NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080353

Metagenome / Metatranscriptome Family F080353

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080353
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 39 residues
Representative Sequence ELDLDGEMAACARLVAARARPAPAVLADDRTDLWSLVRR
Number of Associated Samples 102
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.87 %
% of genes near scaffold ends (potentially truncated) 99.13 %
% of genes from short scaffolds (< 2000 bps) 93.91 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.261 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(29.565 % of family members)
Environment Ontology (ENVO) Unclassified
(27.826 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.087 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.30%    β-sheet: 0.00%    Coil/Unstructured: 59.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00106adh_short 78.26
PF13439Glyco_transf_4 4.35
PF01810LysE 2.61
PF01242PTPS 1.74
PF00534Glycos_transf_1 1.74
PF03176MMPL 1.74
PF13551HTH_29 0.87
PF13459Fer4_15 0.87
PF08659KR 0.87
PF13565HTH_32 0.87
PF00456Transketolase_N 0.87
PF01227GTP_cyclohydroI 0.87
PF14759Reductase_C 0.87
PF00440TetR_N 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG07206-pyruvoyl-tetrahydropterin synthaseCoenzyme transport and metabolism [H] 1.74
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 1.74
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 1.74
COG0021TransketolaseCarbohydrate transport and metabolism [G] 0.87
COG3959Transketolase, N-terminal subunitCarbohydrate transport and metabolism [G] 0.87

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.26 %
UnclassifiedrootN/A1.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001867|JGI12627J18819_10238071All Organisms → cellular organisms → Bacteria → Terrabacteria group732Open in IMG/M
3300004635|Ga0062388_102003631All Organisms → cellular organisms → Bacteria → Terrabacteria group599Open in IMG/M
3300005332|Ga0066388_105885223All Organisms → cellular organisms → Bacteria → Terrabacteria group620Open in IMG/M
3300005459|Ga0068867_100981090All Organisms → cellular organisms → Bacteria → Terrabacteria group765Open in IMG/M
3300005471|Ga0070698_101552433All Organisms → cellular organisms → Bacteria → Terrabacteria group614Open in IMG/M
3300005554|Ga0066661_10545611All Organisms → cellular organisms → Bacteria → Terrabacteria group695Open in IMG/M
3300005558|Ga0066698_10878453All Organisms → cellular organisms → Bacteria → Terrabacteria group575Open in IMG/M
3300005591|Ga0070761_11084585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia509Open in IMG/M
3300005764|Ga0066903_102005091All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300005764|Ga0066903_103019504All Organisms → cellular organisms → Bacteria → Terrabacteria group911Open in IMG/M
3300005764|Ga0066903_103806014All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300005841|Ga0068863_101578550All Organisms → cellular organisms → Bacteria → Terrabacteria group665Open in IMG/M
3300005844|Ga0068862_102526526All Organisms → cellular organisms → Bacteria → Terrabacteria group525Open in IMG/M
3300006028|Ga0070717_10795555All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300006052|Ga0075029_100945242All Organisms → cellular organisms → Bacteria → Terrabacteria group593Open in IMG/M
3300006059|Ga0075017_100342667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer1111Open in IMG/M
3300006174|Ga0075014_100235413All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300006175|Ga0070712_100856569All Organisms → cellular organisms → Bacteria → Terrabacteria group782Open in IMG/M
3300006791|Ga0066653_10690422All Organisms → cellular organisms → Bacteria → Terrabacteria group526Open in IMG/M
3300006904|Ga0075424_102517253All Organisms → cellular organisms → Bacteria → Terrabacteria group539Open in IMG/M
3300009089|Ga0099828_10050143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3462Open in IMG/M
3300009521|Ga0116222_1216748All Organisms → cellular organisms → Bacteria → Terrabacteria group825Open in IMG/M
3300009545|Ga0105237_11422292All Organisms → cellular organisms → Bacteria → Terrabacteria group700Open in IMG/M
3300009824|Ga0116219_10081925All Organisms → cellular organisms → Bacteria1889Open in IMG/M
3300010046|Ga0126384_12313696All Organisms → cellular organisms → Bacteria → Terrabacteria group519Open in IMG/M
3300010048|Ga0126373_12407806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia586Open in IMG/M
3300010048|Ga0126373_12519450All Organisms → cellular organisms → Bacteria → Terrabacteria group573Open in IMG/M
3300010341|Ga0074045_10253830All Organisms → cellular organisms → Bacteria → Terrabacteria group1162Open in IMG/M
3300010358|Ga0126370_11070901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum → Ferrimicrobium acidiphilum DSM 19497741Open in IMG/M
3300010358|Ga0126370_11243802All Organisms → cellular organisms → Bacteria → Terrabacteria group695Open in IMG/M
3300010360|Ga0126372_11800004All Organisms → cellular organisms → Bacteria → Terrabacteria group656Open in IMG/M
3300010376|Ga0126381_103153351All Organisms → cellular organisms → Bacteria → Terrabacteria group652Open in IMG/M
3300010376|Ga0126381_104821989All Organisms → cellular organisms → Bacteria → Terrabacteria group518Open in IMG/M
3300010396|Ga0134126_11726956All Organisms → cellular organisms → Bacteria → Terrabacteria group687Open in IMG/M
3300010400|Ga0134122_13154355All Organisms → cellular organisms → Bacteria → Terrabacteria group516Open in IMG/M
3300011119|Ga0105246_11558942All Organisms → cellular organisms → Bacteria → Terrabacteria group623Open in IMG/M
3300011271|Ga0137393_10127041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2109Open in IMG/M
3300011271|Ga0137393_10393511All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300012198|Ga0137364_10864390All Organisms → cellular organisms → Bacteria → Terrabacteria group684Open in IMG/M
3300012208|Ga0137376_10806164All Organisms → cellular organisms → Bacteria → Terrabacteria group808Open in IMG/M
3300012356|Ga0137371_10298603All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300012356|Ga0137371_11443544All Organisms → cellular organisms → Bacteria → Terrabacteria group503Open in IMG/M
3300012359|Ga0137385_11105521All Organisms → cellular organisms → Bacteria → Terrabacteria group652Open in IMG/M
3300012361|Ga0137360_11805762All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300012912|Ga0157306_10484683All Organisms → cellular organisms → Bacteria → Terrabacteria group504Open in IMG/M
3300012923|Ga0137359_11262352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria627Open in IMG/M
3300012957|Ga0164303_11418931All Organisms → cellular organisms → Bacteria → Terrabacteria group520Open in IMG/M
3300012989|Ga0164305_11382122All Organisms → cellular organisms → Bacteria → Terrabacteria group619Open in IMG/M
3300015374|Ga0132255_102934285All Organisms → cellular organisms → Bacteria → Terrabacteria group729Open in IMG/M
3300016270|Ga0182036_10921085All Organisms → cellular organisms → Bacteria → Terrabacteria group717Open in IMG/M
3300016270|Ga0182036_11444491All Organisms → cellular organisms → Bacteria → Terrabacteria group576Open in IMG/M
3300017972|Ga0187781_10647932All Organisms → cellular organisms → Bacteria → Terrabacteria group762Open in IMG/M
3300018060|Ga0187765_10268879All Organisms → cellular organisms → Bacteria → Terrabacteria group1011Open in IMG/M
3300018085|Ga0187772_10574066All Organisms → cellular organisms → Bacteria → Terrabacteria group801Open in IMG/M
3300020581|Ga0210399_11341913All Organisms → cellular organisms → Bacteria → Terrabacteria group561Open in IMG/M
3300021170|Ga0210400_10648055All Organisms → cellular organisms → Bacteria → Terrabacteria group870Open in IMG/M
3300021180|Ga0210396_10711728All Organisms → cellular organisms → Bacteria → Terrabacteria group867Open in IMG/M
3300021377|Ga0213874_10211104All Organisms → cellular organisms → Bacteria → Terrabacteria group702Open in IMG/M
3300021403|Ga0210397_10441750All Organisms → cellular organisms → Bacteria → Terrabacteria group978Open in IMG/M
3300021405|Ga0210387_11354883All Organisms → cellular organisms → Bacteria → Terrabacteria group613Open in IMG/M
3300021432|Ga0210384_11839721All Organisms → cellular organisms → Bacteria → Terrabacteria group511Open in IMG/M
3300021445|Ga0182009_10349772All Organisms → cellular organisms → Bacteria → Terrabacteria group755Open in IMG/M
3300021560|Ga0126371_13444046All Organisms → cellular organisms → Bacteria → Terrabacteria group534Open in IMG/M
3300022724|Ga0242665_10243746All Organisms → cellular organisms → Bacteria → Terrabacteria group609Open in IMG/M
3300025625|Ga0208219_1058371All Organisms → cellular organisms → Bacteria → Terrabacteria group939Open in IMG/M
3300025915|Ga0207693_10335988All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300025922|Ga0207646_10620572All Organisms → cellular organisms → Bacteria → Terrabacteria group970Open in IMG/M
3300025931|Ga0207644_10722313All Organisms → cellular organisms → Bacteria → Terrabacteria group831Open in IMG/M
3300025941|Ga0207711_10832399All Organisms → cellular organisms → Bacteria → Terrabacteria group859Open in IMG/M
3300026306|Ga0209468_1191120All Organisms → cellular organisms → Bacteria → Terrabacteria group518Open in IMG/M
3300026356|Ga0257150_1053482All Organisms → cellular organisms → Bacteria → Terrabacteria group600Open in IMG/M
3300027173|Ga0208097_1008390All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli1105Open in IMG/M
3300027795|Ga0209139_10275745All Organisms → cellular organisms → Bacteria → Terrabacteria group593Open in IMG/M
3300027817|Ga0209112_10324689All Organisms → cellular organisms → Bacteria → Terrabacteria group546Open in IMG/M
3300027875|Ga0209283_10367811All Organisms → cellular organisms → Bacteria → Terrabacteria group941Open in IMG/M
3300028379|Ga0268266_10041840All Organisms → cellular organisms → Bacteria3912Open in IMG/M
3300028784|Ga0307282_10498423All Organisms → cellular organisms → Bacteria → Terrabacteria group591Open in IMG/M
3300028906|Ga0308309_10052551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii2947Open in IMG/M
3300028906|Ga0308309_11340381All Organisms → cellular organisms → Bacteria → Terrabacteria group615Open in IMG/M
3300030706|Ga0310039_10216878All Organisms → cellular organisms → Bacteria → Terrabacteria group748Open in IMG/M
3300031543|Ga0318516_10502898All Organisms → cellular organisms → Bacteria → Terrabacteria group695Open in IMG/M
3300031546|Ga0318538_10471991All Organisms → cellular organisms → Bacteria → Terrabacteria group680Open in IMG/M
3300031549|Ga0318571_10150933Not Available803Open in IMG/M
3300031572|Ga0318515_10363200All Organisms → cellular organisms → Bacteria → Terrabacteria group776Open in IMG/M
3300031640|Ga0318555_10766653All Organisms → cellular organisms → Bacteria → Terrabacteria group521Open in IMG/M
3300031679|Ga0318561_10495826All Organisms → cellular organisms → Bacteria → Terrabacteria group672Open in IMG/M
3300031719|Ga0306917_10417142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Ea1.121049Open in IMG/M
3300031751|Ga0318494_10176626All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300031779|Ga0318566_10083312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria1557Open in IMG/M
3300031781|Ga0318547_11019672All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300031782|Ga0318552_10051905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria1945Open in IMG/M
3300031792|Ga0318529_10116789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinoalloteichus1213Open in IMG/M
3300031793|Ga0318548_10504741All Organisms → cellular organisms → Bacteria → Terrabacteria group591Open in IMG/M
3300031796|Ga0318576_10476749All Organisms → cellular organisms → Bacteria → Terrabacteria group589Open in IMG/M
3300031797|Ga0318550_10627706All Organisms → cellular organisms → Bacteria → Terrabacteria group516Open in IMG/M
3300031805|Ga0318497_10316084All Organisms → cellular organisms → Bacteria → Terrabacteria group871Open in IMG/M
3300031890|Ga0306925_10244205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria1935Open in IMG/M
3300031897|Ga0318520_10097877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria1642Open in IMG/M
3300031897|Ga0318520_10520760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia735Open in IMG/M
3300032009|Ga0318563_10583264All Organisms → cellular organisms → Bacteria → Terrabacteria group603Open in IMG/M
3300032035|Ga0310911_10194941All Organisms → cellular organisms → Bacteria1151Open in IMG/M
3300032039|Ga0318559_10512662All Organisms → cellular organisms → Bacteria → Terrabacteria group559Open in IMG/M
3300032052|Ga0318506_10445997All Organisms → cellular organisms → Bacteria → Terrabacteria group574Open in IMG/M
3300032063|Ga0318504_10024203All Organisms → cellular organisms → Bacteria → Terrabacteria group2341Open in IMG/M
3300032063|Ga0318504_10056299All Organisms → cellular organisms → Bacteria1668Open in IMG/M
3300032068|Ga0318553_10399462All Organisms → cellular organisms → Bacteria → Terrabacteria group720Open in IMG/M
3300032076|Ga0306924_10088480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3483Open in IMG/M
3300032089|Ga0318525_10022257All Organisms → cellular organisms → Bacteria3020Open in IMG/M
3300032261|Ga0306920_103522891Not Available578Open in IMG/M
3300032897|Ga0335071_11311411All Organisms → cellular organisms → Bacteria → Terrabacteria group669Open in IMG/M
3300032898|Ga0335072_11023182All Organisms → cellular organisms → Bacteria → Terrabacteria group755Open in IMG/M
3300032898|Ga0335072_11314906All Organisms → cellular organisms → Bacteria → Terrabacteria group632Open in IMG/M
3300033134|Ga0335073_10306770All Organisms → cellular organisms → Bacteria1902Open in IMG/M
3300033134|Ga0335073_10852692All Organisms → cellular organisms → Bacteria → Terrabacteria group968Open in IMG/M
3300033289|Ga0310914_10694974All Organisms → cellular organisms → Bacteria → Terrabacteria group913Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil29.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.35%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.48%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.61%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.61%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.87%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.87%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.87%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300027173Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027817Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1023807123300001867Forest SoilELDLDGEMAACARLVAARARPAPAVLADDRADLWSLA*
Ga0062388_10200363123300004635Bog Forest SoilDPELDLDGEMAACGRLVSERAQPAPAVLADDRTDLWSLARR*
Ga0066388_10588522313300005332Tropical Forest SoilELDLDGEMAACARLVSARARAAPGVLANERTDLWSLALKAGS*
Ga0068867_10098109023300005459Miscanthus RhizosphereGDPELDHDSEMAACVRLVAARARPARGVLADEHTDLWSLA*
Ga0070698_10155243323300005471Corn, Switchgrass And Miscanthus RhizosphereLHGEMAACARMVAARARPAPAVLADDRTDLWSLAGGEASS*
Ga0066661_1054561123300005554SoilDLDGEMAAAARLVSTRARPSPAVLADDQTDLWSLTS*
Ga0066698_1087845323300005558SoilLDGEMAACARLVSARARPAPAVLADDRTDLWSLS*
Ga0070761_1108458523300005591SoilDGEMAACARLVSARARPAPAVLADDRTDLWSLARG*
Ga0066903_10200509133300005764Tropical Forest SoilDSEMAACARLVSARARPDPAALADERTDLRSLAVP*
Ga0066903_10301950423300005764Tropical Forest SoilDSEMAACARLVSARARLDPQTLGDERASLWSLGGADTPP*
Ga0066903_10380601423300005764Tropical Forest SoilGDPEFDTDGEMAACARLVGESAHPEPARLADDAVDLWSLLGD*
Ga0068863_10157855013300005841Switchgrass RhizosphereELDADGEMAACAQLVGRRARPASAALADEAVDLWSLAG*
Ga0068862_10252652613300005844Switchgrass RhizosphereGDPELDLDSEMAACARLVSAQARLAPAVLADDRTDLWSLVRP*
Ga0070717_1079555523300006028Corn, Switchgrass And Miscanthus RhizosphereELDVDGEMAACARLVSARSRPDPAVLADERTDLWSLAAG*
Ga0075029_10094524213300006052WatershedsELDTDGEMAACGRLVSMQARPTPAVLSDEKTDLWSLARP*
Ga0075017_10034266713300006059WatershedsPELDTDSEMAACARLVAARARPAPGQLADERVDLWSLVR*
Ga0075014_10023541313300006174WatershedsDGEMAACARLVAVQARPAPGVLADEHTDLWSLAVQ*
Ga0070712_10085656913300006175Corn, Switchgrass And Miscanthus RhizosphereDGEMAACARLVSARVRAAPGVLADDRTDLWSLAPKPGS*
Ga0066653_1069042223300006791SoilGDPEQDTDQEMAACARLVAKQARPAGGQLADERVDLWSLAG*
Ga0075424_10251725323300006904Populus RhizosphereDGEMAACARLVSVQARPAPAVLADDRTDLWSLARAGASP*
Ga0099828_1005014313300009089Vadose Zone SoilDPELDLDGEMAACARLVAVRACPAPGVLSDERTDLWSLGQG*
Ga0116222_121674813300009521Peatlands SoilLDGEMAACARLVAARARSAPATLSDDHTDLWSLAGAKASDS*
Ga0105237_1142229223300009545Corn RhizosphereLGGEMAACVRLVSARARVAPGVLADDRADLWSLALKPGS*
Ga0116219_1008192533300009824Peatlands SoilDGEMAACARLVSEQARPAPGVLADDRTDLWSLARR*
Ga0126384_1231369623300010046Tropical Forest SoilGDPELDRDSEMAACVRLVAARARPARGVLADEHTDLWSLA*
Ga0126373_1240780623300010048Tropical Forest SoilPELDQDSEMAACARLVARRAKPARGVLSDEQADLWSLGS*
Ga0126373_1251945013300010048Tropical Forest SoilDPELDLDGEMAACARLVSARARAAPGVLADDRTDLWSLALKAGS*
Ga0074045_1025383033300010341Bog Forest SoilDGEMAACARLVAVRARPAPGVLADEHTDLWSLAPSS*
Ga0126370_1107090113300010358Tropical Forest SoilDGEMAACARLVASRARPTAARLADDRADLWSLIGQHGEG*
Ga0126370_1124380223300010358Tropical Forest SoilDPELDLDGEMAACARLVAAQARPAADVLADDRSDLWSLAQR*
Ga0126372_1180000423300010360Tropical Forest SoilGEMAACARLVAARARPAANVLADDRRDLWSLAQR*
Ga0126381_10315335123300010376Tropical Forest SoilGEMAACARLVSVQARPAPAVLSDERTDLWSLAGSGAPS*
Ga0126381_10482198913300010376Tropical Forest SoilDPELDLDGEMAACARLVAARARPAADVLADDRSDLWSLA*
Ga0134126_1172695623300010396Terrestrial SoilDSEMAACARLVAERARAAPAVLADDRTDLWSLADAEAPS*
Ga0134122_1315435523300010400Terrestrial SoilGDPELDEDSEMAACARLVGAQARPEAAQLADEGVDLWSLPA*
Ga0105246_1155894223300011119Miscanthus RhizosphereEDGEMAACARMVAQRATPTAAQLVDENTDLWSLVER*
Ga0137393_1012704123300011271Vadose Zone SoilELDLDGEMAACARLVARRARPARRMLADEQADLWSLC*
Ga0137393_1039351133300011271Vadose Zone SoilDLDSEMAACARLVAQRIRPAPGRLADERVDLWSLAT*
Ga0137364_1086439013300012198Vadose Zone SoilSEMAACTRLVAARARPARGVLADEHADLWSLVTH*
Ga0137376_1080616423300012208Vadose Zone SoilMAACTRLVAARARPARGVLADEHADLWSLANDGRA*
Ga0137371_1029860313300012356Vadose Zone SoilLDLDGEMAACARLVSARARPAPAVLADDRTDLWSLS*
Ga0137371_1144354423300012356Vadose Zone SoilGEMAACARLVSARARPAPAVLADDRTDLWSLADAEASS*
Ga0137385_1110552123300012359Vadose Zone SoilDLDGEMAACAPLVAARARTAPAVLADDRTDLWSLARR*
Ga0137360_1180576223300012361Vadose Zone SoilDLGGEMAACACLVAARARPAPAVLADDRTDLWSLTGR*
Ga0157306_1048468313300012912SoilTDGEMAACARLVASRARPDTGQLADEDVDLWSLAQ*
Ga0137359_1126235213300012923Vadose Zone SoilPELDADQEMAACARLVAARARPAGAQLADERVDLWSLAG*
Ga0164303_1141893123300012957SoilDPEADPDSEMAACARLVAMQARPAGDQLADEGVDLWSLGQ*
Ga0164305_1138212213300012989SoilTDGEMAACAQLVGRRARPASAALADEAVDLWSLAG*
Ga0132255_10293428513300015374Arabidopsis RhizosphereDEDGEMAACARLVAQQAAPAPARLADDDVDLWSLVR*
Ga0182036_1092108513300016270SoilDSEMAACARLVSARARPAPAVLADERTDLWSLSRR
Ga0182036_1144449113300016270SoilPELDLDDEMAACVHLVSARARPAPAVLADDRTDLWALGRR
Ga0187781_1064793213300017972Tropical PeatlandDPELDLDGEMAAAARLVAARARPAPALLADDRTDLWSL
Ga0187765_1026887913300018060Tropical PeatlandELDLDGEMAACARLVAARARPAPAVLADDRTDLWSLVRR
Ga0187772_1057406623300018085Tropical PeatlandDLDGEMAACARLVSARARPAPAVLADDRTDLAGLGG
Ga0210399_1134191323300020581SoilDGEMAACARLVAARARPAAAVLADDRTDLRSLGQT
Ga0210400_1064805513300021170SoilDGEMAACARLVSARARPDPTVLADDSTDLWSLLAG
Ga0210396_1071172813300021180SoilGGDPELDLDGEMAAAARLVSTRARPSPAVLADDRTDLWSLTS
Ga0213874_1021110423300021377Plant RootsLDLDGEMAACARLISEQAGPARAVLADEHTDLWSLGRS
Ga0210397_1044175013300021403SoilPELDLDGEMAAAGRLVAGRARPARDRLADEQTDLWSLPASA
Ga0210387_1135488323300021405SoilLDGEMAACGRLVSEQARPAPAVLADDRTDLWSLARR
Ga0210384_1183972113300021432SoilELDLDGEMAACASLVSARARPAPAALASDRTDLWSLAQP
Ga0182009_1034977223300021445SoilPELDHDSEMAACTRLVAARARPAHGVLADEHTDLWSLA
Ga0126371_1344404613300021560Tropical Forest SoilVDKDGEMAACARLVAARAKPTPAMLADDSIDLWDLGGR
Ga0242665_1024374613300022724SoilGDPELDLDGEMAAAARLVSTQARPSPAVLADDRTDLWSLTS
Ga0208219_105837123300025625Arctic Peat SoilKLDRDSEMAASARLVAGRARPARGVLADERTNLWSLPVTG
Ga0207693_1033598833300025915Corn, Switchgrass And Miscanthus RhizosphereDGEMAACARLVSARVRAAPGVLADDRTDLWSLAPKPGS
Ga0207646_1062057213300025922Corn, Switchgrass And Miscanthus RhizosphereDPELDRDSEMAACARLVAVRARPARGLLADEHADLWSLAYGA
Ga0207644_1072231313300025931Switchgrass RhizosphereGDPELDADGEMAACAQLVGRRARPAPAALADEAVDLWSLAG
Ga0207711_1083239923300025941Switchgrass RhizosphereLDLDSEMAACARLVSAQARLAPAVLADDRTDLWSLVRP
Ga0209468_119112023300026306SoilQDTDQEMAACARLVAKQARPAGGQLADERVDLWSLAG
Ga0257150_105348223300026356SoilGGDPELDLDGEMAACGRLVSERARPAPAVLADDRTDLWSLARR
Ga0208097_100839043300027173Forest SoilDPELDLDGEMAACARLVAVSARPAPGVLADEHTDLWSLSTTG
Ga0209139_1027574523300027795Bog Forest SoilDPEADSDSEMAACAKLVAIRAHPPASQLADDSVDLWSLAV
Ga0209112_1032468913300027817Forest SoilDLDGEMAACARLVAAQARPAPAVLADERTDLWSLGQR
Ga0209283_1036781113300027875Vadose Zone SoilDPELDLDGEMAACARLVAVRACPAPGVLSDERTDLWSLGQG
Ga0268266_1004184013300028379Switchgrass RhizosphereDLDSEMAACARLVSAQARLAPAVLADDRTDLWSLVRP
Ga0307282_1049842323300028784SoilELDRESEMAACAHLVAARARPARGVLADEHTDLWSLA
Ga0308309_1005255143300028906SoilGDPELDLDGEMAACSRLVAARAHPAPAVLADERTDLWSLTRG
Ga0308309_1134038113300028906SoilDPELDLDGEMAACSRLVAARARPAPAVLADERTDLWSLTRENNGS
Ga0310039_1021687813300030706Peatlands SoilDGEMAACARLVSEQARPAPGVLADDRTDLWSLARR
Ga0318516_1050289823300031543SoilLDLDGEMAACACLVSARARVAPGVLADDGTDLWSLARR
Ga0318538_1047199113300031546SoilAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0318571_1015093313300031549SoilGDPELDLDSEMAACARLVSQRARLAPAALADDRTDLWSLG
Ga0318515_1036320023300031572SoilLDLDGEMAACARLVAARARPAPAVLADDSTDLWSLVRR
Ga0318555_1076665313300031640SoilPELDLDGEMAACARLVSARARPAPSVLADDRTDLWSLARA
Ga0318561_1049582623300031679SoilGDPELDLDGEMAASARLVSARARPAPAVLADEHTDLWSLGRR
Ga0306917_1041714213300031719SoilELDLDDEMAACARLVSARAQAAPAVLADDRTDLWSLAPS
Ga0318494_1017662633300031751SoilELDLDSEMAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0318566_1008331233300031779SoilDPELDADSEMAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0318547_1101967213300031781SoilPELDLDDEMAACGRLVSVRARPAPAMLADDRTDLWSLALTAGS
Ga0318552_1005190513300031782SoilELDADSEMAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0318529_1011678933300031792SoilELDLDGEMAASARLVAARARPAPGVLADERADLWTLTRSL
Ga0318548_1050474123300031793SoilDPELDLDGEMAACACLVSARARVAPGVLADDGTDLWSLARR
Ga0318576_1047674913300031796SoilEMAASARLVAARARPAPAVLADDRTDLWSLAGAEAP
Ga0318550_1062770613300031797SoilDPELDLDGEMAACARLVAARARPAADVLADDRSDLWSLAQR
Ga0318497_1031608423300031805SoilLDTDSEMAACARLVGERAQPEPERLADEAADLWSLLG
Ga0306925_1024420513300031890SoilLDADSEMAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0318520_1009787713300031897SoilDSEMAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0318520_1052076023300031897SoilGDPELDLDSEMAACARLVSQRARLAPAVLADDRTDLWSLG
Ga0318563_1058326413300032009SoilDLDGEMAASASLVSAQARPAPAALADDRTDLWSLGHR
Ga0310911_1019494133300032035SoilDLDGEMAACARLVSARARAAPAVLADDRTDLWSLASKAGS
Ga0318559_1051266223300032039SoilGGDPELDLDGEMAACARLVAARARPAPGVLADDRTDLGGLVG
Ga0318506_1044599713300032052SoilDLDGEMAACAGLVSARARVAPAVLADDRTDLWSLGV
Ga0318504_1002420343300032063SoilDLDGEMAACARLVAARARPAPGVLADDRTDLGGLVG
Ga0318504_1005629933300032063SoilDLDGEMAACAGLVAAQARPAPALLSDESTDLRSLS
Ga0318553_1039946213300032068SoilLDLDGEMAACARLVAARARPAADVLADDRSDLWSLAQR
Ga0306924_1008848063300032076SoilELATDGEMAAAASLVAARARPAPAALADDGTNLWSLGQR
Ga0318525_1002225713300032089SoilSEMAACARLVAARARPAAAALADERTDLWSLADAEAPP
Ga0306920_10352289113300032261SoilGDPELDTDSEMAAGARLVATRARPAPGALADERTDLWSLVHDA
Ga0335071_1131141133300032897SoilLDLDSEMAACARLVSAQARPAPAVLEDERTDLWSLSRG
Ga0335072_1102318223300032898SoilDRDSEMAACTRLVAARARPAPGVLADENTDLWSLA
Ga0335072_1131490613300032898SoilPELDTDGEMAVCARLVSARARPAPAVLADEHTDLWSLS
Ga0335073_1030677013300033134SoilLDGEMAASARLVAAQARPAPAVLADEHTDLWSLTRAGTSS
Ga0335073_1085269223300033134SoilLDLDGELAACARLVAAQARPAPAVLADDRTDLWSLARG
Ga0310914_1069497433300033289SoilDPELDLDGEMAASARLVAARARPAPGVLADERADLWTLTRSL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.