/M
3300020059\|Ga0193745_1033857	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300021078\|Ga0210381_10086150	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300025899\|Ga0207642_10565902	Not Available	703	Open in IMG/M
3300025912\|Ga0207707_10306336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1373	Open in IMG/M
3300025923\|Ga0207681_10776299	Not Available	800	Open in IMG/M
3300025927\|Ga0207687_11120460	Not Available	676	Open in IMG/M
3300025930\|Ga0207701_11575651	Not Available	529	Open in IMG/M
3300025933\|Ga0207706_10711958	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	857	Open in IMG/M
3300025937\|Ga0207669_10616422	Not Available	884	Open in IMG/M
3300025939\|Ga0207665_11182797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. NLS-7	610	Open in IMG/M
3300025944\|Ga0207661_10194088	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300025945\|Ga0207679_10515600	Not Available	1069	Open in IMG/M
3300026118\|Ga0207675_100418230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1323	Open in IMG/M
3300026142\|Ga0207698_11954687	Not Available	601	Open in IMG/M
3300027909\|Ga0209382_10016145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	9120	Open in IMG/M
3300028592\|Ga0247822_10327322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1178	Open in IMG/M
3300028608\|Ga0247819_10195401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1085	Open in IMG/M
3300028718\|Ga0307307_10161259	Not Available	703	Open in IMG/M
3300030989\|Ga0308196_1037965	Not Available	630	Open in IMG/M
3300031058\|Ga0308189_10430497	Not Available	553	Open in IMG/M
3300031421\|Ga0308194_10106006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	815	Open in IMG/M
3300031547\|Ga0310887_10613283	Not Available	668	Open in IMG/M
3300031548\|Ga0307408_100010597	All Organisms → cellular organisms → Bacteria	6080	Open in IMG/M
3300031562\|Ga0310886_10088577	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300031854\|Ga0310904_10073270	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300031858\|Ga0310892_10196025	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031892\|Ga0310893_10177410	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	845	Open in IMG/M
3300031892\|Ga0310893_10595889	Not Available	505	Open in IMG/M
3300031901\|Ga0307406_10483887	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1000	Open in IMG/M
3300031940\|Ga0310901_10159658	Not Available	871	Open in IMG/M
3300031995\|Ga0307409_100508824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1174	Open in IMG/M
3300032005\|Ga0307411_10998610	Not Available	749	Open in IMG/M
3300032012\|Ga0310902_11004190	Not Available	579	Open in IMG/M
3300032126\|Ga0307415_100683935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	924	Open in IMG/M
3300033550\|Ga0247829_10922747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	726	Open in IMG/M
3300034644\|Ga0370548_010607	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300034644\|Ga0370548_052753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	729	Open in IMG/M
3300034644\|Ga0370548_072452	Not Available	654	Open in IMG/M
3300034663\|Ga0314784_136931	Not Available	543	Open in IMG/M
3300034664\|Ga0314786_024976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	988	Open in IMG/M
3300034666\|Ga0314788_015741	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300034667\|Ga0314792_069439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	818	Open in IMG/M
3300034669\|Ga0314794_013672	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300034681\|Ga0370546_044076	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.83%
Host-Associated	Host-Associated	32.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.35%
Plants	Host-Associated → Plants	32.17%
Aquatic	Environmental → Aquatic	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.17%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Sediment	Environmental → Aquatic → Sediment	0.87%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.87%
Roots	Host-Associated → Plants → Roots	0.87%
Phylloplane	Host-Associated → Plants → Phylloplane	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	12.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.35%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.48%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080365

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_102752301	3300001305	Soil	MPIEPLPDVPAPDEDQDDLLPTGPAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
C688J18823_103885262	3300001686	Soil	MPSESLPDTPPPTEGQDELKSSEAAELPLELSEFTQRLASFGLGESPDPLLTDARPSAERRVQN*
C688J35102_1186059851	3300002568	Soil	RTPATPVVPAELSFGSYTRMPIEPLPDVPAPDEDQDDLLPTGPAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
soilL1_1000860112	3300003267	Sugarcane Root And Bulk Soil	MSSEPLPEIPPATESKVDADTSDTADLPGELTEFSQRLASFGLGETPDPLLTDARPPVKRRLSG*
soilL1_100555723	3300003267	Sugarcane Root And Bulk Soil	MPNEPLPDVPPAEGNEQDLKPLTGELPVKLSEFSQRLASFGLGEVPDPLLTEAHPPAKRRAQS*
soilH1_100195414	3300003321	Sugarcane Root And Bulk Soil	MPNEPLPDVPPAEGNEQDLEPLTGELPVKLSEFSQRLASFGLGEVPDPLLTEAHPPAKRRAQS*
Ga0062590_1022507351	3300004157	Soil	MPIEPLPDVPPSDEDPADLEPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0063356_1006117131	3300004463	Arabidopsis Thaliana Rhizosphere	MPSEPLPDVPPAEEGEVKSSEPAERPAELSEFSQRLASFGLGETPDPLLTEARPPSKRRSRT*
Ga0062595_1016468872	3300004479	Soil	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0070676_108454542	3300005328	Miscanthus Rhizosphere	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN*
Ga0070683_1007273371	3300005329	Corn Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPANRRLQN*
Ga0070680_1006253411	3300005336	Corn Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN*
Ga0068868_1007643952	3300005338	Miscanthus Rhizosphere	MPIEPLPDVPPSDQDQDDLPPAEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0070700_1010810211	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0070678_1018593342	3300005456	Miscanthus Rhizosphere	MPIEPLPDVPPSDQDQDDLPPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0070662_1007939192	3300005457	Corn Rhizosphere	PAELSFGSYTRMPIEPPPDIPQSDEGDLEPTEQAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0058697_106185251	3300005562	Agave	MPSEPLPDTPSPAEGQDECTSSDEAELPIDLSEFTQRLASFGLGESPDPLLTDARPPVKRRVQN*
Ga0068854_1001301292	3300005578	Corn Rhizosphere	MPIEPLPDVPPSDQNQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0068852_1026614371	3300005616	Corn Rhizosphere	PPVVPAELSFGSYTRMPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0068862_1019644282	3300005844	Switchgrass Rhizosphere	EAIRRMPSEPLPDTPPADEGDVKSSEPAARPGELSEFSQRLASFGLGETPDPLLTEARPPSKRRSRT*
Ga0081455_100089283	3300005937	Tabebuia Heterophylla Rhizosphere	MPSDALPEVPPDQEGDTKSSNSADPIERSEFSQRLASFGLGEAPDPLLTEARPPTKRRSH
Ga0081455_103082862	3300005937	Tabebuia Heterophylla Rhizosphere	MLSDSLPEVPPDQEGDTKSSDSAEHPIDLSEFSQRLASFGLGEVPDALLTDARPSSKRRSH*
Ga0070716_1017166201	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEPLPDVPPAEKGDAKSSDAAERPAELSEFSQRLASFGLGEAPDPLLTEARPPSKRRSRT*
Ga0068871_1006632012	3300006358	Miscanthus Rhizosphere	MPIEPPPDIPQSDEGDLEPTEQAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0075421_1000174162	3300006845	Populus Rhizosphere	MPSEPLPDVPPAEKGTADAEPLDENGLPVELSEFSQRLASFGLGETPDPLLTDGRPPVKRRTPS*
Ga0075421_1022538771	3300006845	Populus Rhizosphere	MPSEPLPEVPPAEEGTADPEPMEAKDLPVERSEFSQRLASFGLGETPDPLLTDGRPPVKRRTPS*
Ga0068865_1009748512	3300006881	Miscanthus Rhizosphere	MPIEPLPDVPPSDQDQDDLPPAEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN*
Ga0111539_104619651	3300009094	Populus Rhizosphere	MPIEPLPDVPPSDEDQGDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0111538_101921253	3300009156	Populus Rhizosphere	MPIEPLPDVPPSDEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0105241_112859121	3300009174	Corn Rhizosphere	MPIEPLPDVPPSDDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0126307_102348422	3300009789	Serpentine Soil	MPIEPLPDVPPTDEGQDDLKPPDQAELPVDLSHFSQRLASFGLGESPDPLLTEARPPAKRRVQSE*
Ga0126313_100976422	3300009840	Serpentine Soil	MPIEPLPDVPPTDEGQDDPKPSDQAELPVDLSHFSQRLASFGLGESPDPLLTEARPAAKRRVQSE*
Ga0126313_107145082	3300009840	Serpentine Soil	MPSEPLPDTPPPTEGRDELKSSEEAELPVELSEFTQRLASFGLGESPDPLLTDARPLVKRRLQD*
Ga0126304_101741262	3300010037	Serpentine Soil	MPIEPLPDVPPTDQGQDDLKPSDQAELPVDLSQFSQRLASFGLGESPDPLLTEARSPNKRRVQSE*
Ga0126304_108793782	3300010037	Serpentine Soil	PDVPPTDEGQDDLKPSDQAELPVDLSHFSQRLASFGLGESPDPLLTEARPPAKRRVQSE*
Ga0126315_102981411	3300010038	Serpentine Soil	MPSEPLPDSPPIDEGRESKSSDAAELPVELSEFSQRLASFGLGETQDPLLTDARPPAKRR
Ga0126315_111668702	3300010038	Serpentine Soil	MPSEPLPDTPPTIEGQVELKSSEKAELPVELSEFTQRLASFGLGESPDPLLTDARPPVKRRLQD*
Ga0126309_100124333	3300010039	Serpentine Soil	MPSEPLPDTPPPIEGQEELKSSEDAGLPVELSEFTQRLASFGLGESPDPLLTDARPPVKRRVQD*
Ga0126309_107901132	3300010039	Serpentine Soil	AELSFGSYTRMASEPLPGPPAHEDQDELKLPEGAELPGELSEFTQRLASFGLGESPDPLLTDARPPVKRRVQD*
Ga0126308_100662353	3300010040	Serpentine Soil	MPIEPLPDIPPVKENQGDLKPAEGAELPVELSEFSQRLASFGLGETPDSLLTDTRPPAKRRMPT*
Ga0126308_105280141	3300010040	Serpentine Soil	RMPSEPLPDTPPTIEGQVELKSSEKAELPVELSEFTQRLASFGLGESPDPLLTDARPPVKRRLQD*
Ga0126314_109379321	3300010042	Serpentine Soil	MPSEPLPDSPPIDEGRESKSSDAAELPVELSEFSQRLASFGLGETQDPLLTDARPPAKRRMQK*
Ga0126310_103662021	3300010044	Serpentine Soil	MPIEPLPDVQPTDEGQDDLKPSDQAELPVDLSHFSQRLASFGLGESPDPLLTEARPAAKRRVQSE*
Ga0126311_104179952	3300010045	Serpentine Soil	MPSEPLPDTPPTIDGQEELKSSEEAELPVELSEFTQRLASFGLGESPDPLLTDARPPVKRRVQN*
Ga0126320_13305181	3300010146	Soil	AELSFGSYTRMPIEPLPDVPQSDEDNLEPTEQAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0134125_117747862	3300010371	Terrestrial Soil	MSIEPLPDVPPSDEDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0134125_128086161	3300010371	Terrestrial Soil	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEASPPAKRRLPN*
Ga0134128_109850552	3300010373	Terrestrial Soil	PPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0134126_117772221	3300010396	Terrestrial Soil	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0134127_131366502	3300010399	Terrestrial Soil	DVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0134121_107035311	3300010401	Terrestrial Soil	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLLN*
Ga0138514_1000666001	3300011003	Soil	MPSERLPDTARLDEAVSDPNASEPAGLPVELSEFSQRLASFGLGEAPDPLLTEARPPKKRRSRA*
Ga0126317_107710072	3300011332	Soil	ELSFGSYTRMPIEPLPDVPPSEEDQDDLEPAEQAELPVDLSHFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0150985_1132073242	3300012212	Avena Fatua Rhizosphere	FGSYTRMPSESLPDAPPPTEGQDELKSSEAAELPLELSEFTQRLASFGLGESPDPLLTDARPSAERRVQN*
Ga0150984_1045599913	3300012469	Avena Fatua Rhizosphere	PNFFFGSYTRMPSESLPDAPPPTEGQDELKSSEAAELPLELSEFTQRLASFGLGESPDPLLTDARPSAERRVQN*
Ga0157291_103518041	3300012902	Soil	MPIEPLPDVPPSVQDQDDLPPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0157301_102222152	3300012911	Soil	VPAELSFGSYTRMPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0137394_106389601	3300012922	Vadose Zone Soil	MPSEPLPDVPPAEKGDVKSSDPAERPAELSEFSQRLASFGLGEAPDPLLTEARPPSKRRSRP*
Ga0164300_101858142	3300012951	Soil	MPIEPLPDVPPSEEQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0164301_105370561	3300012960	Soil	MSIEPLPDVPPSDEDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0164302_110984101	3300012961	Soil	MSIEPLPDVPPSDEDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPP
Ga0164304_106801072	3300012986	Soil	MSIEPLPDVPPSDEDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLEN*
Ga0163162_126968092	3300013306	Switchgrass Rhizosphere	YTRMPIEPLPDVPPSDQDQDDLPPAEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0157372_112573702	3300013307	Corn Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN*
Ga0120158_101332142	3300013772	Permafrost	MPSEPLPDTSPLHEGVNDPSASDASELPVELSEFSQRLASFGLGETPDPLLTEARRPKKRRS*
Ga0182008_106897322	3300014497	Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVNLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0173478_102850891	3300015201	Soil	MPIEPLPDVPPSDEDPADLEPTEHAELPVDLSQFSQRLASFGLGESPDPLLTDARPPAKRRLQN*
Ga0184619_102549092	3300018061	Groundwater Sediment	MPSEPLPDVPPPEEGDVKPSDAAELPIELSEFSQRLASFGLGEAPDPLLTEARPPSKR
Ga0190269_115518531	3300018465	Soil	MPSEPQPEVPPAEEGQDTASPSDQPELPVDLSEFTQRLASFGLGETPDPLLTDARPPAKRRL
Ga0173481_104155111	3300019356	Soil	PPVVPAELSFGSYTRMPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN
Ga0173482_101140351	3300019361	Soil	MPIEPLPDVPPSDQDQDDLPPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0193745_10338572	3300020059	Soil	MPSEPLPDTSRLDEAVSDPNASEPAGLPVELSEFSQRLASFGLGEAPDPL
Ga0210381_100861502	3300021078	Groundwater Sediment	MPTEPLPDVPPADQDQDDLKPSEQAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN
Ga0207642_105659021	3300025899	Miscanthus Rhizosphere	LPDVPPSDQDQDDLPPAEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN
Ga0207707_103063362	3300025912	Corn Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0207681_107762992	3300025923	Switchgrass Rhizosphere	MPIEPLPDVPPSEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTDARPPAKRRLQN
Ga0207687_111204602	3300025927	Miscanthus Rhizosphere	PDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0207701_115756512	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN
Ga0207706_107119581	3300025933	Corn Rhizosphere	LCFSAPSLKRTAATPVIPAELSFGSYTRMPIEPPPDIPQSDEGDLEPTEQAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0207669_106164222	3300025937	Miscanthus Rhizosphere	MPIEPLPDVPPSDQDQDDLPPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN
Ga0207665_111827971	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEPLPDVPPAEKGDAKSSDAAERPAELSEFSQRLASFGLGEAPDPLLTEARPPSKRRSRT
Ga0207661_101940883	3300025944	Corn Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0207679_105156002	3300025945	Corn Rhizosphere	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN
Ga0207675_1004182302	3300026118	Switchgrass Rhizosphere	MPIEPLPDVPPSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLHN
Ga0207698_119546872	3300026142	Corn Rhizosphere	PSDQDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTDARPPAKRRLQN
Ga0209382_100161452	3300027909	Populus Rhizosphere	MPSEPLPDVPPAEKGTADAEPLDENGLPVELSEFSQRLASFGLGETPDPLLTDGRPPVKRRTPS
Ga0247822_103273221	3300028592	Soil	MPIEPLPDVPPSEEQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0247819_101954011	3300028608	Soil	MPIEPLPDVPPSDEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0307307_101612592	3300028718	Soil	MPSEPLPDTSRLDEAVNDPNASDPAGLPVELSEFSQRLASFGLGEAPDPLLTEARPPKKRRSRT
Ga0308196_10379652	3300030989	Soil	MPSEPLPDTSRLDEAVNDPNASDPAGLPVELSEFSQRLASFGLGEAPDPLLTEARPAKKRRSRT
Ga0308189_104304972	3300031058	Soil	RTSFGSYTRMPSEQPPDVPSTDEGSDDTKPSDGTELPGELSEFSQRLASFGLGETPDPLLTDVRPPAKRRLQA
Ga0308194_101060061	3300031421	Soil	ELSFGSYTRMPSEPLPDDPPAHEDQDELKLPEGAELPGELSEFTQRLASFGLGESPDPLLTDARPPVKRRVQD
Ga0310887_106132831	3300031547	Soil	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0307408_1000105976	3300031548	Rhizosphere	MPSEPLPDLPSTQDEAELETSEGAELPVDLSEFTQRLASFGLGESPDPLLTDARPPAKRRMQD
Ga0310886_100885773	3300031562	Soil	MPIEPLPDVPPSDEDQGDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0310904_100732701	3300031854	Soil	MPIEPLPDVPPSDDQGDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0310892_101960251	3300031858	Soil	YTRMPIEPLPDVPPSEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0310893_101774102	3300031892	Soil	DVPPSEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0310893_105958891	3300031892	Soil	MPIEPLPDVPPSDEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEA
Ga0307406_104838872	3300031901	Rhizosphere	MPSEPLPDLPSTQDEAELETSEGAELPVHLSEFTQRLASFGLGESPDPLLTDARPPAKRRMQD
Ga0310901_101596582	3300031940	Soil	MPIEPLPDVPPSDVDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLPN
Ga0307409_1005088242	3300031995	Rhizosphere	MPIEPLPDVPPTDEGQDDPKPSDQAELPVDLSHFSQRLASFGLGESPDPLLTEARPAAKRRVQSE
Ga0307411_109986101	3300032005	Rhizosphere	MPSEPQPDAAPAEEGQGSASHPDSAEQLPGELSEFSQRLASFGLGESPDPLLTEARPPAKRRMPI
Ga0310902_110041901	3300032012	Soil	MPIEPLPDVPPSEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0307415_1006839352	3300032126	Rhizosphere	MPSEPLSDVPPADEGQDDLKTSEGAELPVELSEFSQRLASFGLGEAPDPLLTDTRPPAKRRVQN
Ga0247829_109227472	3300033550	Soil	PDVPPSEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0370548_010607_1024_1251	3300034644	Soil	PAELSFGSYTRMPSEPLPDDPPAHEDQDELKLPEGAELPGELSEFTQRLASFGLGESPDPLLTDARPPVKRRVQD
Ga0370548_052753_515_709	3300034644	Soil	MPSEPLPDTSRLDEAVNDLNASDPAGLPVELSEFSQRLASFGLGEAPDPLLTEARPPKKRRSRT
Ga0370548_072452_3_197	3300034644	Soil	RMPSEPLPDIPRPPEEGEVKPSDVAELPIELSEFSQRLASFGLGEAPDPLLTEARPPSKRRSRT
Ga0314784_136931_1_225	3300034663	Soil	AELSFGSYTRMPIEPLPDVPPSDEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0314786_024976_773_988	3300034664	Soil	LSFGSYTRMPIEPLPDVPPSDDQGDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLPN
Ga0314788_015741_989_1201	3300034666	Soil	SFGSYTRMPIEPLPDVPPSEDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN
Ga0314792_069439_1_222	3300034667	Soil	AELSFGSYTRMPIEPLPDVPPSDDQDDLQPTEHAELPVDLSEFSQRLASFGLGESPDPLLTEARPPAKRRLPN
Ga0314794_013672_990_1211	3300034669	Soil	ELSFGSYTRMPIEPLPDVPPSDEDQDDLQPTEHAELPVDLSQFSQRLASFGLGESPDPLLTEARPPAKRRLQN
Ga0370546_044076_1_225	3300034681	Soil	AELSFGSYTRMPSEPLPDDPPAHEDQDELKLPEGAELPGELSEFTQRLASFGLGESPDPLLTDARPPVKRRVQD

Hidden Markov Model


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